Genetic analyses of resistance of the wheat differential cultivars Carstens V and Spaldings Prolific to two races of Puccinia striiformis

Genetic analysis of resistance of wheat seedlings to two races of Puccinia striiformis was conducted on F₁, F₂ and F₃ generations from crosses Carstens V (CV) × Lee, Spaldings Prolific (SPA) × Lee and CV × SPA. F₂ generations from crosses of CV and SPA with Strubes Dickkopf (SD) were also studied. The plants were classified into six resistance classes and analysed by factorial correspondence analysis and nonhierarchical classification. The two P. striiformis isolates tested were a French isolate of race 43E138 and a Lebanese isolate of race 2E16, selected for the differences in their virulence spectra for the common differential cultivars Strubes Dickkopf and Nord Desprez. Resistance of CV and SPA was recessive and dominant to races 43E138 and 2E16, respectively. CV possessed three or four resistance genes, one of them being expressed with both races. Two genes of CV had a cumulative effect for resistance to 43E138 and two or three gave dominant resistance to 2E16. SPA had three resistance genes, all of which gave resistance to 2E16 and two of which also gave resistance to 43E138. SPA had one gene in common with CV for resistance to both races. Furthermore, the gene for resistance to race 2E16 in CV and SPA was allelic with a gene in SD, and was probably Yr25 .     

Unravelling the Prunus/Plum pox virus interactions

Plum pox virus (PPV) belongs to the genus Potyvirus that contains the largest number of virus species infecting plants. Its virus genome has been extensively characterised and sequenced. However, few data are available on its interactions with woody host plants. We therefore focused, in the past 4 years, both on the cellular and molecular aspects of the compatible and incompatible Prunus /PPV interactions. GFP (Green fluorescent protein)-tagged PPV and in situ hybridisation were used to compare the localization of viral particles in stems and leaves of susceptible and resistant apricot cultivars. In parallel, molecular tools were developed through the cloning and characterization of polymorphic, homologous resistance genes and of candidate genes involved in the expression of Prunus /PPV interactions. Candidate genes are currently used to target genomic regions involved in resistance or susceptibility and to identify molecular markers indispensable for further marker assisted selection for resistance to sharka disease.     

Breeding for resistance: conventional breeding for Plum pox virus resistant apricots (Prunus armeniaca L.) in Greece

A large apricot breeding programme has been conducted at NAGREF-Pomology Institute, Naoussa-Greece, for the control of sharka disease, since 1989. Ten apricot cultivars of North American origin: 'Stark Early Orange', 'Stella', 'NJA2', 'Sunglo', 'Veecot', 'Harlayne', 'Henderson', 'Goldrich', 'Orangered' and 'Early Blush', selected for their resistance to the highly virulent local strain of Plum pox virus (PPV)-M (Marcus), have been used as parents in crosses with quality cultivars, mainly with the local cv. Bebecou, from 1989 to 2003. Approximately 7000 hybrids have been created. Resistance to PPV was the main criterion of selection. Most hybrids have been subjected to artificial inoculation by PPV-M and examined for symptom expression for more than five years. Indexing to GF-305, as well as laboratory diagnostic tests, have been applied. The genetic analysis showed that: (1) 50% of the hybrids inherited resistance to PPV in the families where cvs. Stark Early Orange, NJA2, Sunglo, Veecot and Harlayne were used as a parent, and (2) 100% of the hybrids inherited resistance to PPV in the families where cv. Stella was one of the parents. Resistance to PPV appears to be under simple genetic control involving one gene locus. Promising apricot selections resistant to PPV-M have been released.     

Resistance to plum pox potyvirus in apricots1

The susceptibility of 115 apricot cultivars to plum pox potyvirus (PPV) has been examined, since 1981, in the experimental plots of the Pomology Institute at Naoussa and Skydra, Makedonia (GR). Inoculation was assured by aphids, transmitting strain PPV-M (Marcus) from naturally infected trees in adjacent peach orchards. For each cultivar, four to six trees were examined for at least 4 years. Observations on symptoms were made on leaves early in May and on fruits at maturity. Most cultivars expressed severe disease symptoms. Those without symptoms were inoculated by grafting onto heavily infected old apricot trees. The grafted shoots were tested for PPV in the following year by ELISA and on the woody indicator GF305. The cultivars which were rated as resistant after artificial inoculation and ELISA came from North America: Early Orange, Stella, NJA2, Sunglo, Veecot, Harlayne, Goldrich and Henderson. Most of these have been crossed with quality cultivars for the creation of resistant hybrids. The PPV resistance of large numbers of these apricot hybrids is now under investigation.     

