Influence of water potential on nitrification and structure of nitrifying bacterial communities in semiarid soils

The objective of this study was to examine the relationship between soil water potential, nitrifier community structure and nitrification activity in semiarid soils. Soils were collected after a 5-month dry period (end of summer) and subsequently rewetted to specific water potentials and incubated for 7 days prior to analysis of nitrification activity and nitrifier community structure. The approach used in this study targeted a 491bp segment of the amoA gene which encodes the active site of the ammonia monooxygenase enzyme, which is the key enzyme for all aerobic ammonia oxidisers. amoA serves as a useful target for environmental studies since it is both specific and universal for all ammonia oxidisers and reflects the phylogeny of the ammonia oxidisers. Our results suggest that in semiarid soils water potential plays a key role in determining the structure of ammonia oxidising bacteria (AOB), and that additionally AOB community structure is correlated to potential nitrification rate in these soils.     

不同类型的污泥对土壤微生物性质的影响: 地中海退化土的田间试验研究

The recycling of suitable organic wastes can enhance soil fertility via effects on soil physical, chemical and biological properties. To compare the effects of digested (DS), thermally dried (TDS) and composted dewatered (CDS) sewage sludge on soil microbiological properties, an experiment was conducted at field sites for more than one year (401 d) when applied to two Mediterranean degraded soils (loam and loamy sand soils). All three types of sewage sludge had a significant effect on measured parameters. I...     

Heavy metal uptake by blue grama growing in a degraded semiarid soil amended with sewage sludge

Sewage sludge application to semiarid grassland may represent a beneficial means of utilizing this waste product for restoration of degraded sites. Consequently, dried municipal sewage sludge was applied at three rates (22.5, 45, and 90 Mg ha^–1) to a degraded semiarid grassland soil in order to determine the effects of sludge amendments on forage productivity, soil heavy metal content, and metal uptake by blue grama (Bouteloua gracilis).Soil and plant properties in control and amended plots were measured after 1, 2, and 5 growing seasons.Soil nutrients increased linearly with increased sludge application in the first two growing seasons. Consequently, forage quality and total production of blue grama improved significantly over the unamended control as the tissue levels of N, P, K, and crude protein increased. Cadmium and Pb in the sludge-treated plots did not increase significantly over the control after 1 and 2 growing seasons. Levels of DTPA-extractable soil micronutrients (Cu, Fe, Mn, Zn) increased linearly with increased sludge application rate to soil concentrations recommended for adequate plant growth. Soil N, P, and K concentrations remained higher in the sludge-amended soils after 5 growing seasons, while Cu and Cd increased to slightly above desireable limits as the soil pH decreased to 7.4 and 7.0 in the 45 and 90 Mg ha^–1 treatments, respectively. However, with the exception of Mn which remained within desirable limits, metal concentrations (including Cu and Cd) in blue grama tissue were not significantly different from the control treatment after five growing seasons. Based on soil and plant tissue metal concentrations, it appears that sludge applied at rates between 22.5 and 45 Mg ha^–1 will maintain the most favorable nutrient levels coupled with significant improvements in forage production in this semiarid grassland environment.     

Denitrification activity in the root zone of a sludge-amended desert soil

Summary We evaluated potential NO _inf3 ^sup- losses from organic and inorganic N sources applied to improve the growth of cotton (Gossypium hirsutum) on a Pima clay loam soil (Typic Torrifluvent). An initial set of soil cores (April 1989) was collected to a depth of 270 cm from sites in a cotton field previously amended with anaerobically digested sewage sludge or an inorganic N fertilizer. The denitrification potential was estimated in all soil samples by measuring N₂O with gas chromatography. Soils amended with a low or high rate of sludge showed increased denitrification activity over soil samples amended with a low rate or inorganic N fertilizer. All amended samples showed greater denitrification activity than control soils. The denitrification decreased with soil depth in all treatments, and was only evident as deep as 90 cm in the soils treated with the high sludge rate. However, when soils collected from depths greater than 90 cm were amended with a C substrate, significant denitrification activity occurred. These date imply that organisms capable of denitrification were present in all soil samples, even those at depths far beneath the root zone. Hence, denitrification was C-substrate limited. A second series of soil cores taken later in the growing season (July 1989) confirmed these data. Denitrification losses (under laboratory conditions) to a soil depth of 270 cm represented 1–4% of total soil N depending on treatment, when the activity was C-substrate limited. With additional C substrate, the denitrification losses increased to 15–22% of the total soil N.     

