Mechanisms behind the stimulation of nitrification by N input in subtropical acid forest soil

Purpose

Input of N as NH₄ ⁺ is known to stimulate nitrification and to enhance the risk of N losses through NO₃ ^? leaching in humid subtropical soils. However, the mechanisms responsible for this stimulation effect have not been fully addressed.

Materials and methods

In this study, an acid subtropical forest soil amended with urea at rates of 0, 20, 50, 100 mg N kg^?1 was pre-incubated at 25 °C and 60 % water-holding capacity (WHC) for 60 days. Gross N transformation rates were then measured using a ¹⁵N tracing methodology.

Results and discussion

Gross rates of mineralization and nitrification of NH₄ ⁺-N increased (P?<?0.05), while gross rate of NO₃ ^? immobilization significantly decreased with increasing N input rates (P?<?0.001). A significant relationship was established between the gross nitrification rate of NH₄ ⁺ and the gross mineralization rate (R ²?=?0.991, P?<?0.01), so was between net nitrification rate of NH₄ ⁺ and the net mineralization rate (R ²?=?0.973, P?<?0.05).

Conclusions

Stimulation effect of N input on the gross rate of nitrification of NH₄ ⁺-N in the acid soil, partially, resulted from stimulation effect of N input on organic N mineralization, which provides pH-favorable microsites for the nitrification of NH₄ ⁺ in acid soils (De Boer et al., Soil Biol Biochem 20:845–850, 1988; Prosser, Advan Microb Physiol 30:125–181, 1989). The stimulated gross nitrification rate with the decreased gross NO₃ ^? immobilization rate under the elevated N inputs could lead to accumulation of NO₃ ^? and to enhance the risk of NO₃ ^? loss from humid forest soils.

     

Geographic distance and amorphous iron affect the abundance and distribution of <Emphasis Type="Italic">Geobacteraceae</Emphasis> in paddy soils in China

Purpose

Geobacteraceae are important dissimilatory Fe (III)-reducing microorganisms, influencing the cycling of metals, nutrients as well as the degradation of organic contaminants. However, little is known about their distribution, diversity, and abundance of Geobacteraceae and the effects of environment factors and geographic distance on the distribution and diversity of Geobacteraceae in paddy soils remain unclear. Therefore, the objectives of this study were to investigate the distribution, diversity, and abundance of Geobacteraceae in paddy soils and to determine key factors in shaping the Geobacteraceae distribution, environmental factors, geographic distance, or both and to quantify their contribution to Geobacteraceae variation.

Materials and methods

Illumina sequencing and quantitative real-time PCR using a primer set targeting 16S rRNA genes of bacteria affiliated with the family Geobacteraceae were employed to measure the community composition, diversity, and abundance patterns of 16S rRNA genes of Geobacteraceae in 16 samples collected from north to south of China. MRT, Mantel test, and VPA were used to analyze the relationship between communities of Geobacteraceae and environmental factors and geographic distance.

Results and discussion

Quantitative PCR showed that the abundance of 16S rRNA genes of Geobacteraceae ranged from (1.20?±?0.18)?×?10⁸ to 1.13?×?10⁹?±?2.25?×?10⁸ copies per gram of soil (dry weight) across different types of soils. Illumina sequencing results showed Geobacter was the dominant genus within the family of Geobacteraceae. Multivariate regression tree (MRT) analysis showed that soil amorphous iron contributed more (22.46 %) to the variation of dominant species of Geobacteraceae than other examined soil chemical factors such as pH (14.52 %), ammonium (5.12 %), and dissolved organic carbon (4.74 %). Additionally, more geographically distant sites harbored less similar communities. Variance partitioning analysis (VPA) showed that geographic distance contributed more to the variation of Geobacteraceae than any other factor, although the environmental factors explained more variation when combined. So, we detected the uneven distribution of Geobacteraceae in paddy soils of China and demonstrated that Geobacteraceae community composition was strongly associated with geographic distance and soil chemical factors including aFe, pH, Fe, DOC, C:N, and NO₃ ^?-N. These results greatly expand the knowledge of the distribution of Geobacteraceae in environments, particularly in terrestrial ecosystems.

Conclusions

Our results showed that geographic distance and amorphous iron played important roles in shaping Geobacteraceae community composition and revealed that both geographic distance and soil properties governed Geobacteraceae biogeography in paddy soils. Our findings will be critical in facilitating the prediction of element cycling by incorporating information on functional microbial communities into current biogeochemical models.

     

Plant–soil interaction affects the mineralization of soil organic carbon: evidence from 73-year-old plantations with three coniferous tree species in subtropical Australia

Purpose

Plantation is an important strategy for forest restoration and carbon (C) storage. Plantations with different tree species could significantly affect soil properties, including soil pH, soil nutrient content, soil microbial activities, and soil dissolved organic C. Changes in these abiotic and biotic factors could regulate mineralization of soil organic C (SOC). However, it remains unclear to what extent these factors affect the mineralization of SOC under different tree species plantations.

