Genetic variation, heritability and progeny testing in meadow bromegrass

Meadow bromegrass is a recently introduced pasture grass in western Canada. Its leafy production and rapid regrowth have made it a major grass species for pasturing beef animals in this region. Because relatively little breeding work has been done on this species, there is little information on its breeding behaviour. The main objective of this study was to estimate genetic parameters and assess breeding methodologies for meadow bromegrass. Forty half‐sib (polycross and open‐pollinated) and full‐sib (selfed) progenies were evaluated for dry matter and seed yield, fertility index, harvest index, plant height, plant spread, crude protein, neutral detergent fibre and acid detergent fibre. Genetic variation for seed yield, harvest index, and plant height was significant in the open‐pollinated and selfed tests. Genetic variation estimates for dry matter yield were negative (polycross), not significant (open‐pollinated), or significant (selfed). Estimates of genetic variation for quality traits were not significant, except for acid detergent fibre (selfed). Correlations among characters indicated that it is possible to simultaneously improve seed and forage yield. Rankings of progenies by the half‐sib tests for forage and seed yield were not altered by the use of the synthetic parental value (SV_i), which includes information from selfed progeny. The polycross progeny test did not discriminate parents as well as the open‐pollinated and selfed tests; this may have been a result of non‐random pollination in the polycross. Correlation among the progeny tests, showed that open‐pollinated and selfed progeny tests agreed for all characters, except for harvest index, while correlation between polycross and selfed tests were significant for six characters but not dry matter yield, and acid and neutral detergent fibres. The most dissimilar tests were polycross and open‐pollinated, with significant correlations found only for fertility index, height, spread and neutral detergent fibre. It was concluded that there was significant variation and moderate heritability for most traits in the meadow bromegrass populations evaluated, and that the open‐pollinated progeny test is the method of choice for selecting parents for synthetics of this species.     

Random amplified polymorphic DNA variation within and among meadow bromegrass progeny types

Ten meadow bromegrass genotypes tested as half‐sib (polycross, PX; open‐pollinated, OP) and selfed (S₁) progenies were surveyed using random amplified polymorphic DNA. Fourteen primers, which produced 32 markers, were selected to determine the genotypes of 360 individuals from the three progeny tests. Analysis of molecular variance was performed in each progeny test, and genetic distances between genotypes and progeny types were determined. Among genotype genetic variation in half‐sib (PX and OP) progenies was similar. Genetic variation among genotypes for S₁ progenies (30.5%) was about twice that found in the half‐sib progenies. Variation between individual S₁ progenies ranged from 15.7% to 50.1%, while in the half‐sib progenies, the range was 6.9‐24.1%. Based on average distances between progeny types for a given genotype, OP and PX were closer to each other than to the S₁. An analysis of variance of the molecular marker frequency occurrence was performed for 12 plants within each progeny type of each genotype. Marker frequencies, expressed in percentages, ranged from 10.7% to 84.3%. No significant differences were found for genotype and progeny type‐genotype interaction suggesting that all genotypes behave in a similar manner across the different progeny types.     

Quantitative trait loci mapping of forage stover quality traits in six mapping populations derived from European elite maize germplasm

Four forage maize stover quality traits were analysed including in vitro digestibility of organic matter (IVDOM), neutral detergent fibre (NDF), water‐soluble carbohydrates (WSC) and digestibility of NDF (DNDF). We mapped quantitative trait loci (QTL) in three DH (doubled haploid) populations (totally 250–720 DH lines): one RIL population (358 lines) and two testcross (TC) populations, based on field phenotyping at multiple locations and years for each. High phenotypic and genotypic correlations were found for all traits and significant (p < .01) at two locations, and NDF was negatively correlated with the other traits. QTL analyses were conducted by composite interval mapping. A total of 33, 23, 32 and 25 QTL were identified for IVDOM, NDF, WSC and DNDF, respectively, with three, four, five and two major QTL for each. Few consistent QTL for IVDOM, WSC and DNDF were detected in more than two populations. This study contributed to the identification of key QTL associated with forage maize digestibility traits and is beneficial for marker‐assisted breeding and fine mapping of candidate genes associated with forage maize quality.     