Linkage of Vfa4 in Malus × domestica and Malus floribunda with Vf resistance to the apple scab pathogen Venturia inaequalis

The Vf locus from Malus floribunda clone 821 is an important source of resistance to apple scab disease caused by Venturia inaequalis , and has been introduced into numerous cultivars of domesticated apple, Malus  ×  domestica . Cloning of the putative Vf locus has revealed that it contains several receptor-like Vf candidate genes. In order to determine which of these genes is most closely linked to Vf resistance, primers were designed based on conserved regions in the Vf candidate genes adjacent to a variable portion of the leucine-rich repeat (LRR) domain, to yield PCR product length polymorphisms. PCR products were obtained from 31 cultivars of M.  ×  domestica , of which 19 are known to contain Vf resistance, and from 10 selections of M. floribunda . PCR products corresponding in size to Vfa1 and Vfa2 were found in all the plants tested. However, a PCR product with 100% predicted amino acid identity to Vfa4 was found only in M.  × domestica cultivars known to have Vf scab resistance. This PCR product was also found in most, but not all, selections of M. floribunda tested, including the original source of Vf resistance, M. floribunda 821. The PCR product matching Vfa4 appears to be the most closely linked to Vf resistance and should be a valuable tool for monitoring Vf inheritance in apple.     

Epidemiology of sharka disease in Spain

PPV was first detected in Spain in 1984 in Japanese plum ( Prunus salicina Lindl) cv. Red Beaut and spread very quickly to other Japanese and European plums and apricot cultivars but left peach cultivars unaffected. In the years following the detection of PPV, the predominant aphid species visiting Prunus orchards in Mediterranean areas were Aphis gossypii followed by Aphis spiraecola , the latter being the main aphid species found at present. Both species are considered to be the main vectors of PPV in Spanish early Prunus growing areas. Spatial analysis of the spread of PPV-D in Japanese plum and apricot trees confirmed the lack of significant association between immediately adjacent trees. The observed spatial pattern of sharka suggests a lack of movement of PPV-viruliferous aphid vectors to immediately adjacent trees and indicates their preferential movement to trees several tree spaces away. PPV-D is the only type currently present in Spain, with the exception of a PPV-M outbreak that was detected in and successfully eradicated from Aragón in 2002. The short-distance spread of PPV-M infection occurred as far as 12 m along the rows of peach trees. However, PPV-D has not been observed to spread through peach cultivars, despite being grown in the vicinity of heavily infected plots of apricot or Japanese plum trees.     

Breeding for resistance to plum pox potyvirus in the Czech Republic1

Breeding for plum cultivars resistant to plum pox potyvirus (PPV) is in progress in the Czech Republic, while projects for apricot and peach have started in 1991. The aim is to create an assortment of apricot and peach cultivars for northern regions of Europe in which PPV is widely distributed.     

Evaluation of bacterial wilt resistance in tomato lines nearly isogenic for the Mi gene for resistance to root-knot

Resistance to bacterial wilt, caused by Ralstonia solanacearum , in tomato lines CRA 66 and Caraïbo is reported to be decreased by root-knot nematode galling and by introduction of the Mi gene for nematode resistance. The Mi gene is located on tomato chromosome 6, which also carries a major quantitative trait locus (QTL) for resistance to bacterial wilt. Bacterial wilt resistance was evaluated in F3-progenies derived from two crosses between near-isogenic lines, Caraïbo × Carmido and CRA 66 × Cranita, differing for small and large introgressions from Lycopersicon peruvianum that carry the Mi gene, respectively. These introgressed regions were mapped using RFLP markers. Plants homozygous Mi⁺/Mi⁺ (susceptible to the nematode) and homozygous Mi/Mi (resistant) for the Mi gene were selected in F2 and used to produce F3 progenies. Parents and F3-lines with Mi/Mi had resistance to bacterial wilt reduced by 30% in Caraïbo × Carmido and by 15% in CRA 66 × Cranita. Caraïbo and Carmido were demonstrated to be isolines and the small introgression from L. peruvianum resulted in loss of the QTL for bacterial wilt resistance, which is probably allelic or linked in repulsion to the Mi gene. In contrast, resistance to bacterial wilt segregated in the F3 lines from the cross CRA 66 × Cranita, giving families varying in resistance between the levels shown by the parents. Consequently, two hypotheses were considered: (i) after only four backcrosses, the parents were not isolines and the genes for resistance to bacterial wilt from CRA 66 were still segregating, and (ii) the parents were isolines and variation in resistance to bacterial wilt in F3 was due to recombination events among the large L. peruvianum introgressed chromosome region from Cranita.     

