Genetic structure of Lima bean (<Emphasis Type="Italic">Phaseolus lunatus</Emphasis> L.) landraces grown in the Mayan area

Lima bean (Phaseolus lunatus L.) is an important crop in the Mayan culture. The Mayan area, considered as a main center of Mesoamerican diversity, has been divided into two subareas: the Mayan lowlands and the Mayan highlands. The Yucatan Peninsula is part of the Mayan lowlands and holds the highest number of Lima bean landraces of Mexico, but Lima beans are in high risk of genetic erosion due to intensification of the traditional Mayan agriculture. However, information on genetic diversity of Lima beans of the Mayan highlands is lacking. By using 46 landraces collected in the Mayan area (23 from each subarea) and 73 ISSR loci (inter-simple sequence repeats), we analyzed the structure, diversity and genetic relationships of Lima beans of this part of Mesoamerica. High levels of diversity (H _BAY = 0.45) and genetic structure (F _ST = 0.66) were found for the whole Mayan area. Genetic diversity in the Mayan lowlands was apparently higher than the Mayan highlands (H _BAY = 0.44 and 0.36, respectively); but differences were not statistically significant. Genetic structure between the subareas was high (AMOVA = 30% of total variation), most landraces grouping according to their geographic origin. This study shows the importance of the Mayan culture in the diversification and conservation of Lima beans. The results provide important information that should be considered when implementing strategies to collect Lima bean landraces and planning in situ and ex situ programs to conserve these landraces in the Mayan region.     

Analysis of average standardized SSR allele size supports domestication of soybean along the Yellow River

Soybean (Glycine max) was domesticated in China from its wild progenitor G. soja. The geographic region of domestication is, however, not exactly known. Here we employed the directional evolution of SSR (microsatellite) repeats (which mutate preferentially into longer alleles) to analyze the domestication process and to infer the most ancestral soybean landraces. In this study, the average standardized SSR allele sizes across 42 SSR loci in 62 accessions of G. soja were determined, and compared with those in 1504 landraces of G. max, collected from all over China and representing the diversity in the gene bank. The standardized SSR allele size in the landraces (0.009) was significantly (P = 8.63 × 10^?58) larger than those in G. soja (?0.406). Pairwise comparisons between inferred clusters and sub-clusters of Chinese landraces indicated that the average standardized SSR allele size also increased with the further differentiation of landraces populations. Spring-sowed types had the shortest size, followed by summer-sown types, while the sub-cluster of autumn-sown type had the largest length. The spring-sowed landraces located near the middle region along the Yellow River had the smallest allele sizes, indicating that this is the most ancestral population of cultivated soybean. We concluded that soybean was most likely domesticated in the middle region of the Yellow River in central China, initially as a spring-sown type.     

Genetic diversity analysis of yams (Dioscorea spp.) cultivated in China using ISSR and SRAP markers

Yam (Dioscorea spp.) is widely cultivated in China and many landraces are maintained by local farmers. However, there is little information available about their diversity and species identity. In this study, inter simple sequence repeat (ISSR) and sequence related amplified polymorphism (SRAP) techniques were used to assess genetic diversity within 21 yam landraces from seven cultivated populations. We observed high level of polymorphism among these landraces, specifically, 95.3 % for ISSR and 93.5 % for SRAP. Analysis of molecular variance revealed a significantly greater variation among the four yam species (40.39 %) and their populations (35.78 %) than within the populations (23.83 %). The unweighted pair group method arithmetic averages clusters and principal component analysis for 21 landraces formed four well-separated groups containing landraces of each of the four species, namely, Dioscorea opposita Thunb., Dioscorea alata L., Dioscorea persimilis Prain et Burkill, and Dioscorea fordii Prain et Burkill. The ISSR and SRAP primers were highly discriminatory among the 21 landraces; all 21 landraces could be easily differentiated using these primers. The average mean of gene flow (Nm = 0.1081) estimated from high genetic differentiation (Gst = 0.8222) suggested that gene flow among the populations was relatively restricted. The lack of genetic diversity within individual yam species suggests that it is critical to develop long-term strategies for enhancing genetic diversity within various yam species.     

