The effect of biochar loading rates on soil fertility,soil biomass,potential nitrification,and soil community metabolic profiles in three different soils

Purpose

Biochar is increasingly being used as a soil amendment to both increase soil carbon storage and improve soil chemical and biological properties. To better understand the shorter-term (10 months) impacts of biochar on selected soil parameters and biological process in three different textured soils, a wide range of loading rates was applied.

Materials and methods

Biochar derived from eucalypt green waste was mixed at 0, 2.5, 5, 10 % (wt/wt) with a reactive black clay loam (BCL), a non-reactive red loam (RL) and a brown sandy loam (BSL) and placed in pots exposed to the natural elements. After 10 months of incubation, analysis was performed to determine the impacts of the biochar rates on the different soil types. Also, microbial biomass was estimated by the total viable counts (TVC) and DNA extraction. Moreover, potential nitrification rate and community metabolic profiles were assayed to evaluate microbial function and biological process in biochar-amended soils.

Results and discussion

The results showed that biochar additions had a significant impact on NH₄ and NO₃, total C and N, pH, EC, and soil moisture content in both a soil type and loading-dependent manner. In the heavier and reactive BCL, no significant impact was observed on the available P and K levels, or the total exchangeable base cations (TEB) and CEC. However, in the other lighter soils, biochar addition had a significant effect on the exchangeable Al, Ca, Mg, and Na levels and CEC. There was a relatively limited effect on microbial biomass in amended soils; however, biochar additions and its interactions with different soils reduced the potential nitrification at the higher biochar rate in the two lighter soils. Community metabolic profile results showed that the effect of biochar on carbon substrate utilization was both soil type and loading dependent. The BCL and BSL showed reduced rates of substrate utilization as biochar loading levels increased while the opposite occurred for the RL.

Conclusions

This research shows that biochar can improve soil carbon levels and raise pH but varies with soil type. High biochar loading rates may also influence nitrification and the function and activity of microbial community in lighter soils.

     

Effect of nanoparticles on crops and soil microbial communities

Purpose

Nanoparticles (NPs) have received increased attention in recent past due to their unique distinct properties. Metal-based NPs are widely used in chemical and allied sector. Most of the research is directed to study the efficiency of NPs in medicine and agriculture. The aim of this review is to explore the possible threats posed by toxicity of various NPs on plants and microbial diversity.

Materials and methods

First, major sources of NPs to the environment were analyzed. The effects of metal-based NPs on the microbiota and plants are presented in this review. The results obtained by the authors during last 12 years of research are used.

Results and discussion

The exposure of soil to nanoparticles causes a decrease in soil microbial biomass and enzymatic activity, which impacts microbial community composition including yeasts, bacteria, fungi, and biological diversity. The effects of NPs on plants result in various types of abnormalities. Nanoparticles can also pose risks to human health.

Conclusions

Increased applications of NPs pose a threat to beneficial microbial communities as well as crops and soils. Thus, it is important to explore whether NPs could compromise crop yield, soil properties, soil organisms, and functional activities of soil.

     

Severe drought-induced community tolerance to heat wave. An experimental study on soil microbial processes

Purpose

The purposes of this study were to identify the influence of a severe drought period on the impact of a subsequent heat–drought disturbance on the microbial community of a Mediterranean agricultural soil and particularly to highlight the long-term effects on the microbial catabolic profiles.

Materials and methods

We performed an experiment in microcosms and applied the MicroResp? method on soil microbial communities.

Results and discussion

A 21-day combined heat–drought disturbance had less impact on soil microbial communities pre-exposed to a 73-day severe drought than on those that were not pre-exposed. These differences were observed not only for biomass and physiological traits (basal respiration, qCO₂), but also for catabolic microbial structure evolution during the recovery time.

