Genetic diversity of a <Emphasis Type="Italic">Coffea</Emphasis> Germplasm Collection assessed by RAPD markers

Genetic diversity and relationships within and among nine species of Coffea, one species of Psilanthus and the Piatã hybrid from the Coffee Germplasm Collection of Instituto Agronômico de Campinas (IAC), Brazil were assessed using RAPD markers. Genetic diversity and relationships were evaluated by proportion of polymorphic loci (P), Shannon’s genetic index (H′ and G′_ST) and clustering analysis. The overall RAPD variation among all accessions was mostly partitioned between rather than within species. However, C. canephora and C. liberica showed a high genetic diversity within the species (\({\underline{\hbox{H}'}} \) _sp = 0.414 and \({\underline{\hbox{H}'}} \) _sp = 0.380, respectively) and this was highly structured (high \({\underline{\hbox{G}'}} \) _ST). Genetic diversity from C. congensis and C. arabica was also structured, but with lower levels of genetic diversity (\({\underline{\hbox{H}'}} \) _sp = 0.218 and \({\underline{\hbox{H}'}} \) _sp = 0.126, respectively). The results were consistent with agronomic and molecular studies and demonstrated that the IAC Coffea Collection is representative of the phylogenetic structure observed in the genera. This study devises sampling strategies for coffee germplasm collections and provides genetic diversity parameters for future comparisons among them.     

Radiosensitivity Studies and Radiostability of Ribulose-1,5 Bis-Carboxylase and Gas Exchange Characteristics in Wheat, Garden Pea, Field Pea, Spinach, and Okra

Implication of ureolytic biocalcification process as an efficient carbon dioxide sequestration technology was evaluated with Bacillus megaterium culture growing in a closed environment system. In three experimental sets containing either 35 % v/v CO₂ in headspace (set 1) or 50 mM urea in solution (set 3) or both (set 2), change in headspace CO₂, soluble calcium, and pH were monitored during 8 days of incubation. In absence of urea, headspace CO₂ content continued to increase in set 1 (up to 48 % v/v) without any carbonate precipitation. However, carbonate precipitation were obvious in urea containing sets (sets 2 and 3) utilizing all the added calcium (25 mM) in just 2 and 6 days, respectively. No headspace CO₂ could be detected in set 2 at the end of experimental period, and analysis suggested that this was majorly (>53 %) attributed to the solubility trapping phenomenon. Scanning electron microscopy (SEM) and X-ray diffraction (XRD) analysis revealed that the precipitates were made up of calcite and major fraction of vaterite polymorph of CaCO₃.     

Effect of crop residue C:N ratio on N2O emissions from Gray Lowland soil in Mikasa,Hokkaido, Japan

Abstract

We studied the effect of crop residues with various C:N ratios on N₂O emissions from soil. We set up five experimental plots with four types of crop residues, onion leaf (OL), soybean stem and leaf (SSL), rice straw (RS) and wheat straw (WS), and no residue (NR) on Gray Lowland soil in Mikasa, Hokkaido, Japan. The C:N ratios of these crop residues were 11.6, 14.5, 62.3, and 110, respectively. Based on the results of a questionnaire survey of farmer practices, we determined appropriate application rates: 108, 168, 110, 141 and 0 g C m^?2 and 9.3, 11.6, 1.76, 1.28 and 0 g N m^?2, respectively. We measured N₂O, CO₂ and NO fluxes using a closed chamber method. At the same time, we measured soil temperature at a depth of 5 cm, water-filled pore space (WFPS), and the concentrations of soil NH⁺ ₄-N, NO^? ₃-N and water-soluble organic carbon (WSOC). Significant peaks of N₂O and CO₂ emissions came from OL and SSL just after application, but there were no emissions from RS, WS or NR. There was a significant relationship between N₂O and CO₂ emissions in each treatment except WS, and correlations between CO₂ flux and temperature in RS, soil NH⁺ ₄-N and N₂O flux in SSL and NR, soil NH⁺ ₄-N and CO₂ flux in SSL, and WSOC and CO₂ flux in WS. The ratio of N₂O-N/NO-N increased to approximately 100 in OL and SSL as N₂O emissions increased. Cumulative N₂O and CO₂ emissions increased as the C:N ratio decreased, but not significantly. The ratio of N₂O emission to applied N ranged from ?0.43% to 0.86%, and was significantly correlated with C:N ratio (y = ?0.59 ln [x] + 2.30, r ² = 0.99, P < 0.01). The ratio of CO₂ emissions to applied C ranged from ?5.8% to 45% and was also correlated with C:N ratio, but not significantly (r ² = 0.78, P = 0.11).     

