The genetic analysis of resistance to fusarium crown and root rot of tomato

The tomato line IRB-301-31, resistant to fusarium crown and root rot ( Fusarium oxysporum f.sp. radicis-lycopersici ) was crossed with two susceptible cultivars, Motelle and Earlypak No. 7. When F₁, F₂ and backcross progenies were inoculated at the one-leaf stage with a suspension of spores of the pathogen, all could be classified as either resistant (healthy) or susceptible (dead). The ratios of resistant to susceptible plants indicated that resistance was conferred by a single dominant gene, designated Fr1.     

Fusarium species and chemotypes associated with fusarium head blight and fusarium root rot on wheat in Sardinia

Environmental conditions in Sardinia (Tyrrhenian Islands) are conducive to fusarium root rot (FRR) and fusarium head blight (FHB). A monitoring survey on wheat was carried out from 2001 to 2013, investigating relations among these diseases and their causal agents. FHB was more frequently encountered in the most recent years while FRR was constantly present throughout the monitored period. By assessing the population composition of the causal agents as well as their genetic chemotypes and EF‐1α polymorphisms, the study examined whether the two diseases could be differentially associated to a species or a population. Fusarium culmorum chemotypes caused both diseases and were detected at different abundances (88% 3‐ADON, 12% NIV). Fusarium graminearum (15‐ADON genetic chemotype) appeared only recently (2013) and in few areas as the causal agent of FHB. In F. culmorum, two haplotypes were identified based on an SNP mutation located 34 bp after the first exon of the EF‐1α partial sequence (60% adenine, 40% thymine); the two populations did not segregate with the chemotype but the A‐haplotype was significantly associated with FRR in the Sardinian data set (P = 0·001), suggesting a possible fitness advantage of the A‐haplotype in the establishment of FRR that was neither dependent on the sampling location nor the sampling year. The SNP determining the Sardinian haplotype is distributed worldwide. The question whether the A‐haplotype segregates with characters facilitating FRR establishment will require further validation on a specifically sampled international data set.     

Cytological aspects of compost-mediated induced resistance against fusarium crown and root rot in tomato

ABSTRACT The potential of a pulp and paper mill residues compost for the control of crown and root rot of greenhouse-grown tomato caused by Fusarium oxysporum f. sp. radicis-lycopersici was ultrastructurally investigated. Peat moss amended with compost substantially reduced disease-associated symptoms. Addition of Pythium oligandrum to either peat moss alone or peat moss amended with compost resulted in a considerable reduction in disease incidence compared with controls grown in peat moss alone. Histological and cytological observations of root samples from Fusarium-inoculated plants revealed that the beneficial effect of compost in reducing disease symptoms is associated with increased plant resistance to fungal colonization. One of the most prominent facets of compost-mediated induced resistance concerned the formation of physical barriers at sites of attempted fungal penetration. These structures, likely laid down to prevent pathogen ingress toward the vascular elements, included callose-enriched wall appositions and osmiophilic deposits around the sites of potential pathogen ingress. Invading hyphae, coated by the osmiophilic material, showed marked cellular disorganization. The use of the wheat germ agglutinin-ovomucoid-gold complex provided evidence that the wall-bound chitin was altered in severely damaged hyphae. A substantial increase in the extent and magnitude of the cellular changes induced by compost was observed when P. oligandrum was supplied to the potting substrate. This finding corroborates the current concept that amendment of composts with specific antagonists may be a valuable option for amplifying their beneficial properties in terms of plant disease suppression.     

