Responses of soil microbial biomass and community composition to biological soil crusts in the revegetated areas of the Tengger Desert

As a key component of desert ecosystems, biological soil crusts (BSCs) play an important role in dune fixation and maintaining soil biota. Soil microbial properties associated with the colonization and development of BSCs may indicate soil quality changes, particularly following dune stabilization. However, very little is known about the influence of BSCs on soil microbes in sand dunes. We examined the influence of BSCs on soil microbial biomass and community composition in revegetated areas of the Tengger Desert. BSCs increased soil microbial biomass (biomass C and N), microbial phospholipid fatty acid (PLFA) concentrations and the ratio of fungal to bacterial PLFAs. The effects varied with crust type and crust age. Moss crusts had higher microbial biomass and microbial PLFA concentrations than cyanobacteria-lichen crusts. Crust age was positively correlated with microbial biomass C and N, microbial PLFA concentrations, bacterial PLFA concentrations, fungal PLFA concentrations and the ratio of fungal to bacterial PLFAs. BSCs significantly affected microbial biomass C and N in the 0–20 cm soil layers, showing a significant negative correlation with soil depth. The study demonstrated that the colonization and development of BSCs was beneficial for soil microbial properties and soil quality in the revegetated areas. This can be attributed to BSCs increasing topsoil thickness after dunes have been stabilized, creating suitable habitats and providing an essential food source for soil microbes.     

Effects of ecological restoration on microbial activity,microbial functional diversity,and soil organic matter in mixed-oak forests of southern Ohio,USA

As a result of many decades of fire suppression and atmospheric deposition the deciduous forests of eastern North America have changed significantly in stem density, basal area, tree size-frequency distribution, and community structure. Consequently, soil organic matter quality and quantity, nutrient availability, and microbial activity have likely been altered. This study evaluated the effects of four alternative forest ecosystem restoration strategies on soil microbial activity, microbial functional diversity, soil organic C, and soil N status in two mixed-oak (Quercus spp.) forests in southern Ohio, USA. The soils of these forests were sampled during the fourth growing season after application of (1) prescribed fire, (2) thinning of the understory and midstory to pre-settlement characteristics, (3) the combination of fire and thinning, and (4) an untreated control. Prescribed fire, with or without thinning, resulted in increased bacterial but not fungal activity when assessed using Biolog^®. In contrast, assays of acid phosphatase and phenol oxidase activity indicated greater microbial activity in the thinning treatment than in the other three treatments. Functional diversity of both bacteria and fungi was affected by restoration treatment, with the bacterial and fungal assemblages present in the thin + burn sites and the fungal assemblage present in the thinned sites differing significantly from those of the control and burned sites. Treatments did not result in significant differences in soil organic C content among experimental sites; however, the soil C:N ratio was significantly greater in thinned sites than in sites given the other three treatments. Similarly, there were no significant differences in dissolve inorganic N, dissolved organic N, or microbial biomass N among treatments. Bacterial and fungal functional diversity was altered significantly. Based on Biolog^® utilization treatments the bacterial assemblage in the thin-only treatment appeared to be relatively N-limited and the fungal assemblage relatively C-limited, whereas in the thin + burn treatment this was reversed. Although effects of restoration treatments on soil organic matter and overall microbial activity may not persist through the fourth post-treatment year, effects on microbial functional diversity are persistent.     

Soil organic matter and water-stable aggregates under different tillage and residue conditions in a tropical dryland agroecosystem

