Genetic variation in F<Subscript>2</Subscript> populations and their potential in the improvement of grain yield in tef (<Emphasis Type="Italic">Eragrostis tef</Emphasis>)

Tef is a staple cereal of Ethiopia in high demand by consumers. In order to cope up with this high consumer demand, productivity per unit of land must increase through the development and use of high-yielding varieties. To this effect, the National Tef Research Project has long been striving towards the development of high yielding varieties through direct selection from germplasm and concentrating favourable alleles through hybridization and selection, despite the tedious crossing technique. The objective of this study was to assess the degree of genetic variation in F₂ populations of tef as a basis for improving grain yield. F₂ populations from 12 crosses and their parents were grown at the Debre Zeit Agricultural Research Center, Ethiopia, and assessment was made on eight traits on individual plant basis. Eleven of the 12 crosses showed substantial genetic variation for grain yield and its components, indicating the potential for improvement through selection. Moreover, grain yield, plant weight and yield related traits showed moderate to high heritability values (17–80%). In all the crosses, tiller number, panicle weight, yield per panicle and panicle length showed significant (P ≤ 0.05) and positive association with grain yield. Considering the degree of genetic variation and heritability values, emphasis should be given to selected crosses in an effort to developing high-yielding tef varieties.     

Combining ability analysis and association of yield and yield components among selected cowpea lines

The study was carried out to determine combining ability and association of yield and yield components among crosses derived from seven selected cowpea (Vigna unguiculata (L.) Walp) parents. Twenty-one hybrids were generated from diallel crosses excluding reciprocals. Hybrids along with seven parents were studied for combining ability and phenotypic correlations for seed yield and eight yield components. The result indicated that the general combining ability (gca) and specific combining ability (sca) were significant for most characters indicating the importance of both additive and non-additive genetic components. Additive gene action was important for eight characters except pod number, whereas non-additive gene action was not important for nodule number and grain yield. Parental lines IT86D-716 and IT81D-985 were found to be good general combiners for grain yield and other traits. The most promising specific combiners for yield and yield components were from crosses including IT87D-697-2 × IT86D-716, IT88D-867-11 × IT86D-716, IT93K-624 × IT87D-697-2, and IT87D-697-2 × IT92KD-405-1. Significant positive phenotypic correlations were observed between seed yield with pod length (POL), number of pods per plant (PON), and number of seeds per pod (SPD). POL, pod number per plant, SPD, and grain yield were identified as the best selection criteria that could be used in cowpea breeding programs.     

Genetic variability and interrelationship of traits in the industrial oil crop Vernonia galamensis

Vernonia galamensis is a wild plant from the family Asteraceae which is endemic to East Africa and has the potential to become a new oil crop for industrial uses. Its seed oil is rich in vernolic acid, a fatty acid of high interest for oleochemical applications. However, a breeding program for Vernonia galamensis cultivars with high seed and oil yields requires knowledge about the genetic variability of traits that influence seed and oil production. This study was undertaken to examine phenotypic and genotypic variability, broad-sense heritability, genetic advance under selection and interrelationships of agronomic and seed quality traits. A total of 122 Vernonia accessions, 115 collected from different regions of Ethiopia and seven introduced, were grown at two locations in Ethiopia (Alemaya and Babile), in 2001/2002 and were analyzed for 20 traits including phenology, yield, yield components, and seed quality with special emphasis on fatty acid composition. The collections exhibited significant variation for all traits except for days to emergence. Genotypes and locations interacted significantly (P 0.01) for all traits. Broad-sense heritability estimates ranged from 11% (for days to emergence) up to 79% (for days to maturity). Expected genetic advance was between 1.3% (for days to emergence) and 44.8% (for seed oil yield). Genetic correlation analysis revealed that seed yield per plant is highly and positively correlated with seed weight and head number; highly significant and negative correlations (r = –0.59, –0.82, –0.85, and –0.89) were found between vernolic acid and palmitic, stearic, oleic, and linoleic acid, respectively. Highly significant positive correlations (r = 0.55, 0.44, and 0.36) were observed between vernolic acid and oil content, meal protein content and seed oil yield, respectively. Path-coefficient analysis indicated seed weight and secondary head number to be the most important components of seed yield per plant. Vernolic acid, oleic acid and linoleic acid had positive direct effects and stearic acid had a negative direct effect on oil content. The direct positive effect of oleic acid on oil content was, however, compensated by the negative indirect effects of stearic and vernolic acid resulting in a negative correlation (r = –0.60) between oleic acid and oil content. These observations will support the selection of accessions with high seed and oil yield, high meal protein contents, and high vernolic acid content.     