Combining nonpathogenic strains of Fusarium oxysporum with sodium chloride to suppress fusarium crown rot of asparagus in replanted fields

Nonpathogenic strains of Fusarium oxysporum (NPFO) were tested alone, and in combination with rock salt (NaCl), for their ability to suppress fusarium crown and root rot of asparagus in replanted fields. Five NPFO strains were first screened with and without NaCl in the glasshouse using autoclaved asparagus soil mixed with potting mix. Asparagus roots were treated with NPFO suspensions or water, then inoculated 1 week later with pathogenic F. oxysporum ; then after 1 week pots received 100 mL 1% NaCl or water. After 12 weeks the NPFO strain CS-20 increased root weight when compared with controls. Rock salt did not affect root growth. Root lesions were reduced relative to the control by all NPFO strains and by NaCl applications, but there were no interactions between NPFO and NaCl. The NPFO strains CS-20, CWB 314 and CWB 318 were compared with no treatment in two 4-year replanted field studies in Hamden, and Windsor, CT, USA. Crowns were treated with NPFO at planting, and NaCl was broadcast at 280 kg ha⁻¹, and at 560 kg ha⁻¹ in later years. CWB 318 reduced disease at both sites and increased marketable yield in Hamden. Treatment with NaCl increased yield by 29% over controls in Windsor, but did not increase yield in Hamden. Recovered root isolates of F. oxysporum categorized by heterokaryon tests revealed that, in the glasshouse, CS-20 colonized roots better than other strains, while CWB 318 was the only strain found on roots from field plots after 4 years. Applications of NaCl did not hinder the suppressive ability of the nonpathogenic strains. The perennial nature of asparagus may require that nonpathogenic strains possess superior survival traits along with biocontrol traits.     

Fusarium spp. as a cause of crown and root rot of asparagus in Greece

Specimens of diseased asparagus (108) were selected from 17 fields in northern Greece. The asparagus crowns showed limited or widespread brown discoloration or extensive internal rot with fibrous tissues. A red-brown discoloration was also observed on the roots and, in a serious infection, most of the roots were totally destroyed and only their epidermis and ribbon-like central axis remained. 68 strains of Fusarium proliferatum , 25 of F. oxysporum , 19 of F. solani , and 1 strain of Rhizoctonia solani were isolated from crowns and roots. Single-spore isolates were subcultured from 50 strains of F. proliferatum , 21 of F. oxysporum and 7 of F. solani. These isolates were evaluated for pathogenicity by inoculating cultivar UC157F₁ of asparagus in an in vitro agar test-tube assay for 21 days at 29–32°C, with a light period of 16 h. Isolates of F. proliferatum and F. oxysporum were found to be the most pathogenic. The pathogenic F. oxysporum isolates were characterized as f.sp. asparagi.     

Spatial distribution and temporal development of fusarium crown and root rot of tomato and pathogen dissemination in field soil

ABSTRACT The spatial distribution and temporal development of tomato crown and root rot, caused by Fusarium oxysporum f. sp. radicis-lycopersici, were studied in naturally infested fields in 1996 and 1997. Disease progression fit a logistic model better than a monomolecular one. Geostatistical analyses and semivariogram calculations revealed that the disease spreads from infected plants to a distance of 1.1 to 4.4 m during the growing season. By using a chlorate-resistant nitrate nonutilizing (nit) mutant of F. oxysporum f. sp. radicis-lycopersici as a "tagged" inoculum, the pathogen was found to spread from one plant to the next via infection of the roots. The pathogen spread to up to four plants (2.0 m) on either side of the inoculated focus plant. Root colonization by the nit mutant showed a decreasing gradient from the site of inoculation to both sides of the inoculated plant. Simulation experiments in the greenhouse further established that this soilborne pathogen can spread from root to root during the growing season. These findings suggest a polycyclic nature of F. oxysporum f. sp. radicis-lycopersici, a deviation from the monocyclic nature of many nonzoosporic soilborne pathogens.     