Population genetics of traditional landraces of <Emphasis Type="Italic">Cucurbita pepo</Emphasis> L., 1753 in the cloud forest in Baja Verapaz,Guatemala

Little is known regarding the effect of fragmentation and human agricultural management on the genetic variation and gene flow of Cucurbita pepo L., 1753 in moderate fragmented areas in central Guatemala. We hypothesize that the genetic variation of C. pepo is affected by forest fragmentation and by traditional agricultural management. Therefore, we aim to determine: (1) the genetic diversity and genetic structure of C. pepo in the Cloud Forest Corridor (CFC) (2) the extent of genetic admixture between commercial variety (CV) and traditional landraces (TL) of C. pepo, (3) the effect of habitat fragmentation in the population genetics of C. pepo with a landscape approach, and (4) the potential relationship between traditional management practices and genetic diversity of C. pepo in the CFC. We detected the existence of high level of genetic diversity (AR = 3.43; He = 0.50), inbreeding (Fis = 0.25) and moderate population structure of C. pepo in the CFC (Fst = 0.16). No correlation between landscape and genetics was found. Also, we found high genetic admixture between CV and TL. It seems that human practices, mainly related with seed exchange patterns, could affect genetic diversity of C. pepo in the CFC. C. pepo populations in the CFC are structured, with inbreeding, and show admixture with the CV, an aspect that could affect its genetic diversity. The agricultural management influenced the population genetics of C. pepo in the CFC, but the landscape did not. We suggest that special efforts should be made to preserve the diversity of this important indigenous food source for Guatemalan people as well as their management practices.     

Characterization of volatile compounds of Mezcal, an ethnic alcoholic beverage obtained from Agave salmiana

Commercial mezcals (white, white with worm, rested, rested with worm, and aged) produced from Agave salmiana were analyzed by solid-phase microextraction-gas chromatography-mass spectrometry (SPME-GC-MS). Thirty-seven compounds were identified, and nine of them were classified as major compounds of mezcal (MCM). Saturated alcohols, ethyl acetate, ethyl 2-hydroxypropanoate, and acetic acid form the MCM group. Minor compounds of mezcal group include other alcohols, aldehydes, ketones, large chain ethyl esters, organic acids, furans, terpenes, alkenes, and alkynes. Most of the compounds found in mezcals in this study are similar to those present in tequilas and other alcoholic beverages. However, mezcals contain unique compounds such as limonene and pentyl butanoate, which can be used as markers for the authenticity of mezcal produced from A. salmiana.     

Keys for and morphological character variation in some Egyptian cultivars of Cucurbitaceae

The cultivated varieties and landraces of Cucurbitaceae growing in Egypt are presented, 27 taxa, belonging to three genera, six species, and five subspecies. These characters are arranged according to their usefulness for identifications as follow: fruit characters, seed characters and trichome type. Fruit characters are a good taxonomic tool at varietal level when combined with the other vegetative characters. Two keys to 27 cultivated varieties of Cucurbitaceae (Cucumis, Cucurbita and Luffa) were constructed using the DELTA software system. One key is used for identification, and then the other is used as a confirmatory key. Those keys were built using 36 morphological characters include vegetative, floral, fruit and seed characters. There is a significant correlation between seed size and growth parameters. The growth parameters of the studied taxa included leaf length/size, petiole length and corolla length. There is a highly positive, significant correlation between seed volume and leaf size (r = 0.81831, P ≤ 0.001), seed volume and petiole length (r = 0.79112, P ≤ 0.001), seed volume and leaf length (r = 0.83566, P ≤ 0.001), and seed volume and corolla length (r = 0.59108, P ≤ 0.001).     

