Female biased mortality caused by anthropogenic nest loss contributes to population decline and adult sex ratio of a meadow bird

Meadow breeding birds such as the whinchat Saxicola rubetra have been declining due to increased farming intensity. In modern grassland management, the first mowing and the bird’s breeding cycle coincide, causing high nest destruction rates and low productivity of grassland bird populations. However, it is virtually unknown whether the mowing process directly affects adult survival by accidentally killing incubating females. We studied adult survival of an Alpine whinchat population during two breeding seasons using either colour-ringing or radio-tracking of 71 adults. Assessing territories, mowing phenology and nest destruction from 1988 to 2007 allowed changes in the factors associated with female mowing mortality to be estimated. Adult survival over 5-day-periods was Φ = 0.986, but during the period of mowing female survival was strongly reduced (Φ = 0.946). As a result, 80.6% of the males, but only 68.4% of the females survived the breeding season. Mowing undoubtedly killed two of 20 radio-tagged females when they were laying or incubating. In the 20-year period, an increasing proportion of nests were destroyed before the chicks hatched and this change was associated with an increased distortion of the adult sex ratio. Modelling the population growth rate showed that including the additional effect of mowing on female mortality resulted in a 1.7 times faster local population decline. These results are consistent with the hypothesis that the extinction of whinchat populations in the lowlands of central Europe was caused not only by habitat degradation and low productivity, but also by increased man-made female mortality.     

Higher breeding densities of the threatened little bustard Tetrax tetrax occur in larger grassland fields: Implications for conservation

Previous studies have found that densities of little bustard Tetrax tetrax breeding males tend to be higher in areas with smaller agricultural fields, presumably due to increased habitat diversity. However, exceptionally high densities have been found in large grassland fields in Portugal, which suggests that the influence of field size varies geographically, and that the role of this factor is not yet fully understood, despite its importance as a key management issue.We studied how field size, together with vegetation structure, influences the presence and density of breeding little bustards in a region of southern Portugal. Fifty-four grassland fields were sampled in 2007 and another 29 in 2008, with sizes ranging from 23 to 172 ha. A total of 183 breeding males were found in 47 of these fields, reaching densities of up to 37 males/100 ha. A higher probability of occurrence of breeding males was found in larger fields with a vegetation height below 40 cm and field size alone explained 46% of the variability in male density. These results suggest that larger continuous areas of suitable habitat attract many males, most likely as a consequence of their lek mating system. We conclude that conservation efforts, in a landscape context of large farm sizes, should: (1) be channelled to farms with large fields; (2) ensure adequate livestock grazing to create suitable habitat and (3) promote management at a landscape level to ensure the most continuous grassland habitat patches possible.     

Dispersal of breeding, adult male Phocarctos hookeri: Implications for disease transmission, population management and species recovery

Dispersal impacts on a range of population parameters making it a key piece of information in species conservation. Despite its importance, dispersal is poorly characterized for many species: pinnipeds are no exception. Understanding dispersal patterns of the New Zealand sea lion Phocarctos hookeri is crucial in the conservation management of the species as its recovery to a non-threatened status hinges on range recolonisation. In this study, we examined the movements of breeding adult male New Zealand sea lions within and following the breeding season of the 2002/03 austral summer using a novel multi colony approach. Based on resightings of 202 individually identifiable adult males, we found (1) a previously unappreciated, high level of dispersal by adult territorial males between breeding colonies during the pupping period and (2) that breeding males disperse to the extremes of the species’ range at the end of female oestrous. Our findings are contrary to the current paradigm of otariid breeding behaviour, which is believed to consist of prolonged, uninterrupted male territoriality based on intense male-male competition and sustained fasting. Adult male dispersal between colonies and across the species range has important implications for adult males as vectors of disease in three recent epizootics, species management and species recovery via recolonisation as males are apparently remaining part of a localized, vulnerable breeding population.     

