Differential effect of arbuscular mycorrhizal fungal communities from ecosystems along management gradient on the growth of forest understorey plant species

Arbuscular mycorrhizal fungi (AMF) are important functional components of ecosystems. Although there is accumulating knowledge about AMF diversity in different ecosystems, the effect of forest management on diversity and functional characteristics of AMF communities has not been addressed. Here, we used soil inoculum representing three different AM fungal communities (from a young forest stand, an old forest stand and an arable field) in a greenhouse experiment to investigate their effect on the growth of three plant species with contrasting local distributions - Geum rivale, Trifolium pratense and Hypericum maculatum. AM fungal communities in plant roots were analysed using the terminal restriction fragment length polymorphism (T-RFLP) method. The effect of natural AMF communities from the old and young forest on the growth of studied plant species was similar. However, the AMF community from the contrasting arable ecosystems increased H. maculatum root and shoot biomass compared with forest inocula and T. pratense root biomass compared to sterile control. According to ordination analysis AMF inocula from old and young forest resulted in similar root AMF communities whilst plants grown with AM fungi from arable field hosted a different AMF community from those grown with old forest inocula. AMF richness in plant roots was not related to the origin of AMF inoculum. G. rivale hosted a significantly different AM fungal community to that of T. pratense and H. maculatum. We conclude that although the composition of AM fungal communities in intensively managed stands differed from that of old stands, the ecosystem can still offer the ‘symbiotic service’ necessary for the restoration of a characteristic old growth understorey plant community.     

Shrubs influence arbuscular mycorrhizal fungi communities in a semi-arid environment

Interactions between arbuscular mycorrhizal fungi (AMF) and plants are essential components of ecosystem functioning; however, they remain poorly known in dry ecosystems. We examined the relationship between seven shrub species and their associated AMF community in a semi-arid plant community in southern Spain. Soil characteristics and plant physiological status were measured and related to AMF community composition and genetic diversity by multivariate statistics. We found differences in AMF communities in soils under shrubs and in gaps among them, whereas no differences were detected among AMF communities colonizing roots. Soil nutrients content drove most of the spatial variations in the AMF community and genetic diversity. AMF communities were more heterogeneous in fertile islands with low nitrogen-to-phosphorus ratio and vice versa. AMF genetic diversity increased in soils limited by phosphorus and with high soil organic matter content, while AMF genetic diversity increased in roots growing in soil not limited by phosphorus. Overall, we could not find a clear link between plant performance and the associated AMF community. Our findings show that different shrub species generate islands of fertility which differ in nutrient content and, therefore, support different AMF communities, increasing AMF diversity at the landscape level.     

The influence of tillage on the structure of rhizosphere and root-associated arbuscular mycorrhizal fungal communities

Soil environmental factors affect the structure of arbuscular mycorrhizal (AM) fungal communities present in soil. However, it is not understood to which degree management practices such as tillage lead to dissimilarities between intra- and extraradical AM fungal communities. This study aims to assess the influence of two different soil management practices (conventional tillage and no-till) on the diversity of AMF communities, both in rhizosphere soil and inside corn roots. We hypothesized that under no-till, roots are colonized as they grow through the undisturbed fungal mycelia left from the previous crop whereas under conventional tillage they are colonized by those propagules that survived disturbance and can re-establish in their new relocated and mixed environment. We predicted that the degree of similarity of AM fungal communities inside versus outside the roots would be greater under no-till than under tillage. Using terminal restriction fragment length polymorphism (T-RFLP) and denaturing gradient gel electrophoresis we observed a different AM fungal community present in roots under no-till than under conventional tillage. Moreover, the communities present in the rhizosphere soil were different than in the roots of the corn plants. These results suggest that soil management does alter the diversity of AM fungal communities associated with corn roots and that plants influence the structure of the AMF community colonizing their roots. Sequencing results indicated that the majority of AMF species found in this agricultural soil was Glomus spp. However, further work is required to determine the extent to which AM fungal genotypic alterations by soil management influences competitive relationships.     