Sonochemical Degradation of Chlorinated Phenolic Compounds in Water: Effects of Physicochemical Properties of the Compounds on Degradation

This study examined a comparative degradation of various chlorinated phenolic compounds including phenol, 4-chlorophenol (4-CP), 2,6-dichlorophenol (2,6-DCP), 2,4,6-trichlorophenol (2,4,6-TCP), 2,3,4,6-tetrachlorophenol (2,3,4,6-TeCP), and pentachlorophenol (PCP) using 28, 580, and 1,000 kHz ultrasonic reactors. The concentration of hydrogen peroxide was also determined in order to investigate the efficacy of different sonochemical reactors for hydroxyl radical production. Clearly, it was observed that the 580 kHz sonochemical reactor had maximum efficacy for hydroxyl radical production. The degradation of all the compounds followed the order; 580 kHz (91?C93%) > 1,000 kHz (84?C86%) > 28 kHz (17?C34%) with an initial concentration of 2.5 mg L^?1 at a reaction time of 40 min with ultrasonic power of 200 ± 3 W and aqueous temperature of 20 ± 1°C in each experiment. Overall, the degradation of those phenolic compounds followed the order, PCP > 2,3,4,6-TeCP > 2,4,6-TCP > 2,6-DCP > 4-CP > phenol at various frequencies in the presence/absence of a radical scavenger (tert-butyl alcohol). It was revealed that the correlations between the compound degradation rates and the physicochemical parameters, R ² = 0.99 for octanol?Cwater partition coefficient, R ² = 0.95 for water solubility, R ² = 0.94 for vapor pressure, and R ² = 0.88 for Henry??s law constant, excluding PCP, were very good in the entire range of each parameter.     

Early coconut distillation and the origins of mezcal and tequila spirits in west-central Mexico

No evidence exists of distillation in Mexico before European contact. The Philippine people in Colima established the practice in the 16th Century to produce coconut spirits. Botanical, toponymic, archaeological, and ethnohistoric data are presented indicating that agave distillation began in Colima, in the lower Armería-Ayuquila and Coahuayana-Tuxpan river basins, using Agave angustifolia Haw. and through adaptation of the Philippine coconut spirits distillation technique. Subsequent selection and cultivation of agaves led to their domestication and diversification. This did not take place in the lower river basins, where agave populations tended to disappear. The distillation technique spread to the foothills of Colima volcanoes and from there to all of western Mexico, leading to creation of tequila and other agave spirits. Two factors aided producers in avoiding strict Colonial prohibitions and were therefore key to the diffusion and persistence of agave spirits production: (1) clandestine fermentation in sealed, underground pits carved from bedrock, a native, pre-European contact technique; and (2) small, easy-to-use Philippine-type stills that could be hidden from authorities and allowed use of a broad range of agave species. Dedicated to Henry Bruman in honor of his contribution to the understanding of coconut and agave genetic resources history in America.     

The Sierra Norte of Madrid: an agrobiodiversity refuge for common bean landraces

At the mountain area close to the city of Madrid, common beans were one of the main food crops present in everyday diet until 1960. This paper describes the morphological diversity, for forty-six phenological and morphological traits, found in forty-three traditional varieties of common beans collected in this area and seven commercial varieties used as reference. That comparison suggests that common bean breeding programs have led to later varieties with a higher production of straight pods. Quantitative traits showed also similar values when compared to the Iberian common bean collection, except for the phenological and seed size characters. The phenological differences could suggest an ecological adaptation of the studied landraces to the regional environmental conditions. The different seed size averages of both collections might correspond to the scarce presence of smaller seed-type common beans in Madrid collection. All the accessions collected in the Sierra Norte of Madrid belong to any of the groups included in the Spanish core collection. Madrilenian collection is also composed by indeterminate growth habit varieties, while the presence of bush accessions is relatively uncommon. Most of the Madrilenian landraces have a remarkable fitness for green-pod consumption (42 %) and their seeds are mainly white (30 %), ovate-shape (49 %) and medium-large (40 %). The study of seed storage protein allowed to classify the landraces according to their domesticated gene pools. Most of them (72 %), with T and C phaseolin type, seem to belong to Andean germplasm, while the remaining (28 %), with S and B phaseolin type, to Mesoamerican one. The remarkable morphological diversity of common beans found in this small area is a symptom of a broad genetic base despite genetic erosion, what indicates a widespread crop in the past. Therefore, it is advisable to design agro-environmental policies to promote the production and commercialization of common bean landraces in Sierra Norte of Madrid.     