Materials and methods

Soil was collected at 0–10 cm depth from plantations with Pinus elliottii Engelm. var. elliottii, Araucaria cunninghamii, and Agathis australis, respectively, in southeast Queensland, Australia. Soil samples were assayed for soil organic C; organic N and mineralization of SOC; soil particle size; total C, N, and P; and pH. In addition, a 42-day laboratory incubation with substrate additions was done to examine the influence of different substrates and their combinations on bio-available organic C.

Results and discussion

Our results suggested that SOC mineralization was mainly determined by soil pH and soil C content among plantations with different tree species, whereas SOC mineralization was not correlated with soil N and P contents. These results were further confirmed by the substrate addition experiments. SOC mineralization of soils from slash pine showed greater response to C (glucose) addition than soils from other two plantations, which suggested significant differences in SOC mineralization among plantations with different tree species. However, neither N addition nor P addition had significant effects on SOC mineralization.

Conclusions

Our results indicated that plantations with different tree species substantially affect the mineralization and stability of soil organic C pool mainly by soil pH and soil C content.

     

Differential influence of four invasive plant species on soil physicochemical properties in a pot experiment

Purpose

This study compared the effects of four invasive plants, namely Impatiens glandulifera, Reynoutria japonica, Rudbeckia laciniata, and Solidago gigantea, as well as two native species—Artemisia vulgaris, Phalaris arundinacea, and their mixture on soil physicochemical properties in a pot experiment.

Materials and methods

Plants were planted in pots in two loamy sand soils. The soils were collected from fallows located outside (fallow soil) and within river valley (valley soil) under native plant communities. Aboveground plant biomass, cover, and soil physicochemical properties such as nutrient concentrations, pH, and water holding capacity (WHC) were measured after two growing seasons. Discriminant analysis (DA) was used to identify soil variables responsible for the discrimination between plant treatments. Identified variables were further compared between treatments using one-way ANOVA followed by Tukey’s HSD test.

Results and discussion

Plant biomass, cover, and soil parameters depended on species and soil type. DA effectively separated soils under different plant species. DA on fallow soil data separated R. laciniata from all other treatments, especially I. glandulifera, native species and bare soil, along axis 1 (related mainly to exchangeable K, N-NH₄, total P, N-NO_3, and WHC). Large differences were found between R. laciniata and S. gigantea as indicated by axis 2 (S-SO₄, exchangeable Mg, total P, exchangeable Ca, and total Mg). DA on valley soil data separated R. japonica from all other treatments, particularly S. gigantea, R. laciniata, and native mixture, along axis 1 (N-NO₃, total N, S-SO₄, total P, pH). Along axis 2 (N-NO₃, N-NH₄, Olsen P, exchangeable K, WHC), large differences were observed between I. glandulifera and all other invaders.

Conclusions

Plant influence on soil differed both among invasive species and between invasive and native species. Impatiens glandulifera had a relatively weak effect and its soil was similar to both native and bare soils. Multidirectional effects of different invaders resulted in a considerable divergence in soil characteristics. Invasion-driven changes in the soil environment may trigger feedbacks that stabilize or accelerate invasion and hinder re-colonization by native vegetation, which has implications for the restoration of invaded habitats.

     

Ecological effects of rice-duck integrated farming on soil fertility and weed and pest control

Purpose

This paper aims to study the ecological effects of rice-duck integrated farming on soil fertility and weed and pest control.

Materials and methods

A field experiment was carried out in the suburb of Shanghai in 2014, which included a rice-duck integrated treatment and non-duck treatment (CK) under organic management. Each treatment was in triplicate, and the experiment included six plots in total, with each plot 667 m² in area.

Results and discussion

(1) The number of weeds in the plots with the duck treatment was significantly lower than that with CK (p?<?0.01). (2) The incidence of stem borers (Chilo suppressalis) with the duck treatment was significantly lower than that with CK (p?<?0.05). The incidences of rice leaf rollers (Cnaphalocrocis medinalis), rice sheath blight (Rhizoctonia solani), and planthoppers with the duck treatment were extremely significantly lower than those with CK (p?<?0.01). (3) The contents of NH₄ ⁺-N, alkali-hydrolyzable N, available P, and available K in the soils with the duck treatment were higher than those with CK, and the activities of urease, phosphatase, sucrase, and catalase in the soils with the duck treatment were also much higher than those with CK. The grain yield with the duck treatment was 1.9 times that with CK. (4) The number of soil nematodes with the duck treatment was significantly higher than that with CK in the late rice growing stage (p?<?0.01).