Genetic analysis of the resistance to eight anthracnose races in the common bean differential cultivar Kaboon

Resistance to the eight races (3, 7, 19, 31, 81, 449, 453, and 1545) of the pathogenic fungus Colletotrichum lindemuthianum (anthracnose) was evaluated in F(3) families derived from the cross between the anthracnose differential bean cultivars Kaboon and Michelite. Molecular marker analyses were carried out in the F(2) individuals in order to map and characterize the anthracnose resistance genes or gene clusters present in Kaboon. The analysis of the combined segregations indicates that the resistance present in Kaboon against these eight anthracnose races is determined by 13 different race-specific genes grouped in three clusters. One of these clusters, corresponding to locus Co-1 in linkage group (LG) 1, carries two dominant genes conferring specific resistance to races 81 and 1545, respectively, and a gene necessary (dominant complementary gene) for the specific resistance to race 31. A second cluster, corresponding to locus Co-3/9 in LG 4, carries six dominant genes conferring specific resistance to races 3, 7, 19, 449, 453, and 1545, respectively, and the second dominant complementary gene for the specific resistance to race 31. A third cluster of unknown location carries three dominant genes conferring specific resistance to races 449, 453, and 1545, respectively. This is the first time that two anthracnose resistance genes with a complementary mode of action have been mapped in common bean and their relationship with previously known Co- resistance genes established.     

Specific resistance to soybean stem canker conferred by the Rdm4 locus

The Rdm4 gene from soybean cv. Hutcheson has been extensively used to incorporate resistance to soybean stem canker (SSC), caused by Diaporthe phaseolorum var . meridionalis (Dpm), into soybean commercial cultivars. The objective of this work was to characterize the inheritance of the Rdm4 locus in different populations derived from the cross: J77-339 ( rdm / rdm , susceptible) × Hutcheson ( Rdm4 / Rdm4 , resistant) in independent interactions with two local isolates of Dpm. Four F₂ populations were obtained and two were advanced to the F₃ generation as separate F_2:3 families to perform progeny tests. Each population was inoculated with the CE109 and/or CE112 isolates of Dpm. Within each plant–pathogen interaction, the resistance gene segregated as completely dominant. However, cross resistance, or opposite disease reactions, to CE109 and CE112 isolates of Dpm were observed in four F_2:3 families, indicating an intergenic recombination event between two nonallelic genes interacting specifically with each isolate of Dpm. The distance between them, estimated as the recombination fraction, was 29%, suggesting that both genes were not tightly linked, but close enough to segregate together in most crosses. Results indicated the existence of a genomic region in cv. Hutcheson composed of race-specific resistance loci with at least two Rdm genes: the previously recognized Rdm4 and a novel gene, tentatively named Rdm5 , conferring specific resistance to Dpm isolates CE109 and CE112.     

Genetics of resistance to cotton leaf curl disease in Gossypium hirsutum

Twenty-two cotton varieties were screened for resistance to cotton leaf curl disease (CLCuD), a disease of viral origin, using three procedures: field evaluation, whitefly transmission assay and graft inoculation. Viral infection of cotton varieties was determined by visual symptom assessment as well as dot-blot and multiplex PCR diagnostic techniques. Crosses were made between the most susceptible variety (S-12) and highly resistant varieties (CP-15/2, LRA-5166 and CIM-443). All F₁ plants of these crosses were resistant, showing dominant expression of the resistance as well as the absence of extrachromosomal inheritance. The F₂ plants of the crosses CP-15/2 × S12, LRA-5166 × S-12 and CIM-443 × S12 exhibited a ratio of 13 resistant (symptomless) to three susceptible (with symptoms). Screening of the F₂ generation for virus infection by multiplex PCR further subdivided the resistant class into those exhibiting a high level of resistance (HR; PCR-negative) and those exhibiting resistance (R; symptomless, yet showing virus replication by PCR analysis). Hence, the final ratio was 3:10:3 (HR:resistant:susceptible). The F₃ progeny of susceptible F₂ plants segregated for resistance, indicating the probable presence of a suppressor gene ( S ). These findings are consistent with three genes being involved in G. hirsutum resistance to CLCuD, two for resistance ( R _1CLCuDhir and R _2CLCuDhir ) and a suppressor of resistance ( S _CLCuDhir ).     