Overwintering management on upland pasture causes shifts in an abundance of denitrifying microbial communities, their activity and N2O-reducing ability

Pasture soils used for cattle overwintering may represent significant sources of N₂O emissions from soils. Therefore, the long-term effect of cattle overwintering on the abundance and activity of a denitrifying community was explored. The study was performed at a cattle overwintering area in South Bohemia (Czech Republic), where three sites differing in the degree of animal impact were selected: severely impacted (SI) and moderately impacted (MI), as well as a control site with no impact (NI). N₂O flux measurement and soil sampling were performed in spring and fall of 2005. The activity was measured in terms of potential denitrification activity. Bacterial nirK, nirS and nosZ genes were used as functional markers of the denitrifying communities; abundance was analyzed using a real-time PCR assay. Surprisingly, in situ N₂O emissions were the highest in spring at MI and significantly differed from those at SI and NI, while in autumn, rates of emissions generally decreased. In contrast potential denitrification rates were highest at SI, followed by MI, and the lowest at NI. An overall significant shift in N₂O/N₂ molar ratio was shown in cattle impacted sites. The highest abundance of all genes measured at both sampling times was found at site SI, whereas at site MI increased numbers were observed only in spring. Our results indicate a strong influence of cattle on the abundance as well as the activity of microbes involved in denitrification.     

Herbicides, weeds and endangered species: management of bitou bush (Chrysanthemoides monilifera ssp. rotundata) with glyphosate and impacts on the endangered shrub, Pimelea spicata

Environmental weed invasion threatens the biodiversity of native species. Unfortunately, managing these weeds may also affect biodiversity adversely. A recent example occurred when glyphosate, a herbicide used to control the highly invasive weed, bitou bush (Chrysanthemoides monilifera ssp. rotundata), accidentally drifted over a small population of an endangered shrub, Pimelea spicata. Following concerns that the affected population would not recover and, thereby, cause the local extinction of P. spicata, we conducted a series of glasshouse and field experiments to explore the impacts of glyphosate on this endangered species. Seedlings and young plants of P. spicata, in which the tap root was undeveloped, were killed by a single application of glyphosate. Older plants with a well developed tap root also died back initially, but about 50% of individuals re-sprouted. This re-growth was associated with a significant decrease in tap root diameter, implying that further disturbance, including repeated treatment with glyphosate, would kill plants by impairing their potential for recovery. Unlike some sclerophyllous native shrubs, the tolerance of P. spicata to glyphosate was limited, even when its growth was slowed artificially by limiting water availability. Winter applications of glyphosate to manage infestations of bitou bush will impact adversely on populations of P. spicata and may also affect the other rare and endangered species whose survival is threatened by this species, even though some natives are unaffected by the herbicide. Protecting native biodiversity from bitou bush will involve sustainable weed management that minimises impacts on non-target native species.     

The recent decline of a New Zealand endemic: how and why did populations of Archey's frog Leiopelma archeyi crash over 1996-2001?

Dramatic changes have been documented in New Zealand's vertebrate faunas since human settlement, involving major declines and extinctions, but over recent years few species have declined in numbers so rapidly as the terrestrial Archey's frog Leiopelma archeyi (Anura: Leiopelmatidae). Long-term monitoring over more than 20 years revealed a major population reduction of the species over 1996-2001 and L. archeyi is now classified as Nationally Critical under the New Zealand threat classification system. The decline progressed northwards in the Coromandel ranges, and mostly larger (female) frogs survived. On a 100 m² study plot at Tapu Ridge, annual population estimates averaged 433 frogs (SE ±32) over 1984-1994, declining by 88% to average 53 frogs (SE ±8) over 1996-2002. A mean annual survival rate of 82% for most years declined to 33% over 1994-1997. There is mounting evidence to suggest that disease is the major agent of decline, supported by (1) the rapidity and severity of decline, (2) the progressive (south to north) nature of decline, and (3) finding frogs with chytriodiomycosis from Batrachochytrium dendrobatidis at the time of decline. Surprisingly, sympatric populations of the semi-aquatic Leiopelma hochstetteri have not declined dramatically, nor has a western population of L. archeyi at Whareorino, despite chytridiomycosis occurring in some frogs there. Sustaining and restoring populations of L. archeyi in New Zealand raises major challenges for conservation management.     

