Barley yellow dwarf virus in ryegrass and its detection by ELISA

The enzyme-linked immunosorbent assay (ELISA) effectively detected PAV- and MAV-like strains of barley yellow dwarf virus (BYDV) in ryegrass. MAV-like BYDV was found in a large proportion of ryegrass plants with foliar symptoms. There was a poor association between foliar symptoms and PAV-like virus, which occurred with similar frequency in plants with and without symptoms. By August 1982, plots of perennial, Italian and hybrid ryegrass sown at Auchincruive in 1980 were extensively infected with PAV- and MAV-like strains of BYDV. Tests on samples from 1981- and 1982-sown plots in August 1983 also indicated early invasion by BYDV. Infection levels of 7–80% were found in 13 commercial crops of perennial ryegrass surveyed near Auchincruive in May 1983. PAV-like BYDV occurred with greater frequency than did MAV-like strains of the virus.     

The incidence of strains of barley yellow dwarf virus in perennial ryegrass crops in south-west and central Scotland

The incidence of barley yellow dwarf virus (BYDV) in perennial ryegrass ( Lolium perenne ) crops in four areas of south-west and central Scotland was investigated between March 1988 and February 1989. BYDV was detected in 93·8% of the grass swards using an indirect enzyme-linked immunosorbent assay (ELISA). This enabled the seasonal periodicity of the BYDV strains to be monitored over 12 months for the first time in Scotland. The incidence of the RPV, PAV and MAV strains of BYDV declined between March and July 1988, before gradually rising in August. Incidence increased markedly in September, especially of the RPV and MAV strains, and then gradually decreased over the winter months, before stabilizing in February 1989. The incidence of the different strains in perennial ryegrass leys varied between geographical areas and between fields within areas. Most ryegrass samples contained a mixture of the three strains of BYDV. RPV was the most common strain in Ayrshire, while the incidence of PAV was highest in Wigtownshire and that of MAV was highest in Dumfriesshire and Stirlingshire. The incidence of BYDV increased with the age of the sward. The role of perennial ryegrass as a source of virus for the infection of cereals is discussed.     

New aphid vectors and efficiency of transmission of Potato virus A and strains of Potato virus Y in the UK

The aphid‐transmitted viruses Potato virus Y (PVY) and Potato virus A (PVA) commonly affect seed potatoes in the UK. The transmission efficiency for aphid species is used to calculate a potential transmission risk and is expressed as a relative efficiency factor (REF). These REFs have not previously been calculated for UK strains of viruses or aphid clones. Using a previously published method, REFs have been calculated for the aphid species and viruses commonly occurring in UK potatoes. The efficiency of transmission of Myzus persicae is nominally set to a REF of 1 and REFs for other species are calculated relative to this. These data represent the first set of REFs calculated for PVA transmission. Macrosiphum euphorbiae (REF 0.91) was almost as efficient as M. persicae at PVA transmission. The data were further analysed to compare transmission rates of PVY and PVA using a binomial (logit) generalized mixed model to take into account the potential influence of variation in virus titre between leaves. This approach found that there is little variation between the efficiency of transmission between clones of each aphid species or between strains within a virus species. This is a first report that Aphis fabae, Metopolophium dirhodum, Sitobion avenae, Acyrthosiphon pisum and Cavariella aegopodii have the ability to vector PVA. This study also represents a first report that C. aegopodii has the ability to vector PVY and confirms the potential of S. avenae, A. fabae, M. euphorbiae and Rhopalosiphum padi as important PVY vectors.     

Effects of barley yellow dwarf and ryegrass mosaic viruses alone and in combination on the productivity of perennial and Italian ryegrasses

Moderately severe strains of barley yellow dwarf virus (BYDV) and ryegrass mosaic virus (RMV) significantly reduced the heights and yields of perennial ( Lolium perenne ) and Italian (L. multifiorum) ryegrasses. BYDV caused greater reductions in perennial ryegrass than in Italian, whereas the converse was true of RMV. Both viruses together rarely caused greater damage than the most damaging virus on its own. BYDV reduced the aggressiveness of perennial ryegrass more than of Italian, whereas with RMV the converse was true. In mixtures of perennial and Italian ryegrasses, the perennial was suppressed by the Italian when only BYDV was present, the Italian was suppressed by the perennial when only RMV was present, and the status quo was maintained when both viruses were present, even though they reduced the yield of the mixture by over 16%.     

