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1.
Samples were collected from 36 cats with feline herpesvirus (FHV-1)-related ocular disease (conjunctivitis, epithelial or stromal keratitis, or corneal sequestration), and 17 cats without ocular changes. Corneoconjunctival swabs, scrapings and biopsies were tested in various combinations for presence of FHV-1 DNA using single round (sr) polymerase chain reaction (PCR) and nested PCR (nPCR). Additional swabs from the inferior conjunctival fornix were tested by enzyme-linked immunosorbent assay for Chlamydophila felis antigen. Cytologic evaluation was carried out on conjunctival (cats with conjunctivitis) and corneal (cats with keratitis) cytobrush preparations. FHV-1 DNA was detected by PCR in 14 (39%) cats with ocular disease and 1 (6%) of the control group. Agreement between srPCR and nPCR results was significant (P < 0.01). FHV-1 DNA was detected in 3/7 cats with conjunctivitis, 5/6 cats with epithelial keratitis, 3/11 cats with stromal keratitis, and 3/12 cats with corneal sequestration. There was a significant association (P = 0.0027) between viral presence and epithelial keratitis. However, no significant association was found between viral presence and conjunctivitis (P = 0.059), stromal keratitis (P = 0.15), or corneal sequestration (P = 0.18). With respect to FHV-1 DNA detection, intersample agreement was significant (P < 0.03). No sampling technique seemed more likely than another to harvest detectable viral DNA, except for cats with corneal sequestrum in which viral DNA was not detected using corneoconjunctival swabs. FHV-1 DNA was detected in 6/9 samples with intranuclear inclusion bodies and in 6/7 cats with eosinophils on cytologic examination. All samples tested negative for C. felis antigen.  相似文献   

2.
为建立一种快速、准确检测流产嗜衣原体(C.abortus)Taq Man-MGB荧光定量PCR方法,本研究根据C.abortus主要外膜蛋白基因的特异保守序列设计引物及探针,并优化反应条件,建立了检测C.abortus的荧光定量PCR方法。结果表明,以重组质粒为标准品建立的标准曲线在1.6×103拷贝/μL~1.6×107拷贝/μL内具有良好的线性关系,相关系数为0.9999。该方法仅对C.abortus的靶基因扩增呈阳性,而对鹦鹉热嗜衣原体、家畜嗜衣原体、鼠衣原体、沙眼衣原体、肺炎嗜衣原体、猪源衣原体核酸扩增结果均为阴性,特异性强;其最低检出限为1.6拷贝/μL;组内和组间重复性试验变异系数均小于3%,具有良好的重复性。利用建立的方法和普通PCR方法同时对225份临床样品进行检测,结果显示荧光定量PCR检出率比普通PCR高4.5%,表现较高的灵敏度和准确性。本研究建立的方法对C.abortus的临床鉴别检测和疾病诊断具有重要意义。  相似文献   

3.
    
AIM: To develop a real-time PCR for the detection of Mycoplasma agalactiae, using PCR primers targeting the ma-mp81 gene.

METHODS: A group of 15 M. agalactiae isolates, 21 other Mycoplasma spp. isolates and 21 other bacterial isolates was used in evaluation of the assay.

RESULTS: All M. agalactiae isolates were detected by the assay and none of the non-target isolates was amplified. The analytical detection limit of the assay was 10 fg of purified genomic DNA and 104 cfu/ml milk inoculated with M. agalactiae. When applied to goat-milk samples collected from three herds free of M. agalactiae infection, the assay had a specificity of 100%.

CONCLUSIONS: The assay would be useful in a diagnostic laboratory, providing specific, sensitive and rapid detection of M. agalactiae.  相似文献   

4.
采用PCR方法从弓形虫RH株和CN株总DNA中分别扩增到18S rDNA基因,与pGEM-T easy vector连接,并进行DNA测序分析。结果表明,2个虫株均扩增出1745bp的片段,用DNAMAN软件对其与GenBank上2个虫株相应序列进行同源性比较,4个虫株的同源性为99.34%。刚地弓形虫虫株在不同宿主和不同区域上存在着一定的差异。  相似文献   