Responses of soil nitrous oxide production and abundances and composition of associated microbial communities to nitrogen and water amendment

Soil moisture and nitrogen (N) are two important factors influencing N₂O emissions and the growth of microorganisms. Here, we carried out a microcosm experiment to evaluate effects of soil moisture level and N fertilizer type on N₂O emissions and abundances and composition of associated microbial communities in the two typical arable soils. The abundances and community composition of functional microbes involved in nitrification and denitrification were determined via quantitative PCR (qPCR) and terminal restriction length fragment polymorphism (T-RFLP), respectively. Results showed that N₂O production was higher at 90% water-filled pore (WFPS) than at 50% WFPS. The N₂O emissions in the two soils amended with ammonium were higher than those amended with nitrate, especially at relatively high moisture level. In both soils, increased soil moisture stimulated the growth of ammonia-oxidizing bacteria (AOB) and nitrite reducer (nirK). Ammonium fertilizer treatment increased the population size of AOB and nirK genes in the alluvial soil, while reduced the abundances of ammonia-oxidizing archaea (AOA) and denitrifiers (nirK and nosZ) in the red soil. Nitrate addition had a negative effect on AOA abundance in the red soil. Total N₂O emissions were positively correlated to AOB abundance, but not to other functional genes in the two soils. Changed soil moisture significantly affected AOA rather than AOB community composition in both soils. The way and extent of N fertilizers impacted on nitrifier and denitrifier community composition varied with N form and soil type. These results indicate that N₂O emissions and the succession of nitrifying and denitrifying communities are selectively affected by soil moisture and N fertilizer form in the two contrasting types of soil.     

有机和无机肥配比对黄褐土硝化和反硝化微生物丰度及功能的影响

【目的】 土壤硝化与反硝化作用是氮循环的两个关键环节,本文研究不同比例的有机、无机肥配施对硝化和反硝化进程产生的影响,为高效施肥提供理论基础。 【方法】 在安徽农业大学农翠园试验基地的黄褐土上进行了小麦–玉米轮作田间试验。试验以不施氮肥为对照 (CK),在小麦、玉米总施氮量相同的条件下,设置5个处理,分别为单施无机肥 (T1)、无机肥∶有机肥 = 2∶1 (T2)、无机肥∶有机肥 = 1∶1 (T3)、无机肥∶有机肥 = 1∶2 (T4)、单施有机肥 (T5)。在小麦拔节期,取0—20 cm土壤样品,利用荧光定量PCR技术测定反硝化和氨氧化微生物丰度,并结合反硝化能力、N₂O/(N₂O+N₂) 产物比、土壤呼吸、硝化势和氨氧化细菌 (AOB) 与古菌 (AOA) 对硝化势相对贡献率的测定,分析江淮地区长期有机和无机肥配施对黄褐土硝化、反硝化微生物丰度及其功能的影响。 【结果】 单施无机肥或有机肥处理的硝化势均高于不同配比处理。与添加有机肥相比,增施无机肥会显著增加AOA的丰度和硝化贡献率。在反硝化方面,反硝化能力和土壤呼吸随着有机肥投入量的增加而增加,单施有机肥处理显著高于其它处理。nirS和nosZ型反硝化菌丰度随着有机肥的增加而增加,而nirK型反硝化菌丰度呈减少趋势。相关分析表明,反硝化能力与nirS型、nosZ型反硝化菌丰度、有机质和可溶性有机碳含量极显著正相关,与nirK相关性不强。 【结论】 与单施无机肥或有机肥处理相比,有机和无机肥适当配施可降低土壤硝化势,并能调控AOA和AOB在硝化过程中的作用,有效地降低土壤反硝化损失。      

