A gene expression estimator of intramuscular fat percentage for use in both cattle and sheep

Background：The expression of genes encoding proteins involved in triacyglyceride and fatty acid synthesis and storage in cattle muscle are correlated with intramuscular fat（IMF）%.Are the same genes also correlated with IMF%in sheep muscle,and can the same set of genes be used to estimate IMF%in both species？Results：The correlation between gene expression（microarray） and IMF%in the longissimus muscle（LM） of twenty sheep was calculated.An integrated analysis of this dataset with an equivalent cattle correlation dataset and a cattle differential expression dataset was undertaken.A total of 30 genes were identified to be strongly correlated with IMF%in both cattle and sheep.The overlap of genes was highly significant,8 of the 13 genes in the TAG gene set and 8 of the 13 genes in the FA gene set were in the top 100 and 500 genes respertively most correlated with IMF%in sheep,P-value = 0.Of the 30 genes,CIDEA,THRSP,ACSM1,DGAT2 and FABP4 had the highest average rank in both species.Using the data from two small groups of Brahman cattle（control and Hormone growth promotant-treated[known to decrease IMF%in muscle]） and 22 animals in total,the utility of a direct measure and different estimators of IMF%（ultrasound and gene expression） to differentiate between the two groups were examined.Directly measured IMF%and IMF%estimated from ultrasound scanning could not discriminate between the two groups.However,using gene expression to estimate IMF%discriminated between the two groups.Increasing the number of genes used to estimate IMF%from one to five significantly increased the discrimination power;but increasing the number of genes to 15 resulted in little further improvement.Conclusion：We have demonstrated the utility of a comparative approach to identify robust estimators of IMF%in the LM in cattle and sheep.We have also demonstrated a number of approaches（potentially applicable to much smaller groups of animals than conventional methods） to using gene expression to rank animals for IMF%within     

Relationship between the expression of key lipogenic enzymes,fatty acid composition,and intramuscular fat content of Limousin and Aberdeen Angus cattle

The amount and fatty acid composition of intramuscular fat (IMF) are major factors in determining the nutritional value of beef. Understanding the mechanisms regulating IMF formation is important for designing strategies for manipulation of IMF quantity and quality. The aim of this study was to investigate the contribution of key lipogenic enzymes towards intramuscular fat formation in Aberdeen Angus and Limousin crossbred steers. This study reports the presence of 150 kDa acetyl-CoA-carboxylase α (ACCα), 150 kDa fatty acid synthase (FAS), 37 kDa stearoyl-CoA desaturase (SCD), 50 kDa Δ6-desaturase (Δ6d), and 50 kDa Δ5-desaturase (Δ5d) immunoreactive bands in cattle muscle (as detected by Western blot analyses). A significant positive relationship was established between ACCα protein content and IMF content; FAS protein content and IMF, as well as between expression of these enzymes and the products of their reactions, saturated fatty acid. IMF level was also positively related to the expression of Δ6d and Δ5d proteins. However, no relationship was found between IMF and the amount of SCD protein. It is suggested that the rate of saturated fatty acids and PUFA biosynthesis might have a significant impact on IMF deposition in cattle.     

Prediction of intramuscular fat by ultrasound in lean cattle

To study the accuracy and precision of intramuscular fat prediction by ultrasound (USIMF) in lean cattle, prediction models were developed based on 325 pure and crossbred beef and dual purpose bulls originating from I) commercial herds (n = 180) and II) a performance test station (n = 145). The bulls were scanned across the 12th thoracic vertebrae using a Pie 200 SLC scanner. Five images were collected per individual bull for later processing in the lab. After slaughter, a 2.5 cm cross-sectional sample located by the 13th thoracic vertebrae was used for chemical analysis to determine intramuscular fat % (CHIMF; Mean 1.25%, SD 0.6%) at the image site. The data were analysed sequentially involving 1) the Total Dataset, 2) Dataset I and 3) Dataset II. Prediction models were developed separately for each dataset, using stepwise regression procedures. The validation model R², RMSE, overall mean bias, SEP, r_P and rank correlations for CHIMF and USIMF based on the best prediction model (Dataset I) were 0.48, 0.46%, − 0.02%, 0.46%, 0.70 and 0.67, respectively. Further improvement in prediction accuracy can probably be achieved by increasing the size of datasets and the CHIMF variation. The results strongly indicate that ultrasound has potential for IMF prediction in lean cattle, although the value in indirect selection of breeding cattle for meat quality needs to be further evaluated.     