Nitrogen Fixation and N-Balance Studies on Bambara Groundnut (Vigna subterranea L. Verdc) Landraces Grown on Tropical Acidic Soils of Malaysia

Bambara groundnut has great potential as an alternative crop for improving food security in its production regions and beyond. A field experiment was conducted at the Field Research Centre of the Crops for the Future to obtain information on the nitrogen (N) fixation and N balance of Bambara groundnut landraces on tropical acidic soils of Malaysia. Treatments consisted of three Bambara groundnut landraces (Ex-Sokoto, Kaaro, and NN-1) laid out in a randomized complete block design replicated three times. Results obtained revealed that Ex-Sokoto landrace was greater in yield and N fixation, whereas N balance (-haulm) was greater in NN-1 landrace. The results revealed grain yield of 703–2256 kg ha^?1 and N fixation from 32–81 kg ha^?1 and suggest that Bambara groundnut could be integrated into a cereal-based cropping system. Ex-Sokoto landrace appeared to be the most promising for yield and N fixation under Malaysian acidic soil conditions.     

Prediction of tillage operation strategies for dryland wheat production in a degraded loess soil

Conservation tillage systems are advocated worldwide for sustainable crop production; however, their favorable effects on soil properties are subject to the length of their use. The following study aimed at using the CENTURY agroecosystem model to simulate long-term changes in soil organic carbon (SOC) fractions and wheat (Triticum aestivum L.) production. Tillage systems include conventional tillage (CT, control), minimum tillage, chisel plow (CP) and zero tillage with (R⁺) and without residues (R^?) in fallow-wheat system. The model validation with 2-year field experiment showed that the simulated results were strongly correlated with observed results for total organic carbon (r² = 0.94), active soil carbon (r² = 0.91), slow soil carbon (r² = 0.84) and passive soil carbon (r² = 0.85). Similarly, model simulations for biomass and grain yields were, respectively, 81% and 76% correlated with observed results. The long-term simulations predicted that SOC stock and its fractions will gradually build up, crop biomass and grain yield will enhance with crop residue retention, especially under chisel plough in comparison of existing CT system. The study concludes that CP and retention of crop residues have potential to improve SOC contents and ultimately crop production.     

Native maize landraces from Los Tuxtlas, Mexico show varying mycorrhizal dependency for P uptake

Different degrees of dependency on the activity of arbuscular mycorrhizal fungi (AMF) exist between native maize landraces and hybrids. In Los Tuxtlas, Mexico, the Popoluca people maintain a traditional polycultural land management with more than 15 native landraces of maize; however, it is not known whether the recent substitution of local maize for improved hybrids and fertilization has affected the integrity of the mycorrhizal symbiosis in these naturally phosphorus-poor systems. A greenhouse experiment was conducted to evaluate the response of four Popoluca maize landraces and the hybrid Texcoco to the presence of native AMF in conditions of low and medium P input (5 and 65 mg kg^?1, respectively). After 120 days in both P treatments, the native landraces Black and Yellow presented higher colonization and had acquired more P in their shoot biomass than the hybrid. The moderate fertilization did not appear to have affected the integrity of the mycorrhizal symbiosis, since all of the maize types presented a positive mycorrhizal dependency (2–14 %). Under low P conditions, the Texcoco hybrid maize presented one of the highest mycorrhizal dependencies; however, unlike the local landraces, this was not reflected in a higher tissue P concentration. The results obtained indicate that the native maize Black was the best at capturing symbiotic and direct P, which makes this landrace an important genetic and cultural heritage for the Popoluca and for the world.     

