Modelling sea lice dispersion under varying environmental forcing in a Scottish sea loch

The spread of infectious larval sea lice, Lepeophtheirus salmonis (Krøyer, 1838), between wild salmonids and farmed Atlantic salmon, Salmo salar , remains a contentious area of uncertainty. However, as laboratory and field experiments increase our knowledge of sea lice behaviour under environmental forcing, numerical modelling tools can be used to predict the spread of infectious sea louse larvae from a point source. A three-dimensional numerical model has been developed and recently validated within Loch Torridon, a fjordic sea loch on the west coast of Scotland. Output from the numerical model is used to drive a particle tracking model which follows statistical representations of sea lice through the planktonic stages of a louse life cycle. By including maturation and mortality, the models can be used to predict the dispersion and transport of infectious sea lice from a point source and can be used to produce maps of infectivity under varying environmental conditions. Results highlight the importance of the wind-driven circulation for larval lice transport and suggest that local environmental conditions have considerable impact on the probability of sea lice infection spreading between wild and farmed fish populations.     

Potential disease interaction reinforced: double-virus-infected escaped farmed Atlantic salmon,Salmo salar L., recaptured in a nearby river

The role of escaped farmed salmon in spreading infectious agents from aquaculture to wild salmonid populations is largely unknown. This is a case study of potential disease interaction between escaped farmed and wild fish populations. In summer 2012, significant numbers of farmed Atlantic salmon were captured in the Hardangerfjord and in a local river. Genetic analyses of 59 of the escaped salmon and samples collected from six local salmon farms pointed out the most likely source farm, but two other farms had an overlapping genetic profile. The escapees were also analysed for three viruses that are prevalent in fish farming in Norway. Almost all the escaped salmon were infected with salmon alphavirus (SAV) and piscine reovirus (PRV). To use the infection profile to assist genetic methods in identifying the likely farm of origin, samples from the farms were also tested for these viruses. However, in the current case, all the three farms had an infection profile that was similar to that of the escapees. We have shown that double-virus-infected escaped salmon ascend a river close to the likely source farms, reinforcing the potential for spread of viruses to wild salmonids.     

Possibility of anisakid larvae infection in farmed salmon

SUMMARY: Nematodes belonging to the family Anisakidae including Anisakis simplex and Pseudoterranova decipiens are known to cause anisakiasis when their live larvae are ingested by humans. We estimated the possibility of anisakid infection to salmonids, farmed in sea net-pens at Onagawa Bay, Miyagi, Japan, in 1992, 1998 and 1999, by direct examination of the edible muscle and examination of the contents of the alimentary canal. From direct examination of the muscle, no nematode was found in the 249 farmed coho salmon Oncorhynchus kisutch and 40 farmed rainbow trout Oncorhynchus mykiss . In contrast, third-stage larvae of Anisakis simplex were found in seven of 14 wild coho salmon caught in Russia and all the 40 wild chum salmon Oncorhynchus keta caught at Nemuro and Kesennuma in 1998. The stomach and intestines of 521 farmed coho salmon and 40 farmed rainbow trout were examined carefully for the existence of possible carrier organisms such as crustaceans, fish or squid. Such carrier organisms were not found in the stomach and intestines of farmed fish. Thus, we conclude that the possibility of anisakid infection is very low in farmed salmonids.     

The effect of light on the settlement of the salmon louse, Lepeophtheirus salmonis, on Atlantic salmon, Salmo salar L

The salmon louse, Lepeophtheirus salmonis, is an ectoparasitic copepod that infests both wild and farmed salmonid fish. Salmon lice are a major disease problem in the farming of Atlantic salmon, Salmo salar L., and the possibility of salmon lice playing a role in the decline of wild anadromous stocks has also been raised. Lepeophtheirus salmonis can detect a range of stimuli (pressure/moving water, chemicals and light) in the external environment. However, the response thresholds to various stimuli, and the spatial and temporal scales over which they operate in the context of host location, are largely unknown. In this context, we attempted to determine whether salmon lice copepodids settle onto hosts more effectively, or at different locations on the fish's body, under different qualities of light. Lice settlement trials were conducted under three lighting conditions; L1: unpolarized under ultraviolet A (UVA)-through visible; L2: unpolarized without UVA (control); L3: 100% linearly polarized without UVA. A dark control was also conducted. No statistically significant difference in lice settlement was found. While changes in light intensity are involved in host detection at spatial scales on the order of metres, the results presented here suggest that it is not the primary sensory modality underlying host location at smaller spatial scales (cm to mm).     