Occurrence and antimicrobial resistance of emergent Arcobacter spp. isolated from cattle and sheep in Iran

This study is conducted to determine the occurrence and antimicrobial resistance of Arcobacter spp. isolated from clinically healthy food animals. A total of 308 samples from cattle (200) and sheep (108) were collected from Shiraz slaughterhouse, southern Iran to investigate the presence of the important Arcobacter spp. using cultivation and Polymerase Chain Reaction (PCR) methods. Antimicrobial susceptibility of Arcobacter isolates was determined for 18 antibiotics using disk diffusion method. Among 308 samples, 27 (8.7%) and 44 (14.28%) were positive for the presence of Arcobacter species with cultivation and PCR procedures, respectively. The predominant species was A. butzleri in both cattle (58.33%) and sheep (55%). In addition, concurrent incidence of the species was observed in 25% of the positive samples. All Arcobacter isolates were resistant to rifampicin, vancomycin, ceftriaxone, trimethoprim and cephalothin. The isolates showed high susceptibility to tetracycline, oxytetracycline, erythromycin, ciprofloxacin, kanamycin, amikacin, gentamicin and enrofloxacin. No significant difference among cattle and sheep isolates in resistance pattern was observed. The results indicate that cattle and sheep are significant intestinal carriers for Arcobacter spp. Moreover, tetracycline and aminoglycosides showed great effects on Arcobacter species in antibiogram test and can be used for treatment of human Arcobacter infections.     

Effects of sheep and cattle alternate grazing on sheep parasitism and production

Production of sheep (nursing ewes) grazing alternately with cattle (growing weaned heifers) was compared to the production of sheep or cattle grazing alone (controls). Pasture production and sheep parasitism were also monitored. The herbage allowance was higher for the control heifers than for the alternate heifers, but the leaf to green material ratio (LGMR) was lower, and no difference on heifer growth was revealed (443 vs. 431g.d^-1, P = 0.54). The LGMR was higher for the alternate sheep (+3 points) than for the control sheep, except during the dry season, when the herbage density was lower. The effects of parasitism on the packed cell volume of alternate ewes and lambs were lower than those of control ewes and lambs. However, the infection of sheep by Cooperia sp. (better adapted to cattle) was significantly higher for the alternate sheep than for the controls, and some indication of cattle infection by Haemonchus contortus was suggested. The 70-day lamb weight was higher in the alternate grazing system than in the control (+0.76,+1.11 and+0.61kg for the dry, intermediate and rainy seasons, respectively), and the average 70-day lamb production per ewe exposed was 21.42kg in the alternate grazing system vs. 18.59kg in the control (P = 0.003).     

Repeatability of ultrasound-predicted percentage of intramuscular fat in feedlot cattle.

We used data from 144 bulls, heifers, and steers to determine the repeatability of ultrasound-predicted percentage of intramuscular fat and to study the effect of repeated measurements on the standard error of prediction. Animals were scanned at an average age of 433 d by a certified technician. Individual bulls, heifers, and steers were scanned five to six times each with two Aloka 500-V machines, and the percentage of intramuscular fat was predicted from two regions of interest within an image. Variance components and repeatability values were computed for the overall data and by machine, region of interest, and sex. Animals were broadly divided into two groups based on mean ultrasound-predicted percentage of intramuscular fat. Variance components and repeatability values were then estimated within each group. The overall repeatability of ultrasound-predicted percentage of intramuscular fat was .63 +/- .03. Differences in the repeatability values between machines and between regions of interest were not different from zero (P > .05). Bulls showed a lower within-animal SD of .82% as compared to .97 and 1.02% for steers and heifers, respectively. However, steer ultrasound-predicted percentage of intramuscular fat measures were more repeatable (P < .05) than those of bulls and heifers. The difference in repeatability between bull and heifer measures was not important (P > .05). Animals with mean ultrasound-predicted percentage of intramuscular fat less than 4.79% showed less repeatable measures (P < .05) than those with means above 4.79%. The image variance contributed to nearly 70% of the total variance of observations within an animal. Standard error of animal mean measures showed a 50% reduction when the number of images per animal increased to four. Therefore, we concluded that increasing the number of images per animal plays a more significant role in reducing the standard error of prediction than taking multiple measurements within a single image.     