Cover crop identity determines root fungal community and arbuscular mycorrhiza colonization in following main crops

Cover crops (CC) can promote nutrient retention and recycling for main crops yet may also promote soilborne pathogens or suppress beneficial root symbionts such as arbuscular mycorrhizal fungi (AMF). We investigated how root fungal communities of main crop are affected by preceding CC monocultures and mixtures and by main crop identity. We expected that AMF abundance and diversity in main crops are promoted by AM-host CC, and suppressed by non-AM-host CC, and that mixtures of CC species can promote beneficial and suppress pathogenic root fungi. Our full-factorial field experiment comprised crop rotation in sand soil with different CC treatments (monocultures of radish [AM non-host], ryegrass, clover, vetch [AM hosts], mixtures of radish + vetch, ryegrass + clover and fallow) and two main crops (oat and endive). At peak crop growth, we investigated the root fungal communities in the main crops using microscopy and high throughput sequencing (Illumina MiSeq). Cover crop identity was of prime importance and CC legacy overruled main crop identity in determining root fungal communities in main crops. Compared with fallow, CC with ryegrass increased AMF colonization and richness in both main crops and of non-AMF in oat. Legacies of ryegrass, ryegrass + clover and vetch resulted in distinct root fungal communities in the main crops, while the legacy of CC with radish were similar to the legacy of fallow. Root fungal community in crops after clover had highest abundance of representative fungal pathogens in contrast with the other CC treatments that resulted in fungal communities where pathogens were scarce. Oppositely to expected, CC mixtures did not enhance fungal symbionts or suppressed pathogens. Overall, fungal communities in roots of the main crops in our field experiment were determined by the preceding CC species in monoculture, rather than by the CC AMF preference or functional group. This research highlights that the choice of CC determines the root fungal community in main crop which may influence crop quality.     

Plant type differently promote the arbuscular mycorrhizal fungi biodiversity in the rhizosphere after revegetation of a degraded, semiarid land

It is suggested that the diversity of arbuscular mycorrhizal fungi (AMF) and their association with distinct plants species are crucial in the early stages of revegetation procedures since the AMF roots colonisation plays an important role improving plant establishment and growth. We carried out a study where we analyse the AMF community composition in the roots of Ephedra fragilis, Rhamnus lycioides, Pistacia lentiscus and Retama sphaerocarpa fourteen months after revegetation in a Mediterranean semiarid degraded area of southeast Spain in order to verify whether different plant species can variably promote the diversity of AM fungi in their rhizospheres after planted. We analysed a portion of approximately 795 bases pairs of the small-subunit ribosomal DNA by means of nested PCR, cloning, sequencing and phylogenetic analyses. Eight fungal sequence types belonging to Glomus group A and B and to the genus Paraglomus were identified. The different plant species had different AM fungal community composition. Thus, R. lycioides harboured the highest number of four fungal sequence types while from E. fragilis only two types could be characterized that were specific for this plant species. P. lentiscus and R. sphaerocarpa harboured each one three sequence types and two of them were shared. All AMF sequence types were found in the natural soil. These results show that one effective way of restoring degraded lands is to increase the number of plant species used, which would increase the AMF diversity in the soil and thus the below-ground, positive interactions.     

Molecular characterization and glomalin production of arbuscular mycorrhizal fungi colonizing a heavy metal polluted ash disposal island, downtown Venice

In this work the arbuscular mycorrhizal (AM) fungal communities colonizing a polluted ash dump island, downtown Venice, were studied by using a multimodal approach. The island, Sacca San Biagio, was covered with a thick layer of municipal solid waste residues produced by an incinerator operating from 1973, to 1984. Such residues contained high levels of heavy metals (Cu, Pb and Zn). We characterized the AMF communities present in soils on Sacca San Biagio island by using molecular methods. Nine AM fungal sequence types were detected in the roots of three plant species, representative of the dominant flora, by using partial SSU ribosomal RNA genes. The most abundant sequence types corresponded to Glomus intraradices/Glomus fasciculatum, and to Glo18, a sequence detected so far only in planta. Two sequences were new to science. Glomalin-related soil protein (GRSP), extracted from rhizosphere soil of dominant plant species, ranged from 1.6 to 2.3 mg g⁻¹. The occurrence of an active AM fungal community able to live in such harsh environment was evinced by the correlation between mycorrhizal colonization and GRSP content.     

