Habitat associations of bats in Northern Ireland: implications for conservation

Agricultural intensification in Northern Ireland has brought about large-scale changes to the landscape with a detrimental effect on biodiversity. Between 1996 and 1998, we surveyed a stratified random sample of 1 km squares for bats using a spot-sample technique and time expansion bat detector to establish linear and area habitat associations. Bats strongly selected water bodies with bankside vegetation, treelines, and deciduous and mixed woodland edge, avoiding open areas such as upland/unimproved grassland and improved grassland. Of three sympatric pipistrelle species (Pipistrellus pipistrellus, P. pygmaeus and P. nathusii), two were shown to forage in different habitats; P. pipistrellus being more of a ‘generalist’, foraging in a wider variety of habitats than P. pygmaeus, a ‘specialist’ which foraged in a smaller range of habitats. Nyctalus leisleri selected parkland/amenity grassland, deciduous woodland edge and rivers/canals and avoided improved grassland, hedgerows, whilst Myotis spp. selected deciduous woodland centre, lake/reservoir margins and rivers/canals. Reduction in area and quality of inland water, deciduous woodlands and field boundaries in Northern Ireland may impact on bat populations. Habitat management should focus on improving those habitats which are selected by bats, including the maintenance and enhancement of connecting linear habitats.     

Habitat selection of endangered and endemic large flying-foxes in Subic Bay, Philippines

Large flying-foxes in insular Southeast Asia are the most threatened of the Old World fruit bats due to high levels of deforestation and hunting and effectively little local conservation commitment. The forest at Subic Bay, Philippines, supports a rare, large colony of vulnerable Philippine giant fruit bats (Pteropus vampyrus lanensis) and endangered and endemic golden-crowned flying-foxes (Acerodon jubatus). These large flying-foxes are optimal for conservation focus, because in addition to being keystone, flagship, and umbrella species, the bats are important to Subic Bay’s economy and its indigenous cultures. Habitat selection information streamlines management’s efforts to protect and conserve these popular but threatened animals. We used radio telemetry to describe the bats’ nighttime use of habitat on two ecological scales: vegetation and microhabitat. The fruit bats used the entire 14,000 ha study area, including all of Subic Bay Watershed Reserve, as well as neighboring forests just outside the protected area boundaries. Their recorded foraging locations ranged between 0.4 and 12 km from the roost. We compared the bats’ use to the availability of vegetative habitat types, riparian areas, and bat trees. The fruit bats’ locations showed a preference for undisturbed forest types and selection against disturbed and agricultural areas. Bat locations also showed selection for particular fruiting/flowering bat trees. The bats showed strong preference for riparian areas; locations were in riparian areas over four times more than expected. From these results we recommend that management focus flying-fox conservation efforts on undisturbed forest and riparian areas.     

Molecular markers and ex situ conservation of the European elms (Ulmus spp.)

The enormous losses suffered by the European elms during recent Dutch elm disease outbreaks led to concern over the conservation of elm genetic resources, and the subsequent establishment of a series of ex situ collections. However, as ex situ collections are inevitably finite in size, some consideration needs to be given to selecting which samples to include in them. To contribute towards this process for European ex situ elm collections we have undertaken genetic studies on a Europe-wide sample of 535 individuals. A major aim has been to use genetic markers to clarify the identification of samples to ensure that the ex situ collections contain a representative spread of taxonomic diversity. This is important given the paucity of mature elms in the landscape due to Dutch elm disease. The lack of mature material (critical for identification) compounds identification problems in what was already a taxonomically difficult group. Our data (derived from random amplified polymorphic DNA and inter-simple sequence repeats) have provided a useful supplement to morphology in undertaking such sample identifications. The molecular data served to highlight mis-identified samples and led to extensive revisions of sample identities within individual countries. Our results were less useful in detecting regional intra-specific genetic structure, and do not provide sufficient information for prioritising within-species sample selections.     