Host tropism of infectious salmon anaemia virus in marine and freshwater fish species

The aquatic orthomyxovirus infectious salmon anaemia virus (ISAV) causes a severe disease in farmed Atlantic salmon, Salmo salar L. Although some ISA outbreaks are caused by horizontal transmission of virus between farms, the source and reservoir of the virus is largely unknown and a wild host has been hypothesized. Atlantic salmon are farmed in open net‐pens, allowing transmission of pathogens from wild fish and the surrounding environment to the farmed fish. In this study, a large number of fish species were investigated for ISAV host potential. For orthomyxoviruses, a specific receptor binding is the first requirement for infection; thus, the fish species were investigated for the presence of the ISAV receptor. The receptor was found to be widely distributed across the fish species. All salmonids expressed the receptor. However, only some of the cod‐like and perch‐like fish did, and all flat fish were negative. In the majority of the positive species, the receptor was found on endothelial cells and/or on red blood cells. The study forms a basis for further investigations and opens up the possibility for screening species to determine whether a wild host of ISAV exists.     

Sea lice, Lepeophtheirus salmonis, transfer between wild sympatric adult and juvenile salmon on the north coast of British Columbia, Canada

We examine sea lice, Lepeophtheirus salmonis , on juvenile and adult salmon from the north coast of British Columbia between 2004 and 2006 in an area that does not at present contain salmon farms. There is a pronounced zonation in the abundance of L. salmonis on juvenile pink salmon, Oncorhynchus gorbuscha , in the Skeena and Nass estuaries. Abundances in the proximal and distal zones of these estuaries are 0.01 and 0.05 respectively. The outer zones serve as feeding and staging areas for the pink salmon smolts. Returning Chinook, Oncorhynchus tshawytscha , and coho salmon, Oncorhynchus kisutch , concentrate in these areas. We collected data in 2006 to examine whether L. salmonis on returning adult salmon are an important source of the sea lice that appear on juvenile pink salmon. Nearly all (99%) of the sea lice on returning Chinook and over 80% on coho salmon were L. salmonis. Most of the L. salmonis were motile stages including many ovigerous females. There was a sharp increase in the abundance of sea lice on juvenile pink salmon smolts between May and July 2006 near the sites of adult captures. As there are no salmon farms on the north coast, few sticklebacks, Gasterosteus aculeatus , and very few resident salmonids until later in the summer, it seems that the most important reservoir of L. salmonis under natural conditions is returning adult salmon. This natural source of sea lice results in levels of abundance that are one or two orders of magnitude lower than those observed on juvenile pink salmon in areas with salmon farms such as the Broughton Archipelago.     

Real-time PCR detection of Parvicapsula pseudobranchicola (Myxozoa: Myxosporea) in wild salmonids in Norway

The myxozoan genus Parvicapsula contains 14 species infecting fish, some of which are known to cause severe disease in farmed and wild salmonids. Parvicapsula pseudobranchicola infections were first reported from seawater-reared Atlantic salmon, Salmo salar, in Norway in 2002 and have since then been an increasing problem. The present study describes a Taqman real-time PCR assay for specific detection of P. pseudobranchicola. The Taqman assay targets the 18S rRNA gene of P. pseudobranchicola and is able to detect as few as ten copies of the target sequence. Using the described assay, P. pseudobranchicola was detected in both farmed and wild salmonids, indicating that wild Atlantic salmon, sea trout, Salmo trutta, and Arctic char, Salvelinus alpinus, may be natural hosts of the parasite. Parvicapsula pseudobranchicola was found in samples from wild salmonids in the far south and the far north of Norway, displaying a wide geographic range of the parasite. Farmed salmonids showed P. pseudobranchicola infection levels many folds higher than that observed for wild sea trout, indicating that farmed Atlantic salmon are subjected to an elevated infection pressure compared with wild salmonids.     

Presence and genetic variability of Piscine orthoreovirus genotype 1 (PRV‐1) in wild salmonids in Northern Europe and North Atlantic Ocean

Piscine orthoreovirus genotype 1 (PRV‐1) is widespread in farmed Atlantic salmon (Salmo salar L.) populations in northern Europe, Canada and Chile. PRV‐1 occurs in wild fish in Norway and Canada; however, little information of its geographical distribution in wild populations is currently available, and the effect of PRV‐1 infection in wild populations is currently unknown. In this study, we present the findings of a survey conducted on 1,130 wild salmonids sampled in Denmark, Sweden, Ireland, Faroe Islands, France, Belgium and Greenland between 2008 and 2017. PRV‐1 is reported for the first time in wild salmonids in Denmark, Sweden, Faroe Island and Ireland. The annual PRV‐1 prevalence ranged from 0% in France, Belgium and Greenland to 43% in Faroe Islands. In total, 66 samples tested positive for PRV‐1, including Atlantic salmon broodfish returning to spawn and Atlantic salmon collected at the feeding ground north of Faroe Islands. The phylogenetic analysis of S1 sequences of the PRV‐1 isolates obtained in this survey did not show systematic geographical distribution. This study sheds light on the spread and genetic diversity of the virus identified in populations of free‐living fish and provides rationale for screening wild broodfish used in restocking programmes.     