Impact of 12-year field treatments with organic and inorganic fertilizers on crop productivity and mycorrhizal community structure

The effect of manure and mineral fertilization on the arbuscular mycorrhizal (AM) fungal community structure of sunflower (Helianthus annuus L.) plants was studied. Soils were collected from a field experiment treated for 12 years with equivalent nitrogen (N) doses of inorganic N, dairy manure slurry, or without N fertilization. Fresh roots of tall fescue (Festuca arundinacea Schreb.) grass collected from the field plots without N fertilization and unfumigated field soils were used as native microbial inoculum sources. Sunflower plants were sown in pots containing these soils, and three different means of manipulating the microbial community were set: unfumigated soil with fresh grass roots, fumigated soil with fresh grass roots, or fumigated soil with sterilized grass roots. Assessing the implications with respect to plant productivity and mycorrhizal community structure was investigated. Twelve AM fungal OTUs were identified from root or soil samples as different taxa of Acaulospora, Claroideoglomus, Funneliformis, Rhizophagus, and uncultured Glomus, using PCR-DGGE and sequencing of an 18S rRNA gene fragment. Sunflower plants grown in manure-fertilized soils had a distinct AMF community structure from plants either fertilized with mineral N or unfertilized, with an abundance of Rhizophagus intraradices-like (B2). The results also showed that AM inoculation increased P and N contents in inorganic N-fertilized or unfertilized plants, but not in manure-fertilized plants.     

Effect of Syrian Indigenous Arbuscular Mycorrhizal Fungi in Combination with Manure on the Growth of Cotton (Gossypium hirsutum L.)

A pot experiment was conducted to evaluate the effect of indigenous arbuscular mycorrhizal fungi (AMF) and the synergy of indigenous AMF and sheep manure (SM) on cotton growth and nitrogen and phosphorus uptake. AMF were a mixture of Glomus viscosum, Glomus mosseae, and Glomus intraradices initially isolated from a Syrian cotton field. Dry biomass was enhanced significantly by AMF and was higher at AMF plus SM treatment compared to control. Cotton plants showed a significant dependency to indigenous AMF, which was 52% in the AMF treatment. Plant concentrations of nitrogen (N)and phosphorus (P) were significantly higher in mycorrhizal than nonmycorrhizal plants. Maximum plant N and P uptake was found in the treatment of AMF inoculation with SM, which was significantly higher by 202% and 397% over control, respectively. Indigenous AMF was successful in colonizing cotton roots and when combined with SM resulted in better plant growth and N and P uptake.     

Diversity and seasonal variations of mycorrhiza and rhizosphere bacteria in three common plant species at the Slovenian Ljubljana Marsh

Interactions between plants and microorganisms can significantly affect plant health and productivity as well as ecosystem functioning. Detailed knowledge of the tripartite relationships between plants, fungi, and bacteria, and their environment is still limited. In the present study, the soils adjacent to three plant species (Cruciata laevipes, Mentha piperita, Equisetum arvense) in the Ljubljana Marsh and the bulk, plant-free soil were analyzed for their bacterial community structure in June and October 2006. The terminal restriction fragment length polymorphism analysis indicated a different bacterial community structure in the rhizosphere and in bulk soil, however, with almost no seasonal changes between late spring and autumn samples and no apparent impact of the three plant species. In addition, root colonization of the three plant species by arbuscular mycorrhizal fungi (AMF) and dark septate endophytes (DSE) was microscopically assessed monthly from May until October 2006. A presumably accidental correlation between monthly precipitation and the degree of arbuscule formation, with the latter lagging 1 month, was noted for M. piperita, the most heavily colonized of the three plant species. With all three plants, the phosphorus content in roots correlated positively with most AMF structures. Microsclerotia of DSE were mainly abundant in autumn samples. Fungal diversity in roots was estimated using temporal temperature gradient gel electrophoresis separation of the fungal polymerase chain reaction products obtained for both 18S-rDNA and the 5.8S-ITS2-28S rDNA segments. No specific effects of either plant species or seasonal changes on mycorrhizal community structure were discernible.     

