Genetic diversity and origin of North American green foxtail [<Emphasis Type="Italic">Setaria viridis</Emphasis> (L.) Beauv.] accessions

Setaria viridis (L.) P. Beauv. and its domesticated form, S. italica (L.) P. Beauv., have been developed over the past few years as model systems for C₄ photosynthesis and for the analysis of bioenergy traits. S. viridis is native to Eurasia, but is now a ubiquitous weed. An analysis of the population structure of a set of 232 S. viridis lines, mostly from North America but also comprising some accessions from around the world, using 11 SSR markers, showed that S. viridis populations in the US largely separate by latitude and/or climatic zone. S. viridis populations from the Northern US and Canada (north of 44°N) group with accessions from Western Europe, while populations in the Mid and Southern US predominantly group with accessions from Turkey and Iran. We hypothesize that S. viridis in the US was most likely introduced from Europe, and that introductions were competitive only in regions that had climatic conditions that were similar to those in the regions of origins. This hypothesis is supported by the fact that Canadian S. viridis lines were fast cycling and undersized when grown in the Mid-Western and Southern US compared to their morphology in their native environment. A comparison of the population structure obtained with 11 SSR markers and ~40,000 single nucleotide polymorphisms (SNPs) in a common set of S. viridis germplasm showed that both methods essentially yielded the same groupings, although admixture was identified at a higher frequency in the SNP analysis. Small numbers of SSR markers can thus be used effectively to discern the population structure in this inbreeding species.     

Identification and genetic structure of wild Italian <Emphasis Type="Italic">Humulus lupulus</Emphasis> L. and comparison with European and American hop cultivars using nuclear microsatellite markers

Nine genic SSR loci were used to evaluate the genetic diversity and identify accessions in wild Italian Humulus lupulus L., in comparison with widely cultivated European and U.S. commercial cultivars. A collection of 80 wild hop samples from Italy and 43 hop cultivars from Europe and U.S., were characterized. Allelic frequency analysis revealed 65 distinct Italian genotypes and differentiated all the commercial cultivars; moreover, specific alleles were observed for wild and cultivated hops. The number of alleles identified in the wild population were 104 and 123 within all the accessions. The maximum polymorphic information content was evidenced for locus HlGA23 in the Italian wild population and in the whole set of accessions (0.905 and 0.902 respectively). The dendrogram constructed from Euclidean distance with the UPGMA method showed two main clusters, one including commercial American and European accessions and one mostly composed by wild Italian accessions. Model-based clustering (Bayesian method) placed the accessions into five germplasm groups, one of which was characterized by Italian genotypes only. The study showed for the first time the great biodiversity present in Italy, and the remarkable differences with European and American hops. It was also found that within the population of north-central Italy a large genetic variability is present, suited to be studied and exploited; this genetic wealth could be used in future breeding programs in order to develop new hop varieties carrying characteristics useful for brewers.     

Evaluation of wild tomato accessions (<Emphasis Type="Italic">Solanum</Emphasis> spp.) for resistance to two-spotted spider mite (<Emphasis Type="Italic">Tetranychus urticae</Emphasis> Koch) based on trichome type and acylsugar content

Tomato wild relatives are important sources of resistance to many pests of cultivated tomato [Solanum lycopersicum L. (syn. Lycopersicon esculentum Mill.)]. Eleven wild tomato accessions previously identified at AVRDC—The World Vegetable Center as resistant to Bemisia tabaci were evaluated for resistance to the two-spotted spider mite [Tetranychus urticae (Koch.)] based on egg numbers using the leaf disc and Tanglefoot no-choice bioassays, and damage scores in choice bioassays. Highest resistance based on choice and no-choice bioassays was identified in AVRDC S. galapagense accessions VI057400, VI045262, VI037869 and VI037239, and S. cheesmaniae accession VI037240, all of which are new sources of T. urticae resistance. In addition, S. pimpinellifolium accession VI030462 exhibited resistance only in the no-choice bioassay based on egg numbers. Resistance to T. urticae based on the number of eggs from the no-choice bioassays was positively correlated with density of type IV glandular trichomes and negatively correlated with densities of type V trichomes. All resistant accessions accumulated high levels of total acylsugars, which were positively associated with type IV trichomes. There was a significant negative relationship between acylsugar content and T. urticae egg numbers from the no-choice bioassays. There was high correlation between the results from the leaf disc test and the Tanglefoot no-choice bioassay. These findings support the possible presence of broad-based insect and mite resistance in accessions closely related to cultivated tomato.     