Conclusions

These observations suggest that the physiological stress imposed by the initial severe drought changed the microbial catabolic structure or physiological state and favoured a portion of the microbial community best adapted to cope with the final heat–drought disturbance. Consequently, the initial severe drought may have induced a community tolerance to the subsequent heat wave. In this study, we also note that resilience was, more than resistance, an indicator of pre-exposure to stress. In the context of assessing the effects of extreme climatic events on soil microbial processes, these results suggest that future studies should take into account the historic stress of habitats and resilience parameters.

     

Arsenic modulates the composition of anode-respiring bacterial community during dry-wet cycles in paddy soils

Purpose

Bacteria able to extracelluar respiration, which could be enriched in the anode of microbial fuel cells (MFCs), play important roles in dissimilatory iron reduction and arsenic (As) desorption in paddy soils. However, the response of the bacteria to As pollution is unknown.

Materials and methods

Using soil MFCs to investigate the effects of As on anode respiring bacteria (ARB) communities in paddy soils exposed to As stress. The soil MFC performances were evaluated by electrochemical methods. The bacterial community compositions on anodes were studied using Illumina sequencing.

Results and discussion

In wet 1 phase, polarization curves of MFCs showed cathode potentials were enhanced at low As exposure but inhibited at high As exposure. In the meantime, anode potentials increased with As levels. The dry-wet alternation reduced As levels in porewater and their impacts on electrodes microorganisms. Arsenic addition significantly influenced the anode microbial communities. After dry-wet cycles, Deltaproteobacteria dominated in the anode with high As.

Conclusions

The dynamic changes of the communities on cathodes and anodes of soil MFCs in paddy soils with different As addition might be explained by their different mechanisms for As detoxification. These results provide new insights into the microbial evolution in As-contaminated paddy soils.

     

The effect of landslide on soil organic carbon stock and biochemical properties of soil

Purpose

The aim of the study was to present variability of content and quality of soil organic matter on the landslide surface. Attempts were made to demonstrate the progress of the process of soil cover restoration 7 years after the landslides and biochemical activity of soil associated with the restoration of soil cover.

Materials and methods

The landslide area was located in southern Poland, in the Sucha Forest District. The soil properties were studied on a regular grid of points, which covered the entire area of the landslide. In soil samples, particle size, soil aggregates content, pH, total carbon and nitrogen content, microbial biomass carbon and nitrogen and the activity of dehydrogenases were determined. Additionally, the fractions of soil organic matter were used in the study as an indicator of soil quality due to the many important interactions of these components in the soil system.

Results and discussion

This study identified the landslide area as characterised by a stronger diversification of physical, chemical, and biological properties. The upper part of the landslide (in the area referred to as the landslide niche) is strongly eroded and characterised by the least advanced soil cover recovery. Additionally, low soil organic matter content was observed in the upper part of the landslide, which restricted biological activity of the studied soils. Soil microbial biomass carbon increased with restoration of landslide soils.

Conclusions

The soil organic matter plays a key role for the initial stage of soil formation on a landslide. The amount of soil organic matter on the studied landslide had a positive effect on the microbial biomasses C and N, dehydrogenases activity. Estimating the soil organic matter fraction can be utilised as an indicator of changes in soil.

     

Functional and structural responses of bacterial and fungal communities from paddy fields following long-term rice cultivation

Purpose

Rice paddy soils undergo pedogenesis driven by periodic flooding and drainage cycles that lead to accumulation of organic matter and the stratification of nutrients and oxygen in the soil profile. Here, we examined the effects of continuous rice cultivation on microbial community structures, enzyme activities, and chemical properties for paddy soils along a chronosequence representing 0–700 years of rice cropping in China.

Materials and methods

Changes in the abundance and composition of bacterial and fungal communities were characterized at three depths (0–5, 5–10, and 10–20 cm) in relation to organic carbon, total nitrogen, dissolved organic carbon, microbial biomass carbon/nitrogen, and activities of acid phosphatase, invertase, and urease.