5.
火鸡隐孢子虫18S核糖体DNA部分序列测定与系统发育分析   总被引:4,自引:0,他引:4  
从长春地区鸭的粪便中分离纯化了火鸡隐孢子虫(Cryptosporidium meleagridis)卵囊,根据隐孢子虫18S rDNA基因序列设计合成引物,用PCR扩增了卵囊基因组DNA大小586bp的片段,PCR产物经电泳鉴定后用试剂盒回收纯化,纯化后PCR产物直接测序,将测得的序列用Dnastar软件分析并与国外已发表的相应序列进行了同源性比较,并绘制了系统发育进化树。结果初步建立了火鸡隐孢子虫的PCR检测方法,序列分析显示长春外国语源火鸡隐孢子虫与国外9株隐孢子虫相应序旬同源性在82.7%-99.8%之间,其中与国外火鸡源火允隐孢子虫相应序列同源性为85.3%;与C.felis同源性最低,与C.muris同源性最高。本研究为火鸡隐孢子虫病诊断及该病分子流行病学研究打下了良好基础。  相似文献   

6.
菲莱氏温扬球虫是鸭球虫病的重要病原之一,为了寻找种特异性的遗传标记,本研究采集广东省某鸭场的新鲜鸭粪,通过Sheather's蔗糖漂浮法收集球虫卵囊,经形态学鉴定为菲莱氏温扬球虫;提取该球虫DNA样品,经过PCR扩增,首次获得了该虫的18S rDNA基因部分片段;对该基因进行了克隆和测序,比较了该虫株与其他原虫的亲缘关系.结果显示,对菲莱氏温扬球虫序列与艾美耳科其他球虫关系较近,系统进化树分析属于艾美耳科的另一分支.表明18S rDNA基因在鸭菲莱氏温扬球虫的分类鉴定上是一种有效的分子标记.  相似文献   

7.
猪化脓隐秘杆菌的分离与鉴定   总被引:3,自引:1,他引:2  
从一例肝、肺化脓性结节,脾出血性肿大的病猪体内分离到一株革兰氏阳性、细长、形态不规则的杆菌,该菌在TSA平板、普通绵羊血琼脂、巧克力平板上生长缓慢,在普通绵羊血琼脂上呈α-溶血。对该菌的16S rDNA进行PCR扩增、测序、比较,结果显示该菌与化脓隐秘杆菌的16S rDNA有99%的同源性,进一步用API生化鉴定,结果也与其相符。该菌在24~52 h内100%致死小白鼠,腹腔接种新西兰兔,接种兔72 h内死亡,表明该菌为致病性细菌。  相似文献   

8.
对伊氏锥虫(Trypanosoma evansi):新疆株(XJCA)、湖北株(HBM)、云南株(YNB)、广东株(GDB2);马媾疫锥虫(Trypanosoma equiperdum)、布氏锥虫(Trypanosoma brucei)、刚果锥虫(Trypanosoma congolense)提取基因组DNA,根据已报道的伊氏锥虫株18SrDNA基因序列设计合成引物,用PCR扩增了锥虫虫株基因组DNA,伊氏锥虫新疆株、湖北株、云南株、广东株、布氏锥虫、刚果锥虫均为373bp的片段;马媾疫锥虫为372bp的片段,PCR产物经电泳鉴定后用试剂盒回收纯化,纯化后PCR产物经连接、转化后测序,将测得的序列用DNAMAN软件分析并与国外已发表的相应序列进行了同源性比较,并绘制了系统发育进化树。结果与国外AJ009153、AJ223564、D89527株同源性达到99%~100%,与另外11株同源性75%。本研究为锥虫分子流行病学研究及分类研究打下基础。  相似文献   

9.
为建立快速检测猪鼻支原体(M.hyorhinis)的荧光定量PCR方法,本研究根据GenBank中登录的p37基因序列设计并合成引物及MGB探针,构建含有p37基因的重组质粒,以其为标准品绘制标准曲线,并检测该方法的特异性、敏感性和重复性.结果显示该方法具有良好的特异性,与猪肺炎支原体、猪絮状支原体、猪滑液支原体、鸡毒支原体、副猪嗜血杆菌、猪胸膜肺炎放线杆菌、猪圆环病毒、猪瘟病毒及猪流感病毒无交叉反应,对M.hyorhinis的检测敏感性为10拷贝/μL,并且稳定性好,变异系数小于2%.利用建立的荧光定量PCR方法对55份临床样品进行检测,阳性检出率为87.3%(48/55),而分离培养方法和普通PCR的阳性检出率分别为41.8%(23/55)和29.1% (16/55).该结果表明,建立的方法特异性强、敏感性高、稳定性好,可以用于M.hyorhinis临床样品的检测,对M.hyorhinis的快速和定量检测具有重要意义.  相似文献   

10.
    
