Drivers of microbial respiration and net N mineralization at the continental scale

The dominant pools of C and N in the terrestrial biosphere are in soils, and understanding what factors control the rates at which these pools cycle is essential in understanding soil CO₂ production and N availability. Many previous studies have examined large scale patterns in decomposition of C and N in plant litter and organic soils, but few have done so in mineral soils, and fewer have looked beyond ecosystem specific, regional, or gradient-specific drivers. In this study, we examined the rates of microbial respiration and net N mineralization in 84 distinct mineral soils in static laboratory incubations. We examined patterns in C and N pool sizes, microbial biomass, and process rates by vegetation type (grassland, shrubland, coniferous forest, and deciduous/broadleaf forest). We also modeled microbial respiration and net N mineralization in relation to soil and site characteristics using structural equation modeling to identify potential process drivers across soils. While we did not explicitly investigate the influence of soil organic matter quality, microbial community composition, or clay mineralogy on microbial process rates in this study, our models allow us to put boundaries on the unique explanatory power these characteristics could potentially provide in predicting respiration and net N mineralization. Mean annual temperature and precipitation, soil C concentration, microbial biomass, and clay content predicted 78% of the variance in microbial respiration, with 61% explained by microbial biomass alone. For net N mineralization, only 33% of the variance was explained, with mean annual precipitation, soil C and N concentration, and clay content as the potential drivers. We suggest that the high R² for respiration suggests that soil organic matter quality, microbial community composition, and clay mineralogy explain at most 22% of the variance in respiration, while they could explain up to 67% of the variance in net N mineralization.     

The effect of a perennial cover crop on net soil N mineralization and microbial biomass carbon in coconut plantations in the humid tropics

The decrease in soil fertility in agroecosystems due to continuous harvesting, loss of fine soil and oxidation of soil organic carbon (SOC) is well known. This study evaluates for a humid tropical climate in South Andaman Island, India, the impact of a 15-yr old Pueraria cover crop (CC) under a coconut plantation, with and without phosphorus (P) application, on the soil N mineralization rate (NMR), the mineral N pool (NH₄⁺-N and NO₃⁻-N), microbial biomass carbon (MB-C) and SM under four treatments, (1) no cover crop (NCC), (2) no cover crop + phosphorus (NCC+P), (3) CC, and (4) cover crop + phosphorus (CC+P) during three seasons, wet (May–October), post-wet (November–January) and dry (February–April). The NCC treatment served as a control. In addition, an ex-situ experiment was conducted to verify the effect of P application on NMR and MB-C under 100% field capacity (FC), 50 and 25% FC representing the different seasons. The NMR, mineral N pool and MB-C increased by 37, 46 and 41%, respectively under the CC compared to the control. SOC and fine soil particles were also greater under the CC by 41 and 461%, respectively, compared to the control. The application of P to the CC increased soil N mineralization, the mineral N pool and MB-C by 33, 16 and 14%, respectively. The amount of mineralized N was greater under the CC and CC+P treatments by 39 and 73%, respectively than the control. The ex-situ experiment showed that the P application increased NMR and MB-C, but the increases were highest in the 50% FC and lowest in 100% FC. It is proposed for the humid tropics that a CC could be used for enhancing SOC and increasing soil N mineralization under coconut plantations and other similar agroecosystems.     

Effect of tebuthiuron on soil N mineralization and nitrification

Abstract

Herbicides have potential for economical and efficient site preparation following timber harvest. The effects of tebuthiu‐ron, one of the herbicides approved for this use, on soil nitrogen (N) mineralization and nitrification were determined in laboratory incubations. Tebuthiuron was added at rates from 0 to 1000 μg g^‐1 to three soils. There was no effect of tebuthiuron additions of less than 1 μg g^‐1 on soil N mineralization and nitrification. Tebuthiuron reduced nitrification in all soils at 1000 μg g^‐1 and in two of the soils at 100 μg g^‐1 . All soils had increased net mineralization with tebuthiuron added at 100 and 1000 μg g^‐1. The addition of 50 μg NH⁺ ₄‐N and 1000 μg tebuthiuron g^‐1 resulted in increased net mineralization in the three soils. Nitrification was affected differently in each of the three soils by the addition of both NH⁺ ₄‐N and tebuthiuron. The added NH⁺ ₄‐N either removed the inhibition of nitrification by the herbicide or had no effect on the inhibition in two of the soils. In the third soil, nitrification was reduced by the addition of NH⁺ ₄‐N.