Results and discussion

Both soil organic carbon and total nitrogen increased over time at all three depths, while pH generally decreased. Microbial abundance (bacteria and fungi) and invertase and urease activity significantly increased with the duration of rice cultivation, especially in the surface layer. Fungal abundance and acid phosphatase activity declined with depth, whereas bacterial abundance was highest at the 5–10-cm soil depth. Profiles of the microbial community based on PCR-DGGE of 16S rRNA indicated that the composition of fungal communities was strongly influenced by soil depth, whereas soil bacterial community structures were similar throughout the profile.

Conclusions

Soil bioactivity (microbial abundance and soil enzymes) gradually increased with organic carbon and total nitrogen accumulation under prolonged rice cultivation. Microbial activity decreased with depth, and soil microbial communities were stratified with soil depth. The fungal community was more sensitive than the bacterial community to cultivation age and soil depth. However, the mechanism of fungal community succession with rice cultivation needs further research.

     

Development of microbial community structure in vegetable-growing soils from open-field to plastic-greenhouse cultivation based on the PLFA analysis

Purpose

The objectives of this study were to investigate (i) how the changes in cultivation pattern of vegetable affect soil microbial communities and (ii) the relationships between soil physico-chemical properties and microbial community structure.

Materials and methods

Soil samples were collected from fields growing vegetable crops with various times of plastic-greenhouse cultivation (0, 1, 4, 7 and 15 years, respectively). Phospholipid fatty acid (PLFA) analysis was conducted to reveal the soil microbial community of the test soils.

Results and discussion

The open-field soil had the highest total PLFAs amount. Although the Shannon-Weaver index was also highest in the open-field soil, the difference was not significant. Plastic-greenhouse cultivation decreased PLFAs species diversity and richness. Cluster analysis and principal component analysis (PCA) of the PLFA profiles revealed distinct groupings at different times during plastic-greenhouse cultivation.

Conclusions

Ultimately, PLFA analyses showed that long-term plastic-greenhouse cultivation make the physiological status of soil microbial community worse and increased stress level of microorganisms. And soil microbial community was significantly affected by field water capacity and water-soluble organic carbon. The study highlights the potential risk of long-term plastic-greenhouse cultivation to soil microbial community.

     

Stoichiometric variation of carbon,nitrogen, and phosphorus in soils and its implication for nutrient limitation in alpine ecosystem of Eastern Tibetan Plateau

Purpose

The main objectives of this research are to decipher the stoichiometric characteristics of carbon (C), nitrogen (N), and phosphorus (P) in soils from the alpine ecosystem and to obtain information about nutrient limitation on plants and microbes.

Materials and methods

The soils were sampled along an altitudinal gradient (2000 to 4300 m above sea level) from the eastern slope of Gongga Mountain in eastern Tibetan Plateau. In total of 102 soil samples in profiles and 27 soil microbial biomass (SMB) samples from five vegetation zones were collected to analyze the concentrations of C, N, and P as well as their ratios. The concentrations of C and N were measured using an automated C/N analyzer, total P was detected by inductively coupled plasma-atomic emission spectrometer, and the concentrations of microbial biomass C, N, and P were measured by the chloroform fumigation-extraction method. Soil P fractions were extracted by modified Hedley sequential extraction method.

Results and discussion

The concentrations of C, N, and P in the soils and SMB varied spatially, whereas the variation of their ratios was constrained. The C:N:P ratios were 556:22:1 for the O horizon, 343:16:1 for the A horizon, 154:7:1 for the B horizon, and 63:3:1 for the C horizon, indicating a significant decrease with depth. The mean ratio in the SMB was 51:6.6:1. Microbial biomass C, N, and P were important components of soil nutrients, especially the microbial biomass P which accounted for 40.8 % of soil available P. The C:P and N:P were higher in the soils of broadleaf-coniferous and coniferous forests, whereas the ratios in the SMB were higher in the broadleaf forest. The ratios of C and N to available P in the soils decreased significantly with altitude.

Conclusions

The local climate, vegetation succession, and soil development in the high mountain resulted in the soil nutrient cycling different from that in other terrestrial ecosystems. Among the different vegetation zones, the P-limitation of plants and microbial communities might be possible in the soils of lower land forests in the long term.

