Factors influencing diamine oxidase activity and γ-aminobutyric acid content of fava bean (Vicia faba L.) during germination

Factors (germination time, spectra, temperature, pH, and chemical inhibitors) influencing diamine oxidase (DAO, EC 1.4.3.6) activity and γ-aminobutyric acid (GABA) content of fava bean (Vicia faba L.) during germination were investigated in this study. DAO activity significantly increased in germinating seeds but varied with different organs. The enzyme activity was higher in shoot than that in cotyledon, hypocotyl, and radicle. When seeds were germinated in the dark, DAO activity was 2.35-, 2.00-, 2.36-, 4.40-, and 1.67-fold of that under white, red, blue, green, and yellow spectra, respectively. The optimum germination temperature and pH value for increasing DAO activity were 30 °C and 3.0, respectively. The DAO activity was inhibited significantly by aminoguanidine and sodium ethylenediamine tetracetate, while it was activated by CuCl(2) and CaCl(2). Germinating at an appropriate temperature and pH, 30% of GABA formation was supplied by DAO. Calcium was related to the regulation of DAO activity and GABA accumulation.     

Genetic erosion and in situ conservation of Lima bean (Phaseolus lunatus L.) landraces in its Mesoamerican diversity center

Lima bean (Phaseolus lunatus L.) is an important crop in traditional Mayan agriculture of the Yucatan Peninsula, Mexico, its Mesoamerican center of diversity. Genetic erosion in this species is currently a threat in this region out of 3 of 21 landraces dominate 71.24% of the cultivated area, and 12 are rare landraces grown only in 6.29%. Using 90 ISSR loci, we estimated the diversity and genetic relationships for 21 landraces to analyzing their risk of genetic erosion, and generate data for their in situ conservation. Total genetic diversity was high (h = 0.29), however it was lower than wild gene pool reported (h = 0.69). The abundant landraces had genetic diversity values lower (h = 0.13, I = 0.17) than the common (h = 0.26, I = 0.33) and rare landraces (h = 0.24, I = 0.27). However, the rare landraces are in a higher risk of genetic erosion due to local extinction. The cluster analysis showed no groups corresponding to morpho-phenological characteristics, geographic origin or traditional classification, which resulted from high inter-landraces gene flow levels. The molecular data confirmed that the domesticated Lima bean pool of the Yucatan Peninsula has a high risk of genetic erosion. If current tendencies in landrace cultivation continue, many will no longer be planted within two to three generations, with a consequent loss of their alleles. Programs urgently need to be established for in situ conservation of Lima bean landraces in this region.     

Nitrogen deficiency induced a decrease in grain yield related to photosynthetic characteristics,carbon–nitrogen balance and nitrogen use efficiency in proso millet (Panicum miliaceum L.)

ABSTRACT

Field experiments involving proso millet (Panicum miliaceum L.) cultivar under four nitrogen (N) levels (N0, N60, N105 and N150) were conducted in 2015 and 2016 to explore the decrease in grain yield under N deficiency related to the changes in leaf photosynthetic characteristics, carbon (C)–N balance and N use efficiency. Results showed that N deficiency decreased the net photosynthesis rate, stomatal conductance, transpiration rate and chlorophyll content and increased the intercellular CO₂ concentration of proso millet flag leaves from flowering to maturity. N deficiency negatively regulated the C–N balance and increased the C/N ratio by reducing the total N, soluble protein and soluble sugar contents, resulting in high starch content. N uptake and utilisation were significantly reduced because of less available N. Significantly positive correlations were observed between the grain yield and photosynthetic characteristics or N use efficiency, whereas a negative correlation was found between the grain yield and the C/N ratio. The yields generated by N0, N60 and N105 were lower than that of N150 in both years. The N fertiliser regression formulae developed in the study would provide useful information about the N fertiliser rate of proso millet.     

Effect of nitrogen and sulphur fertilizers and seed inoculation with rhizobium phaseoli on the nitrogen‐sulphur relationships of bean (phaseolus vulgaris L.)

A greenhouse experiment with beans (Phaseolus vulgaris L.) was performed in order to investigate the effect of nitrogen and sulphur application and seed inoculation on the yield, leaf area, distribution of different nitrogen and sulphur fractions and N/S ratio in shoot, fruit and root.