The presence of NO^‐ ₃‐N in these acid soils and the effects of added NH⁺ ₄‐N on NO^‐ ₃‐N production suggest that heterotrophic nitrification occurs in at least two of the soils. The findings of this study indicate that any effects of tebuthiuron on N mineralization and nitrification at the currently recommended application rates are likely to be transient and localized.     

Effect of bamboo harvest on dynamics of nutrient pools,N mineralization,and microbial biomass in soil

The effect of harvesting bamboo savanna on the dynamics of soil nutrient pools, N mineralization, and microbial biomass was examined. In the unharvested bamboo site NO _inf3 ^sup- -N in soil ranged from 0.37 to 3.11 mg kg^-1 soil and in the harvested site from 0.43 to 3.67 mg kg^-1. NaHCO₃-extractable inorganic P ranged from 0.55 to 3.58 mg kg^-1 in the unharvested site and from 1.01 to 4.22 mg kg^-1 in the harvested site. Over two annual cycles, the N mineralization range in the unharvested and harvested sites was 0–19.28 and 0–24.0 mg kg^-1 soil month^-1, respectively. The microbial C, N, and P ranges were 278–587, 28–64, and 12–26 mg kg^-1 soil, respectively, with the harvested site exhibiting higher values. Bamboo harvesting depleted soil organic C by 13% and total N by 20%. Harvesting increased N mineralization, resulting in 10 kg ha^-1 additional mineral N in the first 1st year and 5 kg ha^-1 in the 2nd year following the harvest. Microbial biomass C, N and P increased respectively by 10, 18, and 5% as a result of bamboo harvesting.     

Microbial biomass and microbial C:N ratio in bulk soil and buried bags for evaluating in situ net N mineralization in agricultural soils

The in situ net nitrogen mineralization (N_net) was estimated in five agricultural soils under different durations of organic farming by incubating soil samples in buried bags. Simultaneously, soil microbial C and N was determined in buried bags and in bulk soil under winter wheat and after harvest. The aim was to check for variations in soil microbial biomass contents and microbial C:N ratios during the incubation period, and their importance for N_net rates. Microbial C and N contents were highest in soils that had been organically farmed for 41 years, whereas N_net rates were highest in a short‐term organically managed soil that had been under grassland use until 36 years ago. The mean coefficient of variation in the bulk soil for microbial C estimates ranged from 5 to 12 %. Microbial N contents were similar inside buried bags and in the bulk soil at the end of the incubation periods. Under winter wheat during the incubation period until harvest, microbial C contents and microbial C:N ratios (in 10—27 cm depth only) decreased more strongly inside buried bags than in the bulk soil. Following harvest of winter wheat and ploughing, microbial biomass increased while in situ N_net decreased, presumably due to N immobilization. The N_net rates were not correlated with microbial N contents or changes in microbial N contents inside buried bags. At the end of the vegetation period of winter wheat, N_net rates were negatively correlated with microbial C:N ratios. Because these ratios concurrently decreased more inside buried bags than in the bulk soil, the N_net estimates of the buried bag method may differ from the N_net rates in the bulk soil at that time.     

Influence of Cognettia sphagnetorum (Enchytraeidae) on birch growth and microbial activity, composition and biomass in soil with or without wood ash

In this laboratory study using microcosms with seedlings of silver birch (Betula pendula), we explored whether Cognettia sphagnetorum (Enchytraeidae) can retain its important role of accelerating decomposition processes in soils and stimulating primary production under disturbance. We established systems with or without wood ash amendment (first-order disturbance) in the soil, either in the presence or absence of C. sphagnetorum. To test whether the systems treated with wood ash are more sensitive to an additional disturbance than the ash-free systems, the microcosms were later on disturbed by drought. To determine the influence of two disturbances on the enchytraeids and populations of other fauna, and the possible changes in the system functioning, measurements were made of the growth of birch seedlings, foliar N concentration, composition and biomass of soil microbial communities and leaching of N and dissolved organic carbon from the microcosms. Both wood ash application and drought exerted a clear negative influence on the populations of C. sphagnetorum. However, populations of this species were very resilient and recovered rapidly after drought in the ash-free soils. In the ash-free soils C. sphagnetorum tended to improve birch growth, increased the N content of the birch leaves, and decreased the root to shoot ratio. However, in the ash-treated soils enchytraeids had negative effects on these parameters. C. sphagnetorum impacted on neither N and C leaching nor soil microbes, whereas wood ash decreased microbial biomasses and changed their community structure (as determined by phospholipid fatty acids method and denaturing gel electrophoresis) and substrate utilisation potential (Biolog method). It was concluded that C. sphagnetorum can retain its influential role under varying environmental conditions, but that the stimulating or retarding effects of this species on system functioning can be context dependent.     

