Population fragmentation and extinction in the Iberian lynx

We studied the relationship between extinction frequencies of Iberian lynx subpopulations (Lynx pardinus) and their size and isolation during a 35-year period of strong geographic range contraction. At the end of this period there were fewer fragmentation events, fewer lynx populations of small size, and less isolation between them, than in simulated geographic ranges derived from a random distribution of local extinctions. Only small populations occupying <500 km² went extinct. Local extinction in large, self-sustainable populations probably resulted from the sole action of deterministic factors, e.g. widespread prey decline. As compared with large populations, small ones experienced increased contraction per unit occupied area, which may reflect demographic unstability. The consistent effect of isolation on extinction suggests that such unstability was often prompted by reduced immigration and the subsequent disruption of metapopulation equilibrium. Several practical recommendations could be derived. Provided that habitat quality was adequate, a lynx population should avoid extinction within 35 years if it occupied an area of at least 500 km². The persistence of small populations will also be enhanced by minimizing the distances to neighbouring populations within 30 km, and by maximizing the area occupied by these neighbours. Therefore, habitat management, or any other restoration action, directed to expand the area occupied by a small lynx population should be best located at points of its boundaries oriented towards other existing nearby populations.     

Beaver (Castor canadensis) mitigate the effects of climate on the area of open water in boreal wetlands in western Canada

Shallow open water wetlands provide critical habitat for numerous species, yet they have become increasingly vulnerable to drought and warming temperatures and are often reduced in size and depth or disappear during drought. We examined how temperature, precipitation and beaver (Castor canadensis) activity influenced the area of open water in wetlands over a 54-year period in the mixed-wood boreal region of east-central Alberta, Canada. This entire glacial landscape with intermittently connected drainage patterns and shallow wetland lakes with few streams lost all beaver in the 19th century, with beaver returning to the study area in 1954. We assessed the area of open water in wetlands using 12 aerial photo mosaics from 1948 to 2002, which covered wet and dry periods, when beaver were absent on the landscape to a time when they had become well established. The number of active beaver lodges explained over 80% of the variability in the area of open water during that period. Temperature, precipitation and climatic variables were much less important than beaver in maintaining open water areas. In addition, during wet and dry years, the presence of beaver was associated with a 9-fold increase in open water area when compared to a period when beaver were absent from those same sites. Thus, beaver have a dramatic influence on the creation and maintenance of wetlands even during extreme drought. Given the important role of beaver in wetland preservation and in light of a drying climate in this region, their removal should be considered a wetland disturbance that should be avoided.     

Statewide modeling of bobcat, Lynx rufus, habitat in Illinois, USA

We used sighting location and remotely sensed habitat data, multivariate statistical techniques, and a geographic information system to model bobcat (Lynx rufus) habitat in Illinois, thereby providing state wildlife managers with information to review the listing of bobcats as a state-threatened species and contribute to the development of a statewide management plan. We used canonical discriminant function analysis to model presence/absence and relative abundance of bobcats statewide. These models suggested that bobcats occurred in moderate to high abundance in 23 of 98 counties statewide (23%). We used stepwise logistic regression (SLR) analysis to model statewide habitat suitability. Spatial modeling of the SLR equation predicted that 29% of Illinois contained suitable habitat classified as P>0.50. Models were accurate when validated with an independent data set and indicated the importance of woods-related habitat variables to bobcats. In conclusion, these models provided tools to rapidly assess status that contributed to delisting bobcats as a threatened species in Illinois and provided further information to guide conservation efforts.     