Genetic resources for arcelin,a stored product insect antimetabolic protein from various accessions of pulses of Leguminosae

Pulses, the most important source of high-quality dietary proteins are prone to serious damage due to insect pests, of which 20–25% damage was inflicted by stored product bruchid pest, Callosobruchus maculatus (F.). An alternative approach to control these insect pests apart from fumigation is the use of primary metabolites involved in plant defense mechanism. In the present study, one of such molecule, an insect anti-metabolic protein, arcelin was screened from nine different wild and cultivated varieties of pulses. Insect feeding bioassay with C. maculatus revealed that seven of these seed varieties were not infested by the bruchid insect pest. Additionally, the presence of arcelin polypeptide subunits (27–42 kDa) was demonstrated in the seeds of Phaseolus limensis L. and Phaseolus lunatus L. whereas, an insignificant amount was observed in Lablab purpureus L. Besides, seed kernel extract of P. lunatus registered a highest HA activity against native human-A erythrocytes and this activity was increased to several fold when the erythrocytes were treated with proteolytic enzymes revealing the characteristic feature of arcelin. Similarly, HA activity was observed when rat and mouse erythrocyte was treated with pronase, whereas, no titer value was observed upon treatment with its native erythrocytes. Of the 24 carbohydrates tested, only acetylated amino sugar, N-acetyl-d-galactosamine inhibited the agglutinating activity of crude seed extract against human-A RBC. Among the three glycoproteins tested, none were found potential to competitively inhibit the agglutination activity against human-A erythrocytes. Overall, this study reveals the presence of arcelin, an anti-metabolic insecticidal protein in seeds of P. lunatus.     

Diversity analysis and evaluation of wild <Emphasis Type="Italic">Abelmoschus</Emphasis> species for agro-morphological traits and major biotic stresses under the north western agro-climatic condition of India

The wild species in general is considered to be the reservoir of genes especially for biotic and abiotic stresses. In okra, the predominant biotic stresses are yellow vein mosaic disease (YVMD), shoot and fruit borer and leaf hopper. Sixty eight (68) accessions belonging to four wild Abelmoschus species [Abelmoschus caillei (A. Chev.) Stevels, Abelmoschus manihot (L.) Medik., Abelmoschus moschatus (L.) Medik. and Abelmoschus tuberculatus Pal et Singh] and eight okra varieties were characterized and evaluated for phenological characters including biotic stresses under natural epiphytotic condition. The wild species examined consisted of 18 accessions (16 exotic and 2 indigenous) of A. caillei, 29 accessions of A. manihot, 16 accessions of A. moschatus and 5 accessions of A. tuberculatus. All the wild Abelmoschus species exhibited high diversity (as measured by Shannon Diversity Index) for 3 qualitative characters viz. intensity of stem colour, leaf shape, epicalyx shape, 13 quantitative characters and 3 biotic stress parameters. Among the wild species, A. caillei and A. tuberculatus showed maximum and minimum diversity for qualitative characters, respectively. There was significant variation for 19 out of 24 quantitative characters studied. Inter-species diversity pattern as estimated through Ward’s Minimum Variance Dendrogram and Principal Component Analysis revealed clear differentiation among the species with minimum overlapping indicating close association between geographical origins and clustering pattern. Intra-species diversity indicated role of specific adaptation in sub-clustering. Resistance to YVMD was found in accessions belonging to three wild species viz. A. caillei, A. manihot and A. moschatus while resistance to shoot and fruit borer and leaf hopper was found in accessions of all the four wild species. The resistant accessions can further be used for introgressing biotic stress resistance through pre-breeding into cultivated okra species.     