Biological control of fusarium crown and root rot of tomato with antagonistic bacteria and integrated control when combined with the fungicide carbendazim

Two bacterial isolates, Bacillus megaterium (c96) and Burkholderia cepacia (c91), demonstrated to be antagonistic against Fusarium oxysporum f.sp. radicis-lycopersici , the causal organism of fusarium crown and root rot of tomato, were evaluated as biocontrol agents alone and when integrated with the fungicide carbendazim. In an initial screening, these isolates reduced disease incidence by 75 and 88%, respectively. In vitro , both biocontrol agents were highly tolerant to the fungicide carbendazim, commonly used to control fusarium diseases. Carbendazim reduced disease symptoms by over 50% when used at > 50  µ g mL⁻¹, but had little effect at lower concentrations. Combination of the bacterial isolates and carbendazim gave significant ( P  ≤ 0·05) control of the disease when plants were artificially inoculated with the pathogen. Application of carbendazim at a low concentration (1  µ g mL⁻¹) in combination with B. cepacia c91 reduced disease symptoms by 46%, compared with a reduction of 20% obtained with the bacterium alone and no control with the chemical treatment alone. A combination of B. megaterium c96 with an increased application rate of 10  µ g mL⁻¹ carbendazim significantly reduced disease symptoms by 84% compared with inoculated controls and by 77% compared with carbendazim treatment alone. In this experiment, the integrated treatment also slightly outperformed application of 100  µ g mL⁻¹ carbendazim, and bacteria applied without fungicide also provided good disease control.     

Trichothecene production is detrimental to early root colonization by Fusarium culmorum and F. graminearum in fusarium crown and root rot of wheat

Fusarium culmorum (Fc) and F. graminearum (Fg) belong to the predominant causal agents of fusarium crown and root rot (FCR) in wheat. While many studies have been done to investigate crown rot, including stem base infection, root colonization and mycotoxin production associated with root rot is not well understood. In this study the impact of mycotoxins on the colonization of wheat roots and stem bases was analysed by using Fc and Fg isolates that varied in both quantity and types of trichothecenes they produce. Seedling inoculations in growth chambers with a high deoxynivalenol (DON)- and 3-acetyldeoxynivalenol (3ADON)-producing isolate led to more severe symptoms and 20-times greater colonization of the stem base, as measured by Fc DNA accumulation, than isolates that produced less DON/3ADON. In contrast to stem base colonization, in vitro inoculations of roots with a Tri5 deletion mutant deficient in Fg trichothecene production led to three-times higher colonization than the wildtype. Furthermore, an Fc isolate that produced low levels of zearalenone resulted in twice the level of colonization of a high DON/3ADON-producing isolate included in the study. When root inoculation with a low DON/3ADON-producing Fc isolate was supplemented with exogenous DON, DON production decreased by more than half per unit weight of Fc DNA, and root colonization doubled compared to the untreated control. Therefore, in contrast to its potential role as an aggressiveness factor in stem base infection, trichothecene production by Fc and Fg is detrimental to the early stages of wheat root colonization in FCR.     

Morphological and molecular characterization of Phytophthora species associated with root and crown rot of pomegranate in Iran

The purpose of this research was to identify the pathogens causing root and crown rot in major pomegranate-growing areas of Iran. Infected tissue samples were collected from trees with symptoms from 49 pomegranate orchards in four provinces of Iran: Fars, Markazi, Isfahan, and Kohgiluyeh va Boyer-Ahmad. In total, 23 Phytophthora spp. isolates were obtained, which were identified as P. cryptogea species complex (12 isolates) and P. cinnamomi (11 isolates) based on morphological characters. Molecular confirmation of identification was performed by inference of phylogeny of ITS-rDNA regions, β-tubulin gene, and the mitochondrial gene cytochrome c oxidase subunit 1. The results of our phylogenetic analysis confirmed the morphological identification of P. cinnamomi isolates and placed them in Clade 7c of Phytophthora. In addition, the P. cryptogea species complex isolates, despite morphological similarities, were in fact four distinct species including P. cryptogea sensu stricto (two isolates), P. pseudocryptogea (one isolate), P. sp. kelmania (one isolate), and P. erythroseptica (six isolates). This is the first report of pomegranate root and crown rot caused by P. cinnamomi and P. cryptogea species complex.     