Effect of N addition,moisture, and temperature on soil microbial respiration and microbial biomass in forest soil at different stages of litter decomposition

Purpose

The objective of the present study was to investigate the interactive effects of nitrogen (N) addition, temperature, and moisture on soil microbial respiration, microbial biomass, and metabolic quotient (qCO₂) at different decomposition stages of different tree leaf litters.

Materials and methods

A laboratory incubation experiment with and without litter addition was conducted for 80 days at two temperatures (15 and 25 °C), two wetting intensities (35 and 50 % water-filled porosity space (WFPS)) and two doses of N addition (0 and 4.5 g N m^?2, as NH₄NO₃). The tree leaf litters included three types of broadleaf litters, a needle litter, and a mixed litter of them. Soil microbial respiration, microbial biomass, and qCO₂ along with other soil properties were measured at two decomposition stages of tree leaf litters.

Results and discussion

The increase in soil cumulative carbon dioxide (CO₂) flux and microbial biomass during the incubation depended on types of tree leaf litters, N addition, and hydrothermal conditions. Soil microbial biomass carbon (C) and N and qCO₂ were significantly greater in all litter-amended than in non-amended soils. However, the difference in the qCO₂ became smaller during the late period of incubation, especially at 25 °C. The interactive effect of temperature with soil moisture and N addition was significant for affecting the cumulative litter-derived CO₂-C flux at the early and late stages of litter decomposition. Furthermore, the interactive effect of soil moisture and N addition was significant for affecting the cumulative CO₂ flux at the late stage of litter decomposition but not early in the experiment.

Conclusions

This present study indicated that the effects of addition of N and hydrothermal conditions on soil microbial respiration, qCO₂, and concentrations of labile C and N depended on types of tree leaf litters and the development of litter decomposition. The results highlight the importance of N availability and hydrothermal conditions in interactively regulating soil microbial respiration and microbial C utilization during litter decomposition under forest ecosystems.

     

Effect of paclobutrazol on microbial biomass,respiration and cellulose decomposition in soil

Paclobutrazol is a plant growth regulator largely utilized in mango cultivation and usually applied directly to soil. The aim of this study was to examine the effect of paclobutrazol on soil microbial biomass, soil respiration and cellulose decomposition in Brazilian soils under laboratory conditions. Soil samples were collected from fields with and without a reported history of paclobutrazol application. A solution of paclobutrazol (8 mg of active ingredient kg^?1 of soil) was added to soils, which were then incubated at 28 °C for 30 days. Paclobutrazol decreased soil microbial biomass, soil respiration and cellulose decomposition in soil with and without a report of paclobutrazol application, while significant increase was observed in the respiratory quotient (qCO₂). Our results show that the soil microbiological attributes were negatively affected by paclobutrazol in short-term experiment.     

