Comparison of some selection procedures and objectives in faba beans (Vicia faba L.). II. Selection for crude protein content

Summary Starting with two heterogeneous F₂ populations, each based on 20 cross combinations, different types of selection were applied for four consecutive selection cycles. Three of the selection procedures involved crude protein content (CP) and are presented in this paper. They were selection for high CP (HP), selection for low CP (LP) and independent culling levels selection for high CP and an index for seed yield per plant (ICL). For ICL-selection the attention is focussed on CP in this paper.For all three selection procedures, predicted and realized responses were calculated and expressed as percentage of a corresponding random population. The selection intensities (i) differed over selection procedures and generations. Differences in i between HP and LP within generations were mostly of minor interest. The response to HP-selection was slightly higher than to ICL-selection, but this may be due to the higher selection intensity exerted with the former method.HP-and LP-selection showed some remarkable differences, which were interpreted as a tendency towards partial dominance of high over low protein content. The total response to HP-selection gradually increased, whereas LP-selection yielded the total response largely after only one cycle of selection. The predicted response showed a tendency towards overestimation in the case of HP-selection and to underestimation in the case of LP-selection.Selection for high protein yield through CP seems to be feasible, although improvement of yield stability may eventually be more necessary. As no consistent correlation, either positive or negative, between SYP and CP could be detected, selection for either of these characters may be considerd independently of selection for the other one.     

Early determination of yield potential in arabica coffee by applying index selection

Summary Estimates of phenotypic and genotypic variances and covariances for a number of quantitative characters in arabica coffee, obtained from a variety trial in Kenya, were used to construct selection indices. The results indicated that the expected genetic advance in yield based on a selection index, containing the first two years yield and measurements of girth at base of stem and percentage bearing primaries, will be almost as large (relative efficiency 97%) as that obtained by straight selection based on 10-years yield totals. This would imply that a breeding cycle of 5 years will be sufficient for efficient selection for higher productivity in arabica coffee.     

Use of index selection in recurrent selection programs in maize

Summary Phenotypic and genotypic correlations were examined for four traits in seven populations of maize (Zea mays L.) undergoing recurrent selection. Correlations among grain yield and percentage of grain moisture, root lodging, and stalk lodging were low (|r|<0.3) except for the correlation between grain yield and stalk lodging, which was high and negative. The phenotypic and genotypic correlations agreed well from cycle to cycle within populations. Variation of correlations among populations was not significantly larger than variation among cycles. Heritabilities of these traits generally were high (h²>0.5). Two indices, one that used heritabilities as index weights and one that used relative economic weights (base index) as index weights, were compared with the Smith-Hazel index (optimim index). Relative efficiencies of the two indices, in terms of predicted gains for the individual traits and the composite trait, compared with the Smith-Hazel index, were high. The use of an index in which heritabilities were used as index weights was recommended because:1) the heritabilities were the same as the optimum weights when the traits were uncorrelated, and for the data examined the correlations were low; and 2) heritabilities were computed in routine data analyses and were available at no additional cost.Joint contribution: USDA-SEA-AR and Journal Paper No. 10152 of the Iowa Agriculture and Home Economics Exp. Stn., Ames, Iowa. Project 2194.     

Geneticanalysis of drought stress response in rapeseed (Brassica campestris and B. Napus). II. Yield improvement and the application of selection indices

Summary The expected improvement in grain yield if selection was made for plant characters measured between flowering and maturity was evaluated in populations of rapeseed (Brassica campestris and B. napus) grown in a droughted environment. Drought was commenced at flowering in each species and measurements were made on plants at the commencement of the drought stress, during the stress treatment and at crop maturity.Substantial genetic and phenotypic variation was observed in yield as well as the different morphophysiological determinants of yield. In B. campestris no single parameter was found to be a suitable alternative selection criterion to yield since the correlated responses in yield if selection was for another character was lower than if selection was for yield alone. By the use of a selection index however, joint selection for yield, as well as harvest index, 1000 seed weight and seeds per pod, was expected to be 20% more effective than direct selection for yield under drought. In the B. napus population direct selection for flowering time or for harvest index was predicted to result in a genetic advance in yield equal to or greater than that obtained by direct selection for yield, whereas joint selection for flowering time and yield should result in a 16% greater yield increase. Selection for increased yield in these populations grown in droughted conditions is discussed.     