Variance components and heritabilities of yield and agronomic traits among cowpea genotypes

The phenotypic expression and heritability of quantitative traits vary due to genotypic differences, environmental influences and genotype by environment interactions. The objective of this study was to determine variance components and heritabilities of seed yield and its components in cowpea. Field experiments were conducted at three locations, three planting dates using ten diverse cowpea genotypes during 2004/2005. The experiments were laid out in the randomized complete block design with three replications. Results indicated significant interactions (P ≤ 0.01) among genotypes, locations and planting dates. The genotypic variance contributed ≥50% of the total phenotypic variance for the numbers of days to 50% flowering, seeds per pod, productive branches per plant and seed yield. The heritabilities of the numbers of days to 50% flowering were estimated at 50%, pods per plant (23%), days to maturity (66%), productive branches per plant (53%), 100 seed weight (11%) and seed yield (55%). The presence of considerable degree of genotypic variance among tested genotypes under various environments suggests that success in cowpea breeding could possibly be achieved through direct phenotypic selection.     

Quantitative trait loci mapping and epistatic analysis for grain yield and yield components using molecular markers with an elite maize hybrid

Summary The aim of this investigation was to map quantitative trait loci (QTL) associated with grain yield and yield components in maize and to analyze the role of epistasis in controlling these traits. An F_2:3 population from an elite hybrid (Zong3 × 87-1) was used to evaluate grain yield and yield components in two locations (Wuhan and Xiangfan, China) using a randomized complete-block design. The mapping population included 266 F_2:3 family lines. A genetic linkage map containing 150 simple sequence repeats and 24 restriction fragment length polymorphism markers was constructed, spanning a total of 2531.6 cM with an average interval of 14.5 cM. A logarithm-of-odds threshold of 2.8 was used as the criterion to confirm the presence of one QTL after 1000 permutations. Twenty-nine QTL were detected for four yield traits, with 11 of them detected simultaneously in both locations. Single QTL contribution to phenotypic variations ranged from 3.7% to 16.8%. Additive, partial dominance, dominance, and overdominance effects were all identified for investigated traits. A greater proportion of overdominance effects was always observed for traits that exhibited higher levels of heterosis. At the P ≤ 0.005 level with 1000 random permutations, 175 and 315 significant digenic interactions were detected in two locations for four yield traits using all possible locus pairs of molecular markers. Twenty-four significant digenic interactions were simultaneously detected for four yield traits at both locations. All three possible digenic interaction types were observed for investigated traits. Each of the interactions accounted for only a small proportion of the phenotypic variation, with an average of 4.0% for single interaction. Most interactions (74.9%) occurred among marker loci, in which significant effects were not detected by single-locus analysis. Some QTL (52.2%) detected by single-locus analysis were involved in epistatic interactions. These results demonstrate that digenic interactions at the two-locus level might play an important role in the genetic basis of maize heterosis.     

Seed yield and its components in smooth bromegrass (Bromus inermis Leyss.) cultivars

Summary Seed yield performance and effect on seed yield of morphological traits such as seeds/panicle, seed weight, seeds/branch, branches/2nd node, branches/panicle, fertile tillers/plant and panicle length were evaluated in 13 cultivars of smooth bromegrass in a spaced-plant nursery. Wide variation was observed between and within cultivars for seed yield and traits. Highly significant correlation coefficients were found among traits and seed yield. Path analysis showed that specifically seeds/panicle and seed weight had strong direct effect on seed yield. It was concluded that seeds/panicle and seed weight were primary selection criteria for seed yield in smooth bromegrass.     