Genetic diversity and population structure of a common bean (Phaseolus vulgaris L.) collection from Calabria (Italy)

Eighty-seven Phaseolus vulgaris landraces, still cultivated in Calabria (Italy), were investigated in order to study the patterns of common bean genetic diversity in this region, to better understand the evolutionary development of beans in Europe and to properly manage these genetic resources. Four American accessions and five Italian varieties were also included. Different markers, such as 12 microsatellites, seed traits, phaseolins and 100-seed weight were combined with different statistical approaches. For each microsatellite, expected (H _e ) and observed (H _o ) heterozygosities, polymorphism information content (PIC), probability of identity (PI) and homozygosity were calculated. Furthermore, in Calabrian group of bean landraces, total (N _a ) and private (N _pa ) number of alleles, observed (H _o ), expected heterozygosities (H _e ) and allelic richness (AR) were calculated. Genetic distances among landraces were estimated using Nei’s coefficient and a cluster analysis using the UPGMA algorithm was performed. The results clearly indicated that: (1) Calabrian germplasm showed a high level of diversity (H _e  = 0.595); (2) Mesoamerican and Andean gene pools were clearly distinguished in Calabrian germplasm, with the Andean gene pool predominating (83 %); (3) Calabrian landraces were largely hybridized within and between the gene pools. A model-based approach, using the STRUCTURE software, was adopted. Six groups, including 4 of Andean origin and one of Mesoamerican origin were identified. Even more interesting, a small group (8 %) showed a distinct genetic structure, in which interspecific hybridizations with runner bean (Phaseolus coccineus L.) could have occurred. Nevertheless, a relatively high proportion of Calabrian bean landraces (12.6 %) was derived from intra and interspecific hybridizations.     

Assessment of biochemical and antioxidant diversities in a shallot germplasm collection from Vietnam and its surrounding countries

The shallot is considered an important genetic resource for Allium breeding programs because, compared to the bulb onion, the shallot contains higher levels of several functional chemical compounds. However, there may be differences in content, composition and beneficial activity among shallot landraces. This study was carried out to characterize the differences in phenolic, quercetin, sugar, S-alk(en)yl-l-cystein sulfoxide (ACSO), and saponin contents and antioxidant capacities of a shallot germplasm including 31 strains derived from different regions of Vietnam and six other countries. A wide variation was observed in the quantitative analyses of the chemical contents. Shallots with high contents of polyphenols, saponins, and quercetins were found in the south of Vietnam and other low-latitude countries. Meanwhile, those possessing fairly high ACSO and sugar contents were observed in the north of Vietnam. Qualitative analysis of saponins via thin layer chromatography did not show clear variation among shallot strains, but polymorphism was observed between the shallot and other Allium species, such as A. roylei. The principal component analysis could clearly discriminate shallot strains by their geographical origins. All shallot strains showed potent antioxidant activities in a DPPH assay. The highest antioxidant capacity was in the strains possessing relatively high contents of polyphenol, quercetin, and saponin. Significant correlations were found between antioxidant capacity (IC ₅₀ ^?1 ) and four groups of chemical compounds (polyphenols, quercetins, saponins, and ACSOs) (r = 0.40–0.59). A strong correlation was observed between IC ₅₀ ^?1 and quercetin contents (r = 0.59, p < 0.01). The six Fusarium-inoculated shallot strains seemed to be adequately resistant against disease, and the levels of resistance may be related to the saponin content in the bulb tissues.     

