Inflexibility of vertebral number in chum salmon <Emphasis Type="Italic">Oncorhynchus keta</Emphasis>

Chum salmon Oncorhynchus keta eggs from the Chitose and Shiriuchi rivers in Hokkaido, northern Japan, were incubated under identical conditions with the aim of comparing vertebral number (V _N) to that reported archived data from the 1950s. The comparison revealed that mean V _N of salmon from the Shiriuchi River has remained unchanged for 50 years and is higher than that from the Chitose River. The V _N in the Chitose River salmon was found to be significantly higher than that recorded in the archival data. The variation in the mean V _N of chum salmon fry collected during different seasons and years in the Chitose River falls within a range that has remained constant, suggesting that the difference between the values obtained in our study and the archival data may be due to differences in the timing of egg collection. These results indicate that the mean V _N of chum salmon has been stable for a long period. Incubation experiments under identical conditions are a useful tool for examining changes in genetic structure and detecting the essential properties of populations.     

Estimation of heritability of vertebral number in chum salmon <Emphasis Type="Italic">Oncorhynchus keta</Emphasis>

Hereditary causes of variation in the vertebral number of chum salmon were analyzed to estimate heritability for populations in the Chitose and Shikiu Rivers, Hokkaido Island, northern Japan. A total of 70 families were produced by diallel cross mating and then heritability was estimated using two statistical tests: a two-way ANOVA and a parent-offspring regression. Heritability estimates ranged from 0.26 to 1.91 and showed a strong correlation between the values from the two different tests. Estimates from female components were substantially higher than those from male components, which can be attributed to the maternal effect. Heritability in the Shikiu River population was shown to be higher than that in the Chitose River population. These results indicate that the heritability of vertebral number in chum salmon is generally high, and also that vertebral number is controlled by hereditary causes.     

Quantitative analysis of <Emphasis Type="Italic">Ichthyobodo salmonis</Emphasis> an ectoparasitic flagellate infecting juvenile chum salmon <Emphasis Type="Italic">Oncorhynchus keta</Emphasis> in hatcheries

Ichthyobodosis caused by the ectoparasitic flagellate Ichthyobodo salmonis is a significant cause of mortality in juvenile chum salmon Oncorhynchus keta reared in hatcheries of northern Japan. The present study established a real-time quantitative polymerase chain reaction assay (qPCR) of I. salmonis ribosomal DNA (rDNA) using SYBR Green. This assay allows monitoring of parasite infections for the epidemiological study and control of ichthyobodosis in hatcheries. qPCR showed high reproducibility for measurements between 1.0 and 1.0 × 10⁸ rDNA copy/μl. There was a significant positive correlation between the number of parasites and the amount of I. salmonis rDNA. A survey using the qPCR assay indicated that infection by I. salmonis was present in 23 of 87 hatcheries; parasite loads were estimated to be between 50 and 750 parasites/g juvenile body weight. These results demonstrate that our qPCR assay enables the surveying of juvenile chum salmon reared in hatcheries for infection by I. salmonis.     

Seasonal variations in and effect of incubation water temperature on vertebral number in naturally spawning chum salmon <Emphasis Type="Italic">Oncorhynchus keta</Emphasis>

Seasonal variations and reaction norms for vertebral number (V _N) in response to incubation water temperature were estimated in adult and juvenile naturally spawning chum salmon Oncorhynchus keta. The mean V _N of adults varied according to spawning time; the early-spawning population had higher V _N values than the late-spawning population. Moreover, the mean V _N values in the early-spawning population decreased with seasonal changes, whereas V _N values in the late-spawning population remained stable. Chum salmon embryos in three full-sib families were incubated at five different temperatures until hatching, and the V _N values of the resulting juveniles were analyzed. The V _N reaction norm to incubation water temperature showed a V-shaped curve that was lowest at an intermediate temperature. The mean V _N at the same incubation temperature varied among the three families. These results suggest that V _N values in chum salmon are influenced by genetic components and incubation water temperatures. V _N may be a useful parameter for estimating the environmental conditions during ontogenesis and the genetic background by detecting population changes.     