Photo-Assisted Degradation,Toxicological Assessment,and Modeling Using Artificial Neural Networks of Reactive Gray BF-2R Dye

This work investigates the degradation of Reactive Gray BF-2R dye (a blend of reactive yellow 145, reactive orange 122 and reactive black 5 dyes) using UV/H₂O₂, Fenton, and photo-Fenton-advanced oxidative processes, with artificial sunlight and UV-C radiations. The photo-Fenton process employing UV-C radiation was the most efficient under the conditions studied. The ideal conditions for the degradation of the dye, determined using a factorial design 2³ and a study of the concentration of hydrogen peroxide ([H₂O₂]), were [H₂O₂] equal to 40 mg L^?1, iron concentration [Fe] of 1 mg L^?1, and pH between 3 and 4. The Chan and Chu non-linear kinetic model predicted the kinetic data with a degradation of over 98% for color and 68% for aromatics after 60 min. The behavior of the chemical oxygen demand fitted the first-order kinetic model well, with a degradation of 64% after 60 min. The Multilayer Perceptron 7-11-2 artificial neural network model enabled to model the degradation process of the aromatics and accurately predict the experimental data. Toxicity tests indicated that the post-treatment samples were non-toxic for Escherichia coli bacteria, and Portulaca grandiflora and Basil sabory seeds. However, they inhibited the growth of Lactuca sativa seeds and Salmonella enteritidis bacteria. The photo-Fenton process with UV-C radiation degraded the dye studied efficiently and the degradation percentages were, on average, 7% and 5% higher for color than those observed when employing the Fenton and UV/H₂O₂ processes, respectively. With the aromatic, however, they were 84% and 62% higher, thus justifying the use of this process.     

The Effectiveness of Zn Leaching from EAFD Using Caustic Soda

Electric arc furnace dust (EAFD) is a toxic waste which is mainly rich in iron oxide, zinc, and lead. Hydrometallurgical extraction of zinc from Jordanian EAFD in alkaline medium was investigated; NaOH, NaHCO₃, and Na₂CO₃ were used as leaching agents. The pH values for the prepared solutions were 8.3, 8.2, and 12.55 for NaHCO₃, Na₂CO₃, and NaOH, respectively. The effect of NaOH concentration (1, 3, 5, 7, and 9 M), contact time (5 min to 3 h), temperature (20, 40, and 60), and solid-to-liquid ratio (SLR; 20, 40, 80, and 120 mg/ml) on the leachability of zinc from EAFD were tested. The initial EAFD and the resulting leach residues were characterized using X-ray diffraction (XRD) and X-ray fluorescence (XRF). EAFD contained 25.9% Zn, 18.0% Fe, and 3.2% Pb. A maximum zinc recovery of 92.9% was achieved using 6 M NaOH at 60 °C with solid loading of 20 g/L and 3 h leaching time. NaHCO₃ and Na₂CO₃ were not efficient leaching agents for Zn extraction since the recoveries were only 2.6 and 4.5%, respectively. Zn and Pb were depleted in the residues with an E-factor of 0.5–0.6 and 0.1–0.25, respectively. Iron was enriched in the residues; the E-factor was around 2. The EAFD contained mainly zincite, franklinite, and magnetite. After 3 h leaching, only traces of zincite exist in the residues, while sylvite and halite were completely dissolved.     

Life cycle inventory-based analysis of greenhouse gas emissions from arable land farming systems in Hokkaido,northern Japan