     

Evaluation of palygorskite for remediation of Cd-polluted soil with different water conditions

Purpose

The study aimed at comparing the effects of different water managements on soil Cd immobilization using palygorskite, which was significant for the selection of reasonable water condition.

Materials and methods

Field experiment was taken to discuss the in situ remediation effects of palygorskite on Cd-polluted paddy soils, under different water managements, using a series of variables, including pH and extractable Cd in soils, plant Cd, enzyme activity, and microorganism number in soils.

Results and discussion

In control group, the pH in continuous flooding was the highest under three water conditions, and compared to conventional irrigation, continuous flooding reduced brown rice Cd by 37.9%, and brown rice Cd in wetting irrigation increased by 31.0%. In palygorskite treated soils, at concentrations of 5, 10, and 15 g kg^?1, brown rice Cd reduced by 16.7, 44.4, and 55.6%; 13.8, 34.5, and 44.8%; and 13.1, 36.8, and 47.3% under continuous flooding, conventional irrigation, and wetting irrigation (p < 0.05), respectively. The enzyme activity and microbial number increased after applying palygorskite to paddy soils.

Conclusions

Continuous flooding was a good candidate as water management for soil Cd stabilization using palygorskite. Rise in soil enzyme activity and microbial number proved that ecological function regained after palygorskite application.

     

Biochar effects on soil water infiltration and erosion under seal formation conditions: rainfall simulation experiment

Purpose

Soil amendment with biochar can result in decreased bulk density and soil penetration resistance, and increased water-holding capacity. We hypothesized that adding biochar could moderate the reductions in infiltration rates (IR) that occur during high-intensity rainstorms in seal-prone soils, and hence result in reduced runoff and erosion rates. The objectives were to (i) evaluate biochar potential to improve infiltration and control soil erosion, and (ii) investigate the mechanisms by which biochar influences infiltration rate and soil loss.

Materials and methods

Rainfall simulation experiments were conducted on two physicochemically contrasting, agriculturally significant, erosion-prone soils of Israel that are candidates for biochar amendment: (i) non-calcareous loamy sand, and (ii) calcareous loam. Biochar produced from mixed wood sievings from wood chip production at a highest treatment temperature of 620 °C was used as the amendment at concentrations from 0 to 2 wt%.

Results and discussion

In the non-calcareous loamy sand, 2 % biochar was found to significantly increase final IR (FIR) by 1.7 times, and significantly reduce soil loss by 3.6 times, compared with the 0 % biochar control. These effects persisted throughout a second rainfall simulation, and were attributed to an increase in soil solution Ca and decrease in Na, and a subsequently decreased sodium adsorption ratio (SAR). In the calcareous loam, biochar addition had no significant effect on FIR but did reduce soil loss by 1.3 times. There were no biochar-related chemical changes in the soil solution of the calcareous loam, which corresponds to the lack of biochar impact on FIR. Surface roughness of the calcareous loam increased as a result of accumulation of coarse biochar particles, which is consistent with decreased soil loss.

Conclusions

These results confirm that biochar addition may be a tool for soil conservation in arid and semi-arid zone soils.

     

Sustainability of in situ remediation of Cu- and Cd-contaminated soils with one-time application of amendments in Guixi,China

Purpose

In situ immobilization of heavy metal-contaminated soils with the repeated incorporation of amendments can effectively reduce the bioavailability of soil heavy metals. However, the long-term application of amendments would lead to the destruction of soil structure and accumulation of soil toxic elements, ultimately affecting food security and quality. Thus, the sustainability of the amendments in a heavy metal-contaminated soil was evaluated from 2010 to 2012.

Materials and methods

Batch field experiments were conducted in the soils, which were amended with apatite (22.3 t ha^?1), lime (4.45 t ha^?1), and charcoal (66.8 t ha^?1), respectively. The amendments were applied only one time in 2009, and ryegrass was sown each year. Ryegrass and setaria glauca (a kind of weed) were harvested each year. Concentrations of copper (Cu) and cadmium (Cd) were determined by batch experiments. Five fractions of Cu and Cd were evaluated by a sequential extraction procedure.