Conclusions

Raising ducks in the paddy fields not only showed a potential of controlling weed hazards and reducing rice pests and diseases but also raised soil fertility, improved soil biodiversity, and increased grain yield effectively. Implementing the rice-duck integrated farming could highly reduce the amount of pesticides and herbicides and was beneficial to develop the organic rice farming in the suburbs of Shanghai, Southeast China.

     

Combined biochar and nitrogen fertilizer reduces soil acidity and promotes nutrient use efficiency by soybean crop

Purpose

Soil acidification is universal in soybean-growing fields. The aim of our research was to evaluate the effects of soil additives (N fertilizers and biochar) on crop performance and soil quality with specific emphasis on ameliorating soil acidity.

Materials and methods

Four nitrogen treatments were applied as follows: no nitrogen (N0), urea (N1), potassium nitrate (N2), and ammonium sulfate (N3), each providing 30 kg N ha^?1. Half plot area of the N1, N2, and N3 treatments was also treated with biochar (19.5 t ha^?1) to form N-biochar treatments (N1C, N2C, N3C). Both bulk and rhizosphere soils were sampled separately for the following analyses: pH, exchangeable base cations (EBC), exchangeable acidity (EA), total inorganic N (IN), total N (TN), and microbial phospholipid fatty acids (PLFAs). Soybean biomass and nutrient contents were also determined. Correlation analysis was applied to analyze the relationships between soil chemical properties and soybean plant parameters.

Results and discussion

With N-biochar additions (N1C, N2C, N3C), soil chemical properties changed as follows: pH increased by 0.6–1.2 units, EBC, IN, and TN increased by 175–419, 38.5–54.7, and 136–452 mg kg^?1, respectively, and PLFAs increased by 23.6–40.9 nmol g^?1 compared to the N0 in the rhizosphere. Microbial PLFAs had positive correlations with soil pH; EBC; exchangeable K, Ca, Na, and Mg; TN; IN; NH₄ ⁺; and NO₃ ^? (r?=?0.66–0.84, p?<?0.01). There were negative correlations between PLFAs and EA or exchangeable Al (r?=??0.64, ?0.66, p?<?0.01), which indicated that the additives increased microbial biomass by providing a suitable environment with less acid stress and more nutrients. The additives increased soil NH₄ ⁺ and NO₃ ^? by promoting soil organic N mineralization and reducing NH₄ ⁺ and NO₃ ^? leaching. Moreover, the soybean seed biomass and the nutrient contents in seeds increased with N-biochar additions, especially in the N3C treatment.

Conclusions

N-biochar additions were effective in ameliorating soil acidity, which improved the microenvironment for more microbial survival. N-biochars influenced N transformations at the plant–soil interface by increasing organic N mineralization, reducing N leaching, and promoting N uptake by soybeans. The soil additive ammonium and biochar (N3C) were best in promoting soybean growth.

     

Abundance of transcripts of functional gene reflects the inverse relationship between CH<Subscript>4</Subscript> and N<Subscript>2</Subscript>O emissions during mid-season drainage in acidic paddy soil

Agricultural management significantly affects methane (CH₄) and nitrous oxide (N₂O) emissions from paddy fields. However, little is known about the underlying microbiological mechanism. Field experiment was conducted to investigate the effect of the water regime and straw incorporation on CH₄ and N₂O emissions and soil properties. Quantitative PCR was applied to measure the abundance of soil methanogens, methane-oxidising bacteria, nitrifiers, and denitrifiers according to DNA and mRNA expression levels of microbial genes, including mcrA, pmoA, amoA, and nirK/nirS/nosZ. Field trials showed that the CH₄ and N₂O flux rates were negatively correlated with each other, and N₂O emissions were far lower than CH₄ emissions. Drainage and straw incorporation affected functional gene abundance through altered soil environment. The present (DNA-level) gene abundances of amoA, nosZ, and mcrA were higher with straw incorporation than those without straw incorporation, and they were positively correlated with high concentrations of soil exchangeable NH₄⁺ and dissolved organic carbon. The active (mRNA-level) gene abundance of mcrA was lower in the drainage treatment than in continuous flooding, which was negatively correlated with soil redox potential (Eh). The CH₄ flux rate was significantly and positively correlated with active mcrA abundance but negatively correlated with Eh. The N₂O flux rate was significantly and positively correlated with present and active nirS abundance and positively correlated with soil Eh. Thus, we demonstrated that active gene abundance, such as of mcrA for CH₄ and nirS for N₂O, reflects the contradictory relationship between CH₄ and N₂O emissions regulated by soil Eh in acidic paddy soils.     