Abstract

To assess their impacts on net global warming, total greenhouse gas emissions (mainly CO₂, N₂O and CH₄) from agricultural production in arable land cropping systems in the Tokachi region of Hokkaido, Japan, were estimated using life cycle inventory (LCI) analysis. The LCI data included CO₂ emissions from on-farm and off-farm fossil fuel consumption, soil CO₂ emissions induced by the decomposition of soil organic matter, direct and indirect N₂O emissions from arable lands and CH₄ uptake by soils, which were then aggregated in CO₂-equivalents. Under plow-based conventional tillage (CT) cropping systems for winter wheat, sugar beet, adzuki bean, potato and cabbage, on-farm CO₂ emissions from fuel-consuming operations such as tractor-based field operations, truck transportation and mechanical grain drying ranged from 0.424 Mg CO₂ ha^?1 year^?1 for adzuki bean to 0.826 Mg CO₂ ha^?1 year^?1 for winter wheat. Off-farm CO₂ emissions resulting from the use of agricultural materials such as chemical fertilizers, biocides (pesticides and herbicides) and agricultural machines were estimated by input–output tables to range from 0.800 Mg CO₂ ha^?1 year^?1 for winter wheat to 1.724 Mg CO₂ ha^?1 year^?1 for sugar beet. Direct N₂O emissions previously measured in an Andosol field of this region showed a positive correlation with N fertilizer application rates. These emissions, expressed in CO₂-equivalents, ranged from 0.041 Mg CO₂ ha^?1 year^?1 for potato to 0.382 Mg CO₂ ha^?1 year^?1 for cabbage. Indirect N₂O emissions resulting from N leaching and surface runoff were estimated to range from 0.069 Mg CO₂ ha^?1 year^?1 for adzuki bean to 0.381 Mg CO₂ ha^?1 year^?1 for cabbage. The rates of CH₄ removal from the atmosphere by soil uptake were equivalent to only 0.020–0.042 Mg CO₂ ha^?1 year^?1. From the difference in the total soil C pools (0–20 cm depth) between 1981 and 2001, annual CO₂ emissions from the CT and reduced tillage (RT) soils were estimated to be 4.91 and 3.81 Mg CO₂ ha^?1 year^?1, respectively. In total, CO₂-equivalent greenhouse gas emissions under CT cropping systems in the Tokachi region of Hokkaido amounted to 6.97, 7.62, 6.44, 6.64 and 7.49 Mg CO₂ ha^?1 year^?1 for winter wheat, sugar beet, adzuki bean, potato and cabbage production, respectively. Overall, soil-derived CO₂ emissions accounted for a large proportion (64–76%) of the total greenhouse gas emissions. This illustrates that soil management practices that enhance C sequestration in soil may be an effective means to mitigate large greenhouse gas emissions from arable land cropping systems such as those in the Tokachi region of northern Japan. Under RT cropping systems, plowing after harvesting was omitted, and total greenhouse gas emissions from winter wheat, sugar beet and adzuki bean could be reduced by 18%, 4% and 18%, respectively, mainly as a result of a lower soil organic matter decomposition rate in the RT soil and a saving on the fuels used for plowing.     

Effect of land use on the abundance and diversity of autotrophic bacteria as measured by ribulose-1,5-biphosphate carboxylase/oxygenase (RubisCO) large subunit gene abundance in soils

Elucidating the biodiversity of CO₂-assimilating bacterial communities under different land uses is critical for establishing an integrated view of the carbon sequestration in agricultural systems. We therefore determined the abundance and diversity of CO₂ assimilating bacteria using terminal restriction fragment length polymorphism and quantitative PCR of the cbbL gene (which encodes ribulose-1,5-biphosphate carboxylase/oxygenase). These analyses used agricultural soils collected from a long-term experiment (Pantang Agroecosystem) in subtropical China. Soils under three typical land uses, i.e., rice–rice (RR), upland crop (UC), and paddy rice–upland crop rotation (PU), were selected. The abundance of bacterial cbbL (0.04 to 1.25?×?10⁸ copies g^?1 soil) and 16S rDNA genes (0.05–3.00?×?10¹⁰ copies g^?1 soil) were determined in these soils. They generally followed the trend RR?>?PU?>?UC. The cbbL-containing bacterial communities were dominated by facultative autotrophic bacteria such as Mycobacterium sp., Rhodopseudomonas palustris, Bradyrhizobium japonicum, Ralstonia eutropha, and Alcaligenes eutrophus. Additionally, the cbbL-containing bacterial community composition in RR soil differed from that in upland crop and paddy rice–upland crop rotations soils. Soil organic matter was the most highly statistically significant factor which positively influenced the size of the cbbL-containing population. The RR management produced the greatest abundance and diversity of cbbL-containing bacteria. These results offer new insights into the importance of microbial autotrophic CO₂ fixation in soil C cycling.     