Genetic interrelations among grain quality indicators and agronomic traits for oat

Summary Test weight, seed weight, and groat percentage are three common measures of grain quality for oat (Avena sativa L.). There is considerable disagreement, however, about the utility of each of these traits as measures of grain quality, so it is important to understand the genetic interrelations among them and between them and other agronomic traits. In this study, 50 random F2-derived F3 lines from each of 13 biparental oat crosses were evaluated. Genotypic variances, heritabilities, and genotypic correlations for test weight (TW), seed weight (SW), groat percentage (GP), grain yield (GY), harvest index (HI), plant height (PH), and date of heading (DH) were used to predict and compare direct and indirect gains from single-trait selection. Direct selection was always the most effective method for improving single traits; average predicted improvement of population means was 4% for TW, 10% for SW, 1% for GP, and 14% for GY when 10% selection intensity was applied. Genotypic correlation coefficients, averaged for all crosses, were 0.04 for TW with SW, 0.37 for TW with GP, -0.09 for SW with GP, and 0.29, 0.36, and 0.30 for GY with TW, SW, and GP, respectively. Thus, direct selection for TW, SW, or GP should not greatly affect the other two grain quality indicators. For the seven traits considered, there seemed to be no large advantage or disadvantage, in terms of correlated responses, associated with selection for any of the grain quality indicators.Contribution as Journal Paper No. J-14650 of the Iowa Agriculture and Home Economics Experiment Station, Ames, Iowa. Project No. 2447.     

Quantitative trait loci of frost tolerance and physiologically related trait in faba bean (Vicia faba L.)

In faba bean, field based winter-hardiness is a complex trait that is significantly correlated to frost tolerance. Frost tolerance could be used to indirectly select for faba bean winter-hardiness. The aim of this study was to identify putative QTL associated with frost tolerance and auxiliary traits and to quantify the efficiency of marker assisted selection. Thus, 101 recombinant inbred lines derived from the cross between two frost tolerant lines were tested for their hardened and unhardened frost tolerance and for their leaf fatty acid content in both treatments. Significant differences among the RIL were observed for all studied traits. For frost tolerance, five putative QTL were detected; three for unhardened frost tolerance that explained 40.7% (8.6% after cross-validation, CV) of its genotypic variance and two for hardened frost tolerance that explained 21.8% (1.0% after CV). For fatty acid content, three QTL were detected for oleic acid content in unhardened leaves that explained 62.9% (40.6% after CV) of its genotypic variance. This fatty acid was significantly correlated with unhardened frost tolerance. The unbiased genotypic variance explained enabled to draw realistic prospects of MAS for frost tolerance. In this study, combined MAS was more efficient than classical phenotypic selection and was expected to be higher on larger populations at early generations. Moreover, favourable alleles inherited from the exotic line BPL 4628 could be introgressed to European winter-hardy beans for further improvement.     

Single and Multiple Traits Selection in a Segregating Population of Wheat, Triticum aestivum L.

The breeding materials used in this study were the F₃, F₄ and F₅-generations of the cross between Giza 158 × Sonora 64 (Triticum aestivum L.). The objective of this study was to compare the relative merits of Smith-Hazel, desired gain selection indices, independent culling levels and single trait selection in improving grain yield, heading date and several agronomic traits. Highly significant differences among F₃ families and a satisfactory genotypic coefficient of variability were obtained for all the traits studied. The genotypic correlations were high between yield and each of spike weight, kernels/spike and spikes; plant, intermediate with 1000 kernel weight and very low with heading date, plant height and spike1 length-After two cycles of selection, the results of the gains realized indicated that the most effective method for improving yield was the Smith-Hazel index (SH₇) of seven traits followed by the desired gain index of seven traits (DG₇), SH₅, independent culling levels, DG₅ and direct selection (or grain yield/plant. Direct selection for heading date, plant height and spike length was the best method for improving these traits, but undesirable correlated responses in the other traits were obtained.     