Reservoirs of plant virus disease: Occurrence of wheat dwarf virus and barley/cereal yellow dwarf viruses in Sweden

Non-crop plants such as grasses and volunteer plants are an inseparable part of the flora of crop fields and can influence virus incidence in crop plants. The presence of grasses as virus reservoirs can lead to a higher probability of virus incidence in crop plants. However, the role of reservoirs as an inoculum source in agricultural fields has not been well studied for many viral diseases of crops. Grasses have been found to constitute potential reservoirs for cereal-infecting viruses in different parts of the world. This study revealed that cereal-infecting viruses such as wheat dwarf virus (WDV), barley yellow dwarf viruses (BYDVs), and cereal yellow dwarf virus-RPV (CYDV-RPV) can be found among ryegrass growing in or around winter wheat fields. Phylogenetic analysis showed that a WDV isolate from ryegrass was a typical WDV-E isolate that infects wheat. Similarly, a ryegrass isolate of barley yellow dwarf virus-PAV (BYDV-PAV) grouped in a clade together with other BYDV-PAV isolates. Inoculation experiments under greenhouse conditions confirmed that annual ryegrass of various genotypes can be infected with WDV to a very low titre. Moreover, leafhoppers were able to acquire WDV from infected ryegrass plants, despite the low titre, and transmit the virus to wheat, resulting in symptoms. Information from the grass reservoir may contribute to improving strategies for controlling plant virus outbreaks in the field. Knowledge of the likely levels of virus in potential reservoir plants can be used to inform decisions on insect vector control strategies and may help to prevent virus disease outbreaks in the future.     

Response of UK winter wheat cultivars to <Emphasis Type="Italic">Soil-borne cereal mosaic</Emphasis> and <Emphasis Type="Italic">Wheat spindle streak mosaic viruses</Emphasis> across Europe.

Twenty-one UK winter wheat cultivars were grown over three seasons at sites with natural inoculum sources of Soil-borne cereal mosaic virus (SBCMV) and Wheat spindle streak mosaic virus (WSSMV) located in France, Italy and the UK. Plants were assessed visually for virus symptoms and leaf extracts were tested for the presence of each virus using enzyme-linked immunosorbent assays (ELISA). Cultivars showing little or no foliar symptoms and low levels of virus in leaf tissue were classified as resistant to each virus. All the trials were taken to harvest and agronomic data collected. At the most heavily infected sites, severe symptoms of SBCMV were observed in all UK cultivars except Aardvark, Charger, Claire, Cockpit, Hereward and Xi 19. The latter cultivars exhibited either light or no symptoms and little or no SBCMV infection in leaves. In fields with WSSMV, the virus failed to develop in Italy, but was detected in the leaves of all the susceptible control cultivars at a site in France. However, no UK cultivar tested positive for WSSMV. Multi-site analysis indicated that the presence of WSSMV did not increase the impact of SBCMV on the height, thousand-grain weight or yield of UK cultivars. The wheat cultivars on test gave a similar response to SBCMV across three European countries. Possible sources of SBCMV resistance are discussed.     

New developments in insecticide resistance in the glasshouse whitefly (Trialeurodes vaporariorum) and the two-spotted spider mite (Tetranychus urticae) in the UK

A recent survey of insecticide resistance in two of the most problematic pests in UK glasshouses revealed some new developments. At least some individuals in all UK samples of Trialeurodes vaporariorum that were tested resisted the insect growth regulator (IGR) buprofezin. The most strongly resistant strains were unaffected by the field application rate of this compound, and even samples from populations that had never been exposed to buprofezin contained individuals that survived the highest concentration applied (10,000 mg litre-1). The field rate of buprofezin was shown to select for resistance through vapour action alone. The benzophenylurea teflubenzuron, an unrelated IGR, was cross-resisted by buprofezin-resistant individuals. There was no evidence of resistance to imidacloprid, but all T vaporariorum strains tested, regardless of origin, exhibited a high innate tolerance to nicotine, when compared with another whitefly species, Bemisia tabaci. Marked resistance to fenbutatin oxide and tebufenpyrad was found in single glasshouse populations of Tetranychus urticae, but these compounds and abamectin appeared to remain highly effective against all other strains collected.     