Priming effect of bamboo (Phyllostanchys edulis Carrière) biochar application in a soil amended with legume

Abstract

Biochar application to soils can mitigate carbon dioxide (CO₂) by increasing soil carbon (C) sink, but also causes increased CO₂ released from soils through priming effects of soil organic carbon (SOC). However, priming effects of biochar application on SOC are complex, showing inconsistent results, and further complicated when applied with other substrates such as organic amendment (OA). Incubation experiments were conducted using Typic Durudand with bamboo (Phyllostanchys edulis Carrière) biochar (400°C) and OA (crotalaria) applied individually, simultaneously or with biochar applied 5 weeks prior to OA application. After 56 d of incubation, cumulative CO₂ released from soils with no amendments (control), biochar only (BC), OA only (OA), simultaneous (BC+OA), and differently timed (BCP+OA) applications reached 313, 326, 1270, 1535 and 1311 mg CO₂ kg^?1, respectively. The OA application distinctly increased CO₂ released from the soils due to its decomposition. The OA decomposition rates were comparable with OA and BC+OA, while those with BCP+OA were lower than those with other treatments during early incubation. Net CO₂ (CO_{2-(treatment)} ? CO_2-control) from soils with BC, OA, BC+OA and BCP+OA yielded 13, 957, 1222 and 998 mg CO₂ kg^?1, respectively. Primed CO_2-BC of 13 mg CO₂ kg^?1 was equivalent to 4.2% of priming effect relative to CO_2-control. Primed CO_2-BC+OA [net CO_2-BC+OA ? (net CO_2-BC + net CO_2-OA)] and primed CO_2-BCP+OA were 252 and 28 mg CO₂ kg^?1, equivalent to 26% and 2.9% of priming effects relative to sum of net CO_2-BC + net CO_2-OA, respectively. The priming effect with BC was negligible likely because of limited amounts of biochar labile C to induce co-metabolism, while BC+OA showed a modest priming effect most likely as a result of co-metabolism induced by additional mineralization of presumably SOC and/or biochar, because the OA decomposition rates were not affected by biochar application. The priming effect with BCP+OA was comparable to that with BC likely due to changes in soil properties caused by biochar application prior to OA, likely from slowed decomposition rates of OA.     

Biomineralization of atrazine and analysis of 16S rRNA and catabolic genes of atrazine degraders in a former pesticide mixing site and a machinery washing area

Purpose

The purpose of this study was to determine the first-order rate constants and half-lives of aerobic and anaerobic biomineralization of atrazine in soil samples from an agricultural farm site that had been previously used for mixing pesticide formulations and washing application equipment. Atrazine catabolic genes and atrazine-degrading bacteria in the soil samples were analyzed by molecular methods.

Materials and methods

Biomineralization of atrazine was measured in soil samples with a [U-ring-¹⁴C]-atrazine biometer technique in soil samples. Enrichment cultures growing with atrazine were derived from soil samples and they were analyzed for bacterial diversity by constructing 16S rDNA clone libraries and sequencing. Bacterial isolates were also obtained and they were screened for atrazine catabolic genes.

Results and discussion

The soils contained active atrazine-metabolizing microbial communities and both aerobic and anaerobic biomineralization of [U-ring-¹⁴C]-atrazine to ¹⁴CO₂ was demonstrated. In contrast to aerobic incubations, anaerobic biometers displayed considerable differences in the kinetics of atrazine mineralization between duplicates. Sequence analysis of 16S rDNA clone libraries constructed from the enrichment cultures revealed a preponderance of Variovorax spp. (51 %) and Schlesneria (16 %). Analysis of 16S rRNA gene sequences from pure cultures (n?=?12) isolated from enrichment cultures yielded almost exclusively Arthrobacter spp. (83 %; 10/12 isolates). PCR screening of pure culture isolates for atrazine catabolic genes detected atzB, atzC, trzD, trzN, and possibly atzA. The presence of a complete metabolic pathway was not demonstrated by the amplification of catabolic genes among these isolates.

Conclusions

The soils contained active atrazine-metabolizing microbial communities. The anaerobic biometer data showed variable response of atrazine biomineralization to external electron acceptor conditions. Partial pathways are inevitable in soil microbial communities, with metabolites linking into other catabolic and assimilative pathways of carbon and nitrogen. There was no evidence for the complete set of functional genes of the known pathways of atrazine biomineralization among the isolates.