Population management of threatened taxa in captivity within their natural ranges: Lessons from Andean bears (Tremarctos ornatus) in Venezuela

Populations of threatened taxa in captivity within their natural ranges can make important contributions to conservation, but these may be compromised by the inappropriate application of population management goals developed in other contexts. We conducted demographic, genetic, and population viability analyses on the captive population of Andean bears (Tremarctos ornatus) in Venezuela to investigate the management of within-range captive populations in general, and to better integrate this population into the conservation of Andean bears in particular. We found that although the present population is very small and not internally self-sustaining, incorporation of confiscated wild individuals has resulted in a low average number of generations in captivity and low inbreeding, with moderate gene diversity and a high probability of future population persistence. However, past imports from extra-range populations have been from over-represented lineages of unknown origin, which have mixed with under-represented Venezuelan ones, reducing the future value of the Venezuelan population as a source for founder stock. Our analyses indicate that the rate of incorporation of wild recruits is a major factor influencing proxy measures of conservation value, and distinguishing within- from extra-range populations. This implies that, contrary to conventional wisdom, internal self-sustainability can be a misguided goal in within-range populations, which furthermore may not be suitable destinations for surplus animals from captive populations elsewhere.     

Lessons about extinction and translocation: models for eastern barred bandicoots (Perameles gunnii) at Woodlands Historic Park, Victoria, Australia

In 1998 the protected population of Perameles gunnii (eastern barred bandicoot) at Woodlands Historic Park, Victoria, Australia became functionally extinct following removals of individuals for translocation between 1994 and 1996. Population viability analysis and data collected whilst the population was in decline are used to explore the impact that these removals had on the decline of the P. gunnii population at Woodlands. Due to some ambiguities in the life history of P. gunnii at Woodlands, two structurally different population models were used. Explicitly including the removal of animals in the analysis indicates that there may be at least a three-fold increase in the risk of quasiextinction due to removals. In some scenarios, over 17% of the trajectories decrease to a level less than or equal to 10 females within the observed time period of the collapse of the population, that is by April 1998. The modelling approach identified a number of critical factors in the decline of the population, such as variation in survival rates. By representing the life history strategy using two alternate models, quantitative statements about the impact that removals had on the population decline at Woodlands are made. While removals probably contributed to the collapse of the population, removals were not the sole cause of population decline. The real reasons for decline remain unknown; however, it is likely to be closely linked to habitat decline, difficult environmental conditions and predation. If P. gunnii are reintroduced to Woodlands again, then the models presented here may help to develop management strategies to establish a self sustaining population, as well as exploring translocations options.     

The ghost crab Ocypode quadrata (Fabricius, 1787) as a potential indicator of anthropic impact along the Rio Grande do Sul coast, Brazil

The aim of this study is to compare the density and vertical distribution of ghost crab Ocypode quadrata burrows at three beaches with different degrees of anthropic impact. In order to achieve this, 12 1 m² quadrants were laid out at random daily on each beach, over a 100 m wide strip stretching from the dunes to the waterline, in order to estimate the density of the burrows. The results showed that the density of O. quadrata burrows was lower at beaches with higher anthropic impact - Tramandaí and Harmonia. Jardim do Éden beach, which suffers little impact, had the highest density of burrows. Vertical distribution of the burrows at Tramandaí beach was restricted by the presence of a strip which cars drive along. The burrows along this beach tended to be distributed over a strip where there are kiosks which offer protection from the traffic. At Jardim do Éden and Harmonia beaches, vertical distribution of the burrows was affected only by the dynamics of the rise and ebb of the waterline, caused by two storm events. The results showed that the density of ghost crab O. quadrata burrows is a tool of quick and easy use in diagnosing anthropic impact in coastal areas.     