Response of a new IR50/Moroberekan recombinant inbred population of rice (Oryza sativa L.) from an indica × japonica cross for growth and yield traits under aerobic conditions

Genetic variability, correlation, path coefficient analysis and test of normality was conducted in an F₈ recombinant inbred aerobic rice population developed by single seed descent method to evaluate its potential as a mapping population. Estimates of genotypic variance, phenotypic variance, genotypic coefficient of variance (GCV), phenotypic coefficient of variance (PCV), heritability in the broad sense (H) and expected genetic advance at 5% selection index (GA) for grain yield and other attributing characters were computed. In all the cases, PCV was higher than GCV indicating the influence of environment on the characters. High heritability coupled with high GA was observed for several plant traits; number of tillers, plant height, total number of spikelets panicle⁻¹, biomass plant⁻¹, straw weight, harvest index and grain yield plant⁻¹ and hence offered good scope for selection. Grain yield plant⁻¹ was found to be positively correlated with plant height, number of tillers, panicle length, panicle exsertion, number of panicles plant⁻¹, single panicle weight, test weight, number of fertile spikelets panicle⁻¹, straw weight, biomass plant⁻¹, harvest index and grain breadth both at genotypic and phenotypic levels. Harvest index exerted maximum positive direct effect, followed by biomass plant⁻¹ and straw weight on grain yield plant⁻¹ at phenotypic level. Shapiro-Wilks “W test of normality” indicated that the population was skewed towards female parent IR50 for some traits and for some others towards Moroberekan, the male parent. Most of the characters that showed skewness were platykurtic with a kurtosis value of less than 3.     

Estimates of selection parameters associated with harvest index in oat lines derived from a bulk population

Summary Harvest index of grain crops is defined as grain yield divided by total plant yield. We estimated the heritability percentages of harvest index and its components, grain yield and plant weight, the genotypic and phenotypic correlations among these three traits, and the genotypic correlations of harvest index with plant height, 100-seed weight, grain number, and heading date by using a population of 1200 F₉-derived oat lines tested in six environments. Furthermore, we examined the relative selection efficiencies of indirect selection for yield through harvest index and of index selection for yield through yield plus harvest index.Heritability percentages were computed by use of variance-component, standard-unit, and realizedheritability methods. The heritability percentages for harvest index, grain yield, and plant weight were similar, and averaged between 50 and 65 precent across environments. Standard-unit and realized heritability percentages agreed closely and generally were lower than those computed via the variance-component method. Expected heritability percentages for harvest index calculated by using grain and plant yield data agreed almost exactly with actual values. Genotypic correlations were 0.88 between grain yield and plant weight, 0.42 between harvest index and grain yield, and –0.07 between harvest index and plant weight. Genotypic and phenotipic correlations were similar in magnitude. Theoretical and actual genotypic and phenotypic correlations of harvest index with grain yield and plant weight agreed closely. Genotypic correlations, computed via parent-offspring relationships, between harvest index and plant height, 100-seed weight, grain number, and heading date averaged –0.41, 0.43, 0.00, and –0.33 respectively.Indirect selection for grain yield through harvest index was 43 percent as efficient as direct selection, and a selection index that combined harvest index and grain yield was no more efficient than direct selection for yield. Harvest index had little value as a selection criterion for grain yield improvement when unrestricted selection was used. Indirect selection for grain yield through harvest index, however, would be expected to retain lines with a more favorable combination of yield, plant height and heading date than would unrestricted direct selection for yield.Journal Paper No. J-7914 of the Iowa Agriculture and Home Economic Experiment Station, Ames, Iowa 50010, Project No. 1752.     

The effect of skewness on selection in a plant breeding program

Summary The distribution of many plant characters is skewed. The standard formula for the expected gain from selection is based on the assumption that the character value is the sum of two independent normal variables, one genetic and the other environmental. If the genetic variable is normal, but the environmental variable has a positively skewed distribution, then upwards selection will give a lower gain than that expected if both distributions are normal. If the distribution of the environmental variable is negatively skewed, then upwards selection will give a larger than expected gain. Of course, with downwards selection, the results will be reversed. This leads to asymmetry of response if both upwards and downwards selection are used. In cases where unexpected responses to selection are obtained and normality of the character distribution has been assumed, skewness of the data should be checked as possible cause.     