Increases in soil CO<Subscript>2</Subscript> and N<Subscript>2</Subscript>O emissions with warming depend on plant species in restored alpine meadows of Wugong Mountain,China

Purpose

Ecosystem restorations can impact carbon dioxide (CO₂) and nitrous oxide (N₂O) emissions which are important greenhouse gasses. Alpine meadows are degraded worldwide, but restorations are increasing. Because their soils represent large carbon (C) and nitrogen (N) pools, they may produce significant amounts of CO₂ and N₂O depending on the plant species used in restorations. In addition, warming and N deposition may impact soil CO₂ and N₂O emissions from restored meadows.

Materials and methods

We collected soils from degraded meadows and plots restored using three different plant species at Wugong Mountain (Jiangxi, China). We measured CO₂ and N₂O emissions when soils were incubated at different temperatures (15, 25 or 35 °C) and levels of N addition (control vs. 4 g m^?2) to understand their responses to warming and N deposition.

Results and discussion

Dissolved organic C was higher in restored plots (especially with Fimbristylis dichotoma) compared to non-restored bare soils, and their soil inorganic N was lower. CO₂ emission rates were increased by vegetation restorations, decreased by N deposition, and increased by warming. CO₂ emission rates were similar for the three grass species at 15 and 25 °C, but they were lower with Miscanthus floridulus at 35 °C. Soils from F. dichotoma and Carex chinensis plots had higher N₂O emissions than degraded or M. floridulus plots, especially at 25 °C.

Conclusions

These results show that the effects of restorations on soil greenhouse gas emissions depended on plant species. In addition, these differences varied with temperature suggesting that future climate should be considered when choosing plant species in restorations to predict soil CO₂ and N₂O emissions and global warming potential.

     

Alpine meadow restorations by non-dominant species increased soil nitrogen transformation rates but decreased their sensitivity to warming

Purpose

Alpine meadow soils are large carbon (C) and nitrogen (N) pools correlated significantly with global C and N cycling. Soil N transformations, including nitrification and N mineralization, are key processes controlling N availability. Alpine meadow degradations are common worldwide, and vegetation restorations have been widely implemented. However, grass species used for restorations may alter soil N transformations or their response to warming and N deposition due to divergent plant traits and their different effects on soil characteristic. To understand the effects of meadow restorations by non-historically dominant species on N transformations, we measured N transformation rates in restored soils and control soils under the context of warming and N deposition.

Materials and methods

We collected soils from plots restored by dominant (Miscanthus floridulus) and non-dominant species (including Carex chinensis and Fimbristylis dichotoma) and non-restored plots in alpine meadows of Wugong Mountain, China. We measured nitrification and N mineralization rates when soils were incubated at different temperature (15 or 25 °C) and N additions (control vs. 4 g m^?2) to examine their responses to restoration species, warming, and N.

Results and discussion

Vegetation restored soils differed substantially from non-restored bare soils. Total N, total organic C, pH, and dissolved organic C contributed the most to the separation. Restoration altered soil N transformations substantially, even though the effects varied among restoration species. Specifically, non-historically dominant species accelerated N transformations, while the originally dominant species decreased N transformations. In addition, sensitivity of nitrification to warming in restored soils was decreased by restorations. Soils restored by originally dominant species were higher in sensitivity of N transformations to warming than those restored by the other two species. Warming increased nitrification rates by 45.5 and 17.4 % in bare soils and restored soils, respectively. Meanwhile, N mineralization rates were increased by 52.8 and 21.9 %, respectively.

Conclusions

Vegetation restoration of the degraded meadows impacted N transformations and their sensitivity to warming. The effects varied with identity of the restoration species, suggesting that grass species should be considered in future restorations of degraded meadows in terms of their divergent effects on N transformations and sensitivity to warming.

     

Contrasting response of two grassland soils to N addition and moisture levels: N<Subscript>2</Subscript>O emission and functional gene abundance

Purpose

Nitrification and denitrification processes dominate nitrous oxide (N₂O) emission in grassland ecosystems, but their relative contribution as well as the abiotic factors are still not well understood.

Materials and methods

Two grassland soils from Duolun in Inner Mongolia, China, and Canterbury in New Zealand were used to quantitatively compare N₂O production and the abundance of bacterial and archaeal amoA, denitrifying nirK and nirS genes in response to N additions (0 and 100 μg NH₄ ⁺–N g^?1 dry soil) and two soil moisture levels (40 and 80 % water holding capacity) using microcosms.

Results and discussion

Soil moisture rather than N availability significantly increased the nitrification rate in the Duolun soil but not in the Canterbury soil. Moreover, N addition promoted denitrification enzyme activities in the Canterbury soil but not in the Duolun soil. The abundance of bacterial and archaeal amoA genes significantly increased as soil moisture increased in the Duolun soil, whereas in the Canterbury soil, only the abundance of bacterial amoA gene increased. The increase in N₂O flux induced by N addition was significantly greater in the Duolun soil than in the Canterbury soil, suggesting that nitrification may have a dominant role in N₂O emission for the Duolun soil, while denitrification for the Canterbury soil.