Genetic variation, heritability and genetic correlations for forage quality and yield traits of Mediterranean tall fescue germplasm

Higher ruminant intake potential and in vivo digestibility as indicated by lower neutral and acid detergent fibre (NDF and ADF), respectively, and higher crude protein (CP), may be valuable targets in tall fescue breeding. Some 105 full‐sib families from a diallel cross of Mediterranean parent germplasm were grown in a heated greenhouse simulating the temperature pattern of a Mediterranean environment, to estimate genetic parameters for NDF, ADF, CP and dry matter (DM) yield in one autumn and one winter harvest. Family x harvest interaction was large for NDF and ADF, moderate for CP and absent for DM yield. Additive genetic variance was mostly larger than specific genetic variance, and tended to be small for quality traits and large for DM yield. Narrow‐sense heritability was low for CP and ADF in autumn and moderate to fairly high in the remaining cases. Predicted gains per selection cycle never exceeded 5% for quality traits while being greater than 10% for DM yield. An inverse genetic correlation between DM yield and any quality trait emerged in the presence of sizeable genetic variation.     

Evaluation of environments for preliminary testing of maize for yield and stover digestibility

Summary The identification of environments suitable for selection should enable plant breeders to test reliably a larger number of genotypes with given resources. This research was undertaken to evaluate discrimination ability (DA) and prediction ability (PA) of eight environments involving two locations. Eckartsweier (Eck) 1 and Voelkenrode (Voe); 2 yer. 1984 (84) and 1985 (85); and two harvests, silage harvest (I) and later (II). It was based on dry matter yield of plant (PDMY), ear (EDMY) and stover (SDMY) and on in vitro digestible organic matter (IVDOM), neutral detergent fibre (NDF), acid detergent fibre (ADF) and acid detergent lignin (ADL) of stover of 12 inbred lines and their 66 diallel crosses in maize (Zea mays L.). Linear regression coefficient of the performance of genotypes in an environment on that averaged across all environments and its degree of determination were used as measures of the DA and PA of environments, respectively. In hybrids, the DA of environments differed significantly for all traits except SDMY and ADL. Environment Eck851 showed better PA (0.63) than other environments for PDMY, EDMY, IVDOM, NDF, and ADF. Among the 12 two-environment combinations. EckI was a better predictor for PDMY, EDMY, IVDOM and NDF (PA0.80). The more productive environments showed better DA and PA for PDMY and FDMY than less productive ones. For IVDOM and NDF the first harvest provided better discrimination and prediction than the second harvest. In inbred lines the DA of environments differed significantly for EDMY only. In the present study, PA and DA seemed to be functions of the environments, PA was improved by combining two environments, and some environments seemed to be suitable for preliminary selection of genotypes for such diverse traits as yield and digestibility.     

Near infrared reflectance spectroscopy analysis of digestibility traits of maize stover

Summary Near infrared reflectance spectroscopy (NIRS) is emerging as a potentially useful tool in breeding plants for quality traits. Information is lacking, however, on its use in forage maize (Zea mays L.). The objectives of the present investigation were to evaluate the prediction of digestibility traits of maize stover using NIRS technique and to study the effect of laboratory (Lab) and NIRS assays on the estimates of variation and covariation. Twelve inbred lines, 66 diallel crosses among them and eight hybrid checks were evaluated at silage and grain harvests for 2 years at two agro-climatically diverse locations in the Federal Republic of Germany. Standard methods were used for Lab analysis of in vitro digestible organic matter (IVDOM), neutral detergent fibre (NDF), acid detergent fibre (ADF) and acid detergent lignin (ADL). In NIRS evaluation, calibration equations were developed by modified stepwise regression. The standard error of calibration was 2.5, 1.7, 1.4 and 0.4 for IVDOM, NDF, ADF and ADL, respectively. The coefficient of multiple determination was high (0.9) except for ADL. The validation statistics (standard error and correlation coefficient) were similar. In the diallel crosses, the estimates of variation (heritabilities in broad and narrow sense, genotypic and error coefficients of variation), generally, did not vary appreciably and consistently in the comparisons between Lab and NIRS methods particulary at silage harvest. Simple and rank correlations between Lab and NIRS analyses were positive and significant. These correlation coefficients based on the mean performance of the diallel crosses at silage harvest were >0.9 and at least 16 hybrids were common between the two analyses, among the upper one-third or lower one-third (22) hybrids. The study showed that NIRS analysis should be useful in maize breeding programmes wherein a large number of genotypes need to be evaluated.Abbreviations NIRS near infrared reflectance spectroscopy - Lab laboratory - IVDOM in vitro digestible organic matter - NDF neutral detergent fibre - ADF acid detergent fibre - ADL acid detergent lignin - SEC standard error of calibration - SEV standard error of validation - SD standard deviation - r simple correlation coefficient - r_s rank correlation coefficient - R² coefficient of multiple determination - h_b ² heritability in broad sense - h_n ² heritability in narrow sense - CV_g genotypic coefficient of variation - CV_e error coefficient of variation - GCA general combining ability effect     