Effects of Medicago sativa, Taraxacum officinale and Bromus sterilis on the density and diversity of Collembola in grassy arable fallows of different ages

The density and diversity of Collembola of nine grassy arable fallows of different ages were investigated in a factorial design with the factors ‘plant species’ (legume: Medicago sativa, herb: Taraxacum officinale, grass: Bromus sterilis) and ‘age class’ (2-3, 6-8 and 12-15 years) including the random effect ‘site’ (1-9). In May 2008, four plots were selected randomly at each fallow. Within each plot five M. sativa, T. officinale and B. sterilis plants were extracted with their associated soil using steel cylinders. The material from each plant species was used for extraction of Collembola and for determination of environmental parameters. Thus, the new aspect of the present study compared to other field studies investigating the relationships between plant and Collembolan communities is the focus on the “micro-scale”, investigating the Collembolan communities of the soil associated with single plants.We found that species richness and density of total and euedaphic Collembola were significantly higher in B. sterilis than in T. officinale samples with the M. sativa samples being intermediate. Fine-root feeding euedaphic Collembola particularly benefited from the higher amount of fine roots in B. sterilis samples. We also discovered that the age of the fallows had no significant influence on the number of Collembolan species and the density of the Collembolan groups. Notably, however, species of the epedaphic genera Lepidocyrtus and Sminthurinus were associated with the 12-15 year-old fallows and presumably benefited from the high number of plant species in the old fallows. Finally, canonical correspondence analysis (CCA) indicated that the soil organic matter content and the microbial biomass, both potential food sources for many Collembolan species, were important structuring forces for the Collembolan communities.     

Impacts of sediment loads, tadpole density, and food type on the growth and development of tadpoles of the spotted tree frog Litoria spenceri: an in-stream experiment

The impact of increased-deposited sediment loads on growth and development of tadpoles of the spotted tree frog, Litoria spenceri, in south-eastern Australia was assessed in conjunction with food type and tadpole density. This investigation was conducted in stream enclosures subjected to varying treatments of tadpole density, substrata and deposited-sediment load. Tadpole growth and development were not significantly affected by food type, but there was a trend toward increased performance on periphyton substrata. Tadpole growth and development were significantly reduced by increases in tadpole density and sediment load. These effects were independent, suggesting that increased sediment load reduced food quality rather than quantity. Activities in catchments that increase sediment loads in streams may adversely affect growth and development of tadpoles of L. spenceri. Increased sediment input into streams may therefore reduce tadpole fitness and recruitment to the terrestrial stage. Disturbance processes that increase stream sediment loads, such as forestry activities and associated road construction, may potentially have contributed to the observed declines of L. spenceri and other lotic anurans in south-eastern Australia.     

Conservation of Pteropus livingstonii based on roost site habitat characteristics on Anjouan and Moheli, Comoros islands

Livingstone's fruit bats, Pteropus livingstonii, (Pteropodidae: Chiroptera) are endemic to only two islands, Moheli and Anjouan of the Comoros Islands in the West Indian Ocean. With an estimated population of less than 2000 individuals, P. livingstonii is listed as Critically Endangered on the International Union for the Conservation of Nature's Red List. Yet the habitat characteristics of these giant fruit bats, or flying foxes, are poorly known. I conducted field research during 5 months in 1998 focused on finding new roost sites, measuring characteristics of both roost sites and roost trees at new as well as previously identified roost sites, and recording the same characteristics for a set of absence sites. I identified six new roost sites allowing me to measure the characteristics of 15 known roost sites and seven absence sites. The study spanned both dry and rainy seasons and I found a significant increase in the number of individuals at roost sites during the rainy season. Bat roost sites were associated with presence of water, southeast aspect, steep slopes, and presence of several native tree species. Roost habitat was characterized based on biotic, abiotic and human factors. This research on habitat characteristics is contributing to the development of a conservation action plan for the Livingstone's fruit bats. However, further research on dry season roost sites and distribution as well as feeding sites is necessary in order to better understand their seasonal habitat requirements and therefore ensure the conservation of P. livingstonii.     