Conserving marginal populations of the food plant (Impatiens noli-tangere) of an endangered moth (Eustroma reticulatum) in a changing climate

Impatiens noli-tangere is scarce in the UK and probably only native to the Lake District and Wales. It is the sole food plant for the endangered moth Eustroma reticulatum. Significant annual fluctuations in the size of I. noli-tangere populations endanger the continued presence of E. reticulatum in the UK. In this study, variation in population size was monitored across native populations of I. noli-tangere in the English Lake District and Wales. In 1998, there was a crash in the population size of all metapopulations in the Lake District but not of those found in Wales. A molecular survey of the genetic affinities of samples in 1999 from both regions and a reference population from Switzerland was performed using AFLP and ISSR analyses. The consensus UPGMA dendrogram and a PCO scatter plot revealed clear differentiation between the populations of I. noli-tangere in Wales and those in the Lake District. Most of the genetic variation in the UK (H_T=0.064) was partitioned between (G_ST=0.455) rather than within (H_S=0.034) regions, inferring little gene flow occurs between regions. There was similar bias towards differentiation between metapopulations in Wales, again consistent with low levels of interpopulation gene flow. This contrasts with far lower levels of differentiation in the Lake District which suggests modest rates of gene flow may occur between populations. It is concluded that in the event of local extinction of sites or populations, reintroductions should be restricted to samples collected from the same region. We then surveyed climatic variables to identify those most likely to cause local extinctions. Climatic correlates of population size were sought from two Lake District metapopulations situated close to a meteorological station. A combination of three climatic variables common to both sites explained 81-84% of the variation in plant number between 1990 and 2001. Projected trends for these climatic variables were used in a Monte Carlo simulation which suggested an increased risk of I. noli-tangere population crashes by 2050 at Coniston Water, but not at Derwentwater. Implications of these findings for practical conservation strategies are explored.     

Ecology of the native and introduced crayfishes Austropotamobius pallipes and Procambarus clarkii in southern Spain and implications for conservation of the native species

The former and present distribution of white clawed crayfish (Austropotamobius pallipes) in the province of Granada (southern Spain) is studied. Before 1980 it was widely distributed but at present only 16 populations exist. The decline is related to the presence of the freshwater red-swamp crayfish (Procambarus clarkii), an American species, vector of the aphanomycosis disease, introduced to the Iberian Peninsula in 1974 and now widely distributed in the watercourses and marshes of southern Spain. To establish an appropriate conservation policy for A. pallipes at its southernmost distribution limit, we studied watercourses from two river basins, Genil and Guadiana Menor, (tributaries of the Guadalquivir River). P. clarkii inhabits the medium to lower reaches of these two river basins (with its upper limit at 820 m a.s.l.). The distribution of this species was best explained by the effect of three of the 12 analyzed variables: altitude, water-current and minimum winter temperatures. From our results, the repopulation of the native crayfish is almost impossible in those reaches inhabited by P. clarkii. However, based on the habitat selection study, it is clear that upper reaches are unsuitable for the red-swamp crayfish, where the native white-clawed crayfish may have greater survival possibilities, and these sites can be used for future restocking projects.     

Two genetically distinct units of the Chinese sika deer (cervus nippon): analyses of mitochondrial DNA variation

Chinese sika deer, Cervus nippon, are currently threatened by habitat loss, fragmentation and human hunting, which has led to the extinction of three subspecies in the wild. The remaining subspecies subsist in the narrow regions of Jilin, Heilongjiang, Sichuan, Gansu, Jiangxi, Anhui, and Zhejiang provinces. In order to design effective conservation strategies for the Chinese sika deer, we have investigated genetic diversity, population structure and gene flow in the Chinese sika deer populations by analyzing ≈995 base pairs of the mitochondrial DNA (mtDNA) control region in 59 individuals sampled from the northeast of China, Sichuan, Jiangxi and Zhejiang. Chinese sika deer exhibited low mtDNA diversity and high gene flow among the four populations, and showed no strong geographical structure. The analyses of mtDNA variation among individuals of sika deer identified only two main phylogenetic groups even though three subspecies were sampled. These data singles out the Zhejiang population as being highly genetically distinct and worthy of separate conservation consideration. Therefore, it is recommended that a breeding program for the Zhejiang population be established.     