Farmers perception of pesticide use and genetic erosion of landraces of tetraploid wheat (<Emphasis Type="Italic">Triticum</Emphasis> spp.) in Ethiopia

Perception of farmers’ about the use of pesticides and genetic erosion of tetraploid wheat landraces of Ethiopia was assessed through focus group discussions with farmers, on-farm observations, personal interviews with farmers, by using structured questionnaires of temporal and spatial methods. A total of 1496 farmers from seven provinces in the country were interviewed. Farmers’ knowledge about pesticide increases suggests that they are not happy on using chemicals because of their negative impact on farm land. About 75 % of the farmers believe that, although the use of pesticides may increase the production of wheat, it has a negative impact on (human) health and environment. Women showed a higher concern for pesticides’ harmfulness than men. Farmers’ valuation of genetic erosion was estimated as reduced importance of landraces, as shown by a the lower proportion of landraces either grown or sold on the market. The four most important factors cited for loss of landraces were reduction in land area per capita, displacement by released/modern varieties of hexaploid wheat and teff, reduced benefit from landraces, and displacement by other crops and chat. Genetic erosion of 100 % was observed for Triticum dicoccon in the provinces of Gojam and Gonder and for T. polonicum in Tigray and Gojam. Overall, genetic erosion in the country was 32.0, 35.3, 55.9, 84.4 and 84.4 % for T. durum Desf., T. turgidum L., T. aethiopicum Jakubz., T. polonicum L. and T. dicoccon Schrank, respectively.     

Growth and nitrogen uptake of jack pine seedlings in response to exponential fertilization and weed control in reclaimed soil

We evaluated the impact of exponential fertilization in nursery and weed removal in the field on growth and nitrogen (N) retranslocation and uptake from the soil of jack pine (Pinus banksiana Lamb.) seedlings planted on an oil sands reclaimed soil. Exponential fertilization is a method of supplying nutrients at an exponential rate to achieve constant internal nutrient concentrations in seedlings without changing their size during their growth in the nursery. The N retranslocation in seedlings was traced using ¹⁵N isotope labeling. Exponential fertilization increased nutrient reserve in the seedling in nursery production, and increased height (P = 0.003), root collar diameter (P < 0.001), total biomass (P < 0.001), and N content (P < 0.001) of seedlings at the end of first growing season in the field growth. Conventionally fertilized seedlings allocated a greater percent of biomass to roots than to current-year needles. The ¹⁵N isotope analysis showed that 59 to 82% of total N demand of new growth was met by retranslocation from old tissues. Exponential fertilization increased N retranslocation by 147% (P < 0.001) and N uptake from the soil by 175% (P = 0.012). Weed removal marginally increased (P = 0.077) N uptake from the soil but decreased (P = 0.046) N retranslocation with no net effect on total N content in new tissues. We conclude that exponential fertilization improves the early growth of jack pine and can help improve revegetation in reclaiming disturbed oil sands sites.     

Impact of Long-Term Application of Organics,Biological, and Inorganic Fertilizers on Microbial Activities in Rice-Based Cropping System

Organics, biological, and inorganic fertilizers play a crucial role for improving crop yield and soil properties. Accordingly, we assessed their impact on yield, microbial activities, and transformations of carbon (C), nitrogen (N), phosphorus (P), and sulfur (S) in soils under a 12-year-old intensively cultivated rice (Oriza sativa L.), mustard (Brassica juncea L.), sesame (Sesamum indicum L.) system with sole inorganic (NPK); NPK + farmyard manure (NPKF); NPK + green manure (NPKG) (Sesbania sesban L.), and NPK + green manure + bio-fertilizer (NPKGB) (Azotobacter chroococcum+ pseudomonas putida) treatments in sub-tropical India. The system yield was much higher with NPKF (23%) and NPKGB (18%) than that with NPK. Organic supplementation had a favorable influence on soil microbial biomass C (C_mic), N (N_mic), and activities of extracellular enzymes. Results of principal component and multiple regression analyses showed significant influence of C_mic on system yield (R² = 91, p = 0.001) and S availability (R² = 62, p = 0.001). Similarly, mineralizable N and acid phosphatase could predict significantly soil available N (R² = 85, p = 0.001) and P (R² = 51; p = 0.001), respectively. Results thus indicated that integrated nutrient management (NPKF/G) improved system yield, nutrient accumulation, and microbial activities in soils.     

