Pleistocene shoreline sediments in coastal georgia: deposition and modification

New evidence invalidates the former concept that Pleistocene shorelines are "terrace" cut and fill structures. Comparison of Pleistocene and Holocene sediments with morpholo gy of the shoreline indicates that Pleisto cene deposits accumulated in barrier island environments and that the "ter races" are former lagoon-salt marshes. Stratigraphic evidence supports six ma jor Pleistocene shorelines below an elevation of 100 feet (30 meters).     

Whole-genome analysis of photosynthetic prokaryotes

The process of photosynthesis has had profound global-scale effects on Earth; however, its origin and evolution remain enigmatic. Here we report a whole-genome comparison of representatives from all five groups of photosynthetic prokaryotes and show that horizontal gene transfer has been pivotal in their evolution. Excluding a small number of orthologs that show congruent phylogenies, the genomes of these organisms represent mosaics of genes with very different evolutionary histories. We have also analyzed a subset of "photosynthesis-specific" genes that were elucidated through a differential genome comparison. Our results explain incoherencies in previous data-limited phylogenetic analyses of phototrophic bacteria and indicate that the core components of photosynthesis have been subject to lateral transfer.     

Climate modification by atmospheric aerosols

Theoretical considerations and empirical evidence indicate that atmospheric turbidity, a function of aerosol loading, is an important factor in the heat balance of the earth-atmosphere system. Turbidity increase over the past few decades may be primarily responsible for the decrease in worldwide air temperatures since the 1940's.     

Eukaryotes versus prokaryotes: an estimate of evolutionary distance

The divergence of nucleated organisms and bacteria was 2.6 times more remote in evolution than the divergences of the nucleated organisms into sparate kingdoms, as evidenced by genetic changes in cytochrome c and transfer RNA. The development of the genetic code through the differentiation of transfer RNA's for different amino acids was still more remote in evolution. The overall states of transfer RNA evolution in bacteria and nucleated organisms were comparable.     

Intron existence predated the divergence of eukaryotes and prokaryotes

Nucleotide sequences for the nuclear genes encoding chloroplast (GapA and GapB) and cytosolic (GapC) glyceraldehyde-3-phosphate dehydrogenases (GAPDHs) from Arabidopsis thaliana were determined. Comparison of nucleotide sequences indicates that the divergence of chloroplast and cytosolic GAPDH genes preceded the divergence of prokaryotes and eukaryotes. In addition, some intron-exon junctions are conserved among GapB, GapC, and chicken GAPDH genes. These results provide evidence at the molecular level to support the idea that introns existed before the divergence of prokaryotes and eukaryotes.     

根癌农杆菌介导的甘蔗遗传转化

综述开展甘蔗基因工程育种工作20多年来,从最初的利用农杆菌介导法研究抗除草剂和抗虫转基因成功,到目前高转化效率的转基因方法应用过程中取得的成果,分析影响农杆菌转化甘蔗的关键因素,并对农杆菌介导的甘蔗遗传转化研究前景作了展望.     

Antibody multispecificity mediated by conformational diversity

A single antibody was shown to adopt different binding-site conformations and thereby bind unrelated antigens. Analysis by both x-ray crystallography and pre-steady-state kinetics revealed an equilibrium between different preexisting isomers, one of which possessed a promiscuous, low-affinity binding site for aromatic ligands, including the immunizing hapten. A subsequent induced-fit isomerization led to high-affinity complexes with a deep and narrow binding site. A protein antigen identified by repertoire selection made use of an unrelated antibody isomer with a wide, shallow binding site. Conformational diversity, whereby one sequence adopts multiple structures and multiple functions, can increase the effective size of the antibody repertoire but may also lead to autoimmunity and allergy.     

Psychotomimesis mediated by kappa opiate receptors

The kappa opioid agonists are analgesics that seem to be free of undesired morphine-like effects. Their dysphoric actions observed with the kappa agonist cyclazocine are thought to be mediated by an action at sigma-phencyclidine receptors. The benzomorphan kappa agonist MR 2033 is inactive at sigma-phencyclidine receptors. In male subjects, the opiate-active (-)-isomer, but not the (+)-isomer, elicited dose-dependent dysphoric and psychotomimetic effects that were antagonized by naloxone. Thus, kappa opiate receptors seem to mediate psychotomimetic effects. In view of the euphorigenic properties of mu agonists, our results imply the existence of opposed opioid systems affecting emotional and perceptual experiences.     