Correlated response to recurrent selection for groat-oil content in oats

Summary One hundred random oat (Avena sativa L.) lines from a base (C₀) and each of three populations (C₁, C₂, and C₃) improved for groat (caryopsis) oil content by phenotypic recurrent selection were evaluated for correlated changes in several unselected agronomic traits. In addition, the parents of the base population and four check varieties were evaluated for the same traits. Phenotypic recurrent selection for high groat-oil content resulted in no significant correlated response in mean expression of any trait. Mean grain yield, biomass, groat yield, and harvest index of the improved populations were equal or superior to the mean of the parents and, with the exception of harvest index, equivalent to the mean of the check varieties. Mean test weight and seed weight of all populations were lower than for parents or check varieties. Selection for high groat-oil content caused a decline in genotypic variance for test weight and groat fraction, but reductions in genotypic variance for heading date and plant height may have resulted from culling for good agronomic type. Broad-sense heritability remained moderate to high for all traits except groat fraction. Phenotypic and genotypic correlation coefficients revealed negative, though mostly nonsignificant, relationships between groat-oil content and several traits, which may reflect a purported bioenergetic limitation to increasing groat-oil content in oats. Oil yield, however, was positively correlated with grain and groat yield, groat fraction, biomass, and harvest index. Results suggest that development of high-oil oat cultivars with current levels of production traits via phenotypic recurrent selection is possible.Journal Paper no. J-13038 of the Iowa Agric. and Home Econ. Exp. Stn., Ames, IA 50011. Project 2447.     

Single plant selection for yield in lentil

Summary Individual plant selection for yield in lentil is problematic at a commercial crop density primarily because of inter-plant entanglement by tendrils. Visual plant selection for yield was compared with random selection in the F₅ at three plant densities (66, 133 and 200 seeds/m²) by an evaluation of F₇ progeny yields over two seasons in two populations of lentil. Random plant sampling was as effective as visual plant selection in isolating high-yielding F₇ lines. The plant density of the selection environment did not affect the response to selection. The correlations between the seed number of selected F₅ plants and the mean yield of their F₇ progenies were r=+–0.26 and –0.06 in two populations, indicating the lack of positive response to plant selection for seed number. The results show that 1) random sampling is the most economic of the methods tested of plant selection for yield and 2) the plant density of the environment for plant selection can be low enough to avoid inter-plant entanglement by tendrils, allowing a focus in plant selection on characters, other than yield, of importance to the breeding program and with a higher heritability than yield.     

Feasibility of selection for traits associated with cold tolerance in rice under rapid generation advance method

Summary Variability of the hybrid population can be preserved through generations during the process of rapid generation advance (RGA). Effective selection can be done in an early generation for those traits having high heritability value like growth duration and plant height. But selection is not advantageous for traits having low heritability. Thus, selection for panicle exsertion, cold tolerance at seedling stage and panicle length would not be wise during the early generations. However, in the low temperature areas growth duration and plant height are two important factors which determine varietal suitability. As selection of these two characters are possible through RGA, it should be a standard parctice during RGA to eliminate the plants with long growth duration and select plants with optimum plant height.     

Nondestructive and Rapid Leaf Measurements for Use as Selection Criteria in Vicia faba L.*

Four Vicia faba F₂ populations were studied to identify leaf characters that can be scored precisely at low cost and cause minimal disturbance to the plant during the leaf scoring in a selection program to change leaf canopy architecture. From correlation and biometrical analyses, involving eight measurements of leaflet and rachis characters, it was ascertained that the area index (length × width) of the first basal leaflet and the total rachis length of the leaf on the 5th flowering node, were the most informative, rapidly, and nondestructively determined leaf characters serving- the above-men tinned requirements.     

Correlated Responses in Two Traits when Selection is Practised on their Ratio

In many fields of application in plant breeding and crop science, ratios of two component traits X and Y are of interest (harvest index in cereals, leaf-to-stem ratio in forage legumes, height-to-diameter ratio in forest trees etc.). When selection is practised on the ratio X/Y of two traits X and Y, the experimenter may be interested in the resulting changes of both trait means. Based on improved approximations for the covariances between X and X/Y and between Y and X/Y and for the variance of X/Y the changes in the means of X and Y can be predicted by applying the regression approach from conventional selection theory. Explicit expressions for these correlated responses in X and Y when selection is practised on their ratio X/Y are derived and discussed. The different outcomes (decrease, zero change or increase) for the selection pressures on X and Y are characterized by phenotypic coefficients of variation of X and Y, phenotypic and genotypic correlations between X and Y and heritabilities of X and Y.     