Root exudation of diclofop-methyl and triasulfuron from foliar-treated durum wheat and ryegrass

In this study, we evaluated the release of diclofop-methyl and triasulfuron from the roots of foliar-treated ryegrass and wheat. The study with ¹⁴C-diclofop-methyl indicated a basipetal translocation of foliar-applied herbicide in wheat and ryegrass. No root exudation from ¹⁴C-diclofop-methyl-treated wheat plants was observed, while 20 days after treatment (DAT) 0.2–0.9% of radioactivity absorbed by ryegrass was found exuded in the growing medium. Root exudation was stimulated three to six times by the presence of untreated wheat or ryegrass sharing the growing medium with diclofop-methyl-treated ryegrass. No subsequent uptake of exuded radiolabel by untreated plants (ryegrass or wheat) in the same pot with ¹⁴C-diclofop-methyl-treated ryegrass was observed. The study with ¹⁴C-triasulfuron indicated a basipetal translocation of foliar-applied herbicide in wheat and ryegrass and also into the growing medium. By 20 DAT, 0.5–4.2% of radioactivity absorbed by wheat or ryegrass was found exuded in the growing medium. The presence of untreated plants (wheat or ryegrass) in the same pot as triasulfuron-treated ryegrass or wheat induced exudation seven to 32 times more. The study also revealed a subsequent uptake of exuded compounds by untreated wheat or ryegrass sharing the medium of ¹⁴C-triasulfuron-treated plants. This study has demonstrated for the first time that the root exudation of exogenous compounds can be related to plant arrangement in pots. The implication is that herbicide root exudation and transfer, a form of allelopathy, could be significant in the field. A precise estimation of environmental fate, unexpected ecological side effects and residual activity of herbicides may require quantification of such exudation.     

Mapping and Comparative Analysis of QTL for Crown Rust Resistance in an Italian x Perennial Ryegrass Population

ABSTRACT Crown rust (Puccinia coronata f. sp. lolli) is a serious fungal foliar disease of perennial ryegrass (Lolium perenne L.) and Italian ryegrass (L. multiflorum Lam.), which are important forage and turf species. A number of quantitative trait loci (QTL) for crown rust resistance previously were identified in perennial ryegrass under growth chamber or greenhouse conditions. In this study, we conducted a QTL mapping for crown rust resistance in a three-generation Italian x perennial ryegrass interspecific population under natural field conditions at two locations over 2 years. Through a comparative mapping analysis, we also investigated the syntenic relationships of previously known crown rust resistance genes in other ryegrass germplasms and oat, and genetic linkage between crown rust resistance QTL and three lignin genes: LpOMT1, LpCAD2, and LpCCR1. The interspecific mapping population of 156 progeny was developed from a cross between two Italian x perennial ryegrass hybrids, MFA and MFB. Because highly susceptible reactions to crown rust were observed from all perennial ryegrass clones, including two grandparental clones and eight clones from different pedigrees tested in this study, two grandparent clones from Italian ryegrass cv. Floregon appeared to be a source of the resistance. Two QTL on linkage groups (LGs) 2 and 7 in the resistant parent MFA map were detected consistently regardless of year and location. The others, specific to year and location, were located on LGs 3 and 6 in the susceptible parent MFB map. The QTL on LG2 was likely to correspond to those previously reported in three unrelated perennial ryegrass mapping populations; however, the other QTL on LGs 3, 6, and 7 were not. The QTL on LG7 was closely located in the syntenic genomic region where genes Pca cluster, Pcq2, Pc38, and Prq1b resistant to crown rust (P. coronata f. sp. avenae) in oat (Avena sativa L.) were previously identified. Similarly, the QTL on LG3 was found in a syntenic region with oat genes resistant to crown rust isolates PC54 and PC59. This indicates that the ortholoci for resistance genes to different formae speciales of crown rust might be present between two distantly related grass species, ryegrass and oat. In addition, we mapped four restriction fragment length polymorphism loci for three key ryegrass lignin genes encoding caffeic acid-O-methyltransferase, cinnamyl alcohol dehydrogenase, and cinnamoyl CoA-reductase on LG7. These loci were within a range of 8 to 17 centimorgans from the QTL on LG7, suggesting no tight linkage between them. The putative ortholoci for those lignin biosynthesis genes were identified on segments of rice (Oryza sativa L.) chromosomes 6 and 8, which are the counterparts of ryegrass LG7. Results from the current study facilitate understanding of crown rust resistance and its relationship with lignin biosynthesis, and also will benefit ryegrass breeders for improving crown rust resistance through marker-assisted selection.     