水分和温度对旱地红壤硝化活力和反硝化活力的影响

采集第四纪红色粘土发育和第三纪红砂岩发育的红壤,分别在4C冰箱内保存(O),室温下湿润(M)和淹水(F)培养110天后测定硝化细菌、反硝化细菌、硝化势、反硝化势和反硝化酶活性。结果表明,低温有利于保持硝化细菌和反硝化细菌的数量,但显著抑制它们的硝化和反硝化活力。湿润有利于保持硝化细菌的硝化活力,而淹水则有利于保持反硝化细菌的反硝化活力,但均不利于硝化细菌和反硝细菌的存活。由此说明,不同的研究目的和需要测定的项目,应采用不同的土壤样本保存方法。     

尾矿池里添加大理石废料和有机物五年后植被覆盖和土壤生化特性研究

Tailing ponds pose environmental hazards,such as toxic metals which can contaminate the surroundings through wind and water erosions and leaching.Various chemical and biochemical properties,together with extractable and soluble metals were measured five years after reclamation of a polluted soil affected by former mining activities.This abandoned mine site contains large amounts of Fe-oxyhydroxides,sulphates,and heavy metals.As a consequence,soils remain bare and the soil organic matter content is low(< 3 g kg 1).Marble waste,pig manure and sewage sludge were applied in 2004.Plant cover and richness,and soil chemical,biochemical and biological parameters were analysed five years later.Results showed that all soil biochemical properties as well as vegetation cover and richness were higher in treated soils than in the untreated contaminated plots(control),although organic matter,pH values and extractable metals concentrations were similar among treatments.Soluble cadmium and zinc were lower in the amended plots than in control.As a general pattern,soil amended with pig manure showed higher values of most biochemical properties compared to sewage sludge application,while the doses did not have a great effect,being only significant for β-glucosidase,phosphodiesterase and arylsulfatase.Significant correlations were found between vegetation cover,richness and soil biochemical properties,suggesting a high interdependence between plant colonization and reactivation of biogeochemical cycles during five years.This study confirms the high effectiveness of an initial application of the amendments tested to initialize the recovery of ecosystems in bare mine soils under Mediterranean semiarid conditions.This research also shows the high sensitivity of certain biochemical properties in order to evaluate soil quality and reactivation of nutrients cycles in reclaimed mine soils.     

Nitrapyrin decreased nitrification of nitrogen released from soil organic matter but not amoA gene abundance at high soil temperature

Water pulses have a significant impact on nitrogen (N) cycling, making management of N challenging in agricultural soils that are exposed to episodic rainfall. In hot, dry environments, wetting of dry soil during summer fallow causes a rapid flush of organic matter mineralisation and subsequent nitrification, which may lead to N loss via nitrous oxide emission and nitrate leaching. Here we examined the potential for the nitrification inhibitor nitrapyrin to decrease gross nitrification at elevated temperature in soils with contrasting soil organic matter contents, and the consequent effects on ammonia oxidiser populations. Soil was collected during summer fallow while dry (water content 0.01 g g⁻¹ soil) from a research site with two management treatments (tilled soil and tilled soil with long-term additional crop residues) by three field replicates. The field dry soil (0–10 cm) was wet with or without nitrapyrin, and incubated (20 or 40 °C) at either constant soil water content or allowed to dry (to simulate summer drying after a rainfall event). Gross N transformation rates and inorganic N pools sizes were determined on six occasions during the 14 day incubation. Bacterial and archaeal amoA gene abundance was determined on days 0, 1, 7 and 14. Nitrapyrin increased ammonium retention and decreased gross nitrification rates even with soil drying at 40 °C. Nitrification was likely driven by bacterial ammonia oxidisers, as the archaeal amoA gene was below detection in the surface soil layer. Bacterial ammonia oxidiser gene abundances were not affected by nitrapyrin, despite the decrease in nitrifier activity. Increased soil organic matter from long-term additional crop residues diminished the effectiveness of nitrapyrin. The present study highlights the potential for nitrapyrin to decrease nitrification and the risk of N loss due to mineralisation of soil organic matter under summer fallow conditions.     