Changes in the proportions of water-stable soil aggregates, organic C, total N and soil microbial biomass C and N, due to tillage reduction (conventional, minimum and zero tillage) and crop residue manipulation (retained or removed) conditions were studied in a tropical rice–barley dryland agroecosystem. The values of soil organic C and total N were the highest (11.1 and 1.33 g kg⁻¹ soil, respectively) in the minimum tillage and residue retained (MT+R) treatment and the lowest (7.8 and 0.87 g kg⁻¹, respectively) in conventional tillage and residue removed (CT−R) treatment. Tillage reduction from conventional to minimum and zero conditions along with residue retention (MT+R,ZT+R) increased the proportion of macroaggregates in soil (21–42% over control). The greatest increase was recorded in MT+R treatment and the smallest increase in conventional tillage and residue retained (CT+R) treatment. The lowest values of organic C and total N (7.0–8.9 and 0.82–0.88 g kg⁻¹ soil, respectively) in macro- and microaggregates were recorded in CT−R treatment. However, the highest values of organic C and total N (8.6–12.6 and 1.22–1.36 g kg⁻¹, respectively) were recorded in MT+R treatment. The per cent increase in the amount of organic C in macroaggregates was greater than in microaggregates. In all treatments, macroaggregates showed wider C/N ratio than in microaggregates. Soil microbial biomass C and N ranged from 235 to 427 and 23.9 to 49.7 mg kg⁻¹ in CT−R and MT+R treatments, respectively. Soil organic C, total N, and microbial biomass C and N were strongly correlated with soil macroaggregates. Residue retention in combination with tillage reduction (MT+R) resulted in the greatest increase in microbial biomass C and N (82–104% over control). These variables showed better correlations with macroaggregates than other soil parameters. Thus, it is suggested that the organic matter addition due to residue retention along with tillage reduction accelerates the formation of macroaggregates through an increase in the microbial biomass content in soil.     

Influence of organic Crotalaria juncea hay and ammonium nitrate fertilizers on soil nematode communities

Comparisons of organic and inorganic fertilizer effects on nematode communities depend on the specific organic fertilizer used. Field experiments were conducted during 2001 and 2002 in a squash (Cucurbita pepo) agroecosystem to determine if applying sunn hemp (Crotalaria juncea) hay as an organic fertilizer improved nematode communities involved in soil nutrient cycling compared to an equivalent N rate (100 kg N/ha) of ammonium nitrate. Fertilizer source had minimal effect on nematode communities in 2001 when treatments were applied after a winter cover crop of oats (Avena sativa), but differences (P ≤ 0.05) between the fertilizer sources occurred in 2002 when no winter cover cropping preceded squash. Fertilization with sunn hemp hay increased abundance of the bacterivore guilds Ba₁ and Ba₂, and increased fungivores at the end of the experiment. Compared to ammonium nitrate, fertilization with sunn hemp hay resulted in a community with lower maturity index, higher enrichment index, and lower channel index, consistent with a disturbed and nutrient-enriched soil food web undergoing bacterial decomposition. Sunn hemp hay occasionally stimulated omnivorous nematodes, but suppressed plant-parasitic nematodes relative to ammonium nitrate fertilizer. Increasing the sunn hemp hay rate to 200 kg N/ha increased the abundance of bacterivores, fungivores, and predatory nematodes, and total nematode abundance compared to hay at 100 kg N/ha. Fertilization with ammonium nitrate increased the percentage of herbivores, but reduced percentage and abundance of omnivores. In conclusion, sunn hemp fertilizer maintained greater numbers of nematodes involved in nutrient cycling as compared to ammonium nitrate.     

Methanotrophic communities in a landfill cover soil as revealed by [13C] PLFAs and respiratory quinones: Impact of high methane addition and landfill leachate irrigation

The soil microbial communities of a landfill cover substrate, which was treated with landfill gas (100 l CH₄ m^?2 d^?1) and landfill leachate for 1.5 years, were investigated by phospholipid fatty acid (PLFA), ergosterol and respiratory quinone analyses. The natural ¹³C depletion of methane was used to assess the activity of methanotrophs and carbon turnover in the soil system. Under methane addition, the soil microbial community was dominated by PLFAs (14:0 and 16:1 isomers) and quinones (ubiquinone-8 and 18-methylene-ubiquinone-8) related to type I methanotrophs, and 18:1 PLFAs contained in type II methanotrophs. While type I methanotrophic PLFAs were ¹³C depleted, i.e. type I methanotrophs were actively oxidising and assimilating methane, ¹³C depletion of 18:1 PLFAs was low and inconsistent with their abundance. This, possibly reflects isotopic discrimination, assimilation of carbon derived from type I methanotrophs and a high contribution of non-methanotrophic bacteria to the 18:1 isomers. Landfill leachate irrigation caused the methanotrophic community to shift closer to the soil surface. It also decreased 18:1 PLFAs, while type I methanotrophs were probably stimulated. Gram positive bacteria, but not fungi, were also ¹³C depleted and consequently involved in the secondary turnover of carbon originating from methanotrophic bacteria. Cy17:0 PLFA was ¹³C depleted in deep soil layers, indicating anaerobic methane oxidation.     