Protothecosis is an uncommon disease caused by algae of the genus Prototheca. In dogs, the infection is usually first localized to the colon but has the propensity to later disseminate hematogenously to many other organs, with marked tropism for the eyes and central nervous system. Diagnosis is established by culture and/or evidence of Prototheca organisms in cytologic or histologic preparations. Species characterization, however, requires molecular investigations. Our laboratory set up a real-time PCR targeting portion D1/D2 of the 28S rRNA for identification of Prototheca species from both positive cultures (of rectal swabs and urine) and formalin-fixed, paraffin-embedded tissue. Prototheca bovis, P. ciferrii, and P. wickerhamii were characterized in 11 dogs with systemic or cutaneous protothecosis. Prototheca identifications were phylogenetically consistent with the new taxonomy proposed for this genus based on the mitochondrial cytochrome b gene. As a pilot study, we screened feces and rectal scrapes from 200 asymptomatic dogs, using 2 cohorts of stray and owned animals, to determine the prevalence of intestinal carriage of Prototheca spp. The Prototheca-negative results from both cohorts of healthy dogs suggest that predisposing factors related to the host probably contribute more to the acquisition of clinical disease than exposure to contaminated environments.  相似文献   

11.
为检测从内蒙古发病牛场分离到的3株牛支原体(HS2019、HSZ2019、HSS2019)的致病性,对其进行本动物回归试验,通过观察攻毒后的临床症状、病理变化,以及应用实时荧光定量PCR确定组织器官中支原体载量,分析3株支原体的毒力.结果显示,3株牛支原体回归牛体后均使试验牛出现体温升高、咳嗽、呼吸困难等临床症状,解剖...  相似文献   

12.
为建立羊嗜血支原体(M.ovis)病快速检测方法,本实验根据GenBank中登录的羊M.ovis 16S rRNA基因序列设计一对引物,以山羊和绵羊M.ovis基因组DNA为模板,建立M.ovis PCR检测方法,并进行特异性、敏感性及临床应用试验。结果显示,建立的M.ovis PCR检测方法扩增片段大小为508 bp,与GenBank中M.ovis参考株同源性达99%以上,该方法与猪嗜血支原体、牛嗜血支原体等病原体无交叉反应,最低检测40个拷贝的DNA;通过对延边地区60份山羊和绵羊血液样本的检测结果表明,建立的PCR检测方法具有特异、敏感、准确等优点,完全适用于M.ovis的检测。  相似文献   

13.
自禽传染性支气管炎病毒流行较严重地区的患鸡组织病料中分离得到1株疑似毒株,利用鸡胚培养、气管环及动物回归试验、电镜观察、RT-PCR等多种方法及对其S1基因序列进行比较分析,确定该分离毒株为禽传染性支气管炎病毒QX型。同时针对该新分离的传染性支气管炎病毒建立了实时荧光定量PCR检测方法。结果显示:针对该分离毒株的S1基因区设计1对引物和TaqMan探针,制备质粒标准品,建立标准曲线,其线性关系为y=-3.385 7x+42.235,R2=0.999,扩增效率为97.5%,该法能区分常见禽类流行病毒,检测灵敏度可达42.1拷贝数/μL,比普通PCR检测限度高,重复性良好,因而该实时荧光定量PCR检测方法可靠。本试验同时进行了拷贝数与半数鸡胚感染量(EID50)对应关系研究,证明了在控制病毒代次、冻融次数等条件下,建立线性关系为y=0.249 2x+1.341×10~6(以拷贝数为x轴,EID50为y轴),R2=0.956 4,可实现拷贝数替代EID50。  相似文献   

14.
本研究应用PCR技术扩增来自广东的3株柔嫩艾美耳球虫的28S rRNA基因部分序列,并与GenBankTM登录的柔嫩艾美耳球虫、堆型艾美耳球虫、鼠肉孢子虫和刚地弓形虫虫株的相应序列进行比对分析。试验结果显示,柔嫩艾美耳球虫3个样品均获得1172 bp的28S rRNA基因部分有效序列,不同虫株序列没有差异,与GenBankTM登录的柔嫩艾美耳球虫相应序列只有一个碱基差异,显示种内序列高度保守,而与堆型艾美耳球虫、鼠肉孢子虫、刚地弓形虫相应的序列存在不同程度的差异。结果表明,28S rRNA基因部分序列可作为研究艾美耳球虫种间及其他顶复门原虫遗传变异的标记。  相似文献   