Results and discussion

Ryegrass grew well in the amended soils in the first year, but it failed to grow in all the soils in the third year. However, setaria glauca could grow with higher biomass in all the amended soils. The treatment of apatite combined with plants was more effective than lime and charcoal treatments in removing Cu and Cd from the contaminated soils by taking biomass into account. Apatite had the best sustainable effect on alleviating soil acidification. The Cu and Cd concentrations of CaCl₂-extractable and exchangeable fractions decreased with the application of amendments. Moreover, apatite and lime could effectively maintain the bioavailability of Cu and Cd low.

Conclusions

Apatite had a better sustainable effect on the remediation of heavy metal-contaminated soils than lime and charcoal. Although all the amendment treated soils did not reduce soil total concentrations of Cu and Cd, they could effectively reduce the environmental risk of the contaminated soils. The findings could be effectively used for in situ remediation of heavy metal-contaminated soils.

     

An efficient approach towards the bioremediation of copper,cobalt and nickel contaminated field samples

Purpose

The synthetic soil based bioremediation approach as reasonable and sustainable practice at the farming level where desired bioremediation could be established at lower cost.

Materials and methods

Metal-tolerant bacteria from different environmental field samples, (a) a municipal dump site, (b) an agricultural field and (c) sludge of electro-plating industries, were screened and characterized. Bioremediation of metal contaminants through isolated bacteria was compared under two different conditions, synthetic soil and basic minimal media containing copper, cobalt and nickel.

Results and discussion

The pollutants arising from industrial effluents are imparting a huge negative impact on agricultural land. Microbes are predominant in heavy metal-contaminated sites, which signifies as a potential opportunity for the researchers towards bioremediation. Three bacterial species showed high metal tolerance; 16S ribosomal DNA (rDNA) analysis revealed that the organisms were Proteus vulgaris strain, Stenotrophomonas sp. and Bacillus thuringiensis. Percentage removal of metals was also analysed under different concentrations and pH.

Conclusions

The current tested methods are helpful in streamlining the natural compliance of fragile elements and its uptake into the microbial system under in vitro and in situ conditions.

     

Dry cultivation enhances cadmium solubility in contaminated soils but minimizes cadmium accumulation in a leafy vegetable

Purpose

Water management has a strong influence on Cd solubility in agricultural soils, affecting Cd uptake in crops. In the process, sulfur interaction with other metals such as zinc may play an important role. A pot experiment was carried out to investigate the effects of water management coupled with zinc and sulfate amendment on Cd uptake by the leafy vegetable amaranth with a strong Cd accumulation tendency in its edible parts.

Materials and methods

The soils were amended with Cd, Cd+SO₄ and Cd+SO₄+Zn with no amendment as control. Then, the soils were flooded for 1 month, after which amaranth was grown with soil kept saturated (wet cultivation). In the succeeding planting, soils were tilled to aeration condition under which amaranth was grown again (dry cultivation). Soil and crop samples were collected and analysed for various parameters.

Results and discussion

The readily exchangeable quantities of Cd and Zn in the soil decreased under wet cultivation, increasing again under dry cultivation but to levels lower than those in the initial soil. Wet cultivation enhanced plant Cd concentration but reduced Zn accumulation compared to dry cultivation. Zn bioavailability was strongly affected by soil water status but failed to reduce Cd uptake by amaranth. Irreversible or slowly reversible changes occurred in Cd and Zn solubility and phytoavailability as soil water-saturated status was altered by periodic flooding events.

Conclusions

Dry cultivation with lower soil water content ensured high production with low Cd in the edible part of this leaf vegetable and so remains the recommended irrigation regime.