Effect of nitrogen and phosphate fertilisers on microbial and nematode diversity in pasture soils

Soil microbial and nematode populations, soil microbial community structure, and microbial and nematode functional diversity were studied in two fertiliser trials on perennial pasture at three sampling times. The N trial involved the application of 0, 200 and 400 kg N ha⁻¹ y⁻¹ in the form of urea. The P trial involved the application of 0, 30, 50 and 100 kg P ha⁻¹ y⁻¹ as superphosphate. The purpose of this study was to determine biological characteristics that may be used as indicators of soil quality as affected by fertiliser inputs.The N or P treatments had no effect on total bacteria, cellulolytic microbes, or the fluorescein diacetate hydrolysis. The fungus Fusarium culmorum was found only in the 200 kg N treatment (P<0.01). Gliocladium roseum declined in isolation frequency with increasing N (P<0.05,) while other Gliocladium spp. increased (P<0.01).The microbial community structure, ecophysiological index (EP), and colony-development index (CD) were determined using: colony development rates in 1/10 tryptose soy agar (TSA), a Pseudomonas medium, and a nutrient poor medium. These parameters were not affected by the addition of the N or P fertilisers. In the N trial, the functional diversity of soil microbes, as determined by Shannon Diversity Index (H) and average well colour development (AWCD) (using Biolog gram negative microplates) was higher in the unfertilised than fertilised treatments. The values for H and AWCD were 4.2 and 0.78 in the unfertilised compared to 4.0 and 0.53 in fertilised treatment (P<0.01, 48 h, mean for both N treatments), respectively. There were no significant differences in these values in the P trial.Populations of the plant feeding nematodes Pratylenchus and Paratylenchus were greater (P<0.05) whereas those of Meloidogyne were lower (P<0.001), in soils fertilsed with N than in unfertilised soils. The genera Aporcelaimus, Dorylaimellus, and Tylencholaimellus were found only in control plots and their loss paralleled faunal changes resulting from pasture improvement reported elsewhere. Nematode Maturity Index (MI) values were 1.78, 1.85, and 1.53 for the N fertiliser treatments (P<0.05) suggesting a reduction at 400 kg N. The MI was not affected by the application of P (mean, 2.01), however, but all values in the P trial were greater than in the N trial. In the N and P trials an average of 29 and 35 nematode taxa were discriminated. The ratio of bacterial-feeding nematodes to bacterial-feeding plus fungal-feeding nematodes was similar across all treatments of the N (0.90–0.92) and P (0.84–0.90) trials, suggesting no relative change in the importance of bacterial- and fungal-mediated decomposition pathways in these soils as a result of fertiliser application.The finding that most microbiological characteristics did not respond to many years of fertiliser treatments suggests that the microbial community in the soils are similar and fertiliser amendments are insufficient to induce changes (either direct or indirect due to plant effects) in these communities. However, the consistent decrease in functional diversity of soil microflora and nematode populations with the application N, but not P, indicates that the N application can impact on community structure.     

Timing patterns of nitrogen application alter plant production and CO2 efflux in an alpine meadow on the Tibetan Plateau,China

Nitrogen (N) availability is an important factor that determines ecosystem productivity and respiration, especially in N-limited alpine ecosystems. However, the magnitude of this response depends on the timing and amounts of N input. Moreover, we have only a limited understanding of the potential effects of the timing of N fertilization on ecosystem carbon (C) and N processes, and activities of the soil microbes. A nitrogen fertilization experiment was conducted in an alpine meadow on the Tibetan Plateau to determine how plant productivity and ecosystem respiration (RE) respond to the timing and amount of N application. In this study, half of the N was added either in the early spring (ES), before the growing season, or in the late fall (LF), after the growing season. All treatments received the other half of the N in mid-July. Three N levels (10, 20, 40 kg N hm⁻² yr⁻¹) were used for each of two N treatments, with no N addition used as a control. Plant aboveground biomass, ecosystem respiration (RE) and soil respiration (RS) were measured for the 2011 and 2012 growing seasons. The LF treatment enhanced ecosystem CO₂ efflux compared with the ES treatment at high N addition levels, resulting from an increase of soil dissolved organic C (DOC) and soil microbial activity. The ES treatment resulted in increased plant aboveground biomass when compared with LF during both growing seasons, although this increase accounted for little variation in ecosystem and soil respiration. Overall, the ES treatment is likely to increase the ecosystem C pool, while the LF treatment could accelerate ecosystem C cycling, especially for the high N treatment. Our results suggest that supplying N during the early stage of the growing season benefits both forage production and soil C sequestration in this alpine ecosystem.     