Behavioural response of a trophic specialist, the Iberian lynx, to supplementary food: Patterns of food use and implications for conservation

Prey scarcity compromises population survival, especially for specialist predators. Supplementary feeding is a management tool that can be applied to reverse the decline of food-limited populations. We analyse how a population of Iberian lynx, a threatened food specialist, initially reacted to, and subsequently used, supplementary food. Twenty-seven feeding stations (FS) with domestic rabbits were placed in the Doñana Biological Reserve, SW Spain, between 2002 and 2005. We recorded lynx tracks inside and around stations to analyse spatio-temporal patterns of use, as well as the performance of several station designs. Iberian lynx used 62% of the FS installed, and consumed most of the supplied food. All station designs were used and food provision apparently covered the energetic needs of the lynx inhabiting the reserve. There was spatial aggregation in the use of the FS. Fourteen weeks were needed on average for lynx to become familiar with feeding stations and making a regular use of the supplementary food. Seasonal variations in consumption frequency appeared to be modulated by fluctuations of wild rabbit numbers throughout its annual cycle as well as by variation in energy demand of breeding females. The Iberian lynx responded positively to our supplementary feeding programme. We show that this technique allows the persistence of lynx populations during long periods in areas where wild rabbits are extremely scarce. Supplementary food may be used to sustain lynx whenever rabbit populations need recovery, as well as in the context of lynx restocking or reintroduction programmes.     

Relationship between population size and genetic diversity in endangered populations of the European bullhead (Cottus gobio): implications for conservation

This study investigated the relationship between the current size of endangered bullhead (Cottus gobio) populations and microsatellite genetic variability. Additionally, the microsatellite data were used to evaluate whether a genetic test for population bottlenecks was able to provide evidence of recent severe population declines. Finally, our results were used to develop conservation priorities and measures. Population size appears to be a crucial parameter in determining the amount of genetic diversity that can be preserved in bullheads, since a significant positive correlation was observed between both variables. Furthermore, in some populations we were able to detect genetic signatures of the documented decline in population size. We suggest that the most immediate goal for bullhead conservation should be to increase the size and the range of the populations, and in doing so minimise or even reverse further genetic erosion. Potential management actions like habitat quality improvement, reduction of river fragmentation and supplementation programmes (translocation, supportive breeding) are discussed.     

Seasonal movements in the Sumatran orangutan (Pongo pygmaeus abelii) and consequences for conservation

Preservation of orangutan habitat can only be effective when their range requirements are taken into consideration. Here, the effect of the variation in fruit supply at different altitudes on the seasonal movements of orangutans is investigated. Transects were surveyed every 2 months from 1998 to 2000, at different altitudinal zones in the larger Ketambe area, Indonesia. The density of orangutan and sources of ripe fruit with soft pulp were determined along these transects. Both orangutan density and the availability of fruit varied considerably throughout the survey period at different altitudinal zones. The peaks in fruit production at different altitudes occurred in successive periods. For each altitudinal zone a significant correlation was found between orangutan density and the number of fruit sources, which shows that orangutans follow the production of fruit between these altitudinal zones within the boundaries of their home range. Orangutans with core areas in intermediate and highland areas depend seasonally on fruit production of lowland areas, and vice versa. Thus, conservation of large tracts of primary forest with a range of different altitudes is necessary to preserve the remaining orangutan population.     

New insights into the origins and evolution of rhizobia that nodulate common bean (Phaseolus vulgaris) in Brazil