An unseen foe in arthropod conservation efforts: The case of Wolbachia infections in the Karner blue butterfly

Infection by endosymbiotic bacteria is an underappreciated threat to endangered arthropods with serious implications for captive management programs. We examined the nature of Wolbachia infection in the North American endangered Karner blue butterfly, Lycaeides melissa samuelis, as a case study. Screening for Wolbachia across the range of the species confirmed widespread infection in the western half of the Karner blue’s range. Multilocus sequence typing using six genes confirmed that the infection in the western populations is attributable to a single strain of Wolbachia. This strain was also detected in the closely related Melissa blue butterfly, L. m. melissa, the presumed source of the infection. The infection in the Karner blue butterfly was perfectly correlated with the presence of a foreign mitochondrial DNA variant present in the Melissa blue butterfly, consistent with the hypothesis that the mitochondrial introgression was driven by the spread of Wolbachia. A single individual out of 71 screened from the eastern portion of the range of the Karner blue butterfly was also infected, however this infection was attributable to a different strain. Simulation models of the demographic effects of the spread of Wolbachia infection to uninfected populations and metapopulations suggest that such an infection might further reduce already small population sizes and substantially increase the probability of population extirpation. We discuss threats to other endangered arthropods in the light of this case study and make recommendations for minimizing the impact of endosymbiont infections in conservation plans, especially those including captive propagation and augmentation of endangered arthropod populations.     

Population ecology of the Chinese grouse, Bonasa sewerzowi, in a fragmented landscape

We report the first population ecology study of the endangered Chinese grouse (Bonasa sewerzowi). The study population was stable during 1995-2000. Annual rates of survival were 0.64 for adults and only 0.17 for chicks to 13 weeks of age. Reproductive parameters were 6.1 eggs/clutch, 63% nest success, and overall 3.6 chicks hatched/female/year. The spring sex ratio was 64% males, with 44% of the males unmated in spring. Local people found an estimated 10-29% of the nests and took the eggs for food. Only about 9% of the reserve containing the study area is mature mixed forest, the preferred habitat. Inadequate brood habitat may have influenced chick survival and the skewed adult sex ratio may be a result of habitat fragmentation. We recommend protecting the remaining mixed forest, creating more brood habitat, and stopping the taking of eggs.     

Regional conservation priorities for a large predator: golden eagles (Aquila chrysaetos) in the Alpine range

We compared the density of golden eagles (Aquila chrysaetos) and their nest dispersion, productivity and diet in Alpine and pre-Alpine areas. The comparison was made at two spatial scales: (1) at the territory level within two contiguous populations, and (2) at the population level, using published data for 22 populations scattered across four countries (France, Switzerland, Germany and Italy). Availability of golden eagle's main prey species was higher in Alpine than in pre-Alpine regions. The potential foraging ranges of pairs of eagles in the pre-Alps had larger amounts of woodland and lower amounts of suitable foraging habitat than those of Alpine pairs. At both spatial scales, density and productivity were lower in the pre-Alps. Also, pre-Alpine populations were characterised by a lower percentage of main prey species in the diet, which was significantly correlated with productivity, and by a higher breadth of diet, which was negatively correlated with density. Overall, higher prey availability and habitat suitability in the Alps resulted in higher density and breeding success, in a manner compatible with theoretical metapopulation models. We suggest that priority be given to conservation of eagle populations in high quality Alpine habitat, and that conservation action be carried out by a mixture of site-protection measures and conservation of the wider environment.     

Correlates of abundance and breeding success in the globally threatened Hinde's babbler (Turdoides hindei) and its congener, northern pied babbler (T. hypoleucus)

We investigated the relationship between habitat quality, abundance, group size and breeding success in the threatened Kenyan endemic Hinde's babbler (Turdoides hindei; Family Timaliidae), a co-operative breeder mainly associated with riverine thickets in cultivated areas. At two intensively cultivated sites, significantly more Hinde's babbler groups occurred in areas retaining at least 3% thicket cover, while breeding outcome improved where cover exceeded 9%. Despite previous concerns over low breeding success, the percentage of young birds present (17%, n=424 birds aged) was similar to that of a sympatric congener, the northern pied babbler (T. hypoleucus) (12%, n=162), and comparable with that of two other African congeners. Although breeding outcome was positively correlated with adult group size, there was no evidence that larger groups monopolised more favourable habitat or defended larger territories. Group density showed a positive, non-linear relationship with adjacent cover, levelling out where this exceeded 15-20%. Our findings suggest that even a modest increase in thicket cover may significantly raise the density and productivity of Hinde's babblers at these sites.     