Carbon flow into microbial and fungal biomass as a basis for the belowground food web of agroecosystems

The origin and quantity of plant inputs to soil are primary factors controlling the size and structure of the soil microbial community. The present study aimed to elucidate and quantify the carbon (C) flow from both root and shoot litter residues into soil organic, extractable, microbial and fungal C pools. Using the shift in C stable isotope values associated with replacing C3 by C4 plants we followed root- vs. shoot litter-derived C resources into different soil C pools. We established the following treatments: Corn Maize (CM), Fodder Maize (FM), Wheat + maize Litter (WL) and Wheat (W) as reference. The Corn Maize treatment provided root- as well as shoot litter-derived C (without corn cobs) whereas Fodder Maize (FM) provided only root-derived C (aboveground shoot material was removed). Maize shoot litter was applied on the Wheat + maize Litter (WL) plots to trace the incorporation of C4 litter C into soil microorganisms. Soil samples were taken three times per year (summer, autumn, winter) over two growing seasons. Maize-derived C signal was detectable after three to six months in the following pools: soil organic C (C_org), extractable organic C (EOC), microbial biomass (C_mic) and fungal biomass (ergosterol). In spite of the lower amounts of root- than of shoot litter-derived C inputs, similar amounts were incorporated into each of the C pools in the FM and WL treatments, indicating greater importance of the root- than shoot litter-derived resources for the soil microorganisms as a basis for the belowground food web. In the CM plots twice as much maize-derived C was incorporated into the pools. After two years, maize-derived C in the CM treatment contributed 14.1, 24.7, 46.6 and 76.2% to C_org, EOC, C_mic and ergosterol pools, respectively. Fungi incorporated maize-derived C to a greater extent than did total soil microbial biomass.     

Naphthalene addition to soil surfaces: A feasible method to reduce soil micro-arthropods with negligible direct effects on soil C dynamics

Soil fauna are a key component of soil biodiversity and a driver of soil functioning. While the importance of soil fauna is well recognized, quantitative estimates of the role of soil fauna on soil biogeochemical processes, such as plant litter decomposition, are limited by methodological constraints. The addition of naphthalene, a polycyclic aromatic hydrocarbon (C₁₀H₈), to suppress soil fauna has been used for decades in decomposition experiments, but its efficacy remains questioned. In fact, we lack a rigorous field assessment of the efficacy of naphthalene additions for soil fauna suppression and potential non-target effects on the soil microbial community and carbon cycling. We added naphthalene at a high rate (477 g m⁻²) monthly for 23 months on the bare soil surface of a tallgrass prairie. We determined the effect of such additions on the abundance of nematodes and micro-arthropods along the soil profile to a depth of 20 cm at 11, 16 and 23 months after initiating naphthalene application. We used the variation in the natural ¹³C abundance of the naphthalene (δ¹³C – 25.5‰) as compared to the native soil (δ¹³C ∼ −17‰) to quantify naphthalene contribution to soil CO₂ efflux and microbial biomarkers (PLFA). Naphthalene addition significantly reduced the abundance of oribatid mites (−45%), predatory mites (−52%) and springtails (−49%), but did not affect nematode abundance. The ¹³C abundance of a few Gram-negative (cy17:0, 18:1ω7c, 16:1ω7c), Gram-positive (a15:0, i15:0) and Actinobacteria (10Me-16:0, 10Me-18:0) PLFA markers decreased significantly in naphthalene treated plots, indicating bacterial utilization of naphthalene-derived C. Mixing models showed this contribution to be highly variable, with the highest naphthalene-C incorporation for Gram negative bacteria. Naphthalene-C was not incorporated in fungal PLFAs. This microbial utilization did not affect overall microbial abundance, community structure or activity, estimated as soil respiration. This experiment proves that naphthalene addition is a feasible method to reduce soil micro-arthropods in the field, with negligible direct effects on soil nematodes, microbial abundance and C dynamics.     