Genomic sequencing of Pleistocene cave bears

Despite the greater information content of genomic DNA, ancient DNA studies have largely been limited to the amplification of mitochondrial sequences. Here we describe metagenomic libraries constructed with unamplified DNA extracted from skeletal remains of two 40,000-year-old extinct cave bears. Analysis of approximately 1 megabase of sequence from each library showed that despite significant microbial contamination, 5.8 and 1.1% of clones contained cave bear inserts, yielding 26,861 base pairs of cave bear genome sequence. Comparison of cave bear and modern bear sequences revealed the evolutionary relationship of these lineages. The metagenomic approach used here establishes the feasibility of ancient DNA genome sequencing programs.     

Chemical modification of carotid body chemoreception by sulfhydryls

Sulfhydryl reagents cause striking augmentation of the chemoreceptor responses of the carotid body to hypoxia. This indicates that a cellular plasma membrane protein with a reactive sulfhydryl group is a constituent part of the chemoreceptor architecture and provides a means of identification, localization, and isolation of the protein.     

Deletional tolerance mediated by extrathymic Aire-expressing cells

The prevention of autoimmunity requires the elimination of self-reactive T cells during their development and maturation. The expression of diverse self-antigens by stromal cells in the thymus is essential to this process and depends, in part, on the activity of the autoimmune regulator (Aire) gene. Here we report the identification of extrathymic Aire-expressing cells (eTACs) resident within the secondary lymphoid organs. These stromally derived eTACs express a diverse array of distinct self-antigens and are capable of interacting with and deleting na?ve autoreactive T cells. Using two-photon microscopy, we observed stable antigen-specific interactions between eTACs and autoreactive T cells. We propose that such a secondary network of self-antigen-expressing stromal cells may help reinforce immune tolerance by preventing the maturation of autoreactive T cells that escape thymic negative selection.     

Elemental mercury evolution mediated by humic Acid

Elemental mercury is formed in aqueous solution by the chemical reduction of mercuric ion in the presence of humic acid. The reduction proceeds via first order kinetics (rate constant, 0.009 hour-(1)) and is depndent on pH. The reaction mechanism involves interaction of the ionic metal species with the free radical electrons of the humic acid.     

Selective trafficking of non-cell-autonomous proteins mediated by NtNCAPP1

In plants, cell-to-cell communication is mediated by plasmodesmata and involves the trafficking of non-cell-autonomous proteins (NCAPs). A component in this pathway, Nicotiana tabacum NON-CELL-AUTONOMOUS PATHWAY PROTEIN1 (NtNCAPP1), was affinity purified and cloned. Protein overlay assays and in vivo studies showed that NtNCAPP1 is located on the endoplasmic reticulum at the cell periphery and displays specificity in its interaction with NCAPs. Deletion of the NtNCAPP1 amino-terminal transmembrane domain produced a dominant-negative mutant that blocked the trafficking of specific NCAPs. Transgenic tobacco plants expressing this mutant form of NtNCAPP1 and plants in which the NtNCAPP1 gene was silenced were compromised in their ability to regulate leaf and floral development. These results support a model in which NCAP delivery to plasmodesmata is both selective and regulated.     

发根农杆菌介导的杨梅遗传转化研究初报

为了建立发根农杆菌Agrobacterium rhizogenes介导的杨梅Myrica rubra遗传转化体系,利用携带拟南芥Arabidopsis thaliana LEAFYcDNA片段的发根农杆菌R15834感染东魁杨梅M. rubra‘Dongkui’和荸荠杨梅M. rubra‘Boji’的子叶、叶片和茎段。结果表明,只从东魁杨梅子叶上诱导出毛状根,而且产生毛状根的东魁杨梅子叶数在10%以下。杨梅子叶产生毛状根受多种因素影响,新种子比旧种子容易产生毛状根,在1/2 MS(Murashige and Skoog)培养基培养较在MS培养基上培养好。东魁杨梅子叶上的毛状根经聚合酶链反应(polymerase chain reaction,PCR)检测和Southern杂交检测,证实已将拟南芥的LEAFYcDNA片段成功导入并整合到东魁杨梅子叶中。图2参10