Conclusions

Microbial processes controlling N₂O emission differed in grassland soils, thus providing important baseline data in terms of global change.

     

Nitrogen transformation rates and N<Subscript>2</Subscript>O producing pathways in two pasture soils

Purpose

Better understanding of N transformations and the regulation of N₂O-related N transformation processes in pasture soil contributes significantly to N fertilizer management and development of targeted mitigation strategies.

Materials and methods

¹⁵N tracer technique combined with acetylene (C₂H₂) method was used to measure gross N transformation rates and to distinguish pathways of N₂O production in two Australian pasture soils. The soils were collected from Glenormiston (GN) and Terang (TR), Victoria, Australia, and incubated at a soil moisture content of 60% water-filled pore space (WFPS) and at temperature of 20 °C.

Results and discussion

Two tested pasture soils were characterized by high mineralization and immobilization turnover. The average gross N nitrification rate (n_tot) was 7.28 mg N kg^?1 day^?1 in TR soil () and 5.79 mg N kg^?1 day^?1 in GN soil. Heterotrophic nitrification rates (n_h), which accounting for 50.8 and 41.9% of n_tot, and 23.4 and 30.1% of N₂O emissions in GN and TR soils, respectively, played a role similar with autotrophic nitrification in total nitrification and N₂O emission. Denitrification rates in two pasture soils were as low as 0.003–0.004 mg N kg^?1 day^?1 under selected conditions but contributed more than 30% of N₂O emissions.

Conclusions

Results demonstrated that two tested pasture soils were characterized by fast N transformation rates of mineralization, immobilization, and nitrification. Heterotrophic nitrification could be an important NO₃^?–N production transformation process in studied pasture soils. Except for autotrophic nitrification, roles of heterotrophic nitrification and denitrification in N₂O emission in two pasture soils should be considered when developing mitigation strategies.

     

pH change, carbon and nitrogen mineralization in paddy soils as affected by Chinese milk vetch addition and soil water regime

Purpose

The aim of the research was to explore the effect of Chinese milk vetch (CM vetch) addition and different water management practices on soil pH change, C and N mineralization in acid paddy soils.

Materials and methods

Psammaquent and Plinthudult paddy soils amended with Chinese milk vetch at a rate of 12 g?kg^?1 soil were incubated at 25 °C under three different water treatments (45 % field capacity, CW; alternating 1-week wetting and 2-week drying cycles, drying rewetting (DRW) and waterlogging (WL). Soil pH, dissolved organic carbon, dissolved organic nitrogen (DON), CO₂ escaped, microbial biomass carbon, ammonium (NH₄ ⁺) and nitrate (NO₃ ^?) during the incubation period were dynamically determined.

Results and discussion

The addition of CM vetch increased soil microbial biomass concentrations in all treatments. The CM vetch addition also enhanced dissolved organic N concentrations in all treatments. The NO₃–N concentrations were lower than NH₄–N concentrations in DRW and WL. The pH increase after CM vetch addition was 0.2 units greater during WL than DRW, and greater in the low pH Plinthudult (4.59) than higher pH Paleudalfs (6.11) soil. Nitrogen mineralization was higher in the DRW than WL treatment, and frequent DRW cycles favored N mineralization in the Plinthudult soil.

Conclusions

The addition of CM vetch increased soil pH, both under waterlogging and alternating wet–dry conditions. Waterlogging decreased C mineralization in both soils amended with CM vetch. Nitrogen mineralization increased in the soils subjected to DRW, which was associated with the higher DON concentrations in DRW than in WL in the acid soil. Frequent drying–wetting cycles increase N mineralization in acid paddy soils.     

Effects of rice cropping intensity on soil nitrogen mineralization rate and potential in buried ancient paddy soils from the Neolithic Age in China’s Yangtze River Delta

Purpose

Rice cropping density, rice cropping duration, and fertilization can affect soil nitrogen (N) supply, but rice cropping intensity (RCI) on soil N fertility is not fully understood, particularly for ancient paddy soils without N fertilization.

Materials and methods

Eight buried ancient paddy soils from the Neolithic Age in China’s Yangtze River Delta, and its parent material, and seven present paddy soils in the same fields were used to investigate the effects of RCI on soil nitrogen mineralization rate and potential. In the present study, concentration of phytolith of rice in soils was used to indicate the RCI.

Results and discussion

Soil N content was obviously greater in the buried Neolithic paddy soils than in the parent material. Total soil N increased with increasing phytolith from 5,200 to 60,000 pellets g^?1, but tended to decrease with increasing phytolith from 60,000 to 105,000 pellets g^?1. A possible reason for RCI-induced increase of soil N was due to biological N₂ fixation in the rice field because there was a significant negative relationship between total N and δ¹⁵N in the buried Neolithic soils. The mineralization rate constant (k) ranged from 0.0126 to 0.0485 d^?1 with an average of 0.0276 d^?1, which was similar to that of the parent material, but lower than those in the present paddy soils. The k value increased with increasing RCI in the Neolithic paddy soils. There was a significant positive relation between RCI and the percentage of cumulative mineralizable N in the 14 d of that within 103 d incubation.