Factors controlling mineralization of soil organic matter in the Eurasian steppe

To understand the dynamics of soil organic matter (SOM) in the Eurasian steppe, several soil and meteorological properties were tested in order to estimate the amounts of potentially mineralizable organic carbon (PMC) and nitrogen (PMN). Total 41 surface soil samples were collected in Ukraine and Kazakhstan from cropland, forest, grassland, and desert ecosystems. The fresh soils were incubated for 133 days under constant temperature and moisture conditions, and the CO₂ emissions and the mineral N from the soils were monitored. PMC and PMN were determined by fitting models to the cumulative curves of the CO₂ and the mineral N. Tested soil properties included soil pH, sand, silt and clay contents, carbon and nitrogen contents of light fraction (LF, <1.6 g cm^?3) and heavy fraction (HF), and C/N ratio of LF and HF. The meteorological properties considered were mean annual temperature and precipitation. Using multiple regression analysis with the stepwise method, PMC was well estimated by carbon content of LF (LFC) and clay content, compared to the simple correlation with organic carbon (OC). Similarly, PMN was better determined by nitrogen content of LF (LFN) and clay content. These results suggest the partially labile nature of clay-associating OM and of LFC and LFN. The higher PMC and PMN in the forest and grassland sites would be attributed to the higher LFC and LFN, while the lower LFC and LFN in cropland sites would suggest the relatively higher contribution of clay-associating OM to PMC and PMN.     

Microbial mineralization of biochar and wheat straw mixture in soil: A short-term study

A short-term incubation study was carried out to investigate the effect of biochar addition to soil on CO₂ emissions, microbial biomass, soil soluble carbon (C) nitrogen (N) and nitrate–nitrogen (NO₃–N). Four soil treatments were investigated: soil only (control); soil + 5% biochar; soil + 0.5% wheat straw; soil + 5% biochar + 0.5% wheat straw. The biochar used was obtained from hardwood by pyrolysis at 500 °C. Periodic measurements of soil respiration, microbial biomass, soluble organic C, N and NO₃–N were performed throughout the experiment (84 days). Only 2.8% of the added biochar C was respired, whereas 56% of the added wheat straw C was decomposed. Total net CO₂ emitted by soil respiration suggested that wheat straw had no priming effect on biochar C decomposition. Moreover, wheat straw significantly increased microbial C and N and at the same time decreased soluble organic N. On the other hand, biochar did not influence microbial biomass nor soluble organic N. Thus it is possible to conclude that biochar was a very stable C source and could be an efficient, long-term strategy to sequester C in soils. Moreover, the addition of crop residues together with biochar could actively reduce the soil N leaching potential by means of N immobilization.     

Microbial biomass and activity in salt affected soils under arid conditions

The effects of salinity on the size, activity and community structure of soil microorganisms in salt affected arid soils were investigated in Shuangta region of west central Anxi County, Gansu Province, China. Eleven soils were selected which had an electrical conductivity (EC) gradient of 0.32–23.05 mS cm⁻¹. There was a significant negative exponential relationship between EC and microbial biomass C, the percentage of soil organic C present as microbial biomass C, microbial biomass N, microbial biomass N to total N ratio, basal soil respiration, fluorescein diacetate (FDA) hydrolysis rate, arginine ammonification rate and potentially mineralizable N. The exponential relationships with EC demonstrate the highly detrimental effect that soil salinity had on the microbial community. In contrast, the metabolic quotient (qCO₂) was positively correlated with EC, and a quadratic relationship between qCO₂ and EC was observed. There was an inverse relationship between qCO₂ and microbial biomass C. These results indicate that higher salinity resulted in a smaller, more stressed microbial community which was less metabolically efficient. The biomass C to biomass N ratio tended to be lower in soils with higher salinity, reflecting the bacterial dominance in microbial biomass in saline soils. Consequently, our data suggest that salinity is a stressful environment for soil microorganisms.     

Effect of subsurface clay on nematode communities in a sandy soil

A variety of soil properties can directly or indirectly affect nematode community structure. The effects of subsurface clay content (at 20–40 cm depth) on nematodes in the surface layer (0–20 cm depth) of a sandy soil were examined in field experiments in Florida, USA. Plots were established in a site with a relatively uniform sandy upper soil layer (88–91% sand and 5–7% clay at 0–20 cm depth) but with varying levels of clay in the subsurface layer (3–35% clay at 20–40 cm depth). Nematode numbers in the surface soil layer were affected by the amount of clay in the subsurface layer. Population densities of a number of different nematode genera were greater in the surface layer of plots with 35% subsurface clay than in plots with 3% subsurface clay. Indices of nematode community structure were largely unaffected, since effects of subsurface clay were observed across all nematode groups. Most nematodes (70–80% of total numbers) occurred at 0–20 cm depth, although Teratocephalus was more common at 20–40 than at 0–20 cm. Subsurface clay content indirectly affected soil moisture and other environmental factors in the upper soil layer in which most nematodes reside.     