It is generally accepted that there are two major centers of genetic diversification of common beans (Phaseolus vulgaris L.): the Mesoamerican (Mexico, Colombia, Ecuador and north of Peru, probably the primary center), and the Andean (southern Peru to north of Argentina) centers. Wild common bean is not found in Brazil, but it has been grown in the country throughout recorded history. Common bean establishes symbiotic associations with a wide range of rhizobial strains and Rhizobium etli is the dominant microsymbiont at both centers of genetic diversification. In contrast, R. tropici, originally recovered from common bean in Colombia, has been found to be the dominant species nodulating field-grown common-bean plants in Brazil. However, a recent study using soil dilutions as inocula has shown surprisingly high counts of R. etli in two Brazilian ecosystems. In the present study, RFLP-PCR analyses of nodABC and nifH genes of 43 of those Brazilian R. etli strains revealed unexpected homogeneity in their banding patterns. The Brazilian R. etli strains were closely similar in 16S rRNA sequences and in nodABC and nifH RFLP-PCR profiles to the Mexican strain CFN 42^T, and were quite distinct from R. etli and R. leguminosarum strains of European origin, supporting the hypothesis that Brazilian common bean and their rhizobia are of Mesoamerican origin, and could have arrived in Brazil in pre-colonial times. R. tropici may have been introduced to Brazilian soils later, or it may be a symbiont of other indigenous legume species and, due to its tolerance to acidic soils and high temperature conditions became the predominant microsymbiont of common bean.     

Genetic variation in the endangered Inner Mongolia endemic shrub Tetraena mongolica Maxim. (Zygophyllaceae)

Tetraena mongolica Maxim, is a critically endangered and endemic species of westem Inner Mongolia in China. Genetic variability within and among eight extant populations of this species was assessed using ISSR PCR (13 primers). We expected a low genetic diversity level, but our results revealed an intermediate level of intraspecific genetic diversity, probably resulting from this species being in a refuge during the last glaciation (at population level: P=48.1%, A_e=1.305, H_E=0.177 and H_pop=0.264; at species level: P=63.3%, A=1.368, H_T=0.213 and Hsp=0.324). A low level of genetic differentiation among populations was detected based on Nei's genetic diversity analysis (16.91%), Shannon's diversity index (18.83%) and AMOVA (15.2%). Populations shared high levels of genetic identity (I=0.9516±0.013). The extensive gene flow was a plausible reason for the low genetic differentiation.     

Conservation of the purple gallinule (Porphyrio porphyrio L.) in Portugal: causes of decline, recovery and expansion

Historical data on the distribution and status of the purple gallinule (Porphyrio porphyrio) in Portugal were collected by bibliographic research, from museum catalogues and from questionnaires to wetland managers, ornithologists and birdwatchers. The population suffered severe decline and range contraction at the end of the 19th century and most of the 20th century, due mainly to habitat loss and degradation and excessive hunting. However, the population has begun to recover in the last decade mainly through direct protection of the species and of the remaining habitat, together with creation of artificial wetlands and a reintroduction programme, and probably also due to immigration from Spain. The population size has increased about 10-fold and the range has expanded to most of its former area. The estimated Portuguese breeding population in 2002 was 49-67 pairs. Densities varied between 0.05 and 7 individuals/ha in recently colonized areas and stable (saturated) areas, respectively. Although the population is recovering, its small size, high fragmentation and several natural and anthropogenic threats lead us to consider it still a species of major concern in Portugal.     

Habitat use and preliminary demographic evaluation of the critically endangered Mediterranean monk seal (Monachus monachus) in the Cilician Basin (Eastern Mediterranean)

Over the last few decades a dramatic decline in the number of Mediterranean monk seals (Monachus monachus) limited scientific studies on the biology, behaviour, and ecology of the species. This lack of information impaired the effectiveness of conservation strategies. Thus, any further information gathered on the monk seal has utmost value in the work to halt and reverse the plight of the species. A hitherto unknown Cilician Basin colony of the Mediterranean monk seal has been investigated during a 6-year period between 1995 and 2001. Results of direct in-cave surveys and land based seal-watch observations enabled the evaluation of habitat use and preliminary demographic information. A total of 39 caves were discovered among which only three were used for breeding. Scarcity of the breeding caves emphasised the importance of breeding habitat in the survival of the colony. Common features of the breeding caves are found as an entrance with a protective barrier against strong waves; a chamber with a wide beach; and a well-sheltered shallow pool. Supplementary data obtained from infrared monitors installed in three actively used caves were used to assess the number of individuals. Throughout the study period, 25 individuals were identified and 11 newborn pups were found. Evaluation of the results suggests the presence of sub-regions inhabited by an individually identified sub-group of monk seals. Recommendations for conservation guided by this information is a Marine Protected Area consisting of two zones; a restricted core zone prohibiting any human activity securing breeding habitat and a restricted fishery zone securing sustainability of the food source.     