A serologic investigation of blue tongue virus (BTV) in cattle,sheep and gazella subgutturosa subgutturosa in southeastern turkey

Bluetongue virus (BTV) is a vector-borne disease of ruminants disseminated in the tropic and sub-tropic zone of the world. It is also an important problem in the Middle East. Three serotypes (4–9–16) of the virus have been isolated so far in Turkey. Gazella subgutturosa subgutturosa (Goitred Gazella) is native species of Anatolia. Due to risk of extinction, captured Gazelles have been taken under protection in a restricted area at Ceylanpinar state farm. In this study, the presence of Bluetongue virus (BTV) was investigated serologically in 82 Goitred Gazella, 684 sheep and 100 cattle. Seropositivity rates in Gazella, sheep and cattle were detected as 40.2%, 295% and 88%, respectively.     

Pharmacokinetic disposition of triclabendazole in cattle and sheep; discrimination of the order and the rate of the absorption process of its active metabolite triclabendazole sulfoxide

A comparative pharmacokinetic study was conducted to determine the order and the rate of absorption of triclabendazole (TCBZ) in cattle and sheep. A commercial suspension of TCBZ (Biofasiolex, Biogénesis S.A., Argentina) was administered at a dose rate of 10 mg/kg by the oral route to six Holstein female calves and six Corriedale female sheep. The plasma concentration profiles of the metabolites triclabendazole sulfoxide (TCBZ-SO) and triclabendazole sulfone (TCBZ-SO₂) were analysed by means of the non-compartmental method. The order of the absorption process of the active metabolite, TCBZ-SO, was determined by construction of curves of cumulative absorbed fraction of the drug by means of the Wagner-Nelson method. The appearance of TCBZ-SO in plasma of cattle and sheep resembles the entry of a constant quantity of drug into the organism per unit time. This is explained by the reservoir effect of the rumen, which acts as a biological slow-release system for TCBZ-SO and its precursor TCBZ to the posterior digestive tract where they are absorbed. The plasma concentration profiles of TCBZ-SO in both species were well described by a one-compartment open model with zero-order process of absorption and first-order process of elimination. The values of AUC_0-∞ and C _max of TCBZ-SO did not differ between species, while other kinetic parameters except for λ _z had higher values in calves than in sheep. In the case of TCBZ-SO₂, t _max was the only parameter that did not differ between species, while other kinetic parameters except for λ _z had higher values in calves than in sheep.     

Estimation of genetic parameters for ultrasound-predicted percentage of intramuscular fat in Angus cattle using random regression models

The present study included 3,358 observations of 675 bulls and heifers from the Iowa State University beef cattle breeding project. Data were collected over a 3-yr period between 1998 and 2000. Each year, cattle were scanned four to six times for ultrasound-predicted percentage of intramuscular fat (UPFAT) and other ultrasound traits, starting at a minimum age of 28 wk. The objective of the current study was to estimate variance components, heritability, and repeatability of UPFAT in young bulls and heifers. Data were subjected to random-regression animal models that included fixed effects of contemporary group, fixed Legendre polynomial of age at measurement, and random regression coefficients on Legendre polynomial of age at measurement for animals' direct genetic and direct permanent environmental effects. Phenotypic and genetic models involving different levels of polynomial fit for the animal component were considered. A model fitting a linear effect of Legendre polynomial of age at a measurement for animal direct genetic and direct permanent environmental effects and a homogeneous error variance described the present data adequately. Heritability of UPFAT ranged from 0.32 at 28 wk of age to a maximum of 0.53 at 63 wk. Repeatability of UPFAT increased from a minimum of 0.60 at ages of 28 to 39 wk to a maximum of 0.80 at ages 61 to 63 wk. Heritability and repeatability of yearling UPFAT were 0.50 and 0.71, respectively. With the exception of minor differences at earlier ages, fitting heterogeneous error variances did not have an effect on genetic parameter estimates for most ages of measurement. The present results showed an optimal heritability and repeatability of UPFAT measures around 52 wk and through at least 63 wk of age. This suggested that differences in UPFAT measures during this period also are good measures of differences in marbling genetic potential of Angus cattle.     