Adult plant resistance to <Emphasis Type="Italic">Puccinia triticina</Emphasis> in a geographically diverse collection of <Emphasis Type="Italic">Aegilops tauschii</Emphasis>

Despite extensive genetics and breeding research, effective control of leaf rust caused by Puccinia triticina Eriks. and an important foliar disease of wheat, has not been achieved. This is mainly due to the widespread use of race-specific seedling resistance genes, which are rapidly overcome by new virulent races. There is increased emphasis now on the use of race-nonspecific adult plant resistance (APR) genes for durable control of leaf rust. The objective of this study was the evaluation of Aegilops tauschii Coss. (the D-genome donor of bread wheat) for APR, previously known to be a rich source of seedling resistance genes to leaf rust. A geographically diverse collection of A. tauschii maintained by the Wheat Genetics Resource Center was evaluated for APR in the field with a leaf rust composite culture of predominant races. Out of a total of 371 A. tauschii accessions, 50 with low to moderate levels of disease severity were subsequently tested at the seedling stage in the greenhouse with four races and one composite culture of leaf rust. Nine accessions displayed moderate resistance to one or more races of leaf rust at the seedling stage. The remaining 41 seedling-susceptible accessions are potential sources of new APR genes. Accessions from Afghanistan only displayed APR whereas both seedling resistance and APR were common in the Caspian Sea region (Iran and Azerbaijan). The APR in these newly identified A. tauschii accessions will be further characterized for novelty, effectiveness, and race-specificity.     

Morphological and genetic analysis of a cleistogamous mutant in rapeseed (<Emphasis Type="Italic">Brassica napus</Emphasis> L.)

Cleistogamy, the trait of non-opening flowers, is considered to be beneficial as it reduces the threat of genetic contamination and gene flow from genetically modified varieties into other crops or native species. A cleistogamous mutant Zhong9-Clg obtained in the rapeseed cultivar Zhongshuang 9 population (Brassica napus L.) treated by ethylmethanesulfonate were investigated. Mutation had pronounced effect on petal and sepal epidermal cells resulting in the inhibition or delay of petal development, forming folded petals which ultimately resulted in cleistogamous flowers. Genetic investigation revealed that this trait was monogenic and the allele for cleistogamy was dominant. Most of the eight agronomic traits tested, including seed yield per plant, were not significantly different between the mutant and wild type plants. Fertility of the cleistogamous mutant Zhong9-Clg was not significantly affected by mutation. Our research findings will lay the foundation for the development of the cleistogamous varieties that could be used in controlling the gene flow in rapeseed in combination with other means of containment strategies.     

Genetic structure and differentiation among oregano [<Emphasis Type="Italic">Origanum vulgare</Emphasis> subsp. <Emphasis Type="Italic">glandulosum</Emphasis> (Desf.) Ietswaart] provenances from North Africa: bioinformatic approaches cause systematic bias

Thirteen simple sequence repeat (SSR) markers developed from expressed sequence tags (ESTs) of essential oil glands of Origanum vulgare were previously evaluated. These EST-SSR loci were analyzed to study the genetic diversity and differentiation of Origanum vulgare subsp. glandulosum, an endemic species of Tunisia. The study was performed on five natural populations from the Maghreb regions (North Africa) from northern Tunisia (Sejnane, Krib, Bargou, Zaghouan and Nefza). Two other subspecies of O. vulgare were used as out-group. These are O. vulgare subsp. hirtum (from USA) and O. vulgare subsp. vulgare (from Italy). A total of 60 alleles were detected in the seven populations studied. The number of alleles per locus ranged from 2 to 9. This analysis revealed that the unbiased expected heterozygosity (0.327) is higher than the observed heterozygosity (0.242), reflecting a deficit in heterozygosity in the total population. Only the Sejnane population has an excess of heterozygosity. The differentiation between Tunisian populations is highly significant and indicates the presence of a structure between these populations. However, the indexes of genetic differentiation (FST) values are low and vary between 0.048 and 0.115 which indicate the presence of a weak structure. The value of the FST between Nefza and Krib is not significant, reflecting the absence of genetic structure between them. The value of gene flow between these two populations is the most important (27.34), showing a substantial exchange of genes or genomic regions between them. The migration of genes is less important among the other Tunisian populations. Genetic structuring according to the geographical origin of Tunisian populations is low but still exists, which allows concluding the presence of a single complex gene pool.     