Development and reproduction of Sancassania polyphyllae (Acari: Acaridae) feeding on entomopathogenic nematodes and tissues of insect larvae

We studied the effect of different food sources, infective juveniles of the entomopathogenic nematodes, Steinernema feltiae and Heterorhabditis bacteriophora (Rhabditida: Steinernematidae, Heterorhabditidae), and tissues from the insect larva, Polyphylla fullo (Coleoptera: Scarabaeidae) or Galleria mellonella (Lepidoptera: Pyralidae), on the development, reproduction and longevity of Sancassania polyphyllae (Acari: Acaridae). We showed that the immature mite stages - protonymph and tritonymph - could develop to the next developmental stage on living or sonicated (i.e., ruptured) S. feltiae or H. bacteriophora. However, the mite larval stage could only develop to the next developmental stage on sonicated infective juveniles of the nematodes. Subsequently, we demonstrated that S. polyphyllae completed development from protonymph to adult on live S. feltiae or H. bacteriophora, whereas all immature stages of S. polyphyllae completed their development from larva to adult on insect tissues. The total developmental period of S. polyphyllae that fed on insect tissues was significantly shorter than those that fed on live infective juveniles. The pre-oviposition, oviposition, and post-oviposition periods and female longevity were not significantly different among the food sources. The total and daily fecundity of S. polyphyllae feeding on P. fullo and G. mellonella was significantly higher than those feeding on S. feltiae and H. bacteriophora, although there was no significant difference observed between P. fullo and G. mellonella or between S. feltiae and H. bacteriophora. The net reproductive rate (R₀) was highest (588.3♀/♀) when S. polyphyllae fed on P. fullo. The longest mean generation time (T₀) occurred on H. bacteriophora (12.6 days) and the shortest occurred on P. fullo (10.5 days). S. polyphyllae, which fed on P. fullo (r_m=0.61) and G. mellonella (r_m=0.55) had the highest intrinsic rate of increase (r_m) compared to mites that fed on S .feltiae (r_m=0.45) and H. bacteriophora (r_m=0.41).     

Regional conservation priorities for a large predator: golden eagles (Aquila chrysaetos) in the Alpine range

We compared the density of golden eagles (Aquila chrysaetos) and their nest dispersion, productivity and diet in Alpine and pre-Alpine areas. The comparison was made at two spatial scales: (1) at the territory level within two contiguous populations, and (2) at the population level, using published data for 22 populations scattered across four countries (France, Switzerland, Germany and Italy). Availability of golden eagle's main prey species was higher in Alpine than in pre-Alpine regions. The potential foraging ranges of pairs of eagles in the pre-Alps had larger amounts of woodland and lower amounts of suitable foraging habitat than those of Alpine pairs. At both spatial scales, density and productivity were lower in the pre-Alps. Also, pre-Alpine populations were characterised by a lower percentage of main prey species in the diet, which was significantly correlated with productivity, and by a higher breadth of diet, which was negatively correlated with density. Overall, higher prey availability and habitat suitability in the Alps resulted in higher density and breeding success, in a manner compatible with theoretical metapopulation models. We suggest that priority be given to conservation of eagle populations in high quality Alpine habitat, and that conservation action be carried out by a mixture of site-protection measures and conservation of the wider environment.     