Habitat selection by the pale-headed brush-finch (Atlapetes pallidiceps) in southern Ecuador: implications for conservation

The pale-headed brush-finch (Atlapetes pallidiceps) is threatened with extinction due to habitat loss, but very little is known about its ecological requirements. We used multiple logistic regression to study habitat selection of this species at landscape, territory, and nest site scales in order to make recommendations about effective management. Habitat selection by the sympatric stripe-headed brush-finch (Buarremon torquatus) was examined with the same methods in order to analyse interspecific resource partitioning and potential competition. The pale-headed brush-finch selected semi-open habitat types with intermediate scrub heights, and avoided forests. Nest sites depended on the presence of vines or bamboo. By contrast, the stripe-headed brush-finch chose dense habitat with low ground cover under tall vegetation and avoided semi-open habitat. The two species had overlapping territories but differed significantly in microhabitat use and the use of vegetation strata. We found no convincing evidence that the stripe-headed brush-finch displaces the pale-headed brush-finch from optimal habitat. The preservation of semi-open scrubland maintained by low-intensity grazing is suggested for future conservation of the pale-headed brush-finch.     

Sex matters: Modeling male and female habitat differences for jaguar conservation

Competition for mates, cub rearing, and other behaviors differ between males and females in large carnivores. Although these differences can be reflected in patterns of habitat use, gender has rarely been incorporated into habitat models. We evaluated differences in habitat use between male and female jaguars in the Mayan Forest of the Yucatan Peninsula by modeling occupancy as a function of land cover type, distance to roads, and sex. Nested models were fitted to high-spatiotemporal resolution satellite (GPS) telemetry, controlled for temporal autocorrelation, and eliminated selection bias of pseudo-absences using a semi-non-parametric bootstrap. Although both male and female jaguars prefer tall forest, short forest was also preferred by females but avoided by males. Whereas females significantly avoided roads, males didn’t and ventured into low-intensity cattle ranching and agriculture. Females’ preference for intact forests and against roads led to their habitat being fragmented to a greater degree than that of males. Models that ignored sexual differences failed to capture the effect of roads and agriculture on jaguar habitat use, blurred the distinction of use between short and tall forest, and underestimated fragmentation of female jaguar habitat; but incorporating these differences increased precision of habitat maps and allowed the identification of potential jaguar-human conflict areas associated with male’s use of cattle and agricultural lands. Specifying sex differences increases the power of habitat models to understand landscape occupancy by large carnivores, and so greater attention should be paid to these differences in their modeling and conservation.     

Habitat selection and conservation of Sharpe's longclaw (Macronyx sharpei), a threatened Kenyan grassland endemic

Montane grassland is a severely threatened habitat in Kenya. Despite a high level of faunal endemism, it has received very little conservation attention. We investigated habitat selection in a threatened grassland endemic bird species, Sharpe's longclaw (Macronyx sharpei) (family Motacillidae), in order to understand its likely response to land-use changes. Between November 1995 and May 1996, we studied 41 territories of this species on the Kinangop Plateau in central Kenya. With an overall density of 0.4 birds ha⁻¹, longclaws lived in permanent groups of two to seven individuals. They were sedentary and territorial, with a mean home range size of 0.5 ha. The species avoided non-grassland areas entirely, and within grassland showed a strong preference for short grass with tussocks. Territory sizes and foraging ranges were smaller, and rates of pecking for food higher, in this grassland type than in open short grass or long grass. Land use changes, in particular conversion to cultivation or woodlots and ploughing up of grassland to remove tussocks, pose a serious and immediate threat to this species. Dairy farming is potentially compatible with grassland conservation, and conservation-friendly livestock rearing needs to be promoted through economic incentives, awareness-raising and technical advice.     