Genetic factors determining varietal differences in characters affecting yield between two rice (Oryza sativa L.) varieties,Koshihikari and IR64

The yield of Koshihikari, a Japanese premium rice variety, is relatively lower than that of modern high yielding varieties. IR64 carries several well-known genes such as GS3, an important gene for grain size, sd-1, a semi-dwarf gene, and NARROW LEAF1 (NAL1), a gene for small, narrow flag leaves. In this study, we used two sets of chromosome segment substitution lines (CSSLs), from Koshihikari and IR64, and attempted to evaluate the genetic factors that cause differences between parents by analyzing the function of chromosome regions affecting a trait (CRATs). For 28 traits, we identified 312 CRATs in the Koshihikari background and 275 in the IR64 background. In these, donor alleles had positive effects in 84 and 103 CRATs, respectively. Among these, the CRAT related to GS3 and those for grain number expanded the potential sink size in Koshihikari, although this did not affect final yield. The combination of CRATs that enhances source ability may increase grain yield. Although the sd-1 gene might improve resistance to lodging, the yield of CSSLs with sd-1 decreased by 28.7 %. These results suggest that the smaller biomass conferred by sd-1 might reduce canopy photosynthesis. In the Koshihikari background, the CRAT related to NAL1 and those located on chr. 6 increased SPAD value but had the opposite effect on leaf size. Two CRATs that were detected on chr. 6 and 7 increased leaf area without any effect on the SPAD value. The combination of these CRATs for area and SPAD value might improve source ability.     

Biodiversity in Ethiopian linseed (<Emphasis Type="Italic">Linum usitatissimum</Emphasis> L.): molecular characterization of landraces and some wild species

Molecular characterization of germplasm is important for sustainable exploitation of crops. DNA diversity was measured using inter-retrotransposon-amplified-polymorphism and inter-simple-sequence-repeat markers in 203 Ethiopian landraces and reference varieties of linseed (flax, Linum usitatissimum) and wild Linum species. Molecular diversity was high (PIC, 0.16; GD, 0.19) compared to other reports from the species. Genotyping separated reference from landrace accessions, and clustered landrace accessions from different altitudes and geographical regions. Collections showed evidence for recent introduction of varieties in some regions. The phylogeny supported L. bienne Mill. as the progenitor of domesticated L. usitatissimum. Markers developed here will be useful for genetic mapping and selection of breeding lines. The results show the range of characters that can be exploited in breeding lines appropriate for smallholder and commercial farmers in Ethiopia, producing a sustainable, secure, high-value crop meeting agricultural, economic and cultural needs.     

Diversity and differentiation of <Emphasis Type="Italic">Oryza sativa</Emphasis> and <Emphasis Type="Italic">O. rufipogon</Emphasis> in Indonesia

Analysis of the genetic structure of Indonesian Oryza sativa and O. rufipogon using neighbour-joining trees based on single nucleotide polymorphism (SNP) and simple sequence repeat (SSR) markers revealed that O. sativa in Indonesia is separated from O. rufipogon. Accessions of O. sativa in this study were differentiated into two major groups, indica and tropical japonica, excluding some varieties. SSR and SNP markers revealed the high value of differentiation (F _ST) and genetic distance (D) between indica and tropical japonica and we discovered four loci by SNP markers and one locus by SSR markers that play a role in differentiation between indica and tropical japonica. Interestingly, genetic diversity (H) in O. rufipogon was lower than that in O. sativa, however H in O. rufipogon was the highest and H in tropical japonica was the lowest when O. sativa was divided into two groups. Inbreeding coefficient (Fst) showed evidences that gene flow (Nm) between species and within species might be one of the mechanisms related to the diversification and differentiation of Indonesian rice germplasm by asymmetric pattern between species and within O. sativa as revealed by SSR and SNP markers. In addition, we found evidences on stabilizing selection in Indonesian rice germplasm and they might be the reasons why Indonesian rice germplasm did not differentiate due to source location of landrace. However, we found a weak relation between SSR and SNP markers probably due to highly polymorphic in SSR and the different properties of both markers.     