Effect of riverbed conditions on survival of planted eyed eggs in chum salmon <Emphasis Type="Italic">Oncorhynchus keta</Emphasis>

Wild stocks of chum salmon Oncorhynchus keta are supplemented by hatchery fry enhancement programs in northern Honshu, Japan. To maintain these programs, there is a need to reduce expenses and labor. Eyed egg planting is more cost effective than hatchery production of fry. Therefore, we evaluated the effect of environmental conditions on survival of chum salmon eyed eggs planted using Whitlock–Vibert boxes. We measured the percent cumulative weight of fine sediments, Fredle index (FI) as a measure of permeability, vertical hydraulic gradient, water depth (WD), and flow velocity at planting locations. Egg-to-fry survival averaged 92.7% (range: 57.2–100%) in 2013 (N = 19) and 71.5% (range: 6.4–100%) in 2014 (N = 23). Survival was significantly positively correlated with FI and flow velocity, negatively associated with percent cumulative weight of fine sediments and WD. Vertical hydraulic gradient had no effect on survival. Our results suggest that a higher FI (i.e., low amount of fine material and larger particle size), higher flow velocity, and shallower WD reduce the mortality of planted chum salmon eyed eggs. This is likely a result of increased permeability in the substrate and restriction of fine sediment intrusion into the incubation zone.     

Estimating the origins of adult chum salmon <Emphasis Type="Italic">Oncorhynchus keta</Emphasis> in the Okhotsk and Sea of Japan regions using discriminant analysis of scale characteristics

Linear discriminant analysis (LDA) based on scale patterns was used to develop a methodology of estimating regional origins of chum salmon. Age-4 fish were sampled in 2004–2006 from 12 river stocks of the Okhotsk and Sea of Japan (SJ) regions from Hokkaido to Honshu. The scale radius at the first annulus of each fish was separated into i intervals and the radius of each interval was divided by the number of scale circuli within the interval to quantify scale patterns. The i variables and five other morphometric measurements were used in a stepwise LDA to classify the following regional groups: Hokkaido and Honshu (I), Okhotsk and SJ (II), Okhotsk, Hokkaido SJ and Honshu SJ (III). Percentages of correctly classified fish (hit rates) improved with increased i but tended to be close to asymptotic values in all cases. Hit rates for each river stock in case (I) ranged from 74.3% to 100% (mean 97.2%), estimated by direct maximum likelihood methods using predictor variable sets from the best models for LDAs. Hit rates were lower in cases (II) and (III). This study demonstrated that scale patterns are useful for classifying the origins of chum salmon, at least between Hokkaido and Honshu.     

Relationship between zooplankton abundance and the early marine life history of juvenile chum salmon <Emphasis Type="Italic">Oncorhynchus keta</Emphasis> in eastern Hokkaido,Japan

Interannual variations in abundance, timing of outmigration from rivers, growth rate and condition of juvenile chum salmon (Oncorhynchus keta) were studied in the Nemuro Strait (eastern Hokkaido, Japan) during 1999–2002 to establish a possible relationship to zooplankton abundance. The otolith microstructure of juveniles was examined each year in late June to determine their time and size at sea entry (i.e., outmigration), and to estimate the early marine growth rates. Salmon outmigration peaked in mid- or late May, which coincided, in three of the four study years, with the peak release of juveniles into rivers within the study area. Abundance, growth rate and condition of fish were higher in 2001, when—compared to other years—smaller fish experienced higher growth rates, coinciding with greater zooplankton abundance for that year. Our results suggest that high zooplankton abundance positively influenced juvenile chum salmon growth and the condition of the fish during their early marine life despite their small size at sea entry.     

Growth rate characteristics of juvenile chum salmon <Emphasis Type="Italic">Oncorhynchus keta</Emphasis> originating from the Pacific coast of Japan and reaching Konbumori,eastern Hokkaido

Juvenile chum salmon Oncorhynchus keta originating from rivers along the Pacific coast of Japan migrate northwards to the Sea of Okhotsk, typically passing off Konbumori, near the easternmost part of Hokkaido Island. We used daily-increment analysis of otoliths to back-calculate the growth rates [mean daily growth rate in fork length (FL)] of 369 juveniles (56–146 mm FL) originating from various rivers southwest of Konbumori, and sampled at Konbumori between 2005 and 2014. We examined differences in growth rate in terms of differences in distance from the source of juveniles, their river or region of origin, to Konbumori, and FL at time of collection. The results show that juvenile chum salmon originating from distant sources tended to grow faster than those from more proximal sources, likely contributing to larger FLs in the former. Growth rates of larger fish (≥ 90 mm FL) differed little (medians: 0.64–0.68 mm/day) among regions of origin, whereas those of smaller fish tended to be low among fish originating from more proximal regions (20–126 km from Konbumori). These results suggest that fish migrating from more distant rivers were better able to survive and to reach Konbumori by achieving or exceeding a certain growth rate.     