Population baseline data for monitoring genetic diversity loss for 2010: A case study for Brassica species in the UK

The Convention on Biological Diversity and the subsequent International Treaty on Plant Genetic Resources for Food and Agriculture have proved a watershed in plant genetic resources (PGR) conservation and consequent initiatives have set various PGR conservation targets to be met by 2010. The aim of our paper is to develop ideas and issues concerning the monitoring of natural genetic resources: particularly in terms of developing a baseline from which to measure levels of genetic diversity. Three species of Brassica (B. nigra, B. oleracea, B. rapa) found wild in the UK were assessed for levels of genetic diversity using AFLP. The relationship between genetic distribution and ecogeographic distribution was considered for each species to determine patterns that may be useful in formulating conservation strategies. Genetic distance between populations of B. nigra and B. rapa were correlated to geographic distance. Levels of genetic polymorphism in B. oleracea were correlated to soil pH while in B. rapa they were correlated to soil coarseness. In terms of PGR conservation these findings may suggest an emphasis toward in situ conservation of a selection of disparate populations would be appropriate where possible as such adaptations may be lost in ex situ collections.     

First indications for the involvement of strigolactones on nodule formation in alfalfa (Medicago sativa)

Strigolactones have recently been suggested to be phytohormones that are present in all plants. Strigolactones are released by roots into the rhizosphere, stimulating the seed germination of parasitic plants such as Striga spp. and Orobanche spp. and play a crucial role in the interaction between plants and symbiotic arbuscular mycorrhizal fungi.By applying different concentrations of the synthetic strigolactone analogue GR24 to alfalfa (Medicago sativa) inoculated with Sinorhizobium meliloti we could show that in alfalfa nodulation is positively affected by the presence of the strigolactone analogue GR24. Moreover, we could show that this increased nodulation cannot be linked with a stimulatory effect of GR24 on the growth or the expression of nod genes of S. meliloti.Putative mechanisms operating in the plant in response to the addition of GR24 and leading to increased nodule formation by rhizobia are discussed.     

Predator control for protecting kaki (Himantopus novaezelandiae)—lessons from 20 years of management

In New Zealand, the endemic kaki or black stilt (Himantopus novaezelandiae) has been the focus of intensive conservation management for the past 20 years. Threatened by predation and habitat loss, the population fell to as low as 23 birds before management was implemented to reverse the decline. Predator trapping has been one form of management intervention in the wild, yet despite 20 years of control, there is only limited evidence to suggest that predator trapping is beneficial for the survival of kaki. Lack of adequate experimental design and understanding of the predator-prey dynamics in the system in which kaki live appear to be the main reasons why the benefits of predator control are not consistently clear. An adaptive management approach would have provided more information on the efficacy of predator trapping and increased understanding of the inter-relationships between kaki survival and predator abundance.     

Functional conservation units for the endangered Alcon Blue butterfly Maculinea alcon in Belgium (Lepidoptera: Lycaenidae)

To organize and prioritise species-specific conservation efforts, we delineate `functional conservation units' for the threatened Alcon Blue butterfly Maculinea alcon in Belgium. We used detailed distribution data on the butterfly, its host plant and its habitat, present-day population sizes and its mobility and colonization capacity to determine functional conservation units (FCUs) on different spatial scales: FCU-1, i.e., the 12 presently occupied habitat patches plus the area within a range of 500 m surrounding them (the maximum local movement distance, based on mark-release-recapture data), FCU-2, i.e., the areas within a range of 2 km around the occupied habitat patches (the maximum observed colonization capacity) and FCU-3, i.e., potential re-introduction sites (sites where M. alcon went extinct recently). We suggest different management and planning measures for each type of functional conservation unit and discuss translocation and re-introduction as `intensive care' conservation measures for this threatened and sedentary species.