Phytostabilization Ability of <Emphasis Type="Italic">Baccharis linearis</Emphasis> and Its Relation to Properties of a Tailings-Derived Technosol

Spontaneous colonization of mine tailing dams by plants is a potential tool for phytostabilization of such reservoirs. However, the physical and chemical properties of each mine tailings deposit determine the success of natural plant establishment. The plant Baccharis linearis is the main native nanophanerophyte species (evergreen sclerophyllous shrub) that naturally colonizes abandoned copper tailings dams in arid to semiarid north-central Chile. This study compare growth of B. linearis against the physical and chemical properties of a Technosol derived from copper mine tailings. Five sites inside the deposit were selected based on B. linearis vegetation density (VD), at two soil sampling depths under the canopy of adult individuals. Physical and chemical properties of tailings samples and nutrient concentrations in tailings and plants were each determined. Some morphological features of the plants (roots and aerial parts) were also quantified. There were significant differences in soil available water capacity (AW) and relative density (Rd) at different VD. Sites with low AW and high Rd had lower nutrient concentrations and higher Zn content in tailings, decreased infection by arbuscular mycorrhizal fungi, and increased fine root abundance and root hair length in individual plants. In contrast, higher AW, which was positively correlated with fine particles and organic matter content, had a positive effect on vegetation coverage, increased N and P contents in tailings, and increased N contents in leaf tissues, even when available N and P levels in tailings were low. Multiple constraints, such as low AW, N, P, and B contents and high Zn concentrations in the tailings restricted vegetation coverage, but no phenotypic differences were observed between individuals. Thus, in order to promote dense coverage by B. linearis, water retention in these tailings must be improved by increasing colloidal particles (organic and/or inorganic) contents, which have a positive effect on colonization by this species.     

Screening species of <Emphasis Type="Italic">Pilocarpus</Emphasis> (Rutaceae) as sources of pilocarpine and other imidazole alkaloids

Plants of the Pilocarpus genus (Rutaceae) are popularly known as jaborandi and are the only source of pilocarpine, an imidazole alkaloid used in eye-drops for the treatment of glaucoma as well as for the stimulation of sweat and lachrymal glands. Alkaloid extracts from leaf samples of seven species of Pilocarpus, from the states of São Paulo and Maranhão in Brazil, were analyzed using HPLC–ESI–MS/MS. The samples contained between 0.88 ± 0.04 and 1.00 ± 0.14% of alkaloids in relation to the dry weight of their leaves, with significant differences in results (P ≤ 0.05) found only between Pilocarpus microphyllus planted in the state of Maranhão and Pilocarpus spicatus, Pilocarpus trachyllophus, Pilocarpus pennatifolius and Pilocarpus jaborandi; as well as between Pilocarpus spicatus and Pilocarpus racemosus. Pilocarpine was not found in P. spicatus, whereas in the other species it ranged from 2.6 ± 0.1 to 70.8 ± 1.2% of total alkaloids. P. microphyllus planted in the state of Maranhão for pilocarpine extraction had the highest total alkaloid content, but it had only 35% of pilocarpine in relation to total alkaloids. Three other species contained more pilocarpine in relation to total alkaloids: P. jaborandi (70.8%), P. racemosus (45.6%) and P. trachyllophus (38.7%); and could be candidates for pilocarpine extraction. Differences in alkaloid content were significant for all these samples (P ≤ 0.05). Imidazole alkaloids were observed and partially characterized based on their retention times and high resolution mass. The seven species analyzed had different imidazole alkaloid profiles, but only one did not present quantifiable pilocarpine contents in its leaves. The Pilocarpus genus shows potential for the prospection of novel alkaloids.     