     

Chicken-manure-derived biochar reduced bioavailability of copper in a contaminated soil

Purpose

Copper (Cu) contamination has been increasing in land ecosystems due to economic development activities. Excessive amount of Cu in soils is toxic to both plants and microorganisms. Biochar (BC) is known to immobilize soil Cu. The objectives of this research were to investigate the effects of chicken-manure-derived BC (CMB) on Cu immobilization, and growth of native metallophyte Oenothera picensis in a Cu-contaminated soil.

Materials and methods

A Cu-contaminated sandy soil (338 mg Cu kg^?1) was spiked and equilibrated with additional Cu (0, 100, and 500 mg Cu kg^?1). The spiked soil was then amended with CMB (0, 5, and 10 % w/w) and incubated for 2 weeks. The metallophyte was grown on these treatments under greenhouse conditions for 3 months. Pore water solutions were collected from the plant pots every 30 days. After the harvest, soil and pore water pH, soil Cu fractions, pore water Cu concentration, soil microbial activity, plant biomass weight, and Cu concentration in plant parts were determined.

Results and discussion

The CMB increased the pH of soils and soil pore water, and probably also soil major nutrients. It reduced the exchangeable fraction of Cu but increased its organic matter and residual fractions. At the same time, it decreased the Cu concentration in the soil pore water. The CMB increased basal respiration and dehydrogenase activity. The CMB application produced up to three and seven times more root and shoot biomass, respectively. In addition, shoots accumulated lesser Cu than control but roots did more. Plants survived in soil that was spiked with 500 mg Cu kg^?1, only when CMB dose was 10 %.

Conclusions

The CMB affected the Cu uptake in plant by altering the mobility, bioavailability, and spatial distribution of Cu in soils. The increase in available nutrients and decrease in Cu toxicity facilitated plant growth. The increased microbial activity probably also promoted the plant growth and reduced the Cu bioavailability. Therefore, CMB can be used to remediate Cu-contaminated soils.

     

Phytotoxicity of natural soils using physiological and biochemical endpoints reveals confounding factors: can a weight of evidence tackle uncertainty?

Purpose

Standard assays for phytotoxicity provide a reductionist view on the performance of plants under toxic stress. To address two of the most prominent issues in plant toxicity studies, our aims were (1) to assess how well physiological and biochemical parameters complement standard toxicological endpoints when testing natural soils and (2) to assess the suitability of three commonly used control soils as comparative references.

Material and methods

We compared the performance of Zea mays and Helianthus annuus in three control soils (artificial Organisation for Economic Co-operation and Development (OECD) soil, standard LUFA 2.2 soil, and turf-perlite) against three natural soils representing a gradient of contamination (from a deactivated uranium mine). Standard endpoints (emergence and biomass) were estimated, along with pigment content, photosynthetic parameters, cellular injury, and proline content.

Results and discussion

The toxicological profile of natural soils was highly dependent on the control soil used as reference; also, plant physiological performance was influenced by the soils’ properties. We discuss the need to interpret and combine multiple lines of evidence as a way to increase the degree of confidence one classifies soils based on their ecotoxicity, and this is where the integration of physiological and biochemical parameters bring added value.

Conclusions

When facing large variability in soil characteristics, it is best to collect and integrate as much information possible to strengthen conclusions about phytotoxicity of natural soils. Obviously, this refutes reductionist views and places the final conclusion in the hands of expert judgment.

     

Regulation of macro,micro, and toxic element uptake by <Emphasis Type="Italic">Salix</Emphasis> × <Emphasis Type="Italic">smithiana</Emphasis> using liming of heavily contaminated soils

Purpose

Willow cultivation in soils heavily contaminated by risk elements is a challenging issue due to phytotoxic effects that restrict plant growth. Liming reduces the mobility of some risk elements in contaminated soils and therefore can be a suitable measure for contaminated soils but can also affect availability of nutrients for planted willows. We investigate how liming affects concentrations of macro, micro, and toxic elements in the organs of willows planted in contaminated soils.

Materials and methods

We established a 3-year pot experiment with Salix × smithiana planted in weakly acid and alkaline soils anthropogenically seriously contaminated by As, Cd, Pb, and Zn. Soils were both untreated and treated with two doses of lime and dolomite in the first year before planting. We determined biomass production, mortality, and the concentration of macro- and micronutrients and toxic elements in the willows’ aboveground organs.