Evaluation of Fibre Flax (Linum usitatissimum L.) Performance under Minimal and Zero Tillage in Eastern Canada

The feasibility of producing fibre flax in minimum tillage or zero tillage (ZT) systems was investigated. The results were variable between the sites, which differed in soil type and previous cropping history. Tillage regime had no impact on fibre flax phenological development including number of days to emergence, days to flowering and days to harvest at either site. However, tillage regime had a significant effect on mean stem diameter, dry matter content and plant height at all three sampling dates at the sandy loam site, and a significant effect on mid‐season plant height at the clay site. At the sandy loam site, ZT plots had the highest populations of plants with the finest stem diameters, the lowest branching ratios, but the shortest plants by the end of the season. Overall, plant densities were greater, stem diameters thinner, and biomass production higher in the heavier soil of the clay site. These results indicate that under the growing conditions present in 1998, fibre flax can successfully be grown in minimum or ZT systems on different soil types in Eastern Canada. Moreover, the growth of fibre flax in these systems does not compromise the proportion of tall plants having thin stems and minimal branching, a critical quality parameter for fibre flax production.     

Doubled-haploid versus single-seed descent and S1-family variation for testcross performance in a maize population

Progress made in the in situ gynogenesis technique since 1990 now allows production of a high number of maize (Zea mays L.) doubled-haploid (DH) lines. The aim of the study was to compare DH lines versus selfing lines for testcross performance. DH and single-seed descent (SSD) lines were produced from random S₁ progenies of a broad-base population. For grain yield, kernel moisture, plant height, ear height and leaf length, the three population means were similar. Except for kernel moisture, the genetic variance of DH lines was nearly twice as high as the genetic variance of S₁ families, as expected. On the other hand, genetic variance among SSD lines was only 1.5 times higher than the genetic variance of S₁ families. This lower variance could be due to a selection bias in the method of production of SSD lines. However, for all traits, heritability of SSD or DH lines was higher than heritability of S₁ families. Epistasis effects in DH progenies were not significant. The consequence was a high correlation between S₁ testcross progenies and DH or SSD testcross progenies, meaning that the S₁ testcross value can be used to select the best families from which DH lines will be extracted. As a whole, the observed variation in DH lines appeared to be more in accordance with the observed variation among S₁ families than with the observed variation among SSD lines.     

QTL mapping for agronomic and fibre traits using two interspecific chromosome substitution lines of Upland cotton

CS‐B14Sh and CS‐B22Sh are cotton interspecific chromosome substitution (CS)‐B lines, in which a pair of short arms of chromosome 14 and chromosome 22 were introgressed from Gossypium barbadense doubled‐haploid line 3‐79 with the background of Gossypium hirsutum line TM‐1, respectively. These two CS‐B lines were crossed with TM‐1, and segregating progenies (F₂ and F_2:3, respectively) were obtained. Phenotypic data of lint yield, yield‐related traits and fibre‐quality traits were collected from two trials. In the cross CS‐B14SH X TM‐1, QTL for boll weight (BW), lint percentage (LP), fibre upper half mean length (UHML), micronaire reading (MIC), and fibre breaking tensile strength (STR) were repeatedly detected. Alleles from 3‐79 decreased BW and MIC, but increased UHML and STR. In the cross CS‐B22Sh X TM‐1, QTL for BW, LP, UHML, MIC, STR, fibre elongation (EL),seed weight(SW), node of first fruiting branch (NFB) and fibre uniformity index (UI) were repeatedly detected, and alleles from 3‐79 decreased UHML, UI and STR, but increased NFB, SW, MIC and EL. QTL clusters were found in both populations.     