Variation for dry matter yield,seed yield and other agronomic traits in Ladino white clover landraces and natural populations

Summary A set of Ladino white clover ecotypes including the last available landraces and some natural populations collected from old permanent meadows, together with some white clover varieties of various origins, were evaluated as monocultures for dry matter (DM) and seed yield assessed in separate field experiments. Other agronomic traits were also recorded. The best performing variety, Espanso, was significantly outyielded by some ecotypes for DM and seed production. Compared to landraces, natural populations yielded on average far less seed but as much DM and tended towards higher persistence indicating that domestication of the native Ladino at the farm level only improved seed yield of the crop. Natural populations showed, besides lower values of most seed yield components, a distinct canopy architecture characterized by smaller leaves, longer internodes and denser stolons. Seed weight proved the best character discriminating between the two ecotype groups. Significant variation for most traits was found both among landraces, in which it was mostly relatable to differences among provenances, and among natural populations. The relations between the main multivariate patterns of phenotypic variation and a set of environment collecting variables suggested that evolutive adaptation to different agronomic practices was a major determinant of the overall variation found in landraces. Evidence is provided that a relevant part of the variation observed among ecotypes for some important traits could be genetic.Abbreviations DM dry matter - DMY dry matter yield - NRH number of ripe heads - NFH number of florets per head - PL petiole length - LS leaf size - IL internode length - NS number of stolons - PRO protein content - SY seed yield - TSW thousand seed weight - NSF number of seeds per floret - PCA principal components analysis - PC principal component     

Molecular markers for yield components in Brassica juncea – do these assist in breeding for high seed yield?

A population of 112 F₁-derived doubled haploid lines was produced from a reciprocal cross of Brassica juncea. The parents differed for seed quality, seed color and many agronomic traits. A detailed RFLP linkage map of this population, comprising 316 loci, had been constructed, and was used to map quantitative trait loci (QTL) for seed yield and yield components, viz. siliqua length, number of seeds per siliqua, number of siliques per main raceme and 1000-seed weight. Stable and significant QTLs were identified for all these yield components except seed yield. For yield components, a selection index based on combined phenotypic and molecular data (QTL effects) could double up the efficiency of selection compared to the expected genetic advance by phenotypic selection. Selection indices for high seed yield, based on the phenotypic data of yield and yield components, could only improve the efficiency of selection by 4% of the genetic advance that can be expected from direct phenotypic selection for yield alone. Inclusion of molecular data together with the phenotypic data of yield components in the selection indices did not improve the efficiency of selection for higher seed yield. This is probably due to often negative relationships among the yield components. Most of the QTLs for yield components were compensating each other, probably due to linkage, pleiotropy or developmentally induced relationships among them. The breeding strategy for B. juncea and challenges to marker assisted selection are discussed.     

Combining ability of seed vigor and seed yield in soybean

Studies have shown no consensus in relationships between seed yield and vigor in soybean [Glycine max (L.) Merrill]. The lack of information regarding the inheritance of seed vigor prompted this study to determine the types of gene action and combining ability estimates for seed vigor and its related traits. Five high and six low seed vigor soybean genotypes were crossed in a diallel, and selfed to produce 55 F₂ progenies, which were examined, along with the parents, for seed vigor, yield, and seed weight. Significant genotype and environment effects were found for seed vigor and yield. General combining ability (GCA) effects for seed vigor and seed yield were significant (p≤ 0.01) and larger than specific combining ability (SCA) effects. Significant GCA and SCA effects were found for seed weight, indicating that both additive and non additive genetic effects were involved in conditioning seed weight. The ratios of mean square, 2GCA / (2GCA+SCA), were 0.96 for seed vigor and 0.93 for seed yield. These ratios indicated that additive gene effects were more important than non additive gene effects for seed vigor and seed yield in these crosses. Mean seed vigor(83.8%), as determined by accelerated aging germination, and mean seed yield (2,155 kg ha^-1)in high vigor × high vigor crosses were higher than the high vigor × low vigor and low vigor × low vigor crosses. Mean percent accelerated aging germination rates in F₂ populations from diallel crosses were significantly related to mid-parent seed vigor(r² = 0.52^**) and midparent seed size (r² = 0.31^**). These results indicated that levels of seed vigor can be improved through breeding, while maintaining high yields because of the predominance of GCA effects in both seed vigor and seed yield. This revised version was published online in July 2006 with corrections to the Cover Date.     

Comparative efficiency of honeycomb and conventional pedigree methods of selection for yield and fiber quality in cotton (Gossypium spp.)