添加黏土及植物残体混合物对沙质土壤中呼吸作用和微生物量碳、氮有效性的影响

Crop yields in sandy soils can be increased by addition of clay-rich soil, but little is known about the effect of clay addition on nutrient availability after addition of plant residues with different C/N ratios. A loamy sandy soil(7% clay) was amended with a clay-rich subsoil(73% clay) at low to high rates to achieve soil mixtures of 12%, 22%, and 30% clay, as compared to a control(sandy soil alone) with no clay addition. The sandy-clay soil mixtures were amended with finely ground plant residues at 10 g kg~(-1): mature wheat(Triticum aestivum L.) straw with a C/N ratio of 68, mature faba bean(Vicia faba L.) straw with a C/N ratio of 39, or their mixtures with different proportions(0%–100%, weight percentage) of each straw. Soil respiration was measured over days 0–45 and microbial biomass C(MBC), available N, and p H on days 0, 15, 30, and 45. Cumulative respiration was not clearly related to the C/N ratio of the residues or their mixtures, but C use efficiency(cumulative respiration per unit of MBC on day 15) was greater with faba bean than with wheat and the differences among the residue mixtures were smaller at the highest clay addition rate. The MBC concentration was lowest in sole wheat and higher in residue mixtures with 50% of wheat and faba bean in the mixture or more faba bean. Soil N availability and soil p H were lower for the soil mixtures of 22% and 30% clay compared to the sandy soil alone. It could be concluded that soil cumulative respiration and MBC concentration were mainly influenced by residue addition, whereas available N and p H were influenced by clay addition to the sandy soil studied.     

Salinity and sodicity effects on respiration and microbial biomass of soil

An understanding of the effects of salinity and sodicity on soil carbon (C) stocks and fluxes is critical in environmental management, as the areal extents of salinity and sodicity are predicted to increase. The effects of salinity and sodicity on the soil microbial biomass (SMB) and soil respiration were assessed over 12weeks under controlled conditions by subjecting disturbed soil samples from a vegetated soil profile to leaching with one of six salt solutions; a combination of low-salinity (0.5dSm⁻¹), mid-salinity (10dSm⁻¹), or high-salinity (30dSm⁻¹), with either low-sodicity (sodium adsorption ratio, SAR, 1), or high-sodicity (SAR 30) to give six treatments: control (low-salinity low-sodicity); low-salinity high-sodicity; mid-salinity low-sodicity; mid-salinity high-sodicity; high-salinity low-sodicity; and high-salinity high-sodicity. Soil respiration rate was highest (56–80mg CO₂-C kg⁻¹ soil) in the low-salinity treatments and lowest (1–5mg CO₂-C kg⁻¹ soil) in the mid-salinity treatments, while the SMB was highest in the high-salinity treatments (459–565mg kg⁻¹ soil) and lowest in the low-salinity treatments (158–172mg kg⁻¹ soil). This was attributed to increased substrate availability with high salt concentrations through either increased dispersion of soil aggregates or dissolution or hydrolysis of soil organic matter, which may offset some of the stresses placed on the microbial population from high salt concentrations. The apparent disparity in trends in respiration and the SMB may be due to an induced shift in the microbial population, from one dominated by more active microorganisms to one dominated by less active microorganisms.     

Concurrent measurements of net mineralization, nitrification, denitrification and leaching from field incubated soil cores

An improved method is described for incubating intact soil cores in the field, which permits concurrent measurement of net mineralization, nitrification, denitrification and leaching. Cores were enclosed in PVC tubes with minimal disturbance to the physical state or to the natural cycles of wetting/drying, soil temperature and aeration during an incubation lasting 4–5 days. An example of the application of the method is given in which soils with contrasting drainage characteristics were compared. Over a 64-day experimental period, 58% of the mineralized nitrogen (N) in a freely drained soil was nitrified and 36% of the nitrate-N (NO₃ ^–-N) was denitrified. In a poorly drained soil, 72% of the mineralized N was nitrified and 63% of the NO₃ ^–-N was denitrified. In both soil types, 18% of the remaining NO₃ ^–-N was leached. Rates of nitrification were significantly correlated with net mineralization (r ²=0.41 and 0.52) and also closely correlated with denitrification (r ²=0.67 and 0.68) in the freely and poorly drained soils, respectively. Independent measurements of these processes, using alternative techniques (for the same period), compared favourably with measurements obtained with the improved incubation method. Adoption of this method has a number of advantages with respect to field net N mineralization, and also allows interpretation of the impact this may have on other N transformation processes. Received: 18 June 1997     

Significance of microbial biomass for carbon and nitrogen mineralization in soil

C and N mineralization was quantified in an incubation experiment with two samples containing different amounts of microbial biomass. The samples from two layers (0–20, 20–30 cm) of an arable luvisol from loess were fertilized with nitrate, mixed with ¹⁴C-labelled straw and incubated for 52 days at different O₂ levels. Decreasing O₂ concentrations (21, 2, 1 and 0% O₂) in soil conducted a decrease in C and N mineralization. More C and N were mineralized in samples with a higher initial microbial biomass. The differences in microbial biomass were still present at the end of the experiment, but more proliferation was detected in samples with the lower initial microbial biomass, leading to equal ratios between microbial biomass-C and soil organic C in both soils.     