Monogenic resistance to a new fungicide, JS399-19, in Gibberella zeae

The fungicide JS399-19 is a novel cyanoacrylate fungicide active against Gibberella zeae , and has been marketed in China for control of fusarium head blight (FHB) on wheat. Forty-three isolates sensitive to fungicide JS399-19 were collected from three commercial wheat fields in China. Forty-five isolates resistant to JS399-19, obtained from five sensitive isolates by selection for resistance to JS399-19, were selected. Three sensitivity levels were identified: sensitive (S), moderately resistant (MR) and highly resistant (HR) to JS399-19, based on a previous study. Eight isolates representing the three sensitivity-level phenotypes were randomly selected for a study on the inheritance of JS399-19 resistance by analysing the sensitivity of hybrid F₁ progeny. A nitrate-non-utilizing mutant ( nit ) was used as a genetic marker to confirm that individual perithecia were the result of outcrossing. Five crosses were assessed: S × S, S × HR, MR × HR, HR × HR and MR × S. In crosses between parents with different sensitivity levels, such as S × HR, MR × HR and MR × S, the progeny fitted a 1:1 segregation ratio of the two parental phenotypes. No segregation was observed in the crosses S × S and HR × HR. It was concluded that the MR and HR phenotypes in G. zeae were conferred by different allelic mutations within the same locus. In these isolates, resistance to JS399-19 was not affected by modifying genes or cytoplasmic components.     

Approaches to pathogen-mediated resistance breeding against plum pox potyvirus in stone-fruit trees1

In a programme for developing systems which allow the transfer of foreign genes into apricot cultivars, we have tested cotyledons of immature embryos, somatic embryos and leaf discs. Apricot plants have been transformed, and then regenerated, with Agrobacterium tumefaciens strain LBA 4404 containing various binary plasmids: pBinGUSint, carrying the marker gene β-glucuronidase (GUS), and pBinPPVm, carrying the coat-protein gene of plum pox potyvirus (PPV). The marker gene GUS was used for visual evaluation of the efficiency of the transformation system. The coat-protein gene was used in the hope of introducing coat protein-mediated resistance to one of the most important stone-fruit pathogens in Europe and the Mediterranean area.     

Breeding for resistance: breeding for resistance to Plum pox virus in Italy

Plum pox virus (PPV) resistance in apricot and peach in Italy has been researched in several Italian institutions, including the Institutes for Fruit Tree Culture and Plant Pathology in Rome, which are assessing resistance, and the Universities of Bari, Bologna and Milan, examining breeding techniques, both by cross-breeding and genetic transformation approaches. A reliable protocol for resistance assessment has been set up, in which biological indexing, ELISA and PCR techniques are used. No source of resistance has yet been found in peach. Hybridization with Prunus davidiana could be investigated given the promising results obtained within the INRA programme in France. Almost 6000 apricot seedlings from controlled crosses between resistant parents have been investigated in search of possible molecular markers, but no positive results have been obtained so far, probably due the fact that resistance to both D and M strains is sought. The transformation of cultivars has proven difficult in apricot where the regeneration step is particularly critical, while in peach a reliable regeneration protocol still remains to be set up.     

Evaluation of apricot (Prunus armeniaca L.) resistance to Apple chlorotic leaf spot virus in controlled greenhouse conditions

Apple chlorotic leaf spot virus (ACLSV) seems to be the causal agent of apricot viruela disease. This disease has become an important problem for apricot production in Spain, mainly affecting the ‘Búlida’ cultivar, although no information is available about the behaviour of other cultivars with regards to ACLSV. In this study, the behaviour of 29 apricot cultivars against ACLSV (Apr 62 isolate) was evaluated under controlled conditions in an insect-proof greenhouse. Three different rootstocks, ‘GF305’ peach, ‘Real Fino’ apricot and ‘Adesoto’ plum, were first inoculated by grafting ACLSV-infected bark and were later grafted with the apricot cultivar to be evaluated. Apricot cultivars were evaluated during three cycles of study. ACLSV was asymptomatic on the leaves of all cultivars and rootstocks, so level of susceptibility or resistance was determined by virus detection through RT-PCR. ‘GF305’ rootstock showed a greater susceptibility level than ‘Real Fino’ and ‘Adesoto’. Most of the cultivars were susceptible to ACLSV with different levels of susceptibility, and only ‘Bergeron’ and ‘Mauricio’ were resistant.     