Differences in longitudinal distribution patterns along a Honshu stream of brown trout <Emphasis Type="Italic">Salmo trutta</Emphasis>, white-spotted charr <Emphasis Type="Italic">Salvelinus leucomaenis</Emphasis> and masu salmon <Emphasis Type="Italic">Oncorhynchus masou</Emphasis>

Brown trout Salmo trutta were first introduced into Japan in 1892, and they currently naturally reproduce in several rivers in Honshu and Hokkaido, Japan. Although negative impacts of brown trout introductions on native salmonid fishes have been documented in some Hokkaido rivers, studies of ecological interactions between brown trout and native salmonid fishes on Honshu are limited. In this study, we describe the longitudinal distribution patterns of introduced brown trout, white-spotted charr Salvelinus leucomaenis and masu salmon Oncorhynchus masou in a 4 km stretch of a stream in central Honshu. Underwater observations were conducted in all pools within upstream, middle and downstream sections (190–400 m in length) of this stretch in order to estimate the densities of these species. Only white-spotted charr was observed in the upstream section, while brown trout and masu salmon were observed in the middle and downstream sections. Masu salmon densities, however, were much lower than brown trout densities. In the downstream section, white-spotted charr was absent. These results are consistent with results from previous studies of Hokkaido rivers, where it was found that white-spotted charr in low-gradient areas tend to be displaced by brown trout.     

Immunostimulatory effect of salmon prolactin on expression of Toll-like receptors in <Emphasis Type="Italic">Oncorhynchus mykiss</Emphasis> infected with <Emphasis Type="Italic">Piscirickettsia salmonis</Emphasis>

In aquaculture, antibiotics are the traditional treatment used against bacterial infections. However, their use has increasingly come into question given their effects on fish and, possibly, on human health. Consequently, there is interest in developing alternative treatments aimed at stimulating the innate immune response of fish, which is the first line of defense against pathogens. In relation to this, the Toll-like receptors (TLR) aid in the selective identification of pathogens. The present study evaluated immunostimulatory activity of prolactin (PRL) hormone on expression levels of TLR1, 9, and 22, MyD88, and IL-1β during in vitro infection with the fish pathogen Piscirickettsia salmonis, in primary cultures of Oncorhynchus mykiss head kidney cells. Results indicated that PRL increased expression of TLRs and MyD88 during the first hours of bacterial infection, while a constant increase in expression was found for IL-1β. These findings suggest that PRL indirectly modulates expression of TLRs by activating expression of suppressors of cytokine signaling, thereby regulating immune response over long periods of time during bacterial infection.     

Comparison of morphological and DNA-based techniques for stomach content analyses in juvenile chum salmon <Emphasis Type="Italic">Oncorhynchus keta</Emphasis>: a case study on diet richness of juvenile fishes

To identify the stomach contents of marine organisms, morphological observations are commonly conducted. However, the results obtained by this traditional method are frequently biased, as it is difficult to detect partially digested, soft-bodied organisms. To resolve this, recent studies have used DNA-based (DNA barcoding) analyses to examine the diet breadth of marine organisms. Here, we compared the prey richness of juvenile fishes using morphological observations and DNA-based analyses, with a focus on juvenile chum salmon Oncorhynchus keta. A higher number of prey taxa were successfully identified using DNA-based analyses than morphological observations. However, we also noticed several shortcomings of the DNA-based analyses, as reported in other diet-analysis studies that used molecular techniques. For example, the degree of digestion among prey taxa might have resulted in differential sensitivity to DNA detection. Additionally, several prey taxa could not be precisely identified, as the sequence data for some of the targeted organismal groups are unavailable in public gene databases. Remarkably, it is also possible that DNA-based analyses detected secondary prey, and therefore, the richness of prey taxa was likely overestimated. Thus, dietary analyses of juvenile fishes need to be carefully conducted, considering the respective advantages and disadvantages of DNA-based and morphological techniques.     