The effectiveness of honeycomb pedigree selection (HPS) as compared to conventional pedigree selection (CPS) was studied in one intraspecific (G. hirsutum L. × G. hirsutum L.) cross population (population I) and one interspecific (G. hirsutum L. × G. barbadense L.) cross population (population II). Combined selection for yield and lint quality traits was applied for four cycles at two locations for population I and atone location for population II. Finally, the best F₆ lines derived by each method, together with the unselected population derived by single seed descent (SSD) and three check cultivars, were tested in comparative experiments, separately for each cross, at the same locations. In both populations the analysis of variance indicated significant differences among the groups of the material tested for seed cotton yield, mean boll weight, micronaire reading, staple length, and uniformity ratio. No significant differences were found with respect to plant height, lint percentage, and fiber strength in population I and with respect to lint percentage and fiber strength in population II. In population I, on the basis of mean seed cottonyield and number of superior lines derived by each method as compared to the check varieties and the unselected SSD population, HPS-lines were superior to CPS-lines for seedcotton yield, fiber length and boll weight. HPS-lines, however, did not differ significantly in seedcotton yield from the best check cultivar Eva. Finally, the material derived by CPS was earlier in maturity than the material derived by HPS and SSD. Also in population II, on the basis of mean seedcotton yield and number of superior lines derived by each method as compared to the unselected SSD population, HPS-lines were superior to CPS-lines. No significant differences, however, were identified between the material of the two methods for lint quality traits. It was concluded that in both populations HPS was more effective than CPS in identifying lines with high yielding ability and good lint quality. This superiority of HPS is attributed, at least partially, to its effectiveness in early generation selection. This revised version was published online in August 2006 with corrections to the Cover Date.     

Combining ability for seed yield traits of Chenopodium quinoa breeding lines

For a better understanding of the inheritance of seed yield traits in Quinoa (Chenopodium quinoa) Willd., a half-diallelic crossing experiment with six diverse but uniform breeding lines was conducted. True hybrid plants were detected by means of differences in panicle colour in 14 out of the 15 crosses performed. The agronomic performance of 14 F₂ populations and six parental lines was evaluated in field trials on fertile clay soil. General and specific combining ability of the lines (GCA and SCA) were estimated. Highly significant differences in GCA effects were found between the lines for plant height at maturity, early flowering, early maturity, seed yield and thousand seed weight. Significant SCA effects were only found for plant height at maturity. However, SCA effects were rather small and accounted for 7% of the total variance. The finding of large GCA effects and low SCA effects suggests that best selection results could be expected from crosses between the agronomic best performing genotypes. This revised version was published online in August 2006 with corrections to the Cover Date.     

Improving adaptation to drought stress in white pea bean (Phaseolus vulgaris L.): Genotypic effects on grain yield,yield components and pod harvest index

Common bean (Phaseolus vulgaris L.) is the most important food legume crop in Africa and Latin America where rainfall pattern is unpredictable. The objectives were to identify better yielding common bean lines with good canning quality under drought, and to identify traits that could be used as selection criteria for evaluating drought‐tolerant genotypes. In all, 35 advanced lines were developed through single seed descent and evaluated with a standard check under drought and irrigated conditions at two locations over 2 years in Ethiopia. Grain yield (GY), pod number per m², seed number per m² and seed weight decreased by 56%, 47%, 49% and 14%, respectively, under drought stress. Eight genotypes had better yield with good canning quality under drought compared to the check. Moderate to high proportion of genetic effects were observed under drought conditions for GY and yield components compared to genotype × environment effects. Significant positive correlations between GY and pod harvest index (PHI) in drought suggest that PHI could be used as an indirect selection criterion for common bean improvement.     

Response of a new IR50/Moroberekan recombinant inbred population of rice (Oryza sativa L.) from an indica × japonica cross for growth and yield traits under aerobic conditions