Identification and location of Stb9, a gene for resistance to septoria tritici blotch in wheat cultivars Courtot and Tonic

This study reports the discovery of a gene for resistance to septoria tritici blotch (STB) in two spring wheat cultivars, Courtot and Tonic. The gene, named Stb9 , confers resistance to Mycosphaerella graminicola isolate IPO89011. It was mapped by quantitative trait loci (QTL) analysis using an existing map of Courtot × Chinese Spring and was located between markers Xfbb226 (3·6 cM) and XksuF1b (9 cM) on the long arm of chromosome 2B. Markers linked to Stb9 in Courtot were then shown to be linked to resistance to IPO89011 in F₃ families of Tonic × Longbow. Allelism tests in which Tonic was crossed with Courtot confirmed that Tonic has a gene for resistance to IPO89011 at or very close to the Stb9 locus. SSR markers flanking Stb9 may be used in marker-assisted selection to introgress this gene into winter cultivars or in spring wheat breeding programmes outside Europe.     

Control and monitoring: monitoring and eradication of sharka in south-east Italy over 15 years

When the first foci of sharka were discovered in Puglia region (south-east Italy) in the late 1980s, the regional agricultural authorities launched a programme for Plum pox virus (PPV) monitoring and disease eradication. The infecting virus strain was identified as PPV-D. From 1989 to 1993, a strong eradication campaign was successfully carried out involving 13 plum and 2 apricot orchards with different levels of infection. During 1994–2000, besides plum, apricot and peach, monitoring was extended to sweet cherry. At that time, surveys and testing did not reveal any new PPV focus, but the eradication of infected trees continued in a couple of orchards. In 2001–05, particular attention was paid to peach, as devastating PPV-M outbreaks had developed in other areas of the country. A new PPV focus was found in apricot, caused by PPV-Rec, which was promptly eradicated. In the following two years, surveys in the once infected orchard and surrounding peach plantings did not detect any virus spread. The endeavour has taken 15 years making this PPV monitoring and eradication programme the longest in Italy. Its overall results indicate that the fruit tree industry in Puglia region can now be regarded as essentially PPV-free.     

Characterization of pathotypes among isolates of Xanthomonas axonopodis pv. manihotis in Colombia

Cassava bacterial blight, caused by Xanthomonas axonopodis pv. manihotis ( Xam ) is a destructive disease occurring in most cassava growing-areas. Although Colombian isolates of Xam differ in DNA polymorphism and pathogenicity, no suitable host differentials have been identified to demonstrate physiological specialization. A set of 26 Xam isolates from three edaphoclimatic zones (ECZs) in Colombia was selected for inoculation on a set of 17 potential cassava differentials. Leaf inoculation and stem puncture were used in order to detect possible specific interactions between cultivars and isolates. Cultivar × isolate interaction was highly significant ( P  < 0·001) after stem inoculation, but not after leaf inoculation. The stem inoculation technique was selected as a method for resistance screening of cassava cultivars for bacterial blight resistance. A highly significant interaction was also detected when cultivar behaviour was rated as area under the disease progress curve (AUDPC) after stem inoculation. Different pathotypes were defined among the 26 isolates and differential cultivars were proposed to define the pathotypic composition of Xam populations in three ECZs in Colombia. The results should help to improve selection of sources of resistance to cassava bacterial blight.     

水稻抗病性的遗传研究Ⅰ.水稻对白叶枯病抗性的遗传

 在1983-84两年中,用赣W-2和赣S-3两白叶枯病菌株分别接种8个杂交水稻组合的亲本、F₁、F₂和F₃代的结果表明,各抗病亲本所具有的抗W-2菌株的基因数目和作用方式均与其抗S-3菌株的基因数目和作用方式相同。就对W-2或S-3菌株的单一抗性来说,早36具有2对显性抗病基因;VT34-1具有2对互补的显性抗病基因;IR26和3624-33都具有3对互补的显性抗病基因。
在VT34-1中,有1对基因既控制对W-2菌株的抗性又控制对S-3菌株的抗性,另外2对基因则分别控制对这两菌株之一的抗性。在早36中,抗W-2菌株的2个独立基因分别与抗S-3菌株的2个独立基因连锁,其配子重组值为13.3%,基因重组值为6.887%。在IR26和3624-33中,抗W-2的菌株的3个独立基因均与抗S-3菌株的3个独立基因连锁,但它们的配子重组值和基因重组值均无法估计。预料同时选择对W-2和S-3菌株的抗性非常容易。