Inoculation of plants together with nitrogen or sulphur application produces an increase in the concentration of total nitrogen and a decrease in the accumulation of nitrate‐nitrogen and sulphate‐sulphur in shoot, fruit and root. Leaf area increased more with nitrogen than with sulphur application while the highest amounts of fruit dry matter were obtained with sulphur application.

N: S ratios obtained were different according to the part of the plant tested. Sulphur fertilization decreased the N: S ratios in shoot, fruit and root. The data obtained indicate that and adequate N: S ratio can insure maximum production of yield.     

Do earthworms (D. veneta) influence plant-available water in technogenic soil-like substrate from bricks and compost?

Purpose

Topsoil and peat are often taken from intact rural ecosystems to supply the urban demand for fertile soils and soil-like substrates. One way of reducing this exploitation is to recycle suitable urban wastes to produce Technosols and technogenic soil-like substrates. In this study, we investigate the role earthworms can play in impacting the hydraulic properties of such a soil-like substrate.

Materials and methods

In a 4-month microcosm experiment, the influence of the earthworm species D. veneta on the hydraulic properties of brick-compost mixture was examined. Of the ten boxes filled with ca. 11 dm³ of ground bricks (0.7 cm³ cm^?3) and green waste compost (0.3 cm³ cm^?3), five contained earthworms (W-boxes) and the remaining five were used as controls (C-boxes). The substrate was periodically irrigated and the weight of the boxes and of the drained water was monitored. At the same time, images were taken from the front of the boxes to quantify the activity of the earthworms by image analysis and soil aggregation was studied with micrographs. Before and after the experiment, water retention curves were determined from disturbed samples of the substrate using the simplified evaporation method.

Results and discussion

After 6 weeks, differences between the C- and the W-boxes were evident. Micrographs showed brick-compost aggregates only for the substrates processed by earthworms. The earthworm activity leads to reduced evaporation and an increased water content in the respective microcosms. The effect persists even after disturbing the substrate. The proportion of plant-available soil water is about 0.02 cm³ cm^?3 higher for the substrate processed by earthworms (0.250 ± 0.009 cm³ cm^?3) compared with the control (0.230 ± 0.008 cm³ cm^?3).

Conclusions

This study shows that earthworms are capable of ingesting and processing crushed bricks together with compost. The earthworms produced aggregates which persisted after disturbance and had a positive influence on the water retention capacity of such a soil-like substrate constructed from waste.

     

Accumulation mechanism of γ-aminobutyric acid in tomatoes (Solanum lycopersicum L.) under low O2 with and without CO2

The storage of ripe tomatoes in low-O(2) conditions with and without CO(2) promotes γ-aminobutyric acid (GABA) accumulation. The activities of glutamate decarboxylase (GAD) and α-ketoglutarate-dependent GABA transaminase (GABA-TK) were higher and lower, respectively, following storage under hypoxic (2.4 or 3.5% O(2)) or adjusted aerobic (11% O(2)) conditions compared to the activities in air for 7 days at 25 °C. GAD activity was consistent with the expression level of mRNA for GAD. The GABA concentration in tomatoes stored under hypoxic conditions and adjusted aerobic conditions was 60-90% higher than that when they are stored in air on the same day. These results demonstrate that upregulation of GAD activity and downregulation of GABA-TK activity cause GABA accumulation in tomatoes stored under low-O(2) conditions. Meanwhile, the effect of CO(2) on GABA accumulation is probably minimal.     

Does moder development along a pure beech (Fagus sylvatica L.) chronosequence result from changes in litter production or in decomposition rates?