Effects of vegetation on soil microbial C,N, and P dynamics in a tropical forest and savanna of Central Africa

The forest–savanna transition zone is widely distributed on nutrient-poor oxisols in Central Africa. To reveal and compare the nutrient cycle in relation to soil microbes for forest and savanna vegetation in this area, we evaluated seasonal fluctuations in microbial biomass carbon (MBC), nitrogen (MBN), and phosphorus (MBP) for 13 months as well as soil moisture, temperature, soil pH levels, and nutrients for both vegetation types in eastern Cameroon. Soil pH was significantly lower in forest (4.3) than in savanna (5.6), and soil N availability was greater in forest (87.1 mg N kg⁻¹ soil) than in savanna (32.9 mg N kg⁻¹ soil). We found a significant positive correlation between soil moisture and MBP in forest, indicating the importance of organic P mineralization for MBP, whereas in savanna, we found a significant positive correlation between soil N availability and MBP, indicating N limitation for MBP. These results suggest that for soil microbes, forest is an N-saturated and P-limited ecosystem, whereas savanna is an N-limited ecosystem. Additionally, we observed a significantly lower MBN and larger MB C:N ratio in forest (50.7 mg N kg⁻¹ soil and 8.6, respectively) than in savanna (60.0 mg N kg⁻¹ soil and 6.5, respectively) during the experimental period, despite the rich soil N condition in forest. This may be due to the significantly lower soil pH in forest, which influences the different soil microbial communities (fungi-to-bacteria ratio) in forest versus savanna, and therefore, our results indicate that, in terms of microbial N dynamics, soil pH rather than soil substrate conditions controls the soil microbial communities in this area. Further studies should be focused on soil microbial community, such as PLFA, which was not evaluated in the present study.     

Microbial and microfaunal communities in phosphorus limited,grazed grassland change composition but maintain homeostatic nutrient stoichiometry

Previous results from a long-term grassland trial, located in south-east Ireland indicated conserved (homeostatic) nutrient stoichiometry of the soil microbial biomass despite widely varying soil C:N:P ratios. To determine whether this was associated with a change in microbial community structure, rather than a change in microbial physiology, this study characterized the responses of below-ground microbial and nematode community structure to P fertilization. The trial site maintained a range of P fertilisation rates (0–30 kg P ha⁻¹ yr⁻¹) which had been applied since 1968 and soil samples were collected in spring 2009, autumn 2010 and spring 2011. The microbial biomass demonstrated homeostatic stoichiometry over all sampling occasions, particularly of the C:P ratio, despite a 50-fold difference in soil solution C:P ratio. However, microbial and nematode community structure also varied with P fertilisation, indicating that nutrient ratios are maintained even though there were changes in microbial community structure. P fertilization induced a shift from fungal to bacterial dominated decomposition pathways, as indicated by the proportion of bacterial-feeding to fungal-feeding nematodes and bacterial: fungal phospholipid fatty acids (PLFAs). The altered microbial community structure was considered to result from bottom-up control of nutrient quality and quantity by altered vegetation structure and fertilizer inputs, as well as top-down pressures from the nematode community.     