     

Soil CO2 emission and its relationship to soil properties under different tillage systems

There is a lack of understanding as to which soil property is the most important at regulating the temporal variability of soil CO₂ emissions on China’s Loess Plateau. The objective of this study was to evaluate the CO₂ emissions and their relationships to certain soil properties in a winter wheat (Triticum aestivum L.) field subject to no-till (NT) and conventional tillage (CT) practices. The CO₂ emissions were signi?cantly higher in the CT (257.6 mg CO₂ m^?2 h^?1), compared with the NT (143.8 mg CO₂ m^?2 h^?1), treatment. Soil organic matter content and carbon stock were 8% and 14% higher, respectively, in the NT, compared with the CT, treatment. Regression analyses between the CO₂ emissions and soil properties, including soil temperature and carbon stock, explained up to 88% and 60% of the temporal variability in CO₂ emissions in the NT and CT treatments, respectively. Linear correlations between the soil temperature and CO₂ emissions were recorded in both the NT and CT treatments. Soil temperature was the most important factor in terms of understanding the temporal variability in CO₂ emissions in wheat fields of the study area.     

Effect of N addition,moisture, and temperature on soil microbial respiration and microbial biomass in forest soil at different stages of litter decomposition

Purpose

The objective of the present study was to investigate the interactive effects of nitrogen (N) addition, temperature, and moisture on soil microbial respiration, microbial biomass, and metabolic quotient (qCO₂) at different decomposition stages of different tree leaf litters.

Materials and methods

A laboratory incubation experiment with and without litter addition was conducted for 80 days at two temperatures (15 and 25 °C), two wetting intensities (35 and 50 % water-filled porosity space (WFPS)) and two doses of N addition (0 and 4.5 g N m^?2, as NH₄NO₃). The tree leaf litters included three types of broadleaf litters, a needle litter, and a mixed litter of them. Soil microbial respiration, microbial biomass, and qCO₂ along with other soil properties were measured at two decomposition stages of tree leaf litters.

Results and discussion

The increase in soil cumulative carbon dioxide (CO₂) flux and microbial biomass during the incubation depended on types of tree leaf litters, N addition, and hydrothermal conditions. Soil microbial biomass carbon (C) and N and qCO₂ were significantly greater in all litter-amended than in non-amended soils. However, the difference in the qCO₂ became smaller during the late period of incubation, especially at 25 °C. The interactive effect of temperature with soil moisture and N addition was significant for affecting the cumulative litter-derived CO₂-C flux at the early and late stages of litter decomposition. Furthermore, the interactive effect of soil moisture and N addition was significant for affecting the cumulative CO₂ flux at the late stage of litter decomposition but not early in the experiment.

Conclusions

This present study indicated that the effects of addition of N and hydrothermal conditions on soil microbial respiration, qCO₂, and concentrations of labile C and N depended on types of tree leaf litters and the development of litter decomposition. The results highlight the importance of N availability and hydrothermal conditions in interactively regulating soil microbial respiration and microbial C utilization during litter decomposition under forest ecosystems.

     

Optimization of arsenic and pentachlorophenol removal from soil using an experimental design methodology

Purpose

In this study, a soil-washing process was investigated for arsenic (As) and pentachlorophenol (PCP) removal from polluted soils. This research first evaluates the use of chemical reagents (HCl, HNO₃, H₂SO₄, lactic acid, NaOH, KOH, Ca(OH)₂, and ethanol) for the leaching of As and PCP from polluted soils.

Materials and methods

A Box–Behnken experimental design was used to optimize the main operating parameters for soil washing. A laboratory-scale leaching process was applied to treat four soils polluted with both organic ([PCP] _i ?=?2.5–30 mg kg^?1) and inorganic ([As] _i ?=?50–250 mg kg^?1, [Cr] _i ?=?35–220 mg kg^?1, and [Cu] _i ?=?80–350 mg kg^?1) compounds.

Results and discussion

Removals of 72–89, 43–62, 52–68, and 64–98 % were obtained for As, Cr, Cu, and PCP, respectively, using the optimized operating conditions ([NaOH]?=?1 N, [cocamidopropylbetaine] _i ?=?2 % w w^?1, t?=?2 h, T?=?80 °C, and PD?=?10 %).

Conclusions

The use of NaOH, in combination with the surfactant, is efficient in reducing both organic and inorganic pollutants from soils with different levels of contamination.     

Assessing the potential of using biochar in mine rehabilitation under elevated atmospheric CO<Subscript>2</Subscript> concentration

Purpose

Re-establishment of soil nitrogen (N) capital is a priority in mine rehabilitation. We aimed to evaluate the effects of biochar addition on improving mine spoil N pools and the influence of elevated CO₂ concentration on mine rehabilitation.