The development of temperate deciduous and conifers forests stands usually results in accumulation of forest floor organic matter and a shift from mull to moder humus forms. It has been suggested that an increase in nutrient uptake by trees during their rapid growth phase leads to topsoil acidification, decrease in earthworm density and thereby a decrease in litter turnover. The focus of this paper was to examine if the mull-moder shift with forest ageing results from higher leaf litter production and/or lower litter decay rates. The objectives of this research were to determine (1) changes in macro-morphological properties of humus forms, leaf litter production, litter decay rates, soil nutrients content and pH along a 130-year pure beech (Fagus sylvatica L.) chronosequence in Normandy (Northwest France), (2) if humus form varied from mull to moder with increasing stand age, and (3) if a shift from mull to moder resulted from increased litter production, decreased litter decay rates, or both. Annual litter production did not change significantly along the chronosequence (mean 2.41 t ha⁻¹). In contrast, litter decay rates decreased significantly during the rapid growth phase of trees. In consequence, the litter turnover time (1/k) was lower in the youngest stands (20 months) compared to the oldest ones (31 months). Even in the absence of a significant pattern of variation, litter production was positively correlated with the thickness of the OF (Oi) horizon. In contrast, litter decay was strongly negatively correlated with maximum thickness of the OH (Oa) horizon, suggesting that the appearance of the humification layer was mainly due to a decrease in litter decay rate. We did not find significant changes in the main properties of the organo-mineral horizon, suggesting that soil nutrient availability may not directly affect litter dynamics. We concluded that moder development along the chronosequence resulted in decreasing litter decay rates during the aggradation phase while litter production was stable. Further studies are required to identify the ecological factors responsible for moder development along forest ageing.     

Rhizobia in tropical legumes—IX. pot and field trials with inoculants for Psophocarpus tetragonolobus (L.) DC.

Antigenically identifiable inoculants for Psophocarpus tetragonolobus were evaluated in three non-sterile soils contained in pots (sandy-clay, Renggam series; a loamy-sand, Sungei Buloh series; silty-clay, Munchong series). Most-probable-numbers of indigenous rhizobia ranged from 4 (Renggam series) to 13 (Munchong series) g^?1. Only two (RRIM 56 and 968) of the eight rhizobia tested formed > 50% of the nodules in all soils. Recovery of two strains (RRIM 968 and UMKL 12) was significantly poorer from the Munchong series soil which had the most indigenous rhizobia and the highest silt plus clay content. In a field trial using a Sungei Buloh series soil containing 700 rhizobia g^?1 capable of nodulating P. tetragonolobus, none of the applied strains formed > 18% of the nodules; two formed no nodules. There were no significant increases in plant yield in response to inoculation in the field trial and in two soils in the pot trials. In Sungei Buloh series soil, RRIM 56 formed 90% of the nodules when the indigenous rhizobia were 5 cells g^?, and 14% when the population was 700 g^?1. This raises the question of the need to inoculate seed sown into soils with high indigenous rhizobial populations, but there was some indication of increasing representation of inoculant strains in nodules with time.     

Rapeseed (Brassica napus L.) biofortification with selenium: How do sulphate and phosphate influence the efficiency of selenate application into soil?

ABSTRACT

The connection between sulphur (S) and selenium (Se) metabolism makes rapeseed (Brassica napus) an attractive candidate for Se fortification. Unfortunately, fertilizers may interfere with the availability of selenate (SeO₄^2-) in numerous ways, including both soil and physiological processes. Experiments on two agricultural soils amended with SeO₄^2- (32 μg Se kg^?1 soil), sulphate and phosphate (each at three levels of supply) were established to elucidate the effect of these anions on the selenization efficiency. Maximal efficiency in Chernozem soil was roughly two-fold higher (455 μg Se kg^?1 seed) than in Cambisol. Sulphate significantly decreased (up to 28%) the seed Se contents in Cambisol, while an enhancement (up to 33%) was found in Chernozem. In the Chernozem, the induction of collective S and Se translocation toward the seed more than compensated for any competition effects due to the highest sulphate supply. In Cambisol, plant Se distribution did not follow that of S as closely as in Chernozem. Phosphate did not significantly alter the fortification efficiency. Resistance of rapeseed proteins to protease hampered a quantitative investigation of changes in Se speciation under different S supplies. Nevertheless, protein-bound selenomethionine was the predominant Se storage form and traces of other Se species were also identified.     