Effects of tree harvesting, forest floor removal, and compaction on soil microbial biomass, microbial respiration, and N availability in a boreal aspen forest in British Columbia

The effects of timber harvesting and the resultant soil disturbances (compaction and forest floor removal) on relative soil water content, microbial biomass C and N contents (C_mic and N_mic), microbial biomass C:N ratio (C_mic-to-N_mic), microbial respiration, metabolic quotient (qCO₂), and available N content in the forest floor and the uppermost mineral soil (0-3 cm) were assessed in a long-term soil productivity (LTSP) site and adjacent mature forest stands in northeastern British Columbia (Canada). A combination of principal component analysis and redundancy analysis was used to test the effects of stem-only harvest, whole tree harvest plus forest floor removal, and soil compaction on the studied variables. Those properties in the forest floor were not affected by timber harvesting or soil compaction. In the mineral soil, compaction increased soil total C and N contents, relative water content, and N_mic by 45%, 40%, 34% and 72%, respectively, and decreased C_mic-to-N_mic ratio by 29%. However, these parameters were not affected by stem only harvesting or whole tree harvesting plus forest floor removal, contrasting the reduction of white spruce and aspen growth following forest floor removal and soil compaction reported in an earlier study. Those results suggest that at the study site the short-term effects of timber harvesting, forest floor removal, and soil compaction are rather complex and that microbial populations might not be affected by the perturbations in the same way as trees, at least not in the short term.     

Effect of forest and soil type on microbial biomass carbon and respiration

The aim of study was to evaluate the variation of soil microbial biomass carbon (C_mic) and microbial respiration (M_R) in three types soil (Chromic Cambisols, Chromic Luvisols and Eutric Leptosols) of mixed beech forest (Beech- Hornbeam and Beech- Maple). Soil was randomly sampled from 0–10 cm layer (plant litter removed), 90 soil samples were taken. C_mic determined by the fumigation-extraction method and M_R by closed bottle method. Soil C_org, N_tot and pH were measured. There are significant differences between the soil types concerning the C_mic content and M_R. These parameters were highest in Chromic Cambisols following Chromic Luvisols, while the lowest were in Eutric Leptosols. A similar trend of C_org and N_tot was observed in studied soils. Two-way ANOVA indicated that soil type and forest type have significantly effect on the most soil characteristics. Chromic Cambisols shows a productive soil due to have the maximum C_mic, M_R, C_org and N_tot. In Cambisols under Beech- Maple forest the C_mic value and soil C/N ratio were higher compared to Beech-Hornbeam (19.5 and 4.1 mg C g^–1, and 16.3 and 3.3, respectively). This fact might be indicated that Maple litter had more easy decomposable organic compounds than Hornbeam. According to regression analysis, 89 and 68 percentage of C_mic variability could explain by soil C_org and N_tot respectively.     

Seasonal effects of liming,irrigation, and acid precipitation on microbial biomass N in a spruce (Picea abies L.) forest soil

Summary Seasonal effects of liming, irrigation, and acid precipitation on microbial biomass N and some physicochemical properties of different topsoil horizons in a spruce forest (Picea abies L.) were measured throughout one growing season. The highest biomass N was recorded in autumn and spring in the upper soil horizons, while the lowest values were obtained in summer and in deeper horizons. The clearest differences between the different soil treatments were apparent in autumn and in the upper horizons. Liming increased the microbial biomass N from 1.7% of the total N content to 6.8% (Olf₁ layer) and from 1% to 2% of the total N content in the Of₂ layer. The main inorganic-N fraction in the deeper horizons was NO _inf3 ^sup- . An increase in cation exchange capacity was observed down to the Oh layer, while soil pH was only slightly higher in the Olf₁ and Of₂ layers after liming. The effects of irrigation were less marked. The microbial biomass N increased from 1.7% of total N to 4.8% in the Olf₁ layer and from 1% to 2% of total N in the Of₂ layer. In the Olf₁ layer an increase in C mineralization was observed. Acid precipitation decreased the microbial biomass N in the upper horizons from 4.8% of total N to 1.8% in the Olf₁ layer and from 2% to 0.5% in the Of₂ layer. No significant changes in soil pH were observed, but the decrease in cation exchange capacity may result in a decrease in the proton buffering capacity in the near future.     