Materials and methods

We assessed the effects of pinewood biochar, produced at three temperatures (650, 750 and 850 °C, referred as B₆₅₀, B₇₅₀ and B₈₅₀, respectively), on mine spoil total N concentrations with five different plant species, including a tree species (Eucalyptus crebra), N-fixing shrubs (Acacia floribunda and Allocasuarina littoralis) and C₃ and C₄ grasses (Austrodanthonia tenuior and Themeda australis) incubated at ambient (400 μL L^?1) and elevated (700 μL L^?1) atmospheric CO₂ concentrations, as well as the effects of elevated CO₂ on mine rehabilitation.

Results and discussion

Soil total N significantly improved following biochar incorporation under all plant species (P < 0.05) except for T. Australis. E. crebra had the highest soil total N (0.197%, 0.198% and 0.212% for B₆₅₀, B₇₅₀ and B₈₅₀, respectively). Different from the negligible influence of elevated CO₂ on soil properties under the grasses and the N-fixing shrubs, elevated CO₂ significantly increased soil water and hot water extractable organic C (WEOC and HWEOC, respectively) and decreased total C under E. crebra, indicating that the nutrient demands were not met.

Conclusions

Biochar addition showed the potential in mine rehabilitation in terms of improving soil N pool, especially with E. crebra. However, it would be more difficulty to rehabilitate mine spoils in future with the rising atmospheric CO₂ concentration.

     

Carbon Dioxide Emission from Black Soil as Influenced by Land‐Use Change and Long‐Term Fertilization

Land‐use change and soil management play a vital role in influencing losses of soil carbon (C) by respiration. The aim of this experiment was to examine the impact of natural vegetation restoration and long‐term fertilization on the seasonal pattern of soil respiration and cumulative carbon dioxide (CO₂) emission from a black soil of northeast China. Soil respiration rate fluctuated greatly during the growing season in grassland (GL), ranging from 278 to 1030 mg CO₂ m^?2 h^?1 with an average of 606 mg CO₂ m^?2 h^?1. By contrast, soil CO₂ emission did not change in bareland (BL) as much as in GL. For cropland (CL), including three treatments [CK (no fertilizer application), nitrogen, phosphorus and potassium application (NPK), and NPK together with organic manure (OM)], soil CO₂ emission gradually increased with the growth of maize after seedling with an increasing order of CK < NPM < OM, reaching a maximum on 17 August and declining thereafter. A highly significant exponential correlation was observed between soil temperature and soil CO₂ emission for GL during the late growing season (from 3 August to 28 September) with Q₁₀ = 2.46, which accounted for approximately 75% of emission variability. However, no correlation was found between the two parameters for BL and CL. Seasonal CO₂ emission from rhizosphere soil changed in line with the overall soil respiration, which averaged 184, 407, and 584 mg CO₂ m^?2 h^?1, with peaks at 614, 1260, and 1770 mg CO₂ m^?2 h^?1 for CK, NPK, and OM, respectively. SOM‐derived CO₂ emission of root free‐soil, including basal soil respiration and plant residue–derived microbial decomposition, averaged 132, 132, and 136 mg CO₂ m^?2 h^?1, respectively, showing no difference for the three CL treatments. Cumulative soil CO₂ emissions decreased in the order OM > GL > NPK > CK > BL. The cumulative rhizosphere‐derived CO₂ emissions during the growing season of maize in cropland accounted for about 67, 74, and 80% of the overall CO₂ emissions for CK, NPK, and OM, respectively. Cumulative CO₂ emissions were found to significantly correlate with SOC stocks (r = 0.92, n = 5, P < 0.05) as well as with SOC concentration (r = 0.97, n = 5, P < 0.01). We concluded that natural vegetation restoration and long‐term application of organic manure substantially increased C sequestration into soil rather than C losses for the black soil. These results are of great significance to properly manage black soil as a large C pool in northeast China.     

Increases in soil CO<Subscript>2</Subscript> and N<Subscript>2</Subscript>O emissions with warming depend on plant species in restored alpine meadows of Wugong Mountain,China

Purpose

Ecosystem restorations can impact carbon dioxide (CO₂) and nitrous oxide (N₂O) emissions which are important greenhouse gasses. Alpine meadows are degraded worldwide, but restorations are increasing. Because their soils represent large carbon (C) and nitrogen (N) pools, they may produce significant amounts of CO₂ and N₂O depending on the plant species used in restorations. In addition, warming and N deposition may impact soil CO₂ and N₂O emissions from restored meadows.