Candidate gene expression and intramuscular fat content in pigs

Seventy-two pigs of three genetic groups (Brazilian indigenous breed Piau, Commercial line and Crossbred) of both sexes were slaughtered at four live weights (30, 60, 90 and 120 kg). Intramuscular fat (IMF) content in Longissimus dorsi muscle of each animal was extracted and correlated with candidate gene mRNA expression (ATN1, EEF1A2, FABP3, LDLR, MGP, OBSCN, PDHB, TRDN and RYR1). Within slaughter weight of 120 kg, Piau and Crossbred pigs showed higher IMF content (p < 0.05) than commercial animals, with 2.48, 2.08 and 1.00% respectively. Barrows presented higher values of IMF (p < 0.05) than gilts (1.54 and 1.30% respectively). Gene expression of EEF1A2, FABP3, LDLR, OBSCN, PDHB, TRDN and RYR1 were correlated with IMF (p < 0.05) using the whole dataset. For Piau data only, expression of FABP3, LDLR, MGP, OBSCN, PDHB, TRDN and RYR1 showed correlation with IMF (p < 0.05). Genes that have important roles in lipid transportation inside the cell (FABP3) and tissues (LDLR) showed correlation with IMF of, respectively, 0.68 and 0.63 using the whole data set, and 0.90 and 0.91 using data from Piau animals. The highly positive correlation of the LDLR and FAPB3 expression with IMF content may confirm that these genes are important for fat deposition in the porcine L. dorsi muscle.     

Evaluation of a commercially available enzyme-linked immunosorbent assay for detecting antibodies to Fasciola hepatica and Fasciola gigantica in cattle, sheep and buffaloes in Australia

A commercially available ELISA for detecting antibodies to liver fluke was evaluated for use in Australia. Milk and serum samples from cattle and sheep in which infection with Fasciola hepatica was confirmed by detection of eggs in faeces were used to estimate sensitivity. Similar samples collected from cattle and sheep outside the F. hepatica-endemic area were used to estimate specificity. The ELISA was also evaluated for detecting antibodies to F. hepatica in milk from sheep and antibodies to Fasciola gigantica in sera from cattle and buffaloes, but with small numbers of samples. In cattle, the sensitivity and specificity of the ELISA were 98.2% and 98.3% using serum and 97.7% and 99.3% using milk. In infected herds, 41.4% and 41.5% of animals were positive in the serum and milk ELISAs, respectively, whereas F. hepatica eggs were found in faecal samples from 26.5% of animals. In sheep, the sensitivity of the ELISA was 96.9% and the specificity was 99.4%. In infected flocks, 60.2% of animals were positive in the serum ELISA and F. hepatica eggs were found in faecal samples 52.2% of animals. There was perfect agreement in the ELISA between paired serum and milk samples collected from ewes. The assay detected antibodies in sera from cattle and buffaloes with natural and experimental F. gigantica infections. In the experimentally infected animals, antibodies were detected 2 weeks post-infection. We conclude that the ELISA will be a valuable tool for diagnosing F. hepatica infections in cattle and sheep. The assay may also be useful for diagnosing F. gigantica infections but further studies are required to establish sensitivity and specificity.     

肉牛肌内脂肪沉积相关基因的研究

相关基因对肌内脂肪含量的影响,已引起国内外研究人员的广泛关注,尤其是高档肉牛的育种方面。本文就影响肌内脂肪沉积的几个相关基因的发现、表达部位以及对肉牛肌内脂肪沉积的影响进行了综述和展望。     

Behaviour of goats, sheep and cattle on natural pasture in the sub-humid zone of West Africa

The behaviour of sheep, goats and cattle on a shrub and tree savannah in the sub-humid zone of West Africa was studied during the dry (February to May), rainy (June to September) and cool season (October to January). Two mature females per animal species were followed by two observers during 3 days per month and behaviour activities were recorded every 15 min of the daily grazing time. When browsing, the plant name, plant part and plant height reached during prehension were recorded. The distance travelled and the grazing circuits were recorded with a step counter and a Geographic Position System device. The knowledge of farmers concerning appreciated browse species relative to the browse species consumed by animals in the area was also investigated.