Development of the use of wrasse to control sea lice on salmon farms in Ireland

Abstract. Developments in the use of wrasse as cleaner-fish in the control of sea lice ( Lepeophtheirus salmonis, Caligus elongatus ) in Ireland are reviewed. Corkwing, Symphodus melops , and goldsinny, Ctenolabrus rupestris , have controlled L. salmonis (<1 louse per salmon) on commercial farms. C. rupestris and rockcook, Centrolabrus exoletus , removed both adult and chalimus C. elongatus in aquarium trials. No egg-bearing lice were ever found on salmon in cages with wrasse, and numbers of mobile lice were maintained at <1 per salmon smolt.
Wrasse are fished using shrimp pots, optimally set for about 2 h. The fishery is seasonal and limited to >10cm wrasse occurring close to the farm, and distant from other farms. Localized reductions in the body length and numbers of wrasse have been detected in the second year of fishing in two areas respectively. Due to the fishery limitations and high fecundity of wrasse, impacts on wrasse populations should remain localized. All wrasse populations fished are screened for microbial diseases, and protozoan and metazoan parasites. Results are typical for wild marine fish but metazoan skin parasites are rare. No pathogens, including tests with an Aeromonas sp. found in wrasse, have been found to be transferable to salmon.
Wrasse are the only effective and continuous method of sea lice control legally available. Research efforts should be directed towards improving the availability, pathogen-free status, and husbandry of wrasse, to enable cleaner-fish technology to be more widely and efficiently utilized.     

Differences in Lepeophtheirus salmonis abundance levels on Atlantic salmon farms in the Broughton Archipelago, British Columbia, Canada

Sea lice data collected from Atlantic salmon farms in the Broughton Archipelago between 2003 and 2005 were examined for inter-regional differences in mobile Lepeophtheirus salmonis (Krøyer) abundance using the generalized linear model procedure. Factors such as age of the salmon populations, location of farms and time of year had a significant effect on the abundance of the mobile stages of L. salmonis whereas water temperature and salinity did not. Separate evaluation of SLICE® treatment data found no significant difference in treatment frequency among the areas but did show that there were significantly lower numbers of farm treatments during the summer months when compared with other seasons. The role of environment and wild fish in influencing sea lice abundance on the farmed salmon is discussed. The findings suggest that effective management programmes for sea lice should not only be based on geographical location but should take into account other factors which could influence lice abundance levels.     

Early development of resistance to the salmon louse, Lepeophtheirus salmonis (Krøyer), in juvenile pink salmon, Oncorhynchus gorbuscha (Walbaum)

This study examined the effect of fish weight on the susceptibility of post-emergent pink salmon to Lepeophtheirus salmonis (Krøyer). Three trials were conducted, each with two stocks of pink salmon, Oncorhynchus gorbuscha (Walbaum), at starting weights of c . 0.3, 0.7 and 2.4 g, respectively. In each trial, duplicate tanks of fish were exposed to 0, 25 (only in Trial 1), 50 or 100 copepodids per fish. Mortality in Trial 1 was c . 37%, regardless of stock following exposures to 50 or 100 copepodids. Mortalities occurred up to 26 days after exposure, and more than 80% of the lice on the dead fish were chalimus stages. Infections with adult or preadult lice were observed on c . 35% of fish surviving to 37 days after exposure. Mortality was 5% in Trial 2 and there was no mortality in Trial 3. The abundance of L. salmonis was lower in Trial 3 compared with Trials 1 or 2. Histological changes in the skin coincident with fish growth included a thickening of the epidermis, infiltration of the dermis with fibroblasts by the end of Trial 1 and the first evidence of scales by the end of Trial 2; scales were evident throughout Trial 3. These results showed that the previously reported innate resistance to L. salmonis displayed by pink salmon develops in fish heavier than 0.3 g and appears to be functional by 0.7 g. This resistance coincided with changes to the epidermis and dermis, including the formation of scales. The present results indicate that elevated risk associated with L. salmonis infection among migrating post-emergent pink salmon may occur during a relatively brief period before the fish reaches 0.7 g.     