Plant-available zinc fixation kinetics in semi-arid alkaline soils of the Southern High Plains

This study examined zinc (Zn) fixation pattern and kinetics in three semiarid alkaline soils of the Southern High Plains, USA. Soil chemical data obtained from Zn-extraction experiments conducted at different depths were fitted to various kinetic models to examine Zn fixation patterns. Within the experimental period of 90 days, approximately 57% of the total plant-available Zn fixed occurred in the first 14 days when averaged across all soils and depths. Zinc fixation over the experimental period (90 days) was better described by the power function (pfxn) model (R² = 0.87–0.92, standard error [SE] = 0.130–0.154), but poorly described by the zero-, first- and second-order models (R² = 0.55–0.76, SE = 0.038–0.267). Average reaction rate constant (from the pfxn model) was higher in the subsurface soils (0.323), suggesting a more rapid Zn fixation, compared to the surface soils (0.293). Zinc fixation within the first 35 days was also more rapid and better described by both the second-order (R² = 0.91, SE = 0.018) and pfxn (R² = 0.92, SE = 0.119) models. Findings are applicable to field settings and kinetic parameters obtained will help to advance Zn studies and management in these semiarid soils.     

Rice landrace diversity in Nepal. Socio-economic and ecological factors determining rice landrace diversity in three agro-ecozones of Nepal based on farm surveys

In Nepal, in traditional rice farming systems many diverse landraces are grown in all of the rice agro-ecosystems from low to high altitude. Three case study sites were selected to represent the major rice agro-ecozones: Bara (100–150 m) for the low-altitude terai (plain); Kaski (700–1,206 m) for the mid-hill zone; and Jumla (2,200–3,000 m) for the high-hill zone. The diversity in rice varieties was compared in these three sites and nine survey villages in a series of surveys conducted in 1998, 1999 and 2006. The level and distribution of diversity on farm varied with the physical and socio-economic settings of the farming communities. The mid-hill site (Kaski) had the highest rice landrace diversity. This was adapted to the diverse agro-ecosystems found there and there was equal diversity in Kule khet (irrigated lands by seasonal canals) and Sim khet (marshy wet land). The next most diverse system was Nicha khet (irrigated lowlands) in Bara, the low-altitude site. The high-hill site (Jumla) had the lowest rice diversity. Across all sites many of the landraces were rarely grown and then only in small areas, reflecting the specialized uses to which they were put. At all sites the most common single landrace occupied less than half of the rice area. Resource-rich farmers were the more important custodians of on-farm rice varietal diversity across the sites. There was more rice diversity in favourable environments than in less favourable ones. This was true whether diversity was measured across sites or across rice domains within sites.     

Microsatellite mapping of genes for branched spike and soft glumes in Triticum monococcum L.

The locus responsible for branched spike in a branched spike mutant of Triticum monococcum L. (2n = 2x = 14, A^mA^m genome) and soft glume in Triticum sinskajae Filat. et Kurkiev (2n = 2x = 14, A^mA^m genome) were mapped by genotyping F₂ populations using microsatellite markers. Phenotypic analysis in the cross T. sinskajae PI 418587/a branched spike mutant KT3-24 confirmed that both characters were under control of a recessive allele at a single locus, and they were linked with 26.6 cM. The branched head in T. monococcum (bh ^m ) locus was located on chromosome 2A^mS and the marker Xgwm122 flanked the bh ^m gene distally. Soft glume locus in T. sinskajae was allelic to the soft glume (sog) locus in mm09, a soft glume mutant of T. monococcum. The sog locus was linked with Xwmc644 distally. In the F₂ hybrids of T. monococcum #252/PI 418587 and T. monococcum KT 3-21/PI 418587, sog was linked with Xgwm71. The gene fg which determines a false glume was also located on chromosome 2A^mS and the recombination between sog and fg (1.6 cM) was obtained in F₂ hybrid of KT 3-21/PI 418587.