Impact of a 5-year winter cover crop rotational system on the molecular diversity of arbuscular mycorrhizal fungi colonizing roots of subsequent soybean

The impact of winter cover crops, specifically wheat (Triticum aestivum L.), red clover (Trifolium pratense L.), and rapeseed (Brassica napus L.) or winter fallow, on community composition of arbuscular mycorrhizal fungi (AMF) in subsequent soybean roots was investigated in a 5-year field trial on andosolic soils in Japan. Soybean roots were sampled at full-flowering and analyzed for AMF communities using a partial LSU rDNA region. Phylogenetic analysis detected 22 AMF phylotypes, including eight Glomus, three Gigaspora, two Scutellospora, three Acaulospora, two Rhizophagus, and one of Funneliformis, Diversispora, Paraglomus, and an unknown glomeromycete in the roots. The 5-year rotation of different winter cover crops or winter fallow did not impact the molecular diversity of AMF communities colonizing the roots of subsequent soybean. In all of the rotations, Glomus and Gigaspora phylotypes were common to soybean roots over the 5-year period. Redundancy analysis (RDA) demonstrated that AMF communities in the roots of subsequent soybean were not significantly different among winter cover crop rotations or fallow. However, AMF communities in soybean roots were clearly influenced by rotation year suggesting that climate or other environmental factors were more important than winter cover cropping system management.     

Perennial plant species from semiarid gypsum soils support higher AMF diversity in roots than the annual Bromus rubens

The arbuscular mycorrhizal fungi (AMF) communities composition regulate plant interactions and determine the structure of plant communities. In this study we analysed the diversity of AMF in the roots of two perennial gypsophyte plant species, Herniaria fruticosa and Senecio auricula, and an annual herbaceous species, Bromus rubens, growing in a gypsum soil from a semiarid area. The objective was to determine whether perennial and annual host plants support different AMF communities in their roots. The roots were analysed by nested PCR, cloning, sequencing of the ribosomal DNA small subunit region and phylogenetic analysis. Twenty AMF sequence types, belonging to the Glomus group A, Glomus group B, Diversisporaceae, Acaulosporaceae, Archaeosporaceae and Paraglomeraceae, were identified. Both gypsophyte perennial species, H. fruticosa and S. auricula had different compositions of the AMF community and higher diversity than B. rubens. This annual plant species shared the full composition of its AMF community with both perennial plant species. Seasonal variations in the colonisation of AM fungi could explain the observed differences in AMF community composition, but this is still a working hypothesis that requires the analysis of further data obtained from a higher number of both annual and perennial plant species in order to be fully tested.     

Do the impacts of alien invasive plants differ from expansive native ones? An experimental study on arbuscular mycorrhizal fungi communities

No studies have compared so far the effects of alien invasive and expansive native (widespread, mono-dominant) plants on arbuscular mycorrhizal fungi (AMF). Four global or European most successful invaders (Impatiens glandulifera, Reynoutria japonica, Rudbeckia laciniata, Solidago gigantea) and two expansive plants native to Europe (Artemisia vulgaris, Phalaris arundinacea) were grown in pots to elucidate the magnitude and direction of changes in AMF abundance, species richness, and species composition in soils from under multispecies native vegetation. In a second stage, the effects of these changes on a native plant, Plantago lanceolata, were assessed. Plant species identity had larger impact on AMF abundance, species richness, and species composition as well as on P. lanceolata than origin of the species (alien vs. native). This could be due to the character of AMF relationships with the plants, i.e., their mycorrhizal status and dependency on AMF. However, the alterations induced by the plant species in soil chemical properties rather than in AMF community were the major drivers of differences in shoot mass and photosynthetic performance of P. lanceolata. We determined that the plants produced species-specific effects on soil properties that, in turn, resulted in species-specific soil feedbacks on the native plant. These effects were not consistent within groups of invaders or natives.     