Relationships of soil respiration to microbial biomass, substrate availability and clay content

The roles of microbial biomass (MBC) and substrate supply as well as their interaction with clay content in determining soil respiration rate were studied using a range of soils with contrasting properties. Total organic C (TOC), water-soluble organic carbon, 0.5 M K₂SO₄-extractable organic C and 33.3 mM KMnO₄-oxidisable organic carbon were determined as C availability indices. For air-dried soils, these indices showed close relationship with flush of CO₂ production following rewetting of the soils. In comparison, MBC determined with the chloroform fumigation-extraction technique had relatively weaker correlation with soil respiration rate. After 7 d pre-incubation, soil respiration was still closely correlated with the C availability indices in the pre-incubated soils, but poorly correlated with MBC determined with three different techniques—chloroform fumigation extraction, substrate-induced respiration, and chloroform fumigation-incubation methods. Results of multiple regression analyses, together with the above observations, suggested that soil respiration under favourable temperature and moisture conditions was principally determined by substrate supply rather than by the pool size of MBC. The specific respiratory activity of microorganisms (CO₂-C/MBC) following rewetting of air-dried soils or after 7 d pre-incubation was positively correlated with substrate availability, but negatively correlated with microbial pool size. Clay content had no significant effect on CO₂ production rate, relative C mineralization rate (CO₂-C/TOC) and specific respiratory activity of MBC during the first week incubation of rewetted dry soils. However, significant protective effect of clay on C mineralization was shown for the pre-incubated soils. These results suggested that the protective effect of clay on soil organic matter decomposition became significant as the substrate supply and microbial demand approached to an equilibrium state. Thereafter, soil respiration would be dependent on the replenishment of the labile substrate from the bulk organic C pool.     

添加调节N和P浓度后的植物残体对土壤呼吸作用、微生物量和养分有效性的影响

Microbial activity and nutrient release are known to be influenced by organic matter properties,but it is difficult to separate the effect of C/N ratio from that of C/P ratio because in most plant residues both ratios are either high or low.An incubation experimeut was conducted to investigate the effects of reducing the C/N and C/P ratios of slowly decomposable plant residues (young eucalyptus leaves,mature wheat straw,and sawdust) to those of rapidly decomposable residues (young kikuyu shoots) on soil respiration,microbial biomass,and N and P availability.The C/N and C/P ratios of the former were adjusted to 15 and 89,respectively,by adding N as (NH4)2SO4,P as KH2PO4 or both and residues were added at 10 g C kg-1 to a silt loam.Soil respiration was measured over 21 d;microbial biomass C (MBC) and available N and P were measured on days 0,7,and 21.Compared to the unamended soil,addition of kikuyu increased cumulative respiration 20-fold,MBC concentration 4 to 8-fold,and available P concentration up to 4-fold,whereas the increase in available N concentration was small and transient.Cumulative respiration and MBC concentration were low in the sawdust-amended soil and were not influenced by reducing the C/N and C/P ratios.Cumulative respiration with original wheat and eucalyptus was 30％-40％ of that with kikuyu.Reducing the C/N ratio alone or both C/N and C/P ratios increased cumulative respiration and MBC concentration 2-fold compared to the original wheat and eucalyptus,whereas reducing the C/P ratio had little effect.Throughout the experiment,the available N concentration after addition of residues with reduced C/N ratio increased in the following order of eucalyptus ＜ wheat ＜ sawdust.By independently lowering the C/N and C/P ratios,microbial activity was more limited by C and N than P.However,lowering the C/N ratio of very slowly decomposable sawdust had no effect on soil respiration and MBC concentration,suggesting that other properties such as concentration of poorly decomposable C compounds limited decomposition.     