Fungally-transmitted viruses of cereals in the UK1

The distribution of two UK strains of barley yellow mosaic virus has been studied and both have been transmitted experimentally by Polymyxa graminis. cDNA hybridization studies support the suggestion that the strains should be considered distinct viruses. Oat mosaic and oat golden stripe (OGSV) viruses also occur in the UK. OGSV is a furovirus related to wheat soil-borne mosaic furovirus: it has particles of two lengths and a bipartite genome.     

Distribution and properties of geographically distinct isolates of sugar beet yellowing viruses

From a total of 261 yellow sugarbeet leaves collected from 10 countries representing three continents, the incidence and distribution of strains of Beet mild yellowing virus (BMYV), Beet chlorosis virus (BChV) and Beet yellows virus (BYV) were analysed using serological and molecular methods. BMYV was found in all countries except Greece, and more frequently in the northern and western areas of Europe, whereas BYV predominated in Turkey, Spain, Greece, the USA and Chile. BChV, originally found in the USA and the UK in 1989, was identified in France, Spain, the Netherlands and Chile. Nine sugar beet poleroviruses, plus a reference isolate of Turnip yellows virus (TuYV, syn. Beet western yellows virus ), were further characterized and compared. Isolates obtained from sugar beet infected this species, but not oilseed rape or lettuce; all isolates except one infected Capsella bursa-pastoris . The coat-protein sequences of these isolates were highly similar, with the consensus sequence representing 89% of nucleotide residues. Within the coat-protein gene, two regions were identified that could represent specific epitopes to which monoclonal antibody BYDV-PAV-IL-1 could bind; this antibody is used to distinguish beet poleroviruses in ELISA. Comparison of the sequences at the 5' end showed that sequence homology existed only between isolates with the same host range. The first sequence data of polerovirus isolates from Chile are presented, showing that the coat protein and the 5' end of their genomes are highly similar to those of BMYV isolates found in Europe. Chilean polerovirus isolates may have been imported from the northern hemisphere in sugar beet breeding material.     

Characterization of Distinct Tombusviruses that Cause Diseases of Lettuce and Tomato in the Western United States

A soilborne disease of lettuce, associated with necrosis and dieback, has been found with increasing frequency in California and Arizona over the last 10 years. An isometric virus, serologically related to Tomato bushy stunt virus (TBSV), was consistently isolated from lettuce plants with these disease symptoms. Back-inoculation to healthy lettuce plants and subsequent reisolation of the virus from symptomatic lettuce leaves suggested that this virus was the causal agent of this disease. A tombusvirus was also associated with a necrosis disease of greenhouse-grown tomatoes in Colorado and New Mexico. Complementary DNA representing the 3' end of viral genomic RNAs recovered from diseased lettuce and tomato plants had identical nucleotide sequences. However, these sequences were divergent (12.2 to 17.1%) from sequences of the previously described strains of TBSV, Petunia asteroid mosaic virus (PAMV), Artichoke mottled crinkle virus, and Carnation Italian ringspot virus. Additional tombusvirus isolates were recovered from diseased lettuce and tomato plants and these were most closely related to the TBSV-cherry strain (synonymous with PAMV) and to Cucumber necrosis virus based on comparison of 3'-end sequences (0.1 to 0.6% and 4.8 to 5.1% divergence, respectively). Western blot analysis revealed that the new tombusvirus isolated from diseased lettuce and tomato plants in the western United States is serologically distinct from previously described tombusvirus species and strains. Based on genomic and serological properties, we propose to classify this virus as a new tombusvirus species and name it Lettuce necrotic stunt virus.     