Using habitat models to determine conservation priorities for pond-breeding amphibians in a privately-owned landscape of northern Idaho, USA

As rural landscapes experience increasing levels of residential development, the persistence of species that rely on them will depend on informed planning and management decisions. An understanding of habitat requirements is essential for setting priorities and developing landscape-level plans for the survival of these species. In many temperate rural landscapes, artificially created ponds may be the only wetlands available for aquatic reproduction by amphibians. The introduction of non-native fish into these ponds reduces survival and prohibits successful reproduction of many native pond-breeding amphibians. We surveyed 105 randomly selected wetlands in a primarily privately-owned, rural landscape in north Idaho, USA, for pond-breeding amphibian larvae in 2004 and 2005. We used an information theoretic multimodel inference and an algorithmic (random forests) approach to model habitat for each species based on local and landscape characteristics. We also used a mail survey to quantify how landowners value fish in their wetlands and their plans for future wetland development and fish stocking. Sixty-seven percent of pond owners reported that fishing in their pond was at least slightly important to them and 36% of owners indicated that they were at least 50% likely to add fish to their ponds in the next 5-10 years. Landscape change predictions for this area indicate that forests will become more open due to thinning; habitat models indicated that this is likely to be detrimental to long-toed salamanders and beneficial to Pacific treefrogs. Habitat models also indicate that Columbia spotted frog breeding sites consist of wetlands on flat ground with high solar insolation and that this species is sensitive to nearby development, indicating that as this landscape becomes further developed, this species may require habitat protection for persistence.     

Wild rabbit restocking for predator conservation in Spain

The decline of rabbit (Oryctolagus cuniculus) populations in Mediterranean Spain has been shown to be one of the main threats to rabbit-specialist predators such as the Iberian lynx (Lynx pardina) and the Spanish imperial eagle (Aquila adalberti), two species which are in serious danger of extinction. Consequently, corrective measures such as increasing rabbit populations by restocking have been carried out to help the recovery of predator populations. In order to determine the general applicability of rabbit restocking for predator conservation, we performed three experimental restockings and evaluated their success in relation to season, habitat quality and the number of animals introduced. Rabbits were released either in large or small numbers in all four seasons of the year, and in habitat types defined as `poor' or `rich' according to the food availability for rabbits. For each restocking we evaluated rabbit survival, degree of residency and expected population increase. As a rule, the highest restocking success occurred whenever smaller number of rabbits were released in the richest quality habitat. Restocking during the breeding season was less successful than in other seasons. Problems concerning intraspecific competition, reproductive failure and diseases are discussed.     

Using landscape suitability models to reconcile conservation planning for two key forest predators

Protection of area-limited species is an important component of plans to conserve biodiversity, but the habitat needs of such species can be different and important habitats may not align with existing reserves. We used empirically derived landscape suitability models for the spotted owl and the fisher to evaluate the overlap in habitat suitability for these two old forest-associated predators in an area of northern California affected by the Northwest Forest Plan (NWFP), a bioregional conservation plan. The area includes designated Wilderness areas and new reserves (Late-Successional Reserves, LSRs) established under the NWFP. We used the site selection algorithm MARXAN to identify priority habitat areas for each species, and for both combined, and to compare these areas with reserves. Sites were selected under two constraints, to achieve a threshold proportion of total habitat value and to select new areas equal to the total current area in existing reserves. The rank correlation between predicted value for the two species was low (0.11), because areas of highest predicted habitat value were more widely distributed for the owl. This difference also meant that the sites selected to optimize habitat value were more aggregated for fishers than owls, resulting in greater overlap of owl habitat and current reserves. To capture 25%, 50% and 75% of total habitat value for the owl required 14.0%, 29.2%, and 47.3% of the planning units, respectively; capturing the same for the fisher required only 5.3%, 13.5%, and 27.2%. A combined owl-fisher scenario resulted in areas that overlapped only ∼50% of existing reserves. The current location of LSRs may not be the best solution to maintaining well-connected habitats for these area-limited species in northwestern California. Whether LSRs are a better solution to protecting the diversity of other lesser-known taxa (i.e., salamanders and mollusks) is the subject of related work.     