Differential growth response of Curculigo orchioides to native arbuscular mycorrhizal fungal (AMF) communities varying in number and fungal components

The study reports diversity of arbuscular mycorrhizal fungal (AMF) species in the rhizosphere of an endangered anticancerous herb – Curculigo orchioides Gaertn. in its natural habitat. A total of 18 species of AMF, belonging to three genera (Acaulospora, Glomus and Gigaspora) were recorded, with Glomus microcarpum being the most abundant species type. The AMF species composition across the study sites appeared to be influenced by soil pH rather than soil P and vegetation. Acaulospora laevis spores were restricted to sites where the soil pH was acidic. The effectiveness of these native AMF species on growth performance of C. orchioides plants was compared under experimental conditions. In general, the mycorrhizal plants were superior in most of the evaluated parameters, but the extent to which the growth of mycorrhizal plants was influenced varied with the inocula used. The plants inoculated with mixed consortia containing maximum AMF species richness exhibited improved growth in comparison to consortia containing lower AMF diversity and monospecies cultures. The variable plant responses observed with any two consortia having same species richness in the present study could be due to variable component AMF species and their relative abundance. These results emphasize the need to protect the below-ground diversity of AMF and recommend their usage for restoration practices.     

In situ dynamics of soil fungal communities under different genotypes of potato, including a genetically modified cultivar

Fungi are key to the functioning of soil ecosystems, and exhibit a range of interactions with plants. Given their close associations with plants, and importance in ecosystem functioning, soil-borne fungi have been proposed as potential biological indicators of disturbance and useful agents in monitoring strategies, including those following the introduction of genetically modified (GM) crops. Here we report on the impact of potato crop varieties, including a cultivar that was genetically modified for its starch quality, on the community composition of the main phyla of fungi in soils, i.e. Ascomycota, Basidiomycota and Glomeromycota in rhizosphere and bulk soil. Samples were collected at two field sites before sowing, at three growth stages during crop development and after the harvest of the plants, and the effects of field site, plant growth stage and plant cultivar (genotype) on fungal community composition assessed using three phylum-specific T-RFLP profiling strategies and multivariate statistical analysis (NMDS ordinations with ANOSIM test). In addition, fungal biomass, arbuscular mycorrhizal colonization of roots and activities of extracellular fungal enzymes (laccases, Mn-peroxidases and cellulases) involved in degradation of lignocelluloses-rich organic matter were determined. Fungal community compositions, densities and activities were observed to differ significantly between the rhizosphere and bulk soil. The most important factors determining fungal community composition and functioning were plant growth stage for the rhizosphere communities and location and soil properties for the bulk soil communities. The basidiomycetes were the most numerous fungal group in the bulk soils and in the rhizosphere of young plants, with a shift toward greater ascomycete numbers in the rhizosphere at later growth stages. There were no detectable differences between the GM cultivar and its parental cultivar in terms of influence on fungal community structure of function. Fungal community structure and functioning of both GM- and parental cultivars fell within the range of other cultivars at most sampling moments.     