THE IMPACT OF ORGANIC AMENDMENTS ON FOREST SOIL PROPERTIES UNDER MEDITERRANEAN CLIMATIC CONDITIONS

Restoring the native vegetation is one of the most effective ways to control soil degradation in Mediterranean areas, especially in very degraded areas. In the initial months after afforestation, vegetation cover establishment and soil quality could be better sustained if the soil was amended with an external extra source of organic matter. The goal of this study was to test the effect of various organic amendments on select soil properties [soil organic carbon (SOC), pH, and electrical conductivity (EC)] over a 24‐month period. Four amendments were applied in an experimental set of plots: straw mulching (SM), mulch with chipped branches of Aleppo Pine (Pinus halepensis L.; PM), sheep manure compost (SH), and sewage sludge (RU). Plots were afforested following the same spatial pattern, and amendments were mixed with the soil at the rate 10 Mg ha⁻¹. Organic amendments helped maintain SOC over the initial 6 months after the afforestation. However, only the SM and PM treatments had increased SOC values after 24 months. Decreases in EC were found after the addition of SM, PM, and SH amendments. However, RU increased EC values 24 months after the afforestation. Variations in pH values were not sufficient to establish differences among the various treatments. Furthermore, the results show that forest soils with or without organic amendments responded similarly to the seasonal changes in Mediterranean conditions. Copyright © 2014 John Wiley & Sons, Ltd.     

Impact of urine and the application of the nitrification inhibitor DCD on microbial communities in dairy-grazed pasture soils

Tools to manage the emission of the greenhouse gas nitrous oxide (N₂O), an intermediate of both nitrification and denitrification, from soils are limited. To date, the nitrification inhibitor dicyandiamide (DCD) is one of the most effective tools available to livestock farmers for reducing N₂O emissions and minimizing leaching of nitrogen in response to increased urine deposition in grazed pasture systems. Despite its effectiveness in decreasing N losses from animal urine by inhibiting N processes in soils, the effect of DCD on the population structure of denitrifiers and overall bacterial community composition is still uncertain. Here we use three New Zealand dairy-grazed pasture soils to determine the effects of DCD application on microbial community richness and composition at both functional (genes involved in the denitrification process) and phylogenetic (overall bacterial community composition based on 16S rRNA profiling) levels. Results further confirm that the effects on microbial populations are minimal and transient in nature. The impact of DCD on microbial community structure was soil dependent, and a greater effect was attributed to intrinsic soil properties like soil texture, with community response to DCD in combination with urine being comparable to that under urine alone. Addition of DCD to cattle urine also reduced N₂O emission between 23 and 67%.     

Effects of organic and mineral amendments on available P and phosphatase activities in a degraded Mediterranean soil under short-term incubation experiment

The aim of this study was to determine the effects of mineral and organic-P-fertilizers on soil P availability, bacteria densities and phosphatase activities, in a degraded Mediterranean soil characterized by low level in soil organic matter and nutrients. A typical degraded Mediterranean soil, originating from a siliceous mineral parent material, was amended with different organic or mineral P-sources: aerobically digested sewage sludge (SS), with or without physico-chemical treatment by ferric chloride; sewage sludge compost (SSC); Na or K mineral P-salts (Pi-salts). All the amendments were carried out in order to provide soil with a P total quantity equivalent to 0.5 g P₂O₅/kg of soil. Bacterial density, phosphatase activities (i.e. acid (APH) and alkaline (BPH) phosphomonoesterases and phosphodiesterases), BPH/APH ratio, and available P (P Olsen) were measured after 25 and 87 days of incubation. Results showed that all the P-sources used to fertilize soil during this study resulted in significant increase in P concentration. However, different responses in phosphatase activities and bacterial densities were obtained with regards to the amendment applied to soil. Indeed, it appeared clearly that sewage sludge (SS) considerably stimulated soil biological activity, and more especially the different kinds of phosphatases involved in P mineralization and P turn-over. On the contrary, sewage sludge compost (SSC) as well as P-salts amendments did not affected these parameters in most cases. Results showed also that the incubation time influenced almost all the biological and chemical parameters investigated during this study. As a consequence, P availability was considerably improved in the amended soils between the two sampling dates.     