Relationships between soil pH and microbial properties in a UK arable soil

Effects of changing pH along a natural continuous gradient of a UK silty-loam soil were investigated. The site was a 200 m soil transect of the Hoosfield acid strip (Rothamsted Research, UK) which has grown continuous barley for more than 100 years. This experiment provides a remarkably uniform soil pH gradient, ranging from about pH 8.3 to 3.7. Soil total and organic C and the ratio: (soil organic C)/(soil total N) decreased due to decreasing plant C inputs as the soil pH declined. As expected, the CaCO₃ concentration was greatest at very high pH values (pH > 7.5). In contrast, extractable Al concentrations increased linearly (R² = 0.94, p < 0.001) from below about pH 5.4, while extractable Mn concentrations were largest at pH 4.4 and decreased at lower pHs. Biomass C and biomass ninhydrin-N were greatest above pH 7. There were statistically significant relationships between soil pH and biomass C (R² = 0.80, p < 0.001), biomass ninhydrin-N (R² = 0.90, p < 0.001), organic C (R² = 0.83, p < 0.001) and total N (R² = 0.83, p < 0.001), confirming the importance of soil organic matter and pH in stimulating microbial biomass growth. Soil CO₂ evolution increased as pH increased (R² = 0.97, p < 0.001). In contrast, the respiratory quotient (qCO₂) had the greatest values at either end of the pH range. This is almost certainly a response to stress caused by the low p. At the highest pH, both abiotic (from CaCO₃) and biotic Co₂ will be involved so the effects of high pH on biomass activity are confounded. Microbial biomass and microbial activity tended to stabilise at pH values between about 5 and 7 because the differences in organic C, total N and Al concentrations within this pH range were small. This work has established clear relationships between microbial biomass and microbial activity over an extremely wide soil pH range and within a single soil type. In contrast, most other studies have used soils of both different pH and soil type to make similar comparisons. In the latter case, the effects of soil pH on microbial properties are confounded with effects of different soil types, vegetation cover and local climatic conditions.     

Chemical and microbiological soil quality indicators and their potential to differentiate fertilization regimes in temperate agroecosystems

The study examined the interrelationships between chemical and microbiological quality indicators of soil and their ability to differentiate plots under contrasting fertilization regimes. The study was based on a long-term field experiment established on an Udic Ustocrepts in 1966. The soil was cropped with maize (Zea mays L.) and winter wheat (Triticum aestivum L.) and received no organic fertilization (control), wheat straw and maize stalk (crop residue) or cattle manure (manure) in combination with increasing levels of mineral N (N₀ and N₂₀₀). To asses whether seasonal fluctuations of measured properties might mask the effects of fertilization, soil samples were collected four times within a growing season. Manure amendment increased soil TOC and TN, while crop residue amendment had no significant effects. Mineral N increased TN only in April, while in September it decreased water extractable organic C (WEOC). Data of diffuse reflectance Fourier transform mid-infrared spectroscopy (DRIFTS) gave evidence for a higher relative contribution of the aliphatic peak at 2930 cm⁻¹ and a lower relative contribution of the aromatic peaks at 1620 cm⁻¹ and 1520 cm⁻¹ under manure. Manure amendment stimulated enzymatic activities, increased microbial biomass carbon (C_mic) and total phospholipids (PLFAs), and reduced the metabolic quotient (qCO₂). Patterns of PLFAs indicated that manure amendment increased the ratio of Gram-positive to Gram-negative bacteria. Crop residue amendment had no significant effects, while in September mineral N inhibited protease activity and reduced the Gram-positive to Gram-negative ratio. Microbial-related parameters fluctuated over time but their seasonality did not hamper the identification of fertilization-induced effects. The selected properties proved to be valuable indicators of long-term changes of soil quality and were strongly interrelated: changes in soil organic matter content and composition induced by manure amendment were accompanied by changes in abundance and function of the soil microbial community. Partial least square analysis obtained relating DRIFTS spectra to measured soil properties produced accurate predictive models for TOC and PLFAs, and moderately accurate models for C_mic, showing the potential of DRIFTS to be used as a rapid soil testing technique for soil quality monitoring.     

Changes in soil microbial biomass and functional diversity with a nitrogen gradient in soil columns

Fertilization generates nutrient patches that may impact soil microbial activity. In this study, nitrogen patches were generated by adding ammonium sulfate or urea to soil columns (length 25 cm; internal diameter 7.2 cm). Changes in nitrogen transformation, soil microbial biomass, and microbial functional diversity with the nitrogen gradients were investigated to evaluate the response of microbial activity to chemical fertilizer nutrient patches. After applying of ammonium sulfate or urea, the added nitrogen migrated about 7 cm. Microbial biomass carbon (MBC) was lower in fertilized soil than in the control (CK) treatment at the same soil layers. MBC increased with soil depth while microbial biomass nitrogen (MBN) decreased. BIOLOG analysis indicated that the average well color development (AWCD) and functional diversity indices of the microbial communities were lower in the 1 cm and 2 cm soil layers after application of ammonium sulfate; the highest values were in the 3 cm soil layer. AWCD and Shannon indices from the 1 to 5 cm soil layers were higher than those from other soil layers under urea application. Both principal component analysis and carbon substrate utilization analysis showed significant separation of soil microbial communities among different soil layers under application of ammonium sulfate or urea. Microbial activity was substantially decreased when NH₄⁺-N concentration was higher than 528.5 mg kg⁻¹ (1–3 cm soil layer under ammonium sulfate application) or 536.8 mg kg⁻¹ (1 cm soil layer under urea application). These findings indicated that changes in soil microbial biomass and microbial functional diversity can occur with a nitrogen gradient. The extent of changes depends on the nitrogen concentration and the form of inorganic fertilizer.     