Morphological variation of starch granules in S<Subscript>1</Subscript> cassava progenies

The need to develop new cassava (Manihot esculenta Crantz) varieties with different starch characteristics has greatly motivated new research. The aim of this study was to evaluate morphological alterations in starch granules as well as genetic gains in segregating S₁ cassava populations. Starch from accessions (S₀): BGM0222, BGM1378 and BGM1662 and from their self-fertilized progenies (S₁): F0222, F1378 and F1662, with 78, 80 and 76 individuals, respectively, were evaluated for the following traits: area (ArStGr, µm²), perimeter (PrStGr, µm), length (LeStGr, µm) and number of starch granules (NuStGr). Moreover, some agronomic traits of the S₁ progenies were evaluated at harvest such as: plant height (PlaHei), shoot yield (ShoYi), root yield (RoYi), starch yield (StYi), and root dry matter content (DMC). With the selection of transgressive individuals in S₁ progenies, it is possible to obtain selection gains for values higher and lower than the average of the S₀ genitors, whereas selection gains can reach up to 16.58, 8.39, 7.87 and 34.18% for ArStGr, LeStGr, PrStGr, and NuStGr, respectively. Average size of the starch granule varied from 9.8 to 12.37 µm among individuals in an S₁ progeny. Positive and high correlations between the individuals were found for some morphological characteristics of the cassava starch granule but not strongly correlated with agronomic traits. Therefore, it is possible to select S₁ cassava individuals for agronomic characteristics without losing other important starch traits. Cassava-segregating populations allow the obtainment of individuals with different morphological characteristics as for starch granules, enabling obtainment of genetic gains with the selection.     

Genetic association of within‐boll yield components and boll morphological traits with fibre properties in upland cotton (Gossypium hirsutum L.)

Knowledge of genetic relationships between within‐boll yield components and fibre quality is essential for simultaneous improvement of lint yield and fibre quality in upland cotton (Gossypium hirsutum L.). Nine parents and their F₁ progeny with reciprocals from a 3 × 6 factorial mating design were grown in 2008 and 2009. Seven within‐boll yield components and two boll morphological traits and the three fibre quality parameters were analysed based on a conditional additive/dominance (AD) genetic model. Results showed that boll length contributed to the largest proportion of phenotypic, additive and dominance variances for UHM length; seed index contributed to the largest proportion of phenotypic and additive variances for fibre strength; boll width made the largest contribution to phenotypic and additive variances and the second largest contribution to dominance‐by‐environment interaction variance for micronaire, indicating that they played an important role than the other traits for fibre length, strength and fineness/maturity, respectively. It is worthy of note that those correlations between boll shape and fibre quality apply only to the nine parents and the resultant hybrids in this study and do not imply a cause and effect relationship.     

Study of Cotton Fibre Traits Inheritance under Different Temperature Regimes

Genetic behaviour of fibre quality parameters under heat‐stressed conditions clearly reflected the significant effect of heat stress on the phenotypic expression of fibre quality parameters. Results from the field experiments demonstrated that fibre quality was better among the upland cotton cultivars under non‐stressed (June) regime. Fibre length, strength, uniformity and fineness were substantially high under June regime when compared with that under April (heat stressed) regime. The prevalence of significant genotype × temperature regime interaction for fibre length, fineness and strength provided another evidence for the influence of temperature regimes on the expression of fibre traits. A significant effect of heat stress on the phenotypic expression of fibre quality parameters was observed.     

Comparison of European Fibre Flax (Linum usitatissimum) Cultivars under Eastern Canadian Growing Conditions

Renewed interest in natural fibres, decreasing subsidies to European producers, and high production costs have led the move to reintroduce fibre flax (Linum usitatissimum L.) production into eastern Canada. Research was conducted at the Macdonald Campus of McGill University, Québec, Canada in 1998 and 1999 and at Winchester and Kemptville, Ontario, Canada in 1998, to assess the performance of seven European fibre flax cultivars. Parameters evaluated included plant density, branching ratio, stem diameter, fresh and dry biomass, and mean harvest height. Data from all sites and years were subjected to a pooled anova where appropriate. The cultivar main effect was detected for all parameters measured, with the exception of mean fresh weight and mean height at harvest. There was also a site main effect for all parameters except for branching ratio. A cultivar–site interaction was found for all parameters except for mean stem diameter and mean dry weight. Results indicate a strong potential for producing fibre flax in eastern Canada using currently available European cultivars.     