Absorption of flavonols derived from sea buckthorn (Hippophaë rhamnoides L.) and their effect on emerging risk factors for cardiovascular disease in humans

Sea buckthorn (Hippopha? rhamnoides L.) is a rich source of flavonols, especially isorhamnetin. Most prospective cohort studies have indicated some degree of inverse association between flavonoid intake and coronary heart disease. Animal and human studies suggest that sea buckthorn flavonoids may scavenge free radicals, lower blood viscosity, and enhance cardiac function. The effects of flavonol aglycones derived from sea buckthorn on the risk factors of cardiovascular disease as well as their absorption were studied in humans. The flavonols, ingested with oatmeal porridge, did not have a significant effect on the levels of oxidized low-density lipoprotein, C-reactive protein, and homocysteine, on the plasma antioxidant potential, or on the paraoxonase activity. Flavonols at two dosages in oatmeal porridge were rapidly absorbed, and a relatively small amount of sea buckthorn oil added to the porridge seemed to have increased the bioavailability of sea buckthorn flavonols consumed at the higher dose.     

Nitrification and denitrification in an acidic soil of tea (Camellia sinensis L.) field estimated by δ15N values of leached nitrogen from the soil columns treated with ammonium nitrate in the presence or absence of a nitrification inhibitor and with slow-release fertilizers

Forty-two-day-old wheat (Triticum aestivum L. var. Asakazekomugi) plants were treated with complete, K-free (—K), Ca-limited (—Ca), and Mg-free (—Mg) nutrient solutions for 10 days using 2 mM NH₄NO₃ as the nitrogen source, which was replaced with 4 mM ¹⁵ NH₄C1 or Na¹⁵NO₃ for the subsequent 2 days to investigate the absorption, translocation, and assimilation of inorganic nitrogen in relation to the mineral supply. In another experiment plants were grown on NO₃ ^?, NH₄ ⁺, NH₄N0₃, and K-free and Ca-limited NH₄N0₃ nutrient solutions for 10 days, and then in the latter three treatments the nitrogen source was replaced with NO₃ ^? and half of the —K plants received K for 6 days to examine the changes in the nitrate reductase activity (NRA).

Wheat plants absorbed NH₄ ^?N and NO₃-N at a similar rate. Influence of K on the absorption of N0₃-N was stronger than that on the absorption of NH₄-N in wheat plants. The supply of K to the —K plants increased the absorption of NO₃-N, while the absorption of NH₄-N still remained at a lower rate in spite of the addition of K. A limited supply of Ca and lack of Mg in nutrient media slightly affected the absorption of NH₄-N. The influence of K was stronger on the translocation of nitrogen from roots to shoots, while Ca and Mg had little effect. When K was supplied again to the —K plants the translocation of NO₃,-N was more accelerated than that of NH₄-N. Incorporation of NH₄-N into protein was higher than that of NO₃-N in all the tissues; root, stem, and leaf. Assimilation of NH₄-N and NO₃-N decreased by the —K and —Mg treatments.

Leaf NRA of wheat plants decreased in the —K and —Ca plants. Higher leaf NRA was found when K was given again to the —K plants than when the plants were continuously grown in K-free media. Replacement of NO₃ ^? with NH₄ ⁺ as the nitrogen source caused a decline of leaf NRA, while the supply of both NH₄ ^?N and NO₃-N slightly affected the leaf NRA.     

Identification and relationships of accessions grown in the grapevine (<Emphasis Type="Italic">Vitis vinifera</Emphasis> L.) Germplasm Bank of Castilla y Léon (Spain) and the varieties authorized in the VQPRD areas of the region by SSR-marker analysis

A total of sixty-five accessions from the Spanish region of Castilla y León including those authorized in the VQPRD areas were characterized for six SSR loci. All the samples but one unknown were identified by comparison to other databases. Thirty synonymous samples and three cases of homonymy were found out, confirming in most cases ampelographic expectations. Five unique genotypes belonging to local varieties in risk of extinction were detected. Several parameters were calculated to assess the usefulness of the chosen loci in this work. A dendrogram representing the genetic similarities among the accessions was constructed using the neighbor-joining method to investigate possible parentage relationships in the sample, and to explain them from an historical and cultural point of view.     