Conclusions

Soil N content tended to increase with the increasing intensity of rice cropping and then decreased under the high intensity of rice cropping; the excessive high intensification of rice cropping could facilitate fast N mineralization (labile N) fraction in the cumulated mineralized N. The unfertilized paddy field could only meet soil N supply under the low intensification of cropping rice in the Neolithic Age. The N fertilization is necessary in order to improve soil fertility for sustaining the present high-yield rice production.     

Bacterivore nematodes stimulate soil gross N transformation rates depending on their species

We conducted a microcosm experiment with soil being sterilized, reinoculated with native microbial community and subsequently manipulated the bacterivorous nematodes, including three treatments: without (CK) or with introducing one species of the two bacterivores characterized with different body size but similar c-p (colonizer-persister) value (Rhabditis intermedia and Protorhabditis oxyuroides, accounted for 6 and 59% of bacterivores in initially undisturbed soil, respectively). We monitored the N₂O and CO₂ emissions, soil properties, and especially quantified gross N transformation rates using ¹⁵N tracing technique after the 50 days incubation. No significant differences were observed on soil NH₄ ⁺ and NO₃ ^? concentrations between the CK and two bacterivores, but this was not the case for gross N transformation rates. In comparison to CK, R. intermedia did not affect soil N transformation rates, while P. oxyuroides significantly increased the rates of mineralization of organic N to NH₄ ⁺, oxidation of NH₄ ⁺ to NO₃ ^?, immobilization of NO₃ ^? to organic N and dissimilatory NO₃ ^? reduction to NH₄ ⁺. Furthermore, the mean residence time of NH₄ ⁺ and NO₃ ^? pool was greatly lowered by P. oxyuroides, suggesting it stimulated soil N turnover. Such stimulatory effect was unrelated to the changes in abundance of bacteria and ammonia-oxidizing bacteria (AOB). In contrast to CK, only P. oxyuroides significantly promoted soil N₂O and CO₂ emissions. Noticeably, bacterivores increased the mineralization of recalcitrant organic N but decreased soil δ¹³C_-TOC and δ¹⁵N_-TN values, in particular for P. oxyuroides. Combining trait-based approach and isotope-based analysis showed high potential in moving forward to a mechanistic understanding of bacterivore-mediated N cycling.     

Land use affects soil organic carbon of paddy soils: empirical evidence from 6280 years BP to present

Purpose

Submerged rice cultivation has been practiced in China for 7000 years. Empirical evidence on changes of soil organic carbon (SOC) contents in paddy soils over this historical time period is scarce. Therefore, a field study was conducted to investigate the effect of submerged rice cultivation on the accumulation and preservation of SOC in paddies.

Materials and methods

Two buried ancient paddy profiles (6280 years BP, named P-01 and P-03) in the Yangtze Delta of eastern China were excavated to illustrate the development of SOC contents in soils during the evolution of paddies under anthropogenic land use and environmental changes from the prehistoric period to the present time. Trends in SOC concentrations, total nitrogen concentrations, and stable carbon isotope ratio were identified for different points in time.

Results and discussion

Accumulation of organic carbon was found in the paddy soil layers of P-01 at 100–174 cm depth. This site was taken under submerged rice cultivation in about 6280 years BP. The average SOC concentration in the prehistoric paddy topsoil in 100–130 cm depth was 1.27 %, which is seven times higher than that in the adjacent uncultivated land at 103–130 cm depth of P-03. This implies that the paddy soil has experienced substantial CO₂ sequestration under submerged management during that time. By about 3320 years BP, organic carbon contents were halved, potentially due to marine inundation by sea level rise. Up to the year 2003, the SOC contents in all horizons in the present time paddy soil have increased, especially in the surface layer, indicative of continuous rice cultivation. However, due to rapid urbanization and industrialization, the cultivation of paddies in eastern China has gradually been discontinued leading to the loss of SOC stocks of approximately 10 % in a 6-year interval (from 2003 to 2009). A significant relationship between SOC and rice phytolith contents was found in the paddy soil horizons of P-01 (r?=?0.71, p?<?0.01) and P-03 (r?=?0.72, p?<?0.01), suggesting that phytolith-occluded organic carbon could be used as a biomarker to ascertain the development of SOC in the evolution of rice paddies over the past 6000 years.

Conclusions

Submerged rice cultivation led to a noticeable accumulation of SOC in paddies. Phytolith-occluded organic carbon could be used as a biomarker to monitor changes of OC contents in paddy soils.