How weed control and fertilisation influence tree physiological processes and growth at early establishment in an exotic F<Subscript>1</Subscript> hybrid pine plantation of subtropical Australia

Purpose

This study investigated how nitrogen (N) nutrition and key physiological processes varied under changed water and nitrogen competition resulting from different weed control and fertilisation treatments in a 2-year-old F₁ hybrid (Pinus elliottii Engelm var. elliottii?×?P. caribaea var. hondurensis Barr. ex Golf.) plantation on a grey podzolic soil type, in Southeast Queensland.

Materials and methods

The study integrated a range of measures including growth variables (diameter at ground level (DGL), diameter at breast height (DBH) and height (H)), foliar variables (including foliar N concentration, foliar δ¹³C and δ¹⁵N) and physiological variables (including photosynthesis (A_n), stomatal conductance (g_s), transpiration (E), intrinsic water use efficiency (WUE_i) (A/g_s) and xylem pressure potential (Ψ_XPP)) to better understand the mechanisms influencing growth under different weed control and fertilisation treatments. Five levels of weed control were applied: standard (routine), luxury, intermediate, mechanical and nil weed control, all with routine fertilisation plus an additional treatment, routine weed control and luxury fertilisation. Relative weed cover was assessed at 0.8, 1.1 and 1.6 years after plantation establishment to monitor the effectiveness of weed control treatments. Soil investigation included soil ammonium (NH₄ ⁺-N), nitrate (NO₃ ^?-N), potentially mineralizable N (PMN), gravimetric soil moisture content (MC), hot water extractable organic carbon (HWETC), hot water extractable total N (HWETN), total C, total N, stable C isotope composition (δ¹³C), stable N isotope composition (δ¹⁵N), total P and extractable K.

Results and discussion

There were significant relationships between foliar N concentrations and relative weed cover and between tree growth and foliar N concentration or foliar δ¹⁵N, but initial site preparation practices also increased soil N transformations in the planting rows reducing the observable effects of weed control on foliar δ¹⁵N. A positive relationship between foliar N concentration and foliar δ¹³C or photosynthesis indicated that increased N availability to trees positively influenced non-stomatal limitations to photosynthesis. However, trees with increased foliar N concentrations and photosynthesis were negatively related to xylem pressure potential in the afternoons which enhanced stomatal limitations to photosynthesis and WUE_i.

Conclusions

Luxury and intermediate weed control and luxury fertilisation positively influenced growth at early establishment by reducing the competition for water and N resources. This influenced fundamental key physiological processes such as the relationships between foliar N concentration, A _n, E, g_s and Ψ_XPP. Results also confirmed that time from cultivation is an important factor influencing the effectiveness of using foliar δ¹⁵N as an indicator of soil N transformations.

     

Oil concentration and fatty-acid profile of naturalized <Emphasis Type="Italic">Helianthus annuus</Emphasis> populations from Australia

Although wild annual sunflower (Helianthus annuus L.) is indigenous to North America, it has been both inadvertently and intentionally introduced into other countries, such as Australia, where it has become naturalized. Prior to this research, there were no collections of naturalized H. annuus from Australia in the USDA National Plant Germplasm System gene bank. The possibility exists that naturalized Australian populations may contain distinct traits, such as oil content and fatty-acid composition, differing from their North American progenitors due to the different environments, diseases, and insect-pest complexes. The objective of this study was to collect naturalized H. annuus populations from the five states of Australia and to analyze them for oil content and fatty-acid composition. Fifty-six populations were collected throughout the broad distributional range of this species and then analyzed for oil content and fatty-acid composition. The mean oil content of the H. annuus populations was 28%, ranging from a low of 19% to a high of 31%, similar to populations of this species in its native North American habitats. Fatty-acid profiles were also similar for North American wild populations, Australian naturalized populations, and improved cultivars. Oil concentration of hybrids can be rapidly increased to acceptable levels by backcrossing with cultivated sunflower. Based on this fact, there should be little concern about the relatively low oil content of these naturalized populations when they are used as a source of other unique traits for cultivated sunflower improvement.     