Spatial and temporal distribution of Lepeophtheirus salmonis (Kr?yer) larvae in a sea loch containing Atlantic salmon, Salmo salar L., farms on the north-west coast of Scotland.

A plankton survey investigated spatial and temporal distributions of larval sea lice in a sea loch on the north-west coast of Scotland. Plankton tows were collected approximately weekly at two depths (0 and 5 m) at five sample stations over a 2-year period. The survey began in March 2002 when Atlantic salmon, Salmo salar L., farms in the study area stocked with fish and finished in March 2004, after farms completed harvesting. Over 90% of lice recovered were Lepeophtheirus salmonis (Kr?yer); therefore, the results of this paper refer largely to that species. The data were analysed using generalized additive models with explanatory variables for time, depth and station. Greatest densities of nauplii were recovered at stations adjacent to farms indicating that the local salmon farms were a likely source of larvae at times during the production cycle. There were significant temporal trends in larval densities and the stocking and harvesting of farms can possibly account for these increases and decreases, particularly at the start and at the end of the production cycle. The distribution of copepodids was more widespread than that of nauplii, indicating that the larvae can be transported several kilometres from the point of release.     

Dispersal of large farmed Atlantic salmon, Salmo salar, from simulated escapes at fish farms in Norway and Scotland

Abstract  Individually tagged farmed Atlantic salmon, Salmo salar L., were released from fish farms in simulated escapes in Scotland ( n  =   678) and Norway ( n  =   597) to compare migratory behaviour and dispersal. Large fish (510–870 mm fork length) were released to simulate the escape of aquaculture growers. Fish were released in spring and all recaptures of tagged fish were reported during summer and autumn of the year of release. Recapture rates were respectively 7.0 and 0.6% of the salmon released in Norway and Scotland, indicating a higher mortality or a lower exploitation or reporting rate for Scottish fish. Recaptures of Norwegian fish were all from Norway and mostly within 150 km of the release site; 64% were taken by anglers in fresh water. By contrast, the three salmon recaptured from the release in Scotland were reported from Norway (Hardangerfjord and Lofoten) and western Sweden (River Göta); two detached tags were found on beaches in Scotland north of the release site. These findings establish the capacity for long distance dispersal among escapees from aquaculture facilities and suggest a net easterly bias in long distance dispersal of salmon escaping from Scottish fish farms.     

Dominance and predator avoidance in domesticated and wild masu salmon Oncorhynchus masou

ABSTRACT:   Dominance, aggression and predator avoidance were compared among farmed, sea-ranched and wild juvenile masu salmon Oncorhynchus masou in laboratory experiments. Domesticated fish (farmed and sea-ranched), which had been exposed to artificial selection, were not dominant against wild fish in pairwise contests, nor did they show greater aggressiveness. Farmed fish did show greater feeding than wild fish. Under chemically simulated predation risk, farmed fish were more willing to leave cover and feed than wild fish, indicating reduced predator avoidance in the farmed fish. Our results indicate that selection for fast growth (domestication) in masu salmon favors fish that respond to food quickly and ignore predation risk.     

The prevalence of escaped farmed salmon, Salmo salar L., in the River Ewe, western Scotland, with notes on their ages, weights and spawning distribution

Abstract  The prevalence of escaped farmed Atlantic salmon, Salmo salar L., in the River Ewe, western Scotland, was assessed. After the establishment of smolt cages in the catchment and marine cages near the river mouth during 1986–1987, approximately 425 000 parr and smolts, and 122 000 growers have escaped. Between 1987 and 2001, farmed salmon occurred in the rod fishery in 13 of the 15 years, contributing at least 5.8% of the total catch, with a maximum annual frequency of 27.1%. It was estimated that <1% of fish escaping from the marine cages entered the river, but contributed at least 27% of potential anadromous spawners in 1997. Radiotagged, farmed fish in 2001 probably spawned in three subcatchments also used by tagged wild fish. Despite the likelihood of hybridisation there was no change in the median weight or marine age of wild fish, but smolt age decreased significantly ( P  < 0.02). The Ewe has a depleted wild salmon population (≤900 anadromous adults), and further genetic introgression by escapees should be prevented.     