Organic and synthetic fertility amendments influence soil microbial,physical and chemical properties on organic and conventional farms

Field experiments were conducted to examine the effects of organic and synthetic soil fertility amendments on soil microbial communities and soil physical and chemical properties at three organic and three conventional vegetable farms in Virginia and Maryland in 1996 and 1997. Two treatments, including either an alternative organic soil amendment (composted cotton-gin trash, composted yard waste, or cattle manure) or synthetic soil amendment (fertilizer) were applied to three replicated plots at each grower field location. Production history and time affected propagule densities of Trichoderma species which remained higher in soils from organic farms. Propagule densities of Trichoderma species, thermophilic microorganisms, and enteric bacteria were also detected in greater numbers in soils amended with alternative than synthetic amendments, whereas propagule densities of Phytophthora and Pythium species were lower in soils amended with alternative than synthetic fertility amendments. Concentrations of Ca, K, Mg, and Mn were higher in soils amended with alternative than synthetic fertility amendments. Canonical correlations and principle component analyses indicated significant correlation between these soil chemical factors and the biological communities. First-order canonical correlations were more negative in fields with a conventional history, and use of synthetic fertilizers, whereas canonical correlations were more positive in fields with a history of organic production and alternative soil amendments. In the first year, yields of corn or melon were not different in soil amended with either synthetic or organic amendments at four of six farms. In the second year, when all growers planted tomatoes, yields were higher on farms with a history of organic production, regardless of soil amendment type. Alternative fertility amendments, enhanced beneficial soil microorganisms reduced pathogen populations, increased soil organic matter, total carbon, and cation exchange capacity (CEC), and lowered bulk density thus improving soil quality.     

Soil restoration in semiarid Patagonia: Chemical and biological response to different compost quality

Restoration of soils burned by a wildfire using composted amendments of different origin (biosolids and municipal organic wastes) and final particle size (screened and unscreened) was studied after 6 and 12 months of application in a field trial in semiarid NW Patagonia. Composts were applied at 40 Mg ha⁻¹. A fertilized treatment with soluble N (100 kg ha⁻¹) and P (35 kg ha⁻¹), and a non-treated control were also included. As indicators of soil response, chemical (electrical conductivity, pH, organic C, total N, extractable P), biological (potential microbial respiration, potential net N mineralization, N retained in microbial biomass) and physical (temperature and soil moisture) properties were evaluated. Plant soil cover was also estimated. Soil chemical and biological properties showed a high response to organic amendment addition, more evident after the wet season (12 months of application). Soil organic C, total N and extractable P increased significantly with biosolids composts (BC), and soil pH with municipal composts (MC). Potential microbial C respiration and net N mineralization were similar for both MC and BC, and significantly higher than in the control and the inorganic fertilized treatment; when calculated on C or N basis the highest values corresponded to MC. Results imply that in terms of organic C accretion, BC were more effective than MC due to higher amounts of total and recalcitrant C. Screened and unscreened composts did not differ significantly in their effects on soil properties. The increase of organic C with BC did not contribute to increase soil moisture, which was even higher in control plots after the wet season; higher plant cover and water consumption in amended plots could also explain this pattern. Inorganic fertilization enhanced higher plant cover than organic amendments, but did not contribute to soil restoration.     

A strategy for marginal semiarid degraded soil restoration: A sole addition of compost at a high rate. A five-year field experiment

This work evaluates the mid-term impact of the addition of large amounts of an organic amendment on the recovery of the physical, chemical and, particularly, the microbiological properties of a marginal semiarid degraded soil and on increasing the soil organic C pool. In order to perform this study, a semiarid degraded soil was treated with composted urban waste at doses equivalent to the addition of 1% (S + CCD1) and 3% (S + CCD2) of organic C (C_org). Changes in soil characteristics in the amended soils were evaluated with respect to a control soil without organic amendment for a period of 5 years after the organic amendment was applied. A spontaneous vegetal cover developed on both amended and unamended soils 3–4 months after the organic amendments were added, yet the level of vegetal biodiversity was lower in the amended plots. Compost-amended soils showed higher concentrations of C_org, water-soluble C and water-soluble carbohydrates than the control soil throughout the experimental period. Furthermore, all of these C fractions were significantly higher (p ≤ 0.05) in S + CCD2 than in S + CCD1 and the control soil. However, compost addition also increased soil electrical conductivity and nitrate content, particularly at the higher dose. Likewise, compost addition produced a 4- to 10-fold increase in soil heavy metal concentrations, although the levels of heavy metal were under the limits allowed in soils. Five years after the organic amendment was added, the soil water holding capacity, stable aggregate percentage, porosity and nutrient and humic substance and humic acid content were greater in amended soils than in control soil, and the higher dose produced greater increases than the lower dose. Soils receiving the highest dose of compost also showed the highest values of basal respiration, dehydrogenase activity and β-glucosidase and phosphatase activity, as well as a greater abundance of total PLFAs, bacterial and fungal PLFAs, and saturated and monounsaturated fatty acids. A greater level of functional diversity was also observed in amended soils, particularly in the soil receiving the higher dose of compost. It can be concluded that the addition of high doses of compost can be a suitable strategy for restoring semiarid degraded soils and for fixing C in these soils, provided that the organic material is of high quality and has a low concentration of heavy metals.     