Response to selection for plant height in X-ray treated population of jute (Corchorus capsularis L.) cv. JRC 212

Summary X irradiation of dry seeds of Corchorus capsularis L. cv. JRC 212 induced variations in plant height as evidenced by the high values of genotypic variance and heritability estimate in M₃ generation. Selection on the basis of line mean of plant height in M₃ generation was effective in increasing plant height as well as fibre yield in M₃ generation. A higher response for plant height rather than for fibre yield itself was observed in lower irradiation dose while responses for these two traits were almost similar in higher dose. An average of 12% increase in fibre yield was achieved in M₆ generation when all top five lines were selected. The top two lines, had 17% and 16% higher fibre yield than that of control.     

Genetical analysis of resistance to Mycosphaerella pinodes in pea seedlings

Summary In studies of the inheritance of resistance, pea seedlings of seven lines in which stems and leaves were both resistant to Mycosphaerella pinodes were crossed with a line in which they were both susceptible. With seven of the crosses resistance was dominant to susceptibility. When F₂ progenies of five crosses were inoculated on either stems or leaves independently, phenotypes segregated in a ratio of 3 resistant: 1 susceptible indicating that a single dominant gene controlled resistance. F₂ progenies of one other cross gave ratios with a better fit to 9 resistant: 7 susceptible indicating that two co-dominant genes controlled resistance. The F₂ progeny of another cross segregated in complex ratios indicating multigene resistance.When resistant lines JI 97 and JI 1089 were crossed with a susceptible line and leaves and stems of each F₂ plant were inoculated, resistance phenotypes segregated independently demonstrating that leaf and stem resistance were controlled by different genes. In two experiments where the F₂ progeny of the cross JI 97×JI 1089 were tested for stem and leaf resistance separately, both characters segregated in a ratio of 15 resistant:1 susceptible indicating that these two resistant lines contain two non-allelic genes for stem resistance (designated Rmp1 and Rmp2) and two for leaf resistance (designated Rmp3 and Rmp4). Evidence that the gene for leaf resistance in JI 1089 is located in linkage group 4 of Pisum sativum is presented.     

Comparison of Progeny-Testing Methods in Lolium perenne L.

From 22 genotypes, selfed (S₁) and testcross progenies were investigated. The latter were generated by i) polycross (PX) and ii) 2 topcrosscs (TC) using cms-inbred lines as a tester. Progenies were tested for annual dry matter yield in 3 successive years, the 3-year average was 76.7 dt/ha for S, and 76.9, 80.1 and 74.5 for PX, TC 1 and TC 2, respectively. Genetic variance was highest for S₁ (20.42), while the average of the 3 tcstcrosses was 12.22. However, the genotype-year interaction variance of S, Was 52.21, being 2–3 times greater than for the 2 topcrosscs. PX progenies were the most stable across years. Predicted response to selection was highest for S₁ (10.4 %). Genetic correlation (r_g) between S₁ and the testcrosses was highest with TC 2 (r_g= 0.5931⁴⁴).     

Combining ability estimates for yield and fibre quality traits in 4 × 13 line × tester crosses of Gossypium hirsutum

The aim of this study was to estimate the general combining ability of the parents and specific combining ability of hybrids considered for the development of high yielding and better quality cultivars. Seventeen genotypes and 52 F₁ hybrids obtained by crossing 4 lines and 13 testers in line × tester mating system during 2003 were sown in randomized complete block design in 2004. Line × Tester analysis revealed significant GCA and SCA effects for all the traits except fibre elongation. Preponderance of non-additive gene action was obtained for seed cotton yield per␣plant and majority of its component traits including fibre traits. Among the parents: PIL-8 for days to 50% flowering, CCH-526612 for boll weight, CITH-77 for number of open bolls per plant and CNH-36 for seed cotton yield per plant were detected with higher general combining ability. Parent, CCH-526612 for 2.5% span length, fibre strength and fibre elongation and AKH-9618 for micronaire value, fibre strength and fibre elongation were good combiners for fibre quality traits. The F₁s achieved high seed cotton yield by producing more number of open bolls. The high yielding hybrids with acceptable fibre quality traits were: CISV-24 × LH-1995, H-1242 × PIL-8 and RS-2283 × SGNR-2 deducted with significant SCA effects for seed cotton yield and fibre characteristics; 2.5% span length and fibre strength. These cross combinations involved at least one parent with high or average GCA effect for a particular trait.     