Results and discussion

Lime application increased biomass production in both soils; dose of lime played an important role for its increase only in alkaline soil. Lime in a higher dose was incompatible with the vitality of just-planted willows in both soils. Doses of dolomite significantly affected the biomass production and mortality of willows, where lower doses caused a permanent decrease of biomass production and mortality in weakly acid soil. The toxicity of Cd and Zn in leaves was recorded in both untreated soils; the latent deficiency of P and deficiency of Fe in leaves was only recorded in weakly acid untreated soil.

Conclusions

Lime application irrespective of dose with foliar Fe application seemed to be the most suitable measure for increasing biomass production and decreasing toxic elements, especially Cd and Zn, without decreasing the macro- and micronutrients in the aboveground organs of willows in weakly acid soil. In alkaline soil, only higher doses of lime had a positive effect on the studied parameters. Dolomite application is not a suitable measure for planting willows in both contaminated soils. Dolomite in a lower dose impairs the growth of willows in weakly acid soil.

     

The influence of soil properties and geographical distance on the bacterial community compositions of paddy soils enriched on SMFC anodes

Purpose

Exoelectrogens are important microorganisms playing crucial roles in the biogeochemistry of elements in paddy soils. But it remains unclear how the soil properties and geographical distances affect the exoelectrogen communities of Chinese paddy soils. So the objectives of this study were to investigate the diversity and composition of these microbial communities which were enriched on the anodes of soil microbial fuel cells (SMFCs) and to elucidate the links between the microbial community compositions and their driving factors.

Materials and methods

We used Illumina HiSeq sequencing to determine the bacterial community structures which were enriched on the anodes of SMFCs. Variance partitioning analysis (VPA) was used to obtain the contribution of soil properties and geographical distance to the variations of bacterial communities.

Results and discussion

Active bacterial community on anodes of the closed circuit SMFCs differs significantly from the control open circuit SMFCs. Anodes of all the closed circuit SMFCs were characterized by the presence of high numbers of Nitrospira and Anaerolineae. Taxonomic similarities and phylogenetic similarities of bacterial communities from different paddy soil samples across North and South China were found to be significantly correlated with geographical distances. The relationship between the similarities and the geographic distance exhibited a distance-decay relationship. VPA showed that both geographical distances and soil properties affect the structure of bacterial communities detected on anodes.

Conclusions

Our study gives a foundation for understanding the distribution and diversity of exoelectrogens in paddy soils and elucidates the links between the distribution and the diversity of extracellular respiring bacteria and their driving factors. Furthermore, this study also identifies the crucial factors which should be used to evaluate the response of exoelectrogens to environmental perturbations in Chinese paddy soils.

     

Assessing the influence of technosol and biochar amendments combined with <Emphasis Type="Italic">Brassica juncea</Emphasis> L. on the fractionation of Cu,Ni, Pb and Zn in a polluted mine soil

Purpose

Soil metal pollution is a widespread problem around the world and remediation of these soils is difficult. The objective of this study was to investigate the effect of two different strategies on the chemical fractions of metals in a soil of a depleted copper mine: (1) amending with a mixture of a technosol made of wastes and biochar and (2) amending combined with planting vegetation (Brassica juncea).

Materials and methods

A 3-month greenhouse experiment was carried out to evaluate the effects of organic amendments and vegetation on the metal fractionation of Cu, Ni, Pb and Zn in a mine soil of the depleted copper mine at Touro (Spain). We compared the influence of organic amendments alone (technosol?+?biochar) and combined with mustard plants (Brassica juncea L.).