     

Evaluation of biological and chemical nitrogen indices for predicting nitrogen-supplying capacity of paddy soils in the Taihu Lake region,China

Simple and rapid chemical indices of soil nitrogen (N)-supplying capacity are necessary for fertilizer recommendations. In this study, pot experiment involving rice, anaerobic incubation, and chemical analysis were conducted for paddy soils collected from nine locations in the Taihu Lake region of China. The paddy soils showed large variability in N-supplying capacity as indicated by the total N uptake (TNU) by rice plants in a pot experiment, which ranged from 639.7 to 1,046.2 mg N pot⁻¹ at maturity stage, representing 5.8% of the total soil N on average. Anaerobic incubation for 3, 14, 28, and 112 days all resulted in a significant (P < 0.01) correlation between cumulative mineral NH₄⁺-N and TNU, but generally better correlations were obtained with increasing incubation time. Soil organic C, total soil N, microbial C, and ultraviolet absorbance of NaHCO₃ extract at 205 and 260 nm revealed no clear relationship with TNU or cumulative mineral NH₄⁺-N. Soil C/N ratio, acid KMnO₄-NH₄⁺-N, alkaline KMnO₄-NH₄⁺-N, phosphate–borate buffer extractable NH₄⁺-N (PB-NH₄⁺-N), phosphate–borate buffer hydrolyzable NH₄⁺-N (PB_HYDR-NH₄⁺-N) and hot KCl extractable NH₄⁺-N (H_KCl−NH₄⁺-N) were all significantly (P < 0.05) related to TNU and cumulative mineral NH₄⁺-N of long-term incubation (>28 days). However, the best chemical index of soil N-supplying capacity was the soil C/N ratio, which showed the highest correlation with TNU at maturity stage (R = −0.929, P < 0.001) and cumulative mineral NH₄⁺-N (R = −0.971, P < 0.001). Acid KMnO₄-NH₄⁺-N plus native soil NH₄⁺-N produced similar, but slightly worse predictions of soil N-supplying capacity than the soil C/N ratio.     

Controlling effects of surface crusts on water infiltration in an arid desert area of Northwest China

Purpose

Surface crusts are important features in arid desert areas and are critical to hydrological processes and ecosystem development. This paper aims to understand the effects of crusts on water movement in the soil and the factors that affect this and to provide the soil parameters for estimation of saturated hydraulic conductivity (K _s) in ecohydrological models.

Materials and methods

The study area was located in the middle and lower reaches of the Heihe River Basin, an arid desert area in Northwest China. There were three crust types in this region: physical soil crusts (PSCs, formed by water drop and erosion), biological soil crusts (BSCs, formed by microorganisms, moss, algae, lichen, and soil materials), and salt soil crusts (SSCs, formed by soluble salts). The infiltration rates of different soil and crust types and scalped soils were determined in situ in the field conditions using a disc infiltrometer with three repetitions. Crusts and soils were collected, and their properties were determined in the laboratory.

Results and discussion

The K _s of crust were significantly lower than that of scalped soils with a decrease of 13–70 %. The K _s of crusts were related to the type of crust and the properties of soil beneath the crusts. In this region, the soil textures are similar throughout, due to ubiquitous loess sedimentation, so textural differences had no significant effect on K _s. Soil organic matter (SOM) played a weak negative role on K _s because most crusts had higher SOM than the underlying soil. However, both crust thickness and electrical conductivity (EC, an index of salt concentration) showed significantly negative exponential relationship with K _s. Therefore, the SSC with high EC and thick crust have the lowest K _s among all crust types. Because soil development is related to salt accumulation, structure, and crust formation, the K _s follows the order of Solonchaks < Cambisols < Regosols, from lowest to highest.

Conclusions

Crusts have different characteristics compared with original soils and are the limiting layer of water infiltration in these arid soils. Therefore, the characteristics of crust must be considered in ecohydrological models. The main apparent controlling parameters of water infiltration rate in this area are crust thickness and EC.

     

Assessing the potential of using biochar in mine rehabilitation under elevated atmospheric CO<Subscript>2</Subscript> concentration

Purpose

Re-establishment of soil nitrogen (N) capital is a priority in mine rehabilitation. We aimed to evaluate the effects of biochar addition on improving mine spoil N pools and the influence of elevated CO₂ concentration on mine rehabilitation.

Materials and methods

We assessed the effects of pinewood biochar, produced at three temperatures (650, 750 and 850 °C, referred as B₆₅₀, B₇₅₀ and B₈₅₀, respectively), on mine spoil total N concentrations with five different plant species, including a tree species (Eucalyptus crebra), N-fixing shrubs (Acacia floribunda and Allocasuarina littoralis) and C₃ and C₄ grasses (Austrodanthonia tenuior and Themeda australis) incubated at ambient (400 μL L^?1) and elevated (700 μL L^?1) atmospheric CO₂ concentrations, as well as the effects of elevated CO₂ on mine rehabilitation.