An unseen foe in arthropod conservation efforts: The case of Wolbachia infections in the Karner blue butterfly

Infection by endosymbiotic bacteria is an underappreciated threat to endangered arthropods with serious implications for captive management programs. We examined the nature of Wolbachia infection in the North American endangered Karner blue butterfly, Lycaeides melissa samuelis, as a case study. Screening for Wolbachia across the range of the species confirmed widespread infection in the western half of the Karner blue’s range. Multilocus sequence typing using six genes confirmed that the infection in the western populations is attributable to a single strain of Wolbachia. This strain was also detected in the closely related Melissa blue butterfly, L. m. melissa, the presumed source of the infection. The infection in the Karner blue butterfly was perfectly correlated with the presence of a foreign mitochondrial DNA variant present in the Melissa blue butterfly, consistent with the hypothesis that the mitochondrial introgression was driven by the spread of Wolbachia. A single individual out of 71 screened from the eastern portion of the range of the Karner blue butterfly was also infected, however this infection was attributable to a different strain. Simulation models of the demographic effects of the spread of Wolbachia infection to uninfected populations and metapopulations suggest that such an infection might further reduce already small population sizes and substantially increase the probability of population extirpation. We discuss threats to other endangered arthropods in the light of this case study and make recommendations for minimizing the impact of endosymbiont infections in conservation plans, especially those including captive propagation and augmentation of endangered arthropod populations.     

Adaptive selection of foraging and nesting habitat by black kites (Milvus migrans) and its implications for conservation: a multi-scale approach

Black kites (Milvus migrans) are vulnerable and in decline within Europe. Here, we investigate selection of foraging and breeding habitat in a high-priority population in the Italian pre-Alps. Compared to a random distribution, kites foraged preferentially near water, over extensively managed grassland and within 1 km of nest-sites. Urban areas were positively selected near lakes but otherwise avoided. Foraging performance was higher over water than over terrestrial habitats. Kites nested on cliffs and trees and preferentially near water, far from paths and villages and in rugged and steep micro-sites. Tree-nests were located in the most mature tree in the stand. Productivity was positively related to the availability of water bodies. Therefore, food availability and human disturbance/persecution limited foraging and breeding performance. Guidelines to maintain or enhance current population levels include: (1) setting up reserves covering 10% of the areas within 1 km of large lakes; (2) converting current derelict coppice-woodland to high forest; and (3) enhancing subsidies for extensively managed grassland. Our results highlight the importance of cross-scale models integrating selection of foraging and breeding habitat and reinforce the importance of the spatial configuration of key resources for more realistic conservation management in mosaic landscapes.     

Estimating habitat suitability and potential population size for brown bears in the Eastern Alps

According to the Habitats Directive of the European Union, a favorable conservation status for the brown bear (Ursus arctos) should be targeted at the population level in large contiguous habitats such as the Alps, the largest mountain range in Europe. However, in most of the Alps brown bears are extinct and habitat suitability in these areas is often questionable. For this paper, radio-tracking data from four projects with 42 individual bears was compiled to assess habitat suitability. Discrete-choice models with random bear effects were fitted and compared to results obtained from compositional analysis and logistic regression. Sound definition of the available area in the discrete-choice model turned out to be essential. Brown bears showed a preference for forested and steep habitats and an avoidance of roads.Results from the three approaches were used to predict habitat suitability across the entire range of the Eastern Alps. Minimum potential population size was projected based on observed densities in Trentino and Central Austria, and ranged from 1228 to 1625 individuals, with 518–686 mature bears. This would satisfy a favorable conservation status. The developed methodology also has wide applicability to quantification of habitat suitability and potential population size in other cases where species are at risk.     