A Survey of Viruses of Alstroemeria in the UK and the Characterisation of Carlaviruses Infecting Alstroemeria

Alstroemeria samples collected in the UK were tested for a range of viruses using ELISA. Alstroemeria mosaic virus (AlMV), alstroemeria carlavirus (AlCV), lily symptomless virus (LSV), cucumber mosaic virus (CMV) and tobacco rattle virus (TRV) were detected either singly or in combination in 67.5% of 203 samples. AlCV and LSV isolates from Alstroemeria and lily were studied and characterised serologically using existing antisera, and by PCR, using primers to an 11kDa open reading frame (ORF) unique to carlaviruses and to the coat protein gene of LSV. Sequences of isolates of AlCV and LSV from the coat protein gene were 94–99% similar and were 99% similar in the 11kDa ORF, supporting the view that these are strains of the same virus.     

Sequence analysis of 43-year old samples of Plantago lanceolata show that Plantain virus X is synonymous with Actinidia virus X and is widely distributed

Plantain virus X was first recognized by the ICTV as a species in the genus Potexvirus in 1982. However, because no sequence was available for plantain virus X (PlVX), abolishing the species was proposed to the Flexiviridae working group of the ICTV in 2015. This initiated efforts to sequence the original isolates from Plantago lanceolata samples. Here we report the full-genome sequencing of two original isolates of PlVX, which demonstrate that the virus is synonymous to Actinidia virus X, a species previously reported from kiwifruit (Actinidia sp.) and blackcurrant (Ribes nigrum). PlVX was previously noted to be widespread in the UK in P. lanceolata. This report additionally presents novel data on the distribution and diversity of PlVX, collected at the same site as the original UK isolates, and from three independent surveys, two in the Netherlands and one in Belgium. This study also includes two new host records for PlVX, Browallia americana and Capsicum annuum (sweet pepper), indicating the virus is more widespread and infects a broader range of hosts than previously reported. This stresses the importance of surveys of noncultivated species to gain insight into viral distribution and host range. This study also demonstrates the value of generating sequence data for isolates retained in virus collections. Additionally, it demonstrates the potential value in prepublication data sharing for giving context to virus detections such as the four independent studies here which, when combined, give greater clarity to the identity, diversity, distribution, and host range of plantain virus X.     

Incidence of Acremonium lolii and lack of correlation with barley yellow dwarf viruses in Tasmanian perennial ryegrass pastures

The perennial ryegrass endophyte Acremonium lolii occurred in all ryegrass (Lolium perenne) pastures sampled in Tasmania. Cultivars tested included Ellett, Martlet, Tasdale, Tasmanian No. 1 and Victorian. The range in incidence was 4–94% (average 66%). Many pastures more than 4 years old caused perennial ryegrass staggers syndrome in livestock, and the range in incidence in these pastures was 79–94%. There was no correlation, positive or negative, between barley yellow dwarf virus infection and the incidence of A. lolii. There was good agreement between ELISA and microscopic examination of epidermal strips. However unlike previous studies, the ELISA test was specific for A. lolii and did not detect Acremonium coenophialum , the endophyte of tall fescue.     

Parietaria mottle virus, a possible new ilarvirus from Parietaria officinalis (Urticaceae)

A previously undescribed virus, probably a new member of the ilarvirus group, was isolated from Parietaria officinalis showing symptoms of yellow mosaic or mottling. This virus, for which the name parietaria mottle virus (ParMV) is proposed, differs in host range from other ilarviruses. ParMV was purified from Chenopodium quinoa by sap clarification with chloroform, and differential and sucrose density gradient centrifugation.
Purified particles were quasi-isometric to ovoid with diameters of about 24, 29 and 36 nm; no bacilliform particles were detected. Buoyant density in caesium chloride, determined on glutaraldehyde-fixed virus, was 1.35 g/cm³.
An antiserum to ParMV was obtained with a titre of 1:32 in agar gel double-diffusion tests. ParMV did not react with eight other viruses or virus strains belonging to the ilarvirus group or to pelargonium zonate spot virus.
Polyacrylamide gel electrophoresis indicated that ParMV contains a single major protein species of estimated molecular weight 24300 Da and four RNA species of estimated molecular weight 1 37, 1.19, 0.86 and 0.36 × 10⁶ Da.     