Accelerated pedigree selection: An alternative to individual plant selection in the normal pedigree breeding method in the self-pollinated cereals

Summary Accelerated pedigree selection (APS) involves initial selection based on the assessment of lines rather than individual plants. These lines can be derived by accelerated generation procedures. Unlike single seed descent (SSD), line selection can begin in an early generation. This minimises the risk of differential mortality or sterility. Brief outlines of APS for spring and winter cereals are given. The length of the APS breeding cycle is shorter than that of either pedigree selection (PS) or SSD. In addition to higher efficiency of selection for yield, which must be offset against the need for greater resources, it is expected that APS should result in valuable genotypes being retained and better selection for desirable combinations of characters.     

Effectiveness of in vitro selection for agronomic characters in potato

Effectiveness of in vitro selection for agronomic characters was studied by finding correlation coefficients between in vitro and in vivo performance of 22 potato genotypes. Evaluation was performed under eight in vitro and two in vivo conditions. Genotypic differences were highly significant for various characters under all in vitro and in vivo conditions. Error mean squares were much lower in in vitro experiments than in in vivo experiments. In vitro selection was found to be highly effective for tuber colour, stem pigment and number of eyes, and moderately effective for average tuber weight, plant vigour and foliage senescence under specific conditions. The results also indicated the possibility of in vitro selection for heat tolerance. For tuber yield and number of tubers, effectiveness of in vitro selection was low to very low, because differences in phenotypic expressions of genotypes were much enlarged under in vitro conditions compared to under in vivo conditions. Correlation coefficients for certain characters were better when in vitro conditions were closer to in vivo conditions. To improve the efficiency of in vitro selection, there is perhaps a need to simulate and identify the in vitro conditions under which genotypic differences are reflected in phenotypes more realistically as they are expressed under in vivo conditions. This revised version was published online in August 2006 with corrections to the Cover Date.     

Multistage selection indices for maximum genetic gain and economic efficiency in red clover

Selection index updating, a method of multistage selection, allows breeders to determine the optimal truncation point of each stage so that the aggregate genetic gain (▵H) or the gain to cost ratio (▵H/C) is maximum. In this study, we demonstrated the use of selection index updating on selection of red clover (Trifolium pratense L.). We determined the optimal selection schemes that optimized the balance between cost saving and lowered genetic gain in multistage selection. A total of 78 red clover half-sib families were evaluated for petiole length (PL), seedling vigor (Vig) measured at the seedling stage, and canopy height and individual plant dry weight recorded on initial growth (CH1 and DW1) and regrowth (CH2 and DW2). Alternative selection schemes with different number of stages, traits, and proportions selected at various stages were examined to maximize either ▵H or ▵H/C. Single stage index selection had a greater predicted genetic gain than multistage selection, but it was also associated with higher costs. Early culling at the seedling stage resulted in significant cost savings and increased gain to cost ratio. The ratio was 9.857 or more with early culling and 3.062 or less without seedling selection. The most efficient selection programs consisted of PL, Vig, DW1, and DW2. Inclusion of CH1 and CH2 into the selection indices did not contribute to the increase of the total genetic gain, nor to the increase of the ratio. This revised version was published online in July 2006 with corrections to the Cover Date.     

Effectiveness of selection at microtuber crop level in potato

Correlation coefficients were computed between microtuber crops and normal seed crop in order to study the selection efficiency for agronomic characters in potato at microtuber crop level. Two types of microtuber, green and white, were produced by inducing microtuberization under light and dark conditions, respectively. Genotypic differences were significant for various characters in both microtuber and normal seed crops. Green and white microtubers were equally useful for selection, judging by the crops raised from them. Selection at microtuber crop level was found to be highly effective for plant height, stem habit, tuber colour and general impression, and moderately effective for internode length, leaf length, leaflet width, stem pigment, plant vigour and tuber shape. Selection efficiency was low for tuber yield, tuber number, average tuber weight, number of nodes, number of stems, leaf colour and number