15.
16.
为探究不同直径有腔卵泡中猪卵巢颗粒细胞的生理机能差异,以期为后续生殖毒理学研究奠定基础。采用剖剪法获取猪卵巢内三种直径范围的有腔卵泡(小型〈2mm,中型2-5mm,大型≥5mm)并获得颗粒细胞,台盼蓝染色方法计算细胞存活率,倒置显微镜下观察细胞形态并计算细胞纯度,实时定量方法检测促卵泡刺激素受体基因(FSHR)及促黄体生成素受体基因(LHR)的表达进一步鉴定颗粒细胞,四甲基偶氮唑蓝(MTT)法测定细胞生长曲线。结果显示从大中小三种不同直径有腔卵泡中获得的猪卵巢颗粒细胞存活率分别为68%、75%、72%,纯度分别为97%、95%、90%;细胞生长曲线表明,从24h开始进入对数生长期,并于120h达到最大值,且中型卵泡中获得的颗粒细胞生长增殖状态最佳;实时定量结果显示FSHR在猪三种直径的有腔卵泡颗粒细胞中均表达阳性,且呈现差异。  相似文献   

17.
A real-time PCR for detection and quantification of M. ovipneumoniae was developed using 9 recently sequenced M. ovipneumoniae genomes and primers targeting a putative adhesin gene p113. The assay proved to be specific and sensitive (with a detection limit of 22 genomic DNA) and could quantify M. ovipneumoniae DNA over a wide linear range, from 2.2 × 102 to 2.2 × 107 genomes.  相似文献   

18.
Background: ‘Candidatus Mycoplasma turicensis’ (CMtc) is a hemotrophic bacterial species that can, alone or in combination, induce anemia in cats. The diagnostic test of choice for hemoplasma infections is PCR. Conventional PCR assays have been developed for the detection of Mycoplasma haemofelis (Mhf) and ‘Candidatus M. haemominutum’ (CMhm) but not for CMtc. Although real‐time PCR assays have been reported for all of the feline hemoplasmas, the expense of necessary instrumentation precludes its use in Brazil and many other countries. Objectives: The goals of this study were to develop and optimize a conventional PCR assay to diagnose CMtc using an internal control to detect false‐negative results, and to evaluate the occurrence of CMtc infection in domestic cats from Brazil. Methods: Species‐specific primers were designed and a PCR assay was developed for the detection of CMtc 16S rDNA in cat blood. Sensitivity was determined by serial 10‐fold dilutions of plasmid and DNA extracted from blood from an experimentally infected cat. EDTA blood samples from 373 cats were collected. DNA was extracted using a silica‐based protocol and tested using the PCR assay. Results: Primer concentration, annealing temperature, and MgCl2 concentration were optimized in the presence and absence of the internal control. Two samples negative for the internal control were excluded. Of the remaining 371 samples (117 healthy and 254 unhealthy cats), 17 (4.6%) were positive for CMtc. Conclusion: These results demonstrate the utility of an optimized PCR assay to detect CMtc in feline blood samples. We also report for the first time the prevalence of CMtc infection in domestic cats in Brazil.  相似文献   

19.
本文报道了用聚合酶链反应(PCR)获取IBvM_(41)株和广东肾变株D_(41)免疫原(Sl)基因的研究情况,所用引物为IBVBeaudette株S1基因两侧的对应序列,跨幅为1.7kb;DNA模板为IBVM_(41)和D_(41)株经病毒RNA提取后反转录而得;结果表明,2株病毒所获的PCR产物与预期一致。  相似文献   

20.
为建立一种猪德尔塔病毒(PDCoV)的快速检测方法,本研究根据NCBI公布的PDCoV序列设计了1对特异性引物,利用RT-PCR方法扩增PDCoV的S基因,将其连接至pMD 19-T载体上,以构建正确的重组质粒作为标准品,建立SYBR Green Ⅰ实时荧光定量PCR检测方法,并对该方法的敏感性、特异性及重复性进行了验...  相似文献   

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