Genetic variability, correlation, path coefficient analysis and test of normality was conducted in an F₈ recombinant inbred aerobic rice population developed by single seed descent method to evaluate its potential as a mapping population. Estimates of genotypic variance, phenotypic variance, genotypic coefficient of variance (GCV), phenotypic coefficient of variance (PCV), heritability in the broad sense (H) and expected genetic advance at 5% selection index (GA) for grain yield and other attributing characters were computed. In all the cases, PCV was higher than GCV indicating the influence of environment on the characters. High heritability coupled with high GA was observed for several plant traits; number of tillers, plant height, total number of spikelets panicle⁻¹, biomass plant⁻¹, straw weight, harvest index and grain yield plant⁻¹ and hence offered good scope for selection. Grain yield plant⁻¹ was found to be positively correlated with plant height, number of tillers, panicle length, panicle exsertion, number of panicles plant⁻¹, single panicle weight, test weight, number of fertile spikelets panicle⁻¹, straw weight, biomass plant⁻¹, harvest index and grain breadth both at genotypic and phenotypic levels. Harvest index exerted maximum positive direct effect, followed by biomass plant⁻¹ and straw weight on grain yield plant⁻¹ at phenotypic level. Shapiro-Wilks “W test of normality” indicated that the population was skewed towards female parent IR50 for some traits and for some others towards Moroberekan, the male parent. Most of the characters that showed skewness were platykurtic with a kurtosis value of less than 3.     

Correlation and path coefficients analysis for reproductive traits in Guinea grass

Summary Correlation and path coefficients were calculated for seed yield per plant and its components from 36 clones comprising 8 parental and their 28 single cross clones in Guinea grass (Panicum maximum Jacq.) from data pooled over two years. Seed yield per plant showed significant positive correlation coefficients with branch number per panicle, panicle number per plant, panicle length, branch length, 100 seed weight and day to flower. Path coefficients analysis revealed that panicle number per plant had highest direct effect on seed yield per plant, followed by branch number per panicle, days to flower and 100 seed weight.     

Molecular mapping of quantitative trait loci for plant growth, yield and yield related traits across three diverse locations in a doubled haploid rice population

A doubled haploid (DH) population of 125lines derived from IR64 × Azucena, an indica – japonica cross were grown in three different locations in India during the wet season of 1995. The parents of mapping population had diverse phenotypic values for the eleven traits observed. The DH lines exhibited considerable amount of variation for all the traits. Transgressive segregants were observed. Interval analysis with threshold LOD > 3.00 detected a total of thirty four quantitative trait loci (QTL) for eleven traits across three locations. The maximum number of twenty QTL were detected at Punjab location of North India. A total of seven QTL were identified for panicle length followed by six QTL for plant height. Eight QTL were identified on three chromosomes which were common across locations. A maximum of seven QTL were identified for panicle length with the peak LOD score of 6.01 and variance of 26.80%. The major QTL for plant height was located on Chromosome 1 with peak LOD score of 16.06 flanked by RZ730-RZ801 markers. Plant height had the maximum number of common QTL across environment at the same marker interval. One QTL was identified for grain yield per plant and four QTL for thousand grain weight. Clustering of QTL for different traits at the same marker intervals was observed for plant height, panicle exsertion, panicle number, panicle length and biomass production. This suggests that pleiotropism and or tight linkage of different traits could be the plausible reason for the congruence of several QTL. Common QTL identified across locations and environment provide an excellent opportunity for selecting stable chromosomal regions contributing to yield and yield components to develop QTL introgressed lines that can be deployed in rice breeding program. This revised version was published online in July 2006 with corrections to the Cover Date.     

Morphological variation in Astragalus hamosus L. and Coronilla scorpioides L. populations of Tunisia

Morphological variation between Astragalus hamosus and Coronillascorpioides populations was studied using local germoplasm collected in northern and central Tunisia. Twenty-one morphological traits were recorded and data were analysed using complementary statistical analysis. Considerable variation based on morphological and agronomical traits was found between populations and for both species. Pod and peduncle lengths as well as flowers number were the most discriminant variables between populations. Differences were also found for variables like seed number per pod, seed yield and dry matter production. Significant correlations were found between plant traits and the environmental parameters of the origin sites. This study revealed enough variation among populations to initiate a selection programme for pasture improvement in arid and semi-arid areas of Tunisia, where the two species are well adapted. This revised version was published online in July 2006 with corrections to the Cover Date.     