Phytophthora root and crown rot of raspberry in Bulgaria

Root and crown rot of raspberry (Rubus idaeus L.) was observed in a plantation at the experimental station of small fruits in Kostinbrod, Bulgaria. Isolates ofPhytophthora spp. were obtained from diseased plants. Colony morphology, growth rates, features of asexual and sexual structures were studied and as a result twoPhytophthora species were identified:Phytophthora citricola Saw. andPhytophora citrophthora (R.E. Sm. & E.H. Sm.) Leonian. Their pathogenicity was confirmed in artificial inoculation experiments. The isozyme (-esterase) patterns ofP. citrophthora andP. citricola isolates from raspberry and from the collection of the CBS, Baarn the Netherlands were compared, using micro-gel electrophoresis. Both species are reported for the first time as pathogens of raspberry in Bulgaria. This is only the second report in phytopathological literature ofP. citrophthora on raspberry, the first being from Chile [Latorre and Munoz, 1993].     

Phytophthora chlamydospora and P. megasperma associated with root and crown rot of sour cherry in Turkey

Journal of Plant Diseases and Protection - Sour cherry is a very important commercial crop of Turkey. In a newly established orchard in Ankara province of Turkey, some of young sour cherry trees...     

Fusarium crown and root rot of tomatoes in the UK

Fusarium crown and root rot caused by Fusarium oxysporum f. sp. radicis-lycopersici was found in the UK in 1988 and 1989 mainly in rockwool-grown tomato crops. Up to 14% of plants were affected in individual crops. In experiments, leaf and stem symptoms did not appear until the time of first fruit harvest even when the plants were inoculated at planting, first flowers or fruit set. Conidial inoculum at 10⁶ spores/plant applied at seed sowing killed 70–83% of tomato seedlings, whereas similar levels of inoculum applied to young plants caused root and basal stem decay, and eventually death but only after fruit harvest began. Disease incidence and symptom severity increased with inoculum concentration. Experimentally, the disease was more severe in peat- or compost-grown plants than in rockwool. Disease spread was only a few centimetres in 50 days in experimental rockwool-grown plants. All tomato cultivars tested were highly susceptible. Prochloraz-Mn was highly effective against the pathogen in vitro and controlled the disease in the glasshouse, but only when applied preventively. Non-pathogenic Fusarium oxysporum isolates and Trichoderma harzianum also reduced FCRR disease levels.     

警惕小麦冠腐病发生及时做好病害防控

由假禾谷镰刀菌(Fusarium pseudograminearum O'DonnellT.Aoki)引起的小麦冠腐病(wheat crown rot)是我国小麦生产上新发生的病害,发展迅速,为害严重。为此,对其症状、国内外发生现状、病原学研究、病害发生成因、风险评估及防控措施等进行了综述,并为今后对小麦冠腐病的深入研究进行了展望。     