Impact of stocked Atlantic salmon (Salmo salar L.) on habitat use by the wild population

Laffaille P. Impact of stocked Atlantic salmon (Salmo salar L.) on habitat use by the wild population.
Ecology of Freshwater Fish 2011: 20: 67–73. © 2010 John Wiley & Sons A/S Abstract – We investigated the summer habitat occupied by populations of young‐of‐the‐year wild and stocked (farmed populations released into the native range) Atlantic salmon under allopatric and sympatric conditions. Under allopatric conditions, farmed and wild salmon occupied habitats with the same characteristics. The salmon preferentially occupied the riffle areas. However, under sympatric conditions, the fish occupied meso‐ and micro‐habitats with different characteristics. Wild salmon avoided habitats used by farmed salmon and preferred glide areas with considerable vegetation cover. This study suggests that differences in the pattern of habitats used by young Atlantic salmon were both size‐ and origin‐dependent and may result from intra‐species competition between farmed and wild populations. Given that stocking with farmed Atlantic salmon is carried out intensively to enhance recreational angling or to conserve salmon populations, this study warns that this can have a negative impact on the extant wild Atlantic salmon population.     

A survey of salmon gill poxvirus (SGPV) in wild salmonids in Norway

In 2016, the Norwegian health monitoring programme for wild salmonids conducted a real‐time PCR‐based screening for salmon gill poxvirus (SGPV) in anadromous Arctic char (Salvelinus alpinus L.), anadromous and non‐anadromous Atlantic salmon (Salmo salar L.) and trout (Salmo trutta L.). SGPV was widely distributed in wild Atlantic salmon returning from marine migration. In addition, characteristic gill lesions, including apoptosis, were detected in this species. A low amount of SGPV DNA, as indicated by high Ct‐values, was detected in anadromous trout, but only in fish cohabiting with SGPV‐positive salmon. SGPV was not detected in trout and salmon from non‐anadromous water courses, and thus seems to be primarily linked to the marine environment. This could indicate that trout are not a natural host for the virus. SGPV was not detected in Arctic char but, due to a low sample size, these results are inconclusive. The use of freshwater from anadromous water sources may constitute a risk of introducing SGPV to aquaculture facilities. Moreover, SGPV‐infected Atlantic salmon farms will hold considerable potential for virus propagation and spillback to wild populations. This interaction should therefore be further investigated.     

Distributions of planktonic sea lice larvae Lepeophtheirus salmonis in the inter-tidal zone in Loch Torridon, Western Scotland in relation to salmon farm production cycles

This study examines the relative density of sea lice, Lepeophtheirus salmonis (Krøyer), larvae in the inter‐tidal areas of Loch Torridon, a fjordic sea loch in Western Scotland and the site of several commercial salmon farms. Samples of planktonic sea lice were collected in each spring from 1999 to 2003 near the mouth of the River Shieldaig, where sea trout have been shown to congregate in the first few days after going to sea, and from 2001 to 2003 near the mouth of the River Balgy. No larval sea lice were found near the mouth of the River Shieldaig in spring 2000 or 2002, when gravid female sea lice were absent on local fish farms. The same finding was observed in 2002 at the mouth of the River Balgy. In springs of 1999, 2001 and 2003, peak densities of larval sea lice of 33, 94 and 143 m^?3, respectively, were observed at the mouth of the river Shieldaig. At the mouth of the River Balgy, peak densities of 74 and 78 lice m^?3 were observed in 2001 and 2003 respectively. At the time these samples were collected, the two local salmon farms were in the second year of their production cycle and gravid female sea lice were present. Samples of larval sea lice were also obtained year round, at approximately weekly intervals, from a 50‐m transect at the mouth of the River Shieldaig, from March 2001 to June 2003, and compared with frequencies of gravid female sea lice on the two local salmon farms. High levels were found in the winter. No planktonic sea lice were found in this transect when gravid females were not present on the local fish farms.     

The effects of hydrogen peroxide treatment on different life-cycle stages of the salmon louse, Lepeophtheirus salmonis (Krøyer 1837)

The effects of hydrogen peroxide administered at a concentration of 1500 ppm for 20 min at 7.5 °C on different life-cycle stages of Lepeophtheirus salmonis were examined experimentally. The mobile adult and pre-adult stages of L. salmonis readily reattached to Atlantic salmon after hydrogen peroxide treatment. Adult female lice, but not adult males or pre-adults, reattached in significantly lower numbers than untreated controls. Survival of early chalimus stages (I and II) was not affected by hydrogen peroxide treatment, but their subsequent development to chalimus III and IV was delayed compared with untreated controls. Nauplii and copepodid larvae of L. salmonis were almost all dead by 1 hour post-treatment. A very few copepodids survived 24 h post-treatment. Egg strings of L. salmonis at an early stage of development failed to hatch after hydrogen peroxide treatment, but those with pigmented eggs did hatch, although in significantly reduced numbers. Treated egg strings did produce viable copepodids, although in significantly reduced numbers compared with controls.