The measurements of acid detergent fibre in rapeseed by visible and near-infrared spectroscopy

Visible and near‐infrared spectroscopy (NIRS) calibrations for acid detergent fibre (ADF) in intact rapeseed (Brassica napus L.) were performed for two different sample volumes (10 ml, 500 seeds approximately; and 1 ml, 50 seeds approximately). The inclusion of brown and yellow‐seeded cultivars in this work has allowed the whole range of ADF currently described in the literature for this character to be covered. Chemometric techniques have been used for developing calibration equations for both procedures when measuring the two different seed sample volumes. On the basis of the coefficient of determination in the cross‐validation (R²cv) obtained for the 10 and 1 ml assays (0.80 and 0.73), and SECV/SEL ratios (2.30 and 2.57), respectively, both equations showed an accuracy sufficient for screening purposes in an ADF range from 6.80 to 13.46% dry wt, which is presented in this work.     

Linkage map construction and mapping QTL for cotton fibre quality using SRAP, SSR and RAPD

Tetraploid cotton is one of the most extensively cultivated species. Two tetraploid species, Gossypium hirsutum L. and G. barbadense L., dominate the world's cotton production. To better understand the genetic basis of cotton fibre traits for the improvement of fibre quality, a genetic linkage map of tetraploid cotton was constructed using sequence‐related amplified polymorphisms (SRAPs), simple sequence repeats (SSRs) and random amplified polymorphic DNAs (RAPDs). A total of 238 SRAP primer combinations, 368 SSR primer pairs and 600 RAPD primers were used to screen polymorphisms between G. hirsutum cv. Handan208 and G. barbadense cv. Pima90 which revealed 749 polymorphic loci in total (205 SSRs, 107 RAPDs and 437 SRAPs). Sixty‐nine F₂ progeny from the interspecific cross of ‘Handan208’בPima90’ were genotyped with the 749 polymorphic markers. A total of 566 loci were assembled into 41 linkage groups with at least three loci in each group. Twenty‐eight linkage groups were assigned to corresponding chromosomes by SSR markers with known chromosome locations. The map covered 5141.8 cM with a mean interlocus space of 9.08 cM. A × test for significance of deviations from the expected ratio (1: 2: 1 or 3: 1) identified 135 loci (18.0%) with skewed segregation, most of which had an excess of maternal parental alleles. In total, 13 QTL associated with fibre traits were detected, among which two QTL were for fibre strength, four for fibre length and seven for micronaire value. These QTL were on nine linkage groups explaining 16.18‐28.92% of the trait variation. Six QTL were located in the A subgenome, six QTL in the D subgenome and one QTL in an unassigned linkage group. There were three QTL for micronaire value clustered on LG1, which would be very useful for improving this trait by molecular marker‐assisted selection.     

谷子各器官干物质量分配与产量的相关性分析

为了明确谷子各器官干物质量分配情况及其与产量的关系,本研究以6个比较有代表性的品种为研究对象,对其单株干物质量、收获指数、各器官干物质分配情况和产量的差异进行了比较研究。结果显示:不同品种谷子各器官干物质量分配规律基本一致,即穗比例>茎比例>叶比例>叶鞘比例抑根比例。杂交种‘长杂谷466’(CZ466)收获指数、单穗重和产量均是最大,株高较低;常规种‘长生13’(CS13)株高最低,产量及收获指数较高。所有品种谷子穗干物质量与单株总干物质量均显著正相关;叶鞘干物质量与穗干物质量均呈显著正相关。综上表明CZ466和CS13是2个产量高、株高矮、收获指数高的优良品种;推断谷子叶鞘和单株总干物质量与产量有较密切的相关性,其他器官干物质量与产量的相关性因品种而异。