Distribution of microbial communities in a forest soil profile investigated by microbial biomass, soil respiration and DGGE of total and extracellular DNA

We studied the distribution of the indigenous bacterial and fungal communities in a forest soil profile. The composition of bacterial and fungal communities was assessed by denaturing gradient gel electrophoresis (DGGE) of total and extracellular DNA extracted from all the soil horizons. Microbial biomass C and basal respiration were also measured to assess changes in both microbial biomass and activity throughout the soil profile. The 16S rDNA-DGGE revealed composite banding patterns reflecting the high bacterial diversity as expected for a forest soil, whereas 18S rDNA-DGGE analysis showed a certain stability and a lower diversity in the fungal communities. The banding patterns of the different horizons reflected changes in the microbial community structure with increasing depth. In particular, the DGGE analysis evidenced complex banding patterns for the upper A1 and A2 horizons, and a less diverse microflora in the deeper horizons. The low diversity and the presence of specific microbial communities in the B horizons, and in particular in the deeper ones, can be attributed to the selective environment represented by this portion of the soil profile. The eubacterial profiles obtained from the extracellular DNA revealed the presence of some bands not present in the total DNA patterns. This could be interpreted as the remainders of bacteria not any more present in the soil because of changes of edaphic conditions and consequent shifting in the microbial composition. These characteristic bands, present in all the horizons with the exception of the A1, should support the concept that the extracellular DNA is able to persist within the soil. Furthermore, the comparison between the total and extracellular 16S rDNA-DGGE profiles suggested a downwards movement of the extracellular DNA.     

Legacies of organic matter removal: decreased microbial biomass nitrogen and net N mineralization in New Zealand Pinus radiata plantations

The effect of variations in organic matter removal during harvesting on microbial biomass nitrogen was determined in four Pinus radiata plantations between 9 and 17 years after harvesting. Variation in microbial biomass nitrogen with season and the response of net nitrogen mineralization to organic matter removal after 9 and 17 years were also determined at two of the sites. The microbial biomass nitrogen in the fermentation-humus (FH) layer was correlated with litter fall characteristics and did not vary with organic matter removal, but the total mass of microbial biomass nitrogen in the FH layer was significantly reduced by increased organic matter removal. The microbial biomass nitrogen in the mineral soil was decreased by increased organic matter removal and was strongly correlated with moisture content and total nitrogen concentration. The FH layer microbial biomass nitrogen did not vary with season, but mineral soil microbial biomass nitrogen varied with season at one site, probably due to increased moisture availability. Net nitrogen mineralization in the mineral soil, determined by an anaerobic incubation, was decreased by increased organic matter removal and was strongly correlated with microbial biomass nitrogen. The persistence of the significant differences in microbial biomass nitrogen and net nitrogen mineralization indicated that variations in organic matter removal during harvesting have long-term effects on soil microbial properties and activity during the life of the subsequent rotation. This has implications for the selection of harvesting techniques to promote the maintenance of site productivity and to minimise disruption to the soil biota.     

Influence of erosion on soil microbial biomass,abundance and community diversity

This study aimed to determine microbial biomass carbon and microbial abundance immediately after, and two years after, forest soil erosion, so as to estimate the degree of damage, including the rate of recovery of microorganisms, in each area. It also aimed to determine the community diversity, and to establish relationships between microbial biomass, microbial abundance and the physico‐chemical properties of the soil. Three different study areas in Hiroshima Prefecture, Japan, were used. One undisturbed area and two eroded areas (one immediately after and one two years after erosion). The analysis of variance showed a highly significant difference in microbial biomass carbon and abundance between the study areas. The undisturbed area showed the highest value, followed by the area eroded two years ago, then lastly the area studied immediately after the erosion. The biomass carbon was highly correlated with gram positive bacteria with r² = 0·983, p < 0·01. The biomass carbon and microbial population were shown to be significantly correlated to the soil's physico‐chemical properties, such as pH, moisture content, water‐holding capacity and CN ratio. However, CN ratio proved to be closely correlated to biomass carbon with r² = −0·978, p < 0·01, to Gram‐positive bacteria with r² = −0·977, p < 0·01, to Gram‐negative bacteria with r² = −0·989, p < 0·01 and to fungi with r² = −0·977, p < 0·01. The undisturbed area showed a highly diverse community in both of the restriction enzymes used, followed by the area affected by erosion two years ago, then the area immediately after erosion. Copyright © 2004 John Wiley & Sons, Ltd.