During the dry season sheep, goats and cattle spent around 25% of their time browsing and 20%, 16% and 31%, respectively, of their time grazing. During the cool season, goats (17%) browsed more than sheep (7%) and cattle (5%) (P < 0.05). During the rainy season, sheep browsed 20% of the time while cattle spent only 7% of their time browsing, while goats were tied, with no opportunity for browsing. Browsing leaves was the most important part of the browsing activity. During the cool season, browsing height was the same (1.0 m) for cattle and goats, but lower for sheep (0.6 m) (P < 0.05). In the dry and cool season, sheep and goats walked shorter distances than cattle.

The plant species with the highest frequency of consumption were Acacia dudgeoni Craib, Ficus gnaphalocarpa (Miq.) A. Rich, Dioscorea togoensis Knuth, Cordia myxa L., and Manguifera indica L. for sheep and goats and Afzelia africana Sm., Kaya senegalensis (Desv.) A. Juss, Pterocarpus erinaceus Poir. and Dicrostachys cinerea (L.) Wight and Arn. for cattle. Species with a high frequency of citation by farmers were A. africana (92%), K. senegalensis (88%), P. erinaceus (86%), Faidherbia albida A. Chevalier (80%), A. dudgeoni (70%) and F. gnaphalocarpa (69%).

In conclusion, browse species make an important contribution to the diet of ruminant animals in the sub-humid zone and farmers are familiar with the species consumed by ruminant animals.     

Identification, characterization and expression analysis of hepcidin gene in sheep

Hepcidin is part of the innate immune system, and it plays a central role in the regulation of iron homeostasis. This peptide has been previously characterized in man, non-human primates, rat, mouse, dog, swine, cattle, horse, fishes, reptiles and birds but until now not in sheep. The aim of this study was to sequence, characterize and perform hepcidin expression analysis in different tissues collected from healthy sheep. The resulting open reading frame consisted of 249 bp predicted to encode an 82 aa peptide with a putative 23 aa signal peptide, a 34 aa pro-region and the 25 aa mature hepcidin. The deduced sequence of the sheep hepcidin precursor was most homologous to Bos taurus and Bubalus bubalis. Hepcidin was predominantly expressed in liver, although high expression was present in abomasum and lower level expression occurred in other tissues. These findings extend our comparative knowledge showing the relationship of sheep hepcidin to other mammalian hepcidins and will be helpful for additional studies on iron metabolism and inflammatory processes in sheep.     

Pharmacokinetics after intravenous, intramuscular and subcutaneous administration of difloxacin in sheep

The disposition kinetics of difloxacin, a fluoroquinolone antibiotic, after intravenous (IV), intramuscular (IM) and subcutaneous (SC) administration were determined in sheep at a single dose of 5mg/kg. The concentration-time data were analysed by compartmental (after IV dose) and non-compartmental pharmacokinetics method (after IV, IM and SC administration). Plasma concentrations of difloxacin were determined by high performance liquid chromatography with fluorescence detection. Steady-state volume of distribution (V(ss)) and clearance (Cl) of difloxacin after IV administration were 1.68+/-0.21L/kg and 0.21+/-0.03L/hkg, respectively. Following IM and SC administration difloxacin achieved maximum plasma concentration of 1.89+/-0.55 and 1.39+/-0.14mg/L at 2.42+/-1.28 and 5.33+/-1.03h, respectively. The absolute bioavailabilities after IM and SC routes were 99.92+/-26.50 and 82.35+/-25.65%, respectively. Based on these kinetic parameters, difloxacin is likely to be effective in sheep.     