Materials and methods

We collected soils from degraded meadows and plots restored using three different plant species at Wugong Mountain (Jiangxi, China). We measured CO₂ and N₂O emissions when soils were incubated at different temperatures (15, 25 or 35 °C) and levels of N addition (control vs. 4 g m^?2) to understand their responses to warming and N deposition.

Results and discussion

Dissolved organic C was higher in restored plots (especially with Fimbristylis dichotoma) compared to non-restored bare soils, and their soil inorganic N was lower. CO₂ emission rates were increased by vegetation restorations, decreased by N deposition, and increased by warming. CO₂ emission rates were similar for the three grass species at 15 and 25 °C, but they were lower with Miscanthus floridulus at 35 °C. Soils from F. dichotoma and Carex chinensis plots had higher N₂O emissions than degraded or M. floridulus plots, especially at 25 °C.

Conclusions

These results show that the effects of restorations on soil greenhouse gas emissions depended on plant species. In addition, these differences varied with temperature suggesting that future climate should be considered when choosing plant species in restorations to predict soil CO₂ and N₂O emissions and global warming potential.

     

Evaluation of genetic diversity in a Camelina sativa (L.) Crantz collection using microsatellite markers and biochemical traits

A genomic DNA library enriched with GA/TC repeats from Camelina sativa variety Calena has been analysed. After sequencing of about 200 randomly selected clones, approximately 60 % of them showed to contain simple or compound microsatellites with a high number of repeats. Among all microsatellite markers analysed 15 primer pairs amplified polymorphic fragments. Forty C. sativa accessions of different origin were genotyped with 15 microsatellite markers that generated 134 alleles with an average of 8.93 alleles per locus. The observed heterozygosity (Ho) among the accessions ranged from 0.0 to 0.15 with an average of 0.0370, whereas the average of expected heterozygosity (He) among accessions was 0.2769. The analysis of the average total heterozygosity (H_T = 0.651), the intrapopulation genetic diversity (H_S = 0.260), the interpopulation genetic diversity (D_ST = 0.391) and the coefficient of genetic differentiation among populations (G_ST = 0.574) demonstrated that 57.4 % of the genetic diversity is among the accessions, while 42.6 % resides within them. Phylogenetic tree of the 40 C. sativa accessions was constructed based on Nei’s genetic distance. The unweighted pair group method with arithmetic mean (UPGMA) dendrogram shows, except for CAM108 and CAM170, a clear discrimination among C. sativa accessions grouping them in five subgroups. ANOVA analysis indicates significant differences in some biochemical and agronomic parameters among the C. sativa accessions grouped according to Nei’s genetic distance. The result of the Tukey HSD test demonstrated that the A4 subgroup showed a significant higher TWS and linoleic acid (LA) content, while the subgroup A1 showed a significant higher linolenic and lower LA content compared to the remaining groups.     

Effect of Rice Residues on Carbon Dioxide and Nitrous Oxide Emissions from a Paddy Soil of Subtropical China

A pot incubation experiment with rice residues (straw and root) was conducted under aerobic condition (60% of WHC, water holding capacity) for a period of 55 days in a greenhouse. The emissions of carbon dioxide (CO₂) and nitrous oxide (N₂O) were determined by the closed chamber method in a paddy soil. The soil was derived from quaternary red clay, and collected from the Ecological Station of Red Soil, the Chinese Academy of Sciences, located in Jiangxi Province, a subtropical region of China. The emissions of CO₂ and N₂O were increased by the amendment of rice residues. Significantly positive correlation was found between N₂O and CO₂ fluxes (R = 0.650*?0.870*, P ≤ 0.05). The cumulative emissions during the early stage of the incubation (<25 days after residue addition) accounted for about 67%–86% and 67%–80% of the total amount of CO₂ and N₂O emissions, respectively. Cumulative emissions and emission factors of the two gases were higher in the soils amended with rice straw than those with rice root. The two gas fluxes were positively correlated with microbial biomass C and N, as well as soluble organic C. N₂O flux was positively correlated with NH₄ ⁺–N content at the early stage (<25 days), and negatively with NO₃ ^?–N content at the later stage of this incubation (25–55 days), implying that both nitrification and denitrification may have contributed to N₂O production.     

High Zn concentration does not impair biomass,cutting radial growth,and photosynthetic activity traits in <Emphasis Type="Italic">Populus alba</Emphasis> L.