Factors limiting denitrification in a Mediterranean riparian forest

In situ denitrification (DNT) and denitrification enzyme activity (DEA) were measured in a Mediterranean riparian forest soil during two periods under contrasting soil moisture conditions in order to investigate the factors that affect denitrification through the year. Results showed that in summer, soil moisture limited denitrification throughout the entire soil profile, whereas in winter, anaerobic conditions in the soil were more favourable for denitrifiers. The potential for denitrification was larger at shallow depths (<30 cm), and neither nitrate nor organic carbon limited denitrification significantly. Some denitrification was measured during winter at depths below 30 cm, suggesting that a reduction of groundwater nitrate could occur in some areas of this riparian forest during the wet period. In summer, low denitrification, together with high mineralization rates, brought about an increase of soil N, which could be leached to the stream channel during rainfall events. This study suggests that Mediterranean riparian soils act as sources or sinks of dissolved nitrogen depending on the period of the year.     

Wheat growth and yield responses to biochar addition under Mediterranean climate conditions

The effects of the addition of a slow pyrolysis biochar (produced from olive-tree prunings) to a vertisol were studied in a field experiment during one wheat (Triticum durum L.) growing season. The biochar addition did not significantly affect soil parameters such as pH, dissolved organic C and N, ammonium, nitrate or microbial biomass N. By contrast, biochar addition decreased soil compaction and increased the soil water-retention capacity and nutrient content (total N and the available contents of P, K, Mg, Cu and Zn). These favourable changes led to an increase in fine root proliferation (increasing specific root length and reducing root tissue density) and promoted crop development. As a result, the plants in biochar-treated plots showed higher relative growth and net assimilation rates, aboveground biomass and yield than those in control plots. Neither grain quality nor nutrient content were significantly affected by biochar addition. Our results suggest that the use of biochar as a soil amendment in agricultural soils can improve soil physical properties and increase fertility, favouring crop development under semiarid Mediterranean conditions.     

Mineralization and denitrification in upland, nearly saturated and flooded subtropical soil I. Effect of nitrate and ammoniacal nitrogen

 The influence of fertilizer N applied through nitrate and ammoniacal sources on the availability of nitrate, supply of C, and gaseous N losses via denitrification (using acetylene inhibition technique) in a semiarid subtropical soil (Typic Ustochrepts) was investigated in a growth chamber simulating upland [60% water-filled pore space (WFPS)], nearly saturated (90% WFPS), and flooded (120% WFPS) conditions. The rate of denitrification was very low in the upland soil conditions, irrespective of fertilizer N treatments. Increasing water content to nearly saturated and flooded conditions resulted in four- to sixfold higher rates of denitrification within 2 days, suggesting that the denitrifying activity commences quickly. Results of this study reveal that (1) under restricted aeration, these soils could support high rates of denitrification (∼6 mg N kg^–1 day^–1) for short periods when nitrate is present; (2) application of fertilizer N as nitrate enhances N losses via denitrification (∼10 mg N kg^–1 day^–1) – however, the supply of available C determines the intensity and duration of denitrification; (3) when fertilizer N is applied as an ammoniacal form, nitrification proceeds slowly and nitrate availability limits denitrification in flooded soil; (4) the nearly saturated soil, being partially aerobic, supported greater nitrification of applied ammoniacal fertilizer N than flooded soil resulting in higher relative rates of denitrification; and (5) under aerobic soil conditions, 26 mg mineral N kg^–1 accumulated in control soil over a 16-day period, demonstrating a modest capacity of such semiarid subtropical soils, low in organic matter, to supply N to growing plants. Received: 7 June 1999     