Genetic parameters for intramuscular fat percentage, marbling score, scrotal circumference, and heifer pregnancy in Red Angus cattle

Selection criteria for yearling bulls commonly include indicators of fertility and carcass merit, such as scrotal circumference (SC) and intramuscular fat percentage (IMF). Genetic correlation estimates between ultrasound traits such as IMF and carcass marbling score (MS) with fertility traits SC and heifer pregnancy (HP) have not been reported. Therefore, the objective of this study was to estimate the genetic parameters among the indicator traits IMF and SC, and the economically relevant traits MS and HP. Records for IMF (n=73,051), MS (n=15,260), SC (n=43,487), and HP (n=37,802) were obtained from the Red Angus Association of America, and a 4-generation ancestral pedigree (n=10,460) was constructed from the 8,915 sires represented in the data. (Co)variance components were estimated using a multivariate sire model and average information REML to obtain estimates of heritability and genetic correlations. Fixed effects included contemporary group and the linear effect of age at measurement for all traits, and an additional effect of age of dam for both HP and SC. The random effect of sire was included to estimate additive genetic effects, which were assumed to be continuous for IMF, MS, and SC, but a probit threshold link function was fitted for HP. Generally moderate heritability estimates of 0.29 ± 0.01, 0.35 ± 0.06, 0.32 ± 0.02, and 0.17 ± 0.01 were obtained for IMF, MS, SC, and HP on the underlying scale, respectively. The confidence interval for the estimated genetic correlation between MS and HP (0.10 ± 0.15) included zero, suggesting a negligible genetic association. The genetic correlation between MS and IMF was high (0.80 ± 0.05), but the estimate for HP and SC (0.05 ± 0.09) was near zero, as were the estimated genetic correlations of SC with MS (0.01 ± 0.08) and IMF (0.05 ± 0.06), and for HP with IMF (0.13 ± 0.09). These results suggest that concomitant selection for increased fertility and carcass merit would not be antagonistic.     

Cardiovascular and haemodynamic effects of intramuscular doses of xylazine in conscious sheep

OBJECTIVE: To determine if a commonly used analgesic dose of xylazine has detrimental cardiovascular or haemodynamic effects in sheep. DESIGN: A physiological study following intramuscular administration of xylazine. PROCEDURE: Xylazine (50 micrograms/kg) was injected intramuscularly into six healthy Merino ewes. For 60 min heart rate, mean arterial blood pressure and cardiac output were recorded; arterial blood samples for the measurement of blood gas tensions were also collected. RESULTS: There were no significant changes in heart rate, mean arterial blood pressure, cardiac output or arterial carbon dioxide tension. A slight degree of arterial hypoxaemia was noted with a 10% reduction in arterial oxygen tension values at 30 min. CONCLUSION: The minimal changes to cardiovascular and respiratory values in this study verify the safety of previously suggested analgesic dosing regimens for sheep. Previously reported hypoxaemic effects in sheep as a result of intravenous xylazine administration appear to be reduced as a result of intramuscular administration.     

Pharmacokinetics after intravenous, intramuscular and subcutaneous administration of moxifloxacin in sheep

The disposition kinetics of moxifloxacin, a fluoroquinolone antibiotic, after intravenous (IV), intramuscular (IM) and subcutaneous (SC) administration was determined in sheep at a single dose of 5 mg/kg. The concentration-time data were analysed by compartmental (after IV dose) and non-compartmental (after IV, IM and SC administration) pharmacokinetic methods. Plasma concentrations of moxifloxacin were determined by high performance liquid chromatography with fluorescence detection. Steady-state volume of distribution (V_ss) and clearance (Cl) of moxifloxacin after IV administration were 2.03 ± 0.36 L/kg and 0.39 ± 0.04 L/h kg, respectively. Following IM and SC administration, moxifloxacin achieved maximum plasma concentration of 1.66 ± 0.62 mg/L and 0.90 ± 0.19 mg/L at 2.25 ± 0.88 h and 3.25 ± 1.17 h, respectively. The absolute bioavailabilities after IM and SC routes were 96.12 ± 32.70% and 102.20 ± 23.76%, respectively. From these data (kinetic parameters and absence of adverse reactions) moxifloxacin may be a potentially useful antibiotic in sheep.