Purpose

Evaluate the efficiency of Populus alba clone Villafranca in the uptake and translocation of Zn from contaminated soils.

Materials and methods

The effects of 48 days of zinc treatment (Zn _t ) on the growth and the photosynthetic activities of P. alba L. clone Villafranca were studied using ZnSO₄ (375 ppm per unit of soil dry weight) added in sand and peat moss substrate at the beginning of the treatment (T ₀) and again after 30 days (T ₁) in order to reach a target Zn concentration of 375 ppm at T ₀ and 750 ppm at T ₁ per unit of soil dry weight.

Results and discussion

Zn uptake in the different organs was analyzed after 30 (T ₁) and 48 days (T ₂) from the beginning of treatment, showing the following order: root ? leaves ≥ woody cutting = stem. The leaf area increased by 12 % in comparison to control plants at the end of second treatment (48 days). Cutting radial growth showed a high synchronicity in the growth rate fluctuation among control and Zn _t plants, but a higher increase in radial diameter of Zn _t cutting was observed starting from day 38 (after 8 days of second Zn _t ) reaching after 48 days 38 % higher than control plants.

Conclusions

Although our data of leaf Zn concentration were in the range usually reported as toxic for plants, Villafranca clone in Zn _t substrate were unaffected in terms of net CO₂ assimilation and stomatal conductance to water vapor.

     

An evaluation of a microbial inoculum in promoting organic C decomposition in a paddy soil following straw incorporation

Purpose

Impacts of a commercially available decay-facilitating microbial inoculum on carbon (C) and nitrogen (N) mineralization were evaluated during decomposition of rice straw in a paddy soil.

Materials and methods

Two incubation experiments were conducted for 105 days with a typical low-yield high-clay soil in central China to monitor effects of straw and the inoculum on CO₂ evolution, as well as dissolved organic C (DOC), NH₄ ⁺, NO₃ ^?, and pH under conditions of 15 °C 70 %, 25 °C 40 %, 25 °C 70 %, 25 °C 100 %, and 35 °C 70 % of water-holding capacity (WHC) with adequate N, supplied as urea or manure, respectively.

Results and discussion

Treatments of 25 °C 70 % WHC, 25 °C 100 % WHC, and 35 °C 70 % WHC generally achieved significant higher CO₂ evolution while treatment of 25 °C 40 % WHC had least. This was more evident with added manure compared to urea (P?<?0.05). The inoculum generally increased the decomposition of C inputs and the largest increases were in the initial 28 day in treatments 25 °C 70 % WHC, 25 °C 100 % WHC, and 35 °C 70 % WHC; only the 25 °C 40 % WHC actually immobilized C. The CO₂ release rates were positively correlated with DOC, but with different slopes within treatments. Despite equivalent N application rates, manure treatments had significantly less N (including NO₃ ^?, NH₄ ⁺, and total dissolved N) than those with urea. Incubation of 25 °C 40 % WHC decreased soil pH the least, probably due to relative low moisture causing delayed nitrification.

Conclusions

The results implied that the inoculum, especially fungi, would adjust to edaphic and N fertilization in regulating organic C mineralization, during which water potential would exhibit a great role in regulating substrate and nutrient availability.

     

Effects of Low-Level Aqueous Hydrogen Sulfide and Other Sulfur Species on Lettuce (Lactuca sativa) Seed Germination

Low concentrations of aqueous hydrogen sulfide (H₂S) can stimulate growth of some crops. However, it is not clear whether H₂S provides crops with only sulfur and whether other sulfur compounds have similar beneficial effects. Therefore, impacts of solutions of sodium sulfate (Na₂SO₄), sodium sulfite (Na₂SO₃), sodium sulfide (Na₂S), ferrous sulfide (FeS), and H₂S at 0.01–1 mM were assessed on 5-day lettuce seed germination. Results showed that 0.01 mM H₂S solution significantly increased lettuce shoot elongation by 40 percent (to 43.6 mm from 31.0 mm in the control), whereas 0.1 mM increased elongation by 24 percent to 38.5 mm. Only a slight 10 percent increase was observed in 0.1 mM Na₂SO₄, suggesting that ameliorative impact of H₂S on plant growth was not a result of providing sulfur nutrient. Other sulfur solutions, however, inhibited lettuce germination and elongation to varying extents, hinting that H₂S might work as a signal molecule in regulating plant cellular activities.