Efficiency of conservation shortcuts: an investigation with otters as umbrella species

The use of shortcuts is widespread in conservation practices to help ensure biodiversity conservation with minimal expenditures. An umbrella species is a species whose conservation confers protection to a large number of naturally co-occurring species. The aim of this study is to test the usefulness of the umbrella species concept for conservation management. As our umbrella, we chose a wide-ranging and flagship species, the European otter (Lutra lutra). Otters are widely distributed predators with numerous genera and species, so otter occurrence could virtually be used as “umbrella” in every freshwater habitat. To test the usefulness of the concept, we investigated whether an umbrella species might protect other species in the long term. We compared (1) bird and amphibian species richness in 1993 and in 2003 on nine sites where otters were monitored for 20 years, and (2) bird, amphibian and mollusc species richness between the previous sites and nine bio-equivalent sites where no otter occurrence has been detected for 20 years. The study was carried out for two spatial scales: total otter home range and core areas (most intensely exploited areas). Our results show that species richness was significantly different between years on sites inhabited by otters. However, we showed that biodiversity did not differ between pairs of bio-equivalent sites inhabited or deserted by otters, whatever the estimation method. Our results cast doubt on the validity of umbrella species use as an objective tool for conservation. However, the keystone functional role that otters could play in ecosystems might be an interesting way to reconsider the purpose of the umbrella species concept.     

Swarming of bats at underground sites in Britain—implications for conservation

We investigated the extent of visitation of underground sites during late summer and autumn (‘swarming’) by bats. Bats were captured at eight cave, mine and tunnel sites in southern England over 6 years (1995-2000). A total of 3077 bats representing 11 of Britain's 16 species was caught. Myotis bats predominated in autumn. At some sites these are rarely seen during winter hibernation counts. Myotis nattereri and M. daubentonii were most common. However, species composition changed seasonally. At one site, M. brandtii dominated early in the season and at all sites peak activity of M. daubentonii was earlier than in M. nattereri. Relatively high numbers of internationally vulnerable species such as M. bechsteinii and Barbastella barbastellus were recorded. There was a strong male bias in captures of swarming species. Swarming probably has an important reproductive function, most males are reproductively active at this time and such sites may be important for outbreeding. Due to this and the large number of individuals and species concerned, the conservation of ‘swarming sites’ is vitally important. Clearly swarming sites merit special consideration in conservation management strategies for cave-dwelling bats.     

Modelling hunting strategies for the conservation of wild rabbit populations

Recently, European wild rabbit (Oryctolagus cuniculus) populations have undergone a sharp decline that may be exacerbated by hunting. We investigate the effects of the timing of hunting on the conservation of wild rabbit using a model for rabbit population dynamics. Scenarios with different hunting rates and age strategies were simulated for different population qualities. We interviewed hunters to ascertain the degree to which they would accept a change in the timing of hunting. We also investigated the hunting pressure applied by hunters and its relationship with rabbit abundance. Modelling results indicate that the current hunting season has the greatest impact on rabbit abundance. Hunting in late spring optimises hunting extraction while conserving rabbit populations. When the rabbit population quality is low the effects of age strategies and the timing of hunting are less important than the effect of the hunting rate applied. Almost half the hunters would agree to policy changes. More than 75% of hunters implemented self-imposed hunting restrictions to improve rabbit populations, that were more frequently applied in high rabbit abundance areas. Therefore, changing the timing of hunting and increasing the participation of hunters in low abundance areas could optimise both the exploitation and the conservation of wild rabbit populations in southwestern Europe.     