Results and discussion

The results showed that amending with a technosol made of wastes promoted plant growth (from 0.7 to 2.9 g of biomass produced) and reduced the CaCl₂-extractable metal concentration in soil, reduced the mobility factor of Cu from 18.3 to 1.6, Ni from 47.5 to 2.3 and Pb from 17.9 to 2.1, and also reduced the concentration of metals in the mobile soil fractions. It was not possible to grow up Brassica juncea plants in the untreated settling pond soil due to the extremely degraded conditions of that soil. However, the application of the used technosol increased the Pb and Zn pseudototal concentrations in the amended soils.

Conclusions

We conclude that the combination of amending with wastes and planting B. juncea provides little additional benefit for remediating a metal-polluted soil compared with incorporation of wastes alone.

     

Impacts of continuous excessive fertilization on soil potential nitrification activity and nitrifying microbial community dynamics in greenhouse system

Purpose

Sampling and analysis of greenhouse soils were conducted in Shouguang, China, to study continuous excessive fertilization effect on nitrifying microbial community dynamics in greenhouse environment.

Materials and methods

Potential nitrification activity (PNA), abundance, and structure of nitrifying microbial communities as well as the correlations with soil properties were investigated.

Results and discussion

Short-term excessive fertilization increased soil nutrient contents and the diversity of nitrifying microbial communities under greenhouse cultivation. However, the abundance and diversity of nitrifying communities decreased greatly due to the increase of soil acidity and salinity after 14 years of high fertilization in greenhouse. There was a significant positive correlation between soil PNA and the abundance of ammonia-oxidizing bacteria (AOB) but not that of ammonia-oxidizing archaea (AOA) in topsoil (0–20 cm) when pH ≥7. Soil PNA and AOB were strongly influenced by soil pH. The groups of Nitrososphaeraceae, Nitrosomonadaceae, and Nitrospiraceae were predominant in the AOA, AOB, and nitrite-oxidizing bacteria (NOB) communities, respectively. Nitrifying community structure was significantly correlated with soil electrical salinity (EC), organic carbon (OC), and nitrate nitrogen (NO₃ ^?–N) content by redundancy analysis (RDA).

Conclusions

Nitrification was predominated by AOB in greenhouse topsoil with high fertilizer loads. Soil salinity, OC, NO₃ ^?–N content, and pH affected by continuous excessive fertilization were the major edaphic factors in shaping nitrifying community structure in greenhouse soils.

     

Influence of organic and inorganic passivators on Cd and Pb stabilization and microbial biomass in a contaminated paddy soil

Purpose

Soil contamination with heavy metals, such as Cd and Pb, has caused severe health and environmental risks all over the world. Possible eco-friendly solutions for Cd and Pb immobilization were required to reduce its mobility through various cost-effective amendments.

Materials and methods

A laboratory incubation study was conducted to assess the efficiency of biochar (BC), zeolite (ZE), and rock phosphate (RP) as passivators for the stabilization of Cd and Pb in paddy soil as well as soil microbial biomass. Various extraction techniques were carried out: a sequential extraction procedure, the European Community Bureau of Reference (BCR), toxicity characteristic leaching procedure (TCLP) test, and single extraction with CaCl₂. The impact of passivators on soil pH, dissolved organic carbon (DOC), and microbial biomass (carbon, nitrogen, and phosphorus) was examined in the metal contaminated soil.

Results and discussion

The results showed that the exchangeable portion of Cd in soil was significantly reduced by 34.8, 21.6, and 18.8% with ZE, RP, and BC at a 3% application rate, respectively. A similar tendency of reduction in Pb soluble portion was observed by ZE (9.6%), RP (20%), and BC (21.4%) at a 3% application rate. Moreover, the TCLP leachate of Cd and Pb was apparently reduced by 17 and 30.3% with BC at a 3% application dose, respectively, when compared to the control. Soil pH, nutrients, and microbial biomass C, N, and P were significantly increased with the addition of BC, RP, and ZE passivators.

Conclusions

The results showed that the incorporation of BC, ZE, and RP significantly reduced the Cd and Pb mobility in paddy soil as well as enhanced soil nutrients and microbial biomass. Overall, among all the amendments, rice straw derived-BC performed better for Cd and Pb immobilization in paddy soil.