Chemical Changes and Heavy Metal Partitioning in an Oxisol Cultivated with Maize (Zea mays, L.) after 5 Years Disposal of a Domestic and an Industrial Sewage Sludge

The need for solutions to minimize the negative environmental impacts of anthropogenic activities Fhas increased. Sewage sludge is composed of predominantly organic matter and can be used to improve soil characteristics, such as fertility. Therefore, its application in agriculture is an adequate alternative for its final disposal. However, there is a lack of information on its long-term effects on soil changes in tropical areas. Thus, the objectives of this study were to determine (i) the effect of sewage sludge application on heavy metal build-up in soil and maize grains and leaves, and (ii) the effects of soil amendment with sewage sludge on the chemical properties of a Brazilian oxisol. Besides the increasing levels of Zn, Cu, Ni, and Cr, amending soil with sewage sludge also alters the distribution of these metals by increasing the mobile Phases, which correlated significantly with the increase in metal extraction with two single extractants, Mehlich 1 and DTPA (Diethylene triamine pentaacetic acid). The levels of Fe, Mn, Zn, and Cu in maize grains and leaves increased with the type and rate of sewage sludge application. Nevertheless, metal build-up in soil and plants was within the allowed limits. Significant differences were also found in soil characteristics like humic fractionation with the applied sewage doses. The data obtained does not indicate any expressive drawbacks in the use of sewage sludge as a soil amendment, as the heavy metal concentrations observed are unlikely to cause any environmental or health problems, even overestimated loadings, and are in accordance with the Brazilian regulations on farming land biosolid disposal.     

Genetic relationships among improved varieties of rice (<Emphasis Type="Italic">Oryza sativa</Emphasis> L.) in Indonesia over the last 60 years as revealed by morphological traits and DNA markers

Morphological traits and two kinds of molecular markers were employed to study the genetic relationships among improved rice (Oryza sativa ) varieties of Indonesia since 1943. Dendrograms based on morphological traits and both molecular markers (simple sequence repeats, SSR and single nucleotide polymorphism, SNP) agreed in separating the varieties into two primary groups. Based on the morphological traits, a larger group (>60 %) contains varieties with smaller sizes compared with those in the smaller group (<40 %). SSR and SNP markers revealed that most of the varieties belonged to indica (88; 89 %) and japonica (9; 8 %) subspecies, and 3 % of varieties were not involved in two subspecies. The molecular markers revealed that the genetic diversity (H) stagnated between stage II (1967–1985) and stage III (1986–2003). However, during stage I (1943–1966), H was higher than in the other stages as revealed by SNP markers, while H in stage I was lower than in the other stages as revealed by SSR markers. In this study, the two molecular data sets were positively correlated and positive correlations between the phenotypic and molecular data depended on the kind of molecular marker: SNP had higher Mantel r values than SSRs. Besides, SSR markers seem to be appropriate for pedigree studies, while SNP markers could be used to reveal genomic relationships. These findings were attributable to the different properties of these two different markers. These results suggested that the diversity and differentiation of both the phenotypic and molecular marker variations were probably resulted from the crossing and selection in rice breeding in Indonesia. We suggest that Indonesia needs another strategy to improve new varieties to avoid a reduction in genetic diversity and similarity.     

<Emphasis Type="Italic">Chaerophyllum byzantinum</Emphasis> Boiss. and <Emphasis Type="Italic">Trachystemon orientalis</Emphasis> (L.) G. Don—recently introduced from Turkish wild flora as new crop species among other interesting findings from immigrant gardens in western Germany

In western Germany, typical gardens of immigrant families were visited and periodically checked regarding their plant composition and cultivation techniques. A preliminary inventory of the cultivated plants of the Langenberg region south of Bonn is given. Chaerophyllum byzantinum Boiss. and Trachystemon orientalis (L.) G. Don as new crops, recently introduced from the wild flora of Turkey, and their utilization are shortly described. Most gardening immigrants originate from farmers’ families and introduce local knowledge from their native countries. Personal preferences to familiar or local varieties made them transfer the respective seeds or plants and in some cases even wild plants to their new settling areas. Vicinity to German or immigrant gardeners from other nationalities allowed for exchange of seed and experience. This way, German gardens became centers of increasing diversity for horticultural crops within the past few decades.