Results and discussion

Soil total N significantly improved following biochar incorporation under all plant species (P < 0.05) except for T. Australis. E. crebra had the highest soil total N (0.197%, 0.198% and 0.212% for B₆₅₀, B₇₅₀ and B₈₅₀, respectively). Different from the negligible influence of elevated CO₂ on soil properties under the grasses and the N-fixing shrubs, elevated CO₂ significantly increased soil water and hot water extractable organic C (WEOC and HWEOC, respectively) and decreased total C under E. crebra, indicating that the nutrient demands were not met.

Conclusions

Biochar addition showed the potential in mine rehabilitation in terms of improving soil N pool, especially with E. crebra. However, it would be more difficulty to rehabilitate mine spoils in future with the rising atmospheric CO₂ concentration.

     

Response of CaCl<Subscript>2</Subscript>-extractable heavy metals,polychlorinated biphenyls,and microbial communities to biochar amendment in naturally contaminated soils

Purpose

Biochar can be used to reduce the bioavailability and leachability of heavy metals, as well as organic pollutants in soils through adsorption and other physicochemical reactions. The objective of the study was to determine the response of microbial communities to biochar amendment and its influence on heavy metal mobility and PCBs (PCB52, 44, 101, 149, 118, 153, 138, 180, 170, and 194) concentration in application of biochar as soil amendment.

Materials and methods

A pot (macrocosm) incubation experiment was carried out with different biochar amendment (0, 3, and 6 % w/w) for 112 days. The CaCl₂-extractable concentration of metals, microbial activities, and bacterial community were evaluated during the incubation period.

Results and discussion

The concentrations of 0.01 M CaCl₂-extractable metals decreased (p?>?0.05) by 12.7 and 20.5 % for Cu, 5.0 and 15.6 % for Zn, 0.2 and 0.5 % for Pb, and 1.1 and 8.9 % for Cd, in the presence of 3 and 6 % of biochar, respectively, following 1 day of incubation. Meanwhile, the total PCB concentrations decreased from 1.23 mg kg^?1 at 1 day to 0.24 mg kg^?1 at 112 days after 6 % biochar addition, representing a more than 60 % decrease relative to untreated soil. It was also found out that biochar addition increased the biological activities of catalase, phosphatase, and urease activity as compared with the controls at the same time point. Importantly, the Shannon diversity index of bacteria in control soils was 3.41, whereas it was 3.69 and 3.88 in soils treated with 3 and 6 % biochar soil. In particular, an increase in the number of populations with the putative ability to absorb PCB was noted in the biochar-amended soils.

Conclusions

The application of biochar to contaminated soils decreased the concentrations of heavy metals and PCBs. Application of biochar stimulated Proteobacteria and Bacteroides, which may function to absorb soil PCB and alleviate their toxicity.

     

Response of <Emphasis Type="Italic">Piptatherum miliaceum</Emphasis> to co-culture with a legume species for the phytostabilisation of trace elements contaminated soils

Purpose

The presence of high concentrations of trace elements (TEs) in mine soils like those in the Sierra Minera of La Unión-Cartagena (SE Spain) limits the development of a vegetation cover on such sites, and pollution dispersion by water and wind erosion represents a serious risk for the surrounding ecosystems. The aim of this study was to evaluate different phytostabilisation procedures based on the co-culture of a legume (Bituminaria bituminosa) and a high-biomass (Piptatherum miliaceum) species for this type of soils.

Materials and methods

A pot experiment was carried out where B. bituminosa was tested as a soil pre-treatment strategy. Five different procedures were followed to study the growth stimulation or competition of both species in a contaminated soil from the Sierra Minera: (i) sowing of P. miliaceum without B. bituminosa (control treatment), (ii) sowing of P. miliaceum for co-cultivation of both species, (iii) sowing of P. miliaceum and co-cultivation of both species in soil with compost, (iv) harvesting and elimination of the aerial part of the plants before sowing of P. miliaceum and (v) harvesting and incorporation to the soil of the aerial part of B. bituminosa before sowing of P. miliaceum.

Results and discussion

The results showed that the co-culture of both species favoured the growth of P. miliaceum, whilst incorporating the aerial part of the legume to the soil increased nitrogen concentration in P. miliaceum but reduced its growth. The use of compost improved both the growth and N uptake of P. miliaceum and did not inhibit nodulation in B. bituminosa. TE extractability in the soils and accumulation in the plants were rather low and very little affected by the addition of the amendments or by co-culture of species.

Conclusions

Nitrogen availability plays an important role in P. miliaceum growth in TE-contaminated mine soils. The addition of compost together with legume cultivation is proposed as an effective combination for the cultivation of P. miliaceum in these soils, as both plant growth and soil conditions were improved following this procedure.