Habitat requirements of passerines and reedbed management in southern France

Reedbeds have high conservation value in Europe. In southern France, they are the major breeding habitat of five passerine species. Yet, habitat management is done primarily by water control to serve socio-economic rather than conservation interests, because we lack information on the species' ecological requirements. Determinants of passerine abundance were assessed through a comparative analysis of water regime, plant structure, and arthropod (food) distribution at 12 sites consisting of at least 10 ha of marsh densely covered with common reed (Phragmites australis). Overall bird abundance estimated through standardised mist netting was positively correlated with food availability (sweep-netted arthropods weighted by their occurrence in birds' diet), which was in turn negatively correlated with duration of ground dryness between June and December. Abundance of four of the five bird species was associated with specific vegetation parameters (reed diameter, dry reed density, growing reed height, etc.), which could be associated with particular management practices, especially with regard to water levels and salinity. Potential impact of socio-economic activities through their water management is addressed, as well as possible ways to minimise these impacts.     

Habitat selection of the Eurasian woodcock in winter in relation to earthworms availability

The Eurasian woodcock (Scolopax rusticola) is a game species experiencing high hunting pressure, long-term modifications of its habitats, and with questions regarding its current conservation status. Winter is a season of highest concentration of birds and hunting pressure but woodcock precise habitat requirements are poorly known. It is crucial to assess threats and to develop sustainable management options for the conservation of woodcock populations. During three consecutive winters, we monitored 65 individual woodcocks fitted with radio-tags in Brittany, France. Habitat selection was analysed using GIS and compositional analysis, in relation to vegetation types, soil variables (humus types) and the abundance of their main prey (earthworms). Woodcocks used different habitats diurnally and nocturnally, generally preferring areas with high earthworm biomass. Diurnal habitat selection in forests was associated with humus type (preference for mulls, rich in earthworms) and dense shrub strata (better protection). Hedges with a high density of trees and shrub were also important habitat. At night, grazed meadows were the preferred habitat, containing five times higher biomass of earthworms compared to cultivated fields. Sustainable management of populations requires protection and management of habitats that incorporates food and cover. Forestry practices should preserve rich humus types and coppices by choosing tree species that ameliorate the soil and soil tilling. Changes in landscapes and intensive agricultural practices are current threats to woodcock populations: destruction of hedges, decrease of permanent grazed meadows, impoverishment of soils fauna biomasses from ploughing and chemical applications. However, woodcocks may benefit from the recent development of set-asides, grass field-borders and simplified farm practices (no-tillage and direct sowing).     

Habitat use and conservation of bumblebees (Bombus spp.) under different grassland management regimes

Declines in the natural populations of several bumblebee species across Britain and Europe are an increasing cause for concern. In this study the habitat use of bumblebees was investigated on Salisbury Plain Training Area, the largest remaining area of unimproved chalk grassland in north-west Europe. Habitat characteristics influencing the overall abundance, species richness and foraging activity of bumblebees included the diversity and abundance of flowering plant species (particularly of favoured forage plants such as Trifolium pratense), vegetation structure and height. It is suggested that different Bombus species respond to these habitat characteristics depending on their specific foraging and nesting requirements, the case of Bombus humilis being especially relevant. The effects of several grassland management practices were considered in terms of their suitability for the conservation of bumblebee habitats. Cattle grazing was shown to be preferable to both sheep grazing and the absence of any management, although the timing and intensity of such grazing was important. Small-scale disturbances caused by vehicle activity were also of value in producing locally abundant forage resources in less intensively managed grasslands.     

Dynamics of early wolf and cougar eradication efforts in Montana: implications for conservation

Bounty records from Montana (1902-1930) were used to better understand spatial and temporal response of wolves (Canis lupus) and cougars (Puma concolor) to an eradication program. Number of payments for wolves declined from a high of 4116 in 1903 to 0 by 1928. Numbers of cougar pelts fluctuated, but generally declined from 177 in 1908 to 2 in 1930. An inverse spatial relationship existed between density of payments for wolves and cougars. Payments for wolves were greatest in the Prairie ecoregion, while payments for cougars were greatest in the Montane. The ratio of pup to adult wolves also was greatest in the Prairie ecoregion and least in the montane. If distribution and frequency of bounty payments were a reflection of the distribution and abundance of wolves, populations were highest and most productive in areas where they currently do not occur.