苯醚甲环唑等杀菌剂包衣种子防治花生冠腐病和根腐病

为筛选能兼治花生冠腐病和根腐病、安全而高效的种子处理药剂,采用室内生测法比较了4种杀菌剂对花生冠腐病菌和根腐病菌的毒力,评价了其包衣种子对花生的安全性,并进行了温室接菌盆栽和田间防治试验。结果显示,苯醚甲环唑、氟啶胺、咯菌腈和氟菌唑对花生冠腐病菌的毒力差异较大,EC_(50)分别为0.05、6.56、0.52和1.43 mg/L;对花生根腐病菌的毒力均较高,EC_(50)分别为0.49、0.31、0.44和0.37 mg/L。氟菌唑2 g(a.i.)/kg种子包衣后,花生出苗率和幼苗的根长、株高和茎叶鲜重均降低,出苗时间延迟1~2 d;而氟菌唑0.5、1 g(a.i.)/kg种子包衣及苯醚甲环唑、氟啶胺、咯菌腈3种杀菌剂的所有剂量处理对花生出苗和幼苗生长均无影响。苯醚甲环唑0.5、1、2 g(a.i.)/kg种子,氟啶胺0.4、0.8、1.6 g(a.i.)/kg种子,咯菌腈0.1、0.2、0.4 g(a.i.)/kg种子和氟菌唑0.5、1 g(a.i.)/kg种子包衣对花生冠腐病、根腐病的温室接菌盆栽防效均在80.19%以上。苯醚甲环唑1、2 g(a.i.)/kg种子和咯菌腈0.4 g(a.i.)/kg种子包衣对花生冠腐病、根腐病的田间防效较高,均在75.30%以上,且对荚果的增产率为5.60%~11.10%。表明苯醚甲环唑和咯菌腈包衣种子对花生安全,且可有效防治花生冠腐病和根腐病,具有开发为兼治药剂的潜力。     

The occurrence of Fusarium crown and root rot of tomato in Israel

Based upon symptomatology and the results of pathogenicity tests, it has been shown that the Fusarium crown and root rot organism of tomato — previously reported only from North America and Japan — is present in Israel.     

Identification and community dynamics of fungi associated with root,crown, and foot rot of field pea in western Canada

Fungal and oomycete communities in symptomatic roots, crowns and lower stem tissues of field pea plants from sites across the Canadian prairies were characterized using plate culture and sequence-based identification. Symptomatic plants were sampled at the mid-flowering stage from a total of 21 fields in 2014 and 2015. Fungi and oomycete species were isolated on agar medium and grouped into operational taxonomic groups (OTU) based on their morphology. From the OTUs, 40 fungal and oomycete species were identified according to translation elongation factor-1 alpha or ITS sequences. Fusarium spp. accounted for more than 60 % of total isolations. The fungal communities were similar in roots and crowns, but differed from communities in lower stems. In 2014, the most prevalent fungi isolated from roots were F. avenaceum, F. solani and F. redolens, but F. solani was dominant in 2015. In crown tissues, F. avenaceum was most prevalent in 2014 but F. solani was more prevalent in 2015. Stem tissues were primarily colonized by Peyronellaea spp. (= Ascochyta / Phoma spp.) and Alternaria spp. in 2014, but there was a drastic decrease in Peyronellaea spp. in 2015. This study indicated that climate, primarily precipitation levels, and local edaphic characteristics may play a profound role in the structure of phytopathogen communities associated with the root and foot rot diseases complex of field pea on the Canadian prairies.     

Development of crown and root rot disease of tomato under irrigation with saline water

ABSTRACT We studied the effect of water salinity on the incidence and severity of crown and root rot disease of tomato, as well as on the pathogen and on the plant's response to the pathogen. Irrigation with saline water significantly increased disease severity in tomato transplants inoculated with Fusarium oxysporum f. sp. radicis-lycopersici, and mineral fertilization further increased it. In one field experiment, disease incidence in plots irrigated with saline water (electrical conductivity [EC] = 3.2 +/- 0.1 dS m(-1)) and in those irrigated with fresh water (EC = 0.4 +/- 0.1 dS m(-1)) was 75 and 38%, respectively. Disease onset was earlier and yield was lower in plots irrigated with saline water. In a second field experiment, final disease incidence 250 days after planting, was 12% in plants which had been irrigated with saline water (EC = 4.6 +/- 0.1 dS m(-1)) and 4% in those irrigated with fresh water (EC = 1.2 +/- 0.1 dS m(-1)). Irrigation of tomato transplants with 20 mM NaCl did not inhibit plant development, but partial inhibition was observed at higher NaCl concentrations. Growth of the pathogen in culture or survival of conidia added to soil were not affected by saline water. Plants which were preirrigated with saline water were more severely diseased than those preirrigated with tap water. It was concluded that disease increases effected by saline water are associated with the latter's effect on plant response.