Direct and indirect selection for yield in chickpea

Summary The efficiency of indirect selection for seed yield was compared with direct selection for yield per se in chickpea. A total of 2500 single F₂ plants, derived from 50 crosses with 50 plants from each cross, were divided into five sub-populations (SP1 to SP5) of 500 plants each by including 10 plants from each of the 50 crosses. The five sub-populations were advanced upto F₆ by exercising 10% selection intensity for four successive generations for number of pods per plant in SP1, number of seeds per pod in SP2, seed weight in SP3, seed yield in SP4 and random selection in SP5. The efficiency of direct and indirect selection for yield was evaluated by comparing groups of 50 F₆ lines from each sub-population. SP1 and SP3 F₆ lines showed higher mean grain yield than the other three methods. SP1 and SP3 were found to be almost equally efficient in developing F₆ lines which were significantly superior to the check. This suggests that indirect selection for yield via pod number and seed weight is more efficient than direct selection for yield.     

Heritability and genetic advance in recombinant inbred lines of tef (Eragrostis tef)

Recombinant inbred lines (RILs) of the tef cross Kaye Murri × Fesho were evaluated for nine quantitative traits at three locations in the central highlands of Ethiopia during the 1998/99 main season in order to estimate the genetic coefficient of variation (GCV), heritability and genetic advance expected from selection. Highly significant differences were obtained among the RILs for all traits studied. Grain yield, panicle weight and yield per panicle showed a relatively high GCV (12–16%). A comparatively high heritability was obtained from days to heading (31%) followed by panicle length (25%) and grain yield (23%). Moderate amounts of heritability values were obtained for panicle weight and yield per panicle. High genetic advance as percent of the mean were obtained from grain yield (16%), yield per panicle (12%) and panicle weight (10%) at5% selection intensity, which indicated the possibility of improving these traits. Several RILs were identified that have exceeded the better yielding parent at all locations. Grain yield showed a strong positive association (r = 0.26–0.70) with shoot biomass, lodging index, panicle length, plant height, panicle weight and yield per panicle. Overall, the present results showed a) the availability of genetic variance for some useful traits in the RILs for exploitation through selection, b) the existence of significant genotype × location interaction that indicated the need to test inbred populations in more environments, and c)the availability of superior inbred lines for further breeding work. This revised version was published online in August 2006 with corrections to the Cover Date.     

Recurrent selection for yield in Glycine max using genetic male-sterility

Summary Recurrent selection, using genetic male sterility to facilitate intermating in Glycine max, was evaluated when selecting among individual space-planted S₀ soybean plants for three yield-related traits: 1) seed yield per se (YLD), 2) apparent harvest index (AHI), and 3) a selection index in which seed yield was regressed on maturity (REG). The original intermating population was a combination of the cultivar Century and two F₂ populations segregating for male sterility. The selection intensity through three cycles of selection was 20%. The YLD population increased in mean yield by 2.8±2.2 g plant^-1 cycle^-1 buf shifted significantly toward late maturity by 3.9±0.6 days cycle^-1. The AHI population decreased in yield by 4.4±2.6 g cycle^-1 while maturity shifted slightly earlier; there was very little change in AHI. The REG population increased in yield by 5.7±2.4 g plant^-1 cycle^-1 while shifting toward later maturity by only 0.8±0.5 day cycle^-1. We concluded that selection among S₀ plants in these populations, using the selection index of yield regressed on maturity, was affective in increasing single plant yields without causing a significant shift in maturity. Selecting for yield per se caused an unacceptable shift toward late maturity and selection for AHI was ineffective for increasing yield or AHI.     

Environmental correlations among grain yield and other important traits of wheat in drylands

Summary Environmental correlation coefficients were computed among all pairs of five traits, namely grain yield, heading date, number of tillers per m², plant height and 1000-grain weight (grain size) using 30 Triticum durum and 30 Triticum aestivum varieties grown in 18 environments. Grain yield was significantly correlated with the other four traits in almost all of the varieties. The mean correlation coefficient over all varieties ranged from 0.58 to –0.83 for durum wheat and 0.66 to 0.88 for aestivum wheat. The correlation coefficients between heading date and the other traits were also significant, ranging from –0.45 to –0.79 in durum wheat and –0.61 to –0.85 in aestivum wheat. The correlation coefficient between number of tillers with plant height and 1000-grain weight were the smallest, 0.19–0.32 in durum wheat and 0.39–0.60 in aestivum wheat. It was concluded that agronomic practices favouring early and good stand establishment in the dry regions will favour the yield components and important adaptive traits, which contribute towards larger yields. Significant differences were found among genotypes in the environmental correlation coefficients and the associated changes in one trait as a result of changes in other traits.