Influence of mycorrhizal inoculation on carrot growth,metabolites and nutrition

Mycorrhizae are fungal symbionts forming mutualistic relationships with plant roots. This study was undertaken to evaluate the overall influence of arbuscular mycorrhizal fungi (AMF) on the overall growth and development of carrot plant. Surface-sterilized seeds of carrot were sown in earthen pots filled with sterile soil. Half of the pots were inoculated with AMF spores; the other half without any AMF inoculation represented control. After germination inoculated plants, along with the controls, were sampled at 20, 40, 60 and 80 days of growth after seedling emergence. There is a progressive net increase in growth with each 20-day interval after seedling emergence. Storage roots of carrot had a higher level of metabolites and nutrients like nitrogen, phosphorus and potassium in mycorrhiza colonized plants than the control. High performance liquid chromatography analysis indicated an increase in the carbohydrate fractions in AMF-inoculated roots. Thus, mycorrhiza has been found increasing the growth, metabolites and nutrition of carrot plant.     

Arbuscular mycorrhizal fungi pre-inoculant identity determines community composition in roots

Pre-inoculation of seedlings with commercial, typically non-indigenous, AMF inoculants is common practice in horticultural and land reclamation industries. How these practices influence AMF community composition in pre-inoculated seedlings after they are planted in soil containing a resident AMF community is almost completely unknown. However, there may be important implications regarding success of horticultural practices, as well as unexpected ecological consequences. In this study we exposed Leucanthemum vulgare seedlings to five different AMF treatments (pre-inoculation with a representative of Glomus group A and Glomus group B, one of two Gigaspora spp., or no AMF) prior to exposure to a whole-soil, mixed-AMF community inoculum. After a growth period of 75 additional for 28 days, AMF community composition within the roots was analyzed using an approach combining LSU rDNA sequencing and T-RFLP analysis. Our results indicate that the AMF communities that assemble within roots were strongly influenced by AMF pre-inoculant identity. Pre-inoculation with either Glomus spp., unlike what was found for Gigaspora, greatly restricted numbers of other AMF ribotypes able to subsequently colonize roots after exposure to our Glomeraceae-dominated field soil; this suggested that phylogenetic relatedness and life history strategies may play a role in AMF community assembly. Our results further revealed concurrent changes in AMF community functions, as indicated by differences in plant biomass and foliar nutrients. These results serve to highlight the importance of considering life history differences when designing AMF inoculants and may have important implications regarding the introduction of non-indigenous AMF.     

Field inoculation effectiveness of native and exotic arbuscular mycorrhizal fungi in a Mediterranean agricultural soil

In sustainable agriculture, arbuscular mycorrhizal (AM) fungal inoculation in agronomical management might be very important, especially when the efficiency of native inocula is poor. Here, we assessed the effect of native and exotic selected AM fungal inocula on plant growth and nutrient uptake in a low input Trifolium alexandrinum-Zea mays crop rotation. We evaluated the effects of four exotic AM fungal isolates on T. alexandrinum physiological traits in greenhouse. Then, the field performances of T. alexandrinum inoculated with the exotic AMF, both single and mixed, were compared to those obtained with a native inoculum, using a multivariate analysis approach. Finally, we tested the residual effect of AM fungal field inoculation on maize as following crop. Multivariate analysis showed that the field AM fungal inoculation increased T. alexandrinum and Z. mays productivity and quality and that the native inoculum was as effective as, or more effective than, exotic AM fungal isolates. Moreover, the beneficial effects of AMF were persistent until the second year after inoculation. The use of native AMF, produced on farm with mycotrophic plants species, may represent a convenient alternative to commercial AM fungal inocula, and may offer economically and ecologically important advantages in sustainable or organic cropping systems.     

Influence of grass species and soil type on rhizosphere microbial community structure in grassland soils