Growing depth limit of <Emphasis Type="Italic">Zostera caulescens</Emphasis> in coastal waters along the Japan Sea coast of Honshu,Japan

There is a possibility that deep coastal marine macrophytes will be less critically affected by thermal stress associated with climate change and remain as refugia. Thus, information on them is expected to contribute to conservation of biodiversity in coastal areas affected by climate change. To document the deep-growing Zostera caulescens in relation to the light environment, field surveys were conducted in coastal waters of the central area along the Japan Sea coast of Honshu, Japan, and then the relationship between the light environment and seagrass depth limit was examined. In the coastal waters of Sado Island and Noto Peninsula, the presence of deep coastal communities of Z. caulescens was confirmed in the depth range of 20–25 m. Biomass and shoot density for Z. caulescens, ranging 34.1–51.3 g DW m^?2 and 83–112 shoots m^?2, were recorded at a depth of 20 m in Ryotsu Bay, Sado Island. For the genus Zostera including the deep-growing Z. caulescens, the relation between the extinction coefficient and seagrass depth limit was described by the fitted regression equation. The minimum light requirement of the deep-growing Z. caulescens was markedly lower than that of the shallow-growing Zostera marina.     

Value-per-recruit analysis of bighand thornyhead <Emphasis Type="Italic">Sebastolobus macrochir</Emphasis> caught off the Pacific coast of northern Honshu,Japan

The yield-per-recruit (YPR) analysis has been used to assess growth overfishing of exploited fish stocks. Since the ex-vessel price per weight widely depends on the size of the fish, the result of the YPR does not imply the revenue. The value-per-recruit (VPR) analysis, which is an economic expansion of the YPR analysis, was conducted for bighand thornyhead Sebastolobus macrochir caught off the Pacific coast of northern Honshu, Japan. The results showed that, for the current age at first capture (t _c = 3), the current fishing mortality (F = 0.12) was close to the optimum level. However, for the current F, optimum t _c in the VPR model was 8 years and would lead to a 47% increase compared to the current revenue. The maximum YPR was obtained at t _c = 6 years, but the revenue at t _c = 6 only gave a 20% increase in the maximum revenue. The difference was caused by the size dependency of the ex-vessel price per weight. The VPR model would generate fisheries management plans with both economical and biological consideration and would help in making general consensus of fisheries management strategies.     

Homogeneity of <Emphasis Type="Italic">Streptococcus dysgalactiae</Emphasis> from farmed amberjack <Emphasis Type="Italic">Seriola dumerili</Emphasis> in Japan

Streptococcus dysgalactiae strains have been isolated from cultured amberjack Seriola dumerili and yellowtail Seriola quinqueradiata in Japan. To characterize the fish isolates, we performed genetic analysis and compared the biochemical properties of these isolates with those of the S. dysgalactiae subsp. dysgalactiae and S. dysgalactiae subsp. equisimilis strains isolated from mammals. The genetic analysis revealed that the fish isolates were genetically very similar to each other with high DNA–DNA relatedness (>95.4%) and sequence homology. Meanwhile, the DNA relatedness between mammalian isolates and the fish isolates was 73.4–82.6%. In biased sinusoidal gel electrophoresis (BSFGE) analysis, the restriction patterns of mammalian isolates were different from those of fish isolates. The fish isolates did not show streptokinase activity in plasminogen obtained from mammals. These characteristics enabled us to distinguish between the fish isolates and the Sdd and Sde strains isolated from mammals. In order to obtain epidemiological information on the fish isolates, BSFGE patterns from 284 S. dysgalactiae strains from fish in Japan were examined. Based on the results of BSFGE analysis, the fish isolates were classified into 16 groups (AP1–AP16) with restriction enzyme ApaI. The dendrogram based on BSFGE analysis indicated that all fish isolates using in this study were closely related.     