Distribution, status, and conservation of radiated tortoises (Geochelone radiata) in Madagascar

The radiated tortoise, Geochelone radiata, one of Madagascar’s four endemic tortoises, occupies a narrow band of xeric spiny forest along the island’s southwest coast. Traditionally avoided by indigenous tribes, these tortoises are now routinely harvested for food. An accurate assessment of human exploitation remains problematic, however, hindered by limited, dated statistics available on tortoise populations. To update the radiated tortoise’s status and distribution, we established a series of line transects at seven localities across its range and implemented a mark-recapture study at one of these localities (Cap Sainte Marie). Tortoises currently range from south of Tulear to east of Cap Sainte Marie, at density estimates spanning 27-5744 tortoises/km². The mark-recapture estimate for Cap Sainte Marie (1905-2105 tortoises/km²) was substantially higher than its transect estimate (654 tortoises/km²) though comparable to actual tortoise captures (1438) there. Thus, our transect density values probably err as underestimates, and from these data, we calculate a conservative total population size of 12 million radiated tortoises. We also examined mitochondrial DNA sequences (ND4 gene) for two individuals/locality in a preliminary assessment of genetic variation across the species’ range. Only two ND4 haplotypes were recovered, the more common haplotype representing 13 of the 14 individuals. We offer several conservation recommendations in light of our survey results.     

Distribution, status, and conservation needs of Asian elephants (Elephas maximus) in Lampung Province, Sumatra, Indonesia

In the mid 1980s, Asian elephant (Elephas maximus) populations were believed to persist in 44 populations on the Indonesian island of Sumatra. Twelve of these populations occurred in Lampung Province, but our surveys revealed that only three were extant in 2002. Causal factors underlying this decline include human population growth, changes in land use, and human-elephant conflict. Nevertheless, our surveys in the Province’s two national parks, Bukit Barisan Selatan and Way Kambas, produced population estimates of 498 (95% CI = [373, 666]) and 180 (95% CI = [144, 225]) elephants, respectively. The estimate for Bukit Barisan Selatan is much larger than previous estimates; the estimate for Way Kambas falls between previous estimates. The third population was much smaller and may not be viable. These are the first estimates for Southeast Asian elephant populations based on rigorous sampling-based methods that satisfied the assumptions of the models used, and they suggest that elephant numbers in these parks are of international importance. While our results suggest that Sumatra’s remaining elephant populations may be larger than expected, they also suggest that the future for these animals is bleak. Human-elephant conflict was reported around all three areas in Lampung and their elephant populations are currently threatened by habitat loss and poaching. Local solutions are possible, but will require much greater commitment by all stakeholders.     

Nectar plant sources for the threatened Apollo butterfly (Parnassius apollo L. 1758) in populations of central Spain

The use of flowers by the apollo butterfly at several sites along the Sierra de Guadarrama (central Spain) is documented. The Apollo butterfly uses a narrow range of flowers as nectar sources. Males feed more frequently on Armeria arenaria, Jasione montana and Carduus carpetanus. Females feed on the same species as males, but incorporate other species in their diet (Jurinea humilis, Thymus bracteata and Anthyllis lotoides). These observations also indicate that Parnassius apollo generally direct their foraging activities towards a limited number of the available plants but that the plants used can differ slightly between sites and change within sites through time. These data on resources for the adult butterflies should serve for the management of the species in future conservation programmes.     

First indications for the involvement of strigolactones on nodule formation in alfalfa (Medicago sativa)

Strigolactones have recently been suggested to be phytohormones that are present in all plants. Strigolactones are released by roots into the rhizosphere, stimulating the seed germination of parasitic plants such as Striga spp. and Orobanche spp. and play a crucial role in the interaction between plants and symbiotic arbuscular mycorrhizal fungi.By applying different concentrations of the synthetic strigolactone analogue GR24 to alfalfa (Medicago sativa) inoculated with Sinorhizobium meliloti we could show that in alfalfa nodulation is positively affected by the presence of the strigolactone analogue GR24. Moreover, we could show that this increased nodulation cannot be linked with a stimulatory effect of GR24 on the growth or the expression of nod genes of S. meliloti.Putative mechanisms operating in the plant in response to the addition of GR24 and leading to increased nodule formation by rhizobia are discussed.