A number of studies have reported species specific selection of microbial communities in the rhizosphere by plants. It is hypothesised that plants influence microbial community structure in the rhizosphere through rhizodeposition. We examined to what extent the structure of bacterial and fungal communities in the rhizosphere of grasses is determined by the plant species and different soil types. Three grass species were planted in soil from one site, to identify plant-specific influences on rhizosphere microbial communities. To quantify the soil-specific effects on rhizosphere microbial community structure, we planted one grass species (Lolium perenne L.) into soils from three contrasting sites. Rhizosphere, non-rhizosphere (bulk) and control (non-planted) soil samples were collected at regular intervals, to examine the temporal changes in soil microbial communities. Rhizosphere soil samples were collected from both root bases and root tips, to investigate root associated spatial influences. Both fungal and bacterial communities were analysed by terminal restriction fragment length polymorphism (TRFLP). Both bacterial and fungal communities were influenced by the plant growth but there was no evidence for plant species selection of the soil microbial communities in the rhizosphere of the different grass species. For both fungal and bacterial communities, the major determinant of community structure in rhizospheres was soil type. This observation was confirmed by cloning and sequencing analysis of bacterial communities. In control soils, bacterial composition was dominated by Firmicutes and Actinobacteria but in the rhizosphere samples, the majority of bacteria belonged to Proteobacteria and Acidobacteria. Bacterial community compositions of rhizosphere soils from different plants were similar, indicating only a weak influence of plant species on rhizosphere microbial community structure.     

Molecular community analysis of arbuscular mycorrhizal fungi associated with five selected plant species from heavy metal polluted soils

Arbuscular mycorrhizal fungi (AMF) are known to play an important role in plant tolerance to heavy metals (HMs) stress. This study aimed to understand the diversity of AMF communities associated with five selected plant species (Phytolacca americana, Rehmannia glutinosa, Perilla frutescens, Litsea cubeba and Dysphania ambrosioides) from severely HMs polluted soils in Dabaoshan Mine region, China, using molecular methods. Plant roots and rhizospheric soils were sampled from four sites, respectively. Targeting the fungal small subunit (SSU) rRNA gene, PCR-denaturing gradient gel electrophoresis (DGGE) analysis indicated that varied AMF communities colonized different plant species, and the AMF communities in rhizospheric soils were different from those in plant roots. Total six SSU rRNA gene clone libraries including four root samples and two rhizospheric soil samples were constructed. Screening clone libraries by DGGE and sequence analysis revealed that Glomus dominated all of the samples except for the roots of D. ambrosioides, while Kuklospora and Ambispora dominated the roots of D. ambrosioides and the rhizosphere of P. americana. This study indicates that diverse AMF are associated with these selected plants, and they are potentially useful to promote the phytoremediation of this HMs polluted area.     

The application of an organic amendment modifies the arbuscular mycorrhizal fungal communities colonizing native seedlings grown in a heavy-metal-polluted soil

A mesocosm experiment was conducted to investigate whether communities of arbuscular mycorrhizal (AM) fungi associated with roots of native (Piptatherum miliaceum, Retama sphaerocarpa, Psoralea bituminosa, Coronilla juncea, and Anthyllis cytisoides) and for comparison (Lolium perenne) seedlings in a heavy-metal-contaminated, semiarid soil were affected by the application of composted sugar beet waste. We also investigated whether there were relation between AMF diversity and metal concentration (Al, Cd, Cu, Fe, Mn, Pb and Zn) and total P in shoot as well as some soil parameters (total organic carbon and total N) when the SB waste was added to the soil. We analyzed a portion of approximately 795 base pairs of the small-subunit (SSU) rRNA gene by nested PCR, cloning, sequencing, and phylogenetic analyses. Twelve different AMF sequence types were distinguished: seven of these belonged to Glomus group A, one to Glomus group B, one to Diversispora, one to Archaeospora, and two to Paraglomus. The AM fungal populations colonizing roots in a heavy-metal-polluted soil were quite dependent on the host plant, the highest diversity values being obtained in authochtonous plants recognized as metallophytes, such as P. bituminosa, and in an allochtonous, invasive species (L. perenne). No significant correlation was found between AMF diversity and plant metal concentration and soil parameters. Excepting P. bituminosa, when sugar beet waste was added to soil, the populations of AM fungi in roots increased and the shoot metal concentrations decreased in all host plant species studied. Therefore, the addition of sugar beet waste can be considered a good strategy for the remediation and/or phytostabilization of mine tailing sites.