Farming evaluation of the brownbow triploid hybrid (<Emphasis Type="Italic">Oncorhynchus mykiss</Emphasis><Emphasis Type="Italic">Salmo trutta</Emphasis>)

Triploid hybrids between female rainbow trout (Oncorhynchus mykiss Walbaum) and male brown trout (Salmo trutta L.) were tested for farming performances, with reference to parental species. The main drawback of hybrids lay in embryonic and larval mortalities, amounting to 60% on average, and displaying a large variability between spawns. Further survival was inferior to that of diploid, but similar to that of triploid rainbow trout. Hybrid body weight was intermediate between weights of rainbow and brown trout of the same age, mainly as a consequence of differences in precocious growth. Analysis of relative growth rates from 6 to 18 months showed that hybrids were surpassed by rainbow controls in common rearing, but not in separate rearing. Hybrid behaviour was similar to that of rainbow trout. These results are discussed in the scope of providing fisheries managers with original and sterile game fishes. An erratum to this article can be found at .     

Purification and properties of digestive lipases from Chinook salmon (<Emphasis Type="Italic">Oncorhynchus tshawytscha</Emphasis>) and New Zealand hoki (<Emphasis Type="Italic">Macruronus novaezelandiae</Emphasis>)

Lipases were purified from delipidated pyloric ceca powder of two New Zealand-sourced fish, Chinook salmon (Oncorhynchus tshawytscha) and hoki (Macruronus novaezelandiae), by fractional precipitation with polyethylene glycol 1000, followed by affinity chromatography using cholate-Affi-Gel 102, and gel filtration on Sephacryl S-300 HR. For the first time, in-polyacrylamide gel activity of purified fish lipases against 4-methylumbelliferyl butyrate has been demonstrated. Calcium ions and sodium cholate were absolutely necessary both for lipase stability in the gel and for optimum activity against caprate and palmitate esters of p-nitrophenol. A single protein band was present in native polyacrylamide gels for both salmon and hoki final enzyme preparations. Under denaturing conditions, electrophoretic analysis revealed two bands of 79.6 and 54.9 kDa for salmon lipase. It is proposed that these bands correspond to an uncleaved and a final form of the enzyme. One band of 44.6 kDa was seen for hoki lipase. pI values of 5.8 ± 0.1 and 5.7 ± 0.1 were obtained for the two salmon lipase forms. The hoki lipase had a pI of 5.8 ± 0.1. Both lipases had the highest activity at 35°C, were thermally labile, had a pH optimum of 8–8.5, and were more acid stable compared to other fish lipases studied to date. Both enzymes were inhibited by the organophosphate paraoxon. Chinook salmon and hoki lipases showed good stability in several water-immiscible solvents. The enzymes had very similar amino acid composition to mammalian carboxyl ester lipases and one other fish digestive lipase. The salmon enzyme was an overall better catalyst based on its higher turnover number (3.7 ± 0.3 vs. 0.71 ± 0.05 s⁻¹ for the hoki enzyme) and lower activation energy (2.0 ± 0.4 vs. 7.6 ± 0.8 kcal/mol for the hoki enzyme) for the hydrolysis of p-nitrophenyl caprate. The salmon and hoki enzymes are homologous with mammalian carboxyl ester lipases.     

Annual changes in distribution depths of bighand thornyhead <Emphasis Type="Italic">Sebastolobus macrochir</Emphasis> off the Pacific coast of northern Honshu,Japan

ABSTRACT:   Body size dependent distribution patterns of bighand thornyhead Sebastolobus macrochir were examined using bottom trawl surveys in the Tohoku area, off the Pacific coast of northern Honshu, Japan. In northern and southern Tohoku, distribution depths of ≤10-cm standard length (SL) fish increased from 500–600 m in 2003 to 600–700 m in 2005 with an increase in density of 11–20-cm SL fish at depths of 500–600 m. In 2004–2005, small fish (≤10 cm SL) were distributed in deeper waters than large fish (11–20 cm SL). In ≤20-cm SL fish, the main distribution depths changed from 300–600 m in 1997–2002 to 500–600 m in 2003 in southern Tohoku, but not in northern Tohoku. Stepwise multiple regression analysis showed that negative correlations were found in biomass densities between a few demersal fish species and bighand thornyhead at depths of 300–400 and 400–500 m in southern Tohoku. These results suggest that distribution of bighand thornyhead was affected by intra- and interspecific competitions in the Tohoku area.