Molecular characterization of <Emphasis Type="Italic">Triticum militinae</Emphasis> derived introgression lines carrying leaf rust resistance

Triticum militinae Zhuk. et Migusch. belongs to timopheevii [Triticum timopheevii (Zhuk.) Zhuk.] group of wheats with 2n = 4x = 28 chromosomes and genome formula A^tA^tGG. Triticum militinae Zhuk. et Migusch. is known to carry resistance to fungal diseases including rusts and powdery mildew. Genes from timopheevii wheat can be incorporated into cultivated wheat by either direct hybridization or through development of amphiploids. Three T. militinae derived introgression lines (ILs) Triticum Militinae Derivative (TMD) 6-4, TMD7-5 and TMD11-5 were selected for the current study based on cytological stability. All three ILs showed resistance against wide spectrum of Indian pathotypes of leaf rust. More than 1200 SSR markers were used for genotyping of ILs and parental lines. The ILs showed variable and multiple introgressions in different chromosomes of A, B and D genome of wheat. The introgression points were distributed mostly in the distal regions though significant introgressions were also observed in proximal regions of some chromosomes. The extent of introgression in ILs TMD6-4, TMD7-5 and TMD11-5 was 2.8, 8.3 and 8.6% respectively. The set of ‘informative markers’ in the Molecularly Tagged Chromosome Regions (MTCR) of T. militinae origin can also be used in future for tagging of genes associated with traits of economic importance apart from leaf rust resistance. The transferability of Triticum aestivum L. SSR markers to T. militinae was 96.4% for A genome, 95.8% for B genome and 84.3% for D genome. Transferability of wheat SSR markers to T. militinae can be used in preparing genetic maps in timopheevii group of wheats.     

Changes in CH<Subscript>4</Subscript> production during different stages of litter decomposition under inundation and N addition

Purpose

Our aim was to examine linkages between mass loss, chemical transformation and CH₄ production during decomposition of leaf litters submerged under water. We hypothesised that (i) labile leaf litters would fuel a rapid, high rate of methane (CH₄) production and that recalcitrant litters would fuel long-lasting but lower emissions, (ii) leaf litters experiencing a greater alteration to chemical properties would stimulate increased CH₄ production and (iii) nitrogen (N) addition would increase CH₄ emissions.

Materials and methods

Litters from six plant species were collected from a riparian ecosystem adjacent to Wyaralong Dam, located in Queensland, Australia, i.e., Lophostemon confertus, Cynodon dactylon, Heteropogon contortus, Chamaecrista rotundifolia, Chrysocephalum apiculatum and Imperata cylindrica. We evaluated the rate of mass loss and CH₄ emissions for 122 days of incubation in inundated microcosms with and without N addition. We quantified the chemical changes in the decomposing litters with ¹³ C-cross polarization and magic angle spinning (CPMAS) nuclear magnetic resonance (NMR) spectrum.

Results and discussion

The inundation treatment of plant litters significantly affected decomposition rates. All litters decomposed in either inundated or aerobic microcosms were quite distinct with regard to the NMR spectra of their initial litters. N addition altered the NMR spectra under both inundation and aerobic conditions. The N treatment only marginally influenced the decomposition rates of I. cylindrica and C. apiculatum litters. The diurnal patterns of CH₄ production in the H. contortus, C. rotundifolia and C. apiculatum litters under inundation incubation could be expressed as one-humped curves, with the peak value dependent on litter species and N treatment. N addition stimulated CH₄ emission by C. rotundifolia and C. apiculatum litters and inhibited CH₄ emission from microcosms containing the litters of the three gramineous species, i.e., I. cylindrica, C. dactylon and H. contortus.

Conclusions

Our results provide evidence that labile leaf litters could fuel a rapid, high rate of CH₄ production and that recalcitrant litters fuelled a lower CH₄ emission. We did not find that leaf litters with altered chemical properties stimulated increased CH₄ production. We also found that N addition was able to increase CH₄ emissions, but this effect was dependent on the litter species.