Influence of soil phosphorus status and nitrogen addition on carbon mineralization from 14C-labelled glucose in pasture soils

 This study examines the effect of soil P status and N addition on the decomposition of ¹⁴C-labelled glucose to assess the consequences of reduced fertilizer inputs on the functioning of pastoral systems. A contrast in soil P fertility was obtained by selecting two hill pasture soils with different fertilizer history. At the two selected sites, representing low (LF) and high (HF) fertility status, total P concentrations were 640 and 820 mg kg^–1 and annual pasture production was 4,868 and 14,120 kg DM ha^–1 respectively. Soils were amended with ¹⁴C-labelled glucose (2,076 mg C kg^–1 soil), with and without the addition of N (207 mg kg^–1 soil), and incubated for 168 days. During incubation, the amounts of ¹⁴CO₂ respired, microbial biomass C and ¹⁴C, microbial biomass P, extractable inorganic P (P_i) and net N mineralization were determined periodically. Carbon turnover was greatly influenced by nutrient P availability. The amount of glucose-derived ¹⁴CO₂ production was high (72%) in the HF and low (67%) in the LF soil, as were microbial biomass C and P concentrations. The ¹⁴C that remained in the microbial biomass at the end of the 6-month incubation was higher in the LF soil (15%) than in the HF soil (11%). Fluctuations in P_i in the LF soil during incubation were small compared with those in HF soil, suggesting that P was cycling through microbial biomass. The concentrations of P_i were significantly greater in the HF samples throughout the incubation than in the LF samples. Net N mineralization and nitrification rates were also low in the LF soils, indicating a slow turnover of microorganisms under limited nutrient supply. Addition of N had little effect on biomass ¹⁴C and glucose utilization. This suggests that, at limiting P fertility, C turnover is retarded because microbial biomass becomes less efficient in the utilization of substrates. Received: 18 October 1999     

Conversion of grassland to coniferous woodland has limited effects on soil nitrogen cycle processes

In the last century, conversion of native North American grasslands to Juniperus virginiana forests or woodlands has dramatically altered ecosystem structure and significantly increased ecosystem carbon (C) stocks. We compared soils under recently established J. virginiana forests and adjacent native C₄-dominated grassland to assess changes in potential soil nitrogen (N) transformations and plant available N. Over a 2-year period, concentrations of extractable inorganic N were measured in soils from forest and grassland sites. Potential gross N ammonification, nitrification, and consumption rates were determined using ¹⁵N isotope-dilution under laboratory conditions, controlling for soil temperature and moisture content. Potential nitrification rates (V_max) and microbial biomass, as well as soil physical and chemical properties were also assessed. Extractable NH₄⁺ concentrations were significantly greater in grassland soils across the study period (P ≤ 0.01), but analysis by date indicated that differences in extractable inorganic N occurred more frequently in fall and winter, when grasses were senescent but J. virginiana was still active. Laboratory-based rates of gross N mineralization (ammonification) and nitrification were greater in grassland soils (P ≤ 0.05), but only on one of four dates. Potential nitrification rates (V_max) were an order of magnitude greater than gross nitrification rates in both ecosystems, suggesting that nitrification is highly constrained by NH₄⁺ availability. Differences in plant uptake of N, C inputs, and soil microclimate as forests replace grasslands may influence plant available N in the field, as evidenced by seasonal differences in soil extractable NH₄⁺, and total soil C and N accumulation. However, we found few differences in potential soil N transformations under laboratory conditions, suggesting that this grassland-to-forest conversion caused little change in mineralizable organic N pools or potential microbial activity.