引起重庆主栽柑桔品种衰退病的病毒株系组群分析

 柑桔衰退病毒(CTV)存在着许多生物学特性不同的株系。通过铲除感染强毒株植株或利用弱毒株交叉保护的方式来防治柑桔衰退病都需要对CTV株系进行准确、可靠的鉴定。本文根据对CTV衣壳蛋白基因(CPG)的限制性片段长度多态性(RFLP)分析,发现在重庆主栽柑桔品种的衰退病毒主要以CP/Hinf I RFLP第1、3和6组群为主,并且在田间以多株系混合感染为主。     

Tomato infectious chlorosis virus — a new clostero-like virus transmitted byTrialeurodes vaporariorum

A previously undescribed virus disease of tomato, other crops and weed hosts was found in California. Affected tomato plants exhibited interveinal yellowing, necrosis and severe yield losses. Leaf dips and purified preparations contained closterovirus-like long flexuous, filamentous particles approximately 12×850–900 nm. The virus, designated as tomato infectious chlorosis virus (TICV), is transmitted in a semipersistent manner by the greenhouse whitefly,Trialeurodes vaporariorum. The host range of the virus is moderate (26 species in 8 plant families) but includes some important crops and ornamental species including tomato, (Lycopersicon esculentum), tomatillo (Physalis ixocarpa), potato (Solanum tuberosum), artichoke (Cynara scolymus), lettuce (Lactuca sativa) and petunia (Petunia hybrida). The virus has been found in a number of different locations in California and has a number of potential vehicles of movement including greenhouse grown ornamentals, tomato transplants, artichoke cuttings and potato seed. The virus has the potential to spread to other growing regions with resident populations of the greenhouse whitefly. The host range, particle size, insect transmission, and serology clearly distinguish TICV from previously described viruses.     

Occurrence of barley yellow dwarf virus in pastures of western France

As pasture grasses are preponderant in the agriculture of western France, their role as reservoirs of barley yellow dwarf virus (BYDV) and its aphid vectors has been studied from 1984 to 1986. Aphids were observed on most crops of five pasture grass species (brome grass, cocksfoot, tall fescue, Italian and perennial ryegrass) but in very low numbers. Rhopalosiphum padi was the most numerous species. The incidence of BYDV was high, with levels of infection ranging from 6 to 80% depending on the species of pasture grasses. Fescue pastures were highly infected with BYDV, whereas the virus was not detected in cocksfoot pastures. PAV-, RPV-, MAV-like isolates of BYDV were detected in pasture grasses, but RPV- and MAV-like isolates were only detected from ryegrass and brome grass, respectively. The role of these grasses as source of viruliferous aphids infecting cereals is discussed.     

Molecular characterization and detection of European isolates of Soil-borne wheat mosaic virus

Sequencing of a recently identified isolate of Soil-borne wheat mosaic virus (SBWMV) from the UK confirmed its identity as a European strain of the species and provided further evidence for taxonomic divisions in the group. Two RT–PCR protocols were developed for the detection of all SBWMV strains and for the specific detection of the European SBWMV strain, and were tested successfully on 21 isolates of SBWMV from a range of countries. Both protocols worked well using either purified total RNA in one- or two-step RT-PCR, or immunocapture (IC) RT–PCR. The sensitivity of IC RT-PCR was 100 times greater than ELISA. Neither set of primers produced any PCR product with either Wheat spindle streak mosaic virus or Wheat yellow mosaic virus which are frequently associated with SBWMV, or with the related viruses Indian peanut clump virus , Potato mop-top virus , Beet soil-borne virus and Beet necrotic yellow vein virus . This new diagnostic protocol will improve disease management by enabling correct identification of the causal pathogen and earlier detection than is possible serologically.