The effect of soil pH and dicyandiamide (DCD) on N2O emissions and ammonia oxidiser abundance in a stimulated grazed pasture soil

Purpose

Nitrous oxide (N₂O) is a potent greenhouse gas which is mainly produced from agricultural soils through the processes of nitrification and denitrification. Although denitrification is usually the major process responsible for N₂O emissions, N₂O production from nitrification can increase under some soil conditions. Soil pH can affect N₂O emissions by altering N transformations and microbial communities. Bacterial (AOB) and archaeal (AOA) ammonia oxidisers are important for N₂O production as they carry out the rate-limiting step of the nitrification process.

Material and methods

A field study was conducted to investigate the effect of soil pH changes on N₂O emissions, AOB and AOA community abundance, and the efficacy of a nitrification inhibitor, dicyandiamide (DCD), at reducing N₂O emissions from animal urine applied to soil. The effect of three pH treatments, namely alkaline treatment (CaO/NaOH), acid treatment (HCl) and native (water) and four urine and DCD treatments as control (no urine or DCD), urine-only, DCD-only and urine + DCD were assessed in terms of their effect on N₂O emissions and ammonia oxidiser community growth.

Results and discussion

Results showed that total N₂O emissions were increased when the soil was acidified by the acid treatment. This was probably due to incomplete denitrification caused by the inhibition of the assembly of the N₂O reductase enzyme under acidic conditions. AOB population abundance increased when the pH was increased in the alkaline treatment, particularly when animal urine was applied. In contrast, AOA grew in the acid treatment, once the initial inhibitory effect of the urine had subsided. The addition of DCD decreased total N₂O emissions significantly in the acid treatment and decreased peak N₂O emissions in all pH treatments. DCD also inhibited AOB growth in both the alkaline and native pH treatments and inhibited AOA growth in the acid treatment.

Conclusions

These results show that N₂O emissions increase when soil pH decreases. AOB and AOA prefer different soil pH environments to grow: AOB growth is favoured in an alkaline pH and AOA growth favoured in more acidic soils. DCD was effective in inhibiting AOB and AOA when they were actively growing under the different soil pH conditions.     

Nitrogen transformations in cold and frozen agricultural soils following organic amendments

Though microbial activity is known to occur in frozen soils, little is known about the fate of animal manure N applied in the fall to agricultural soils located in areas with prolonged winter periods. Our objective was to examine transformations of soil and pig slurry N at low temperatures. Loamy and clay soils were either unamended (Control), amended with ¹⁵NH₄-labeled pig slurry, or amended with the pig slurry and wheat straw. Soils were incubated at −6, −2, 2, 6, and 10 °C. The amounts of NH₄, NO₃ and microbial biomass N (MBN), and the presence of ¹⁵N in these pools were monitored. Total mineral N, NO₃ and ¹⁵NO₃ increased at temperature down to −2 °C in the loam soil and −6 °C in the clay soil, indicating that nitrification and mineralization proceeded in frozen soils. Nitrification and mineralization rates were 1.8-4.9 times higher in the clay than in the loamy soil, especially below freezing point (3.2-4.9), possibly because more unfrozen water remained in the clay than in the loamy soil. Slurry addition increased nitrification rates by 3-14 times at all temperatures, indicating that this process was N-limited even in frozen soils. Straw incorporation caused significant net N immobilization only at temperatures ≥2 °C in both soils; the rates were 1.4-3.4 higher in the loam than in the clay soil. Nevertheless, up to 30% of the applied ¹⁵N was present in MBN at all temperatures. These findings indicate that microbial N immobilization occurred in frozen soils, but was not strong enough to induce net immobilization below the freezing point, even in the presence of straw. The Q₁₀ values for estimated mineralization and nitrification rates were one to two orders-of-magnitude larger below 2 °C than above this temperature (13-208 versus 1.5-6.9, respectively), indicating that these processes are highly sensitive to a small increase in soil temperature around the freezing point of water. This study confirms that net mineralization and nitrification can occur at potentially significant rates in frozen agricultural soils, especially in the presence of organic amendments. In contrast, net N immobilization could be detected essentially above the freezing point. Our results imply that fall-applied N could be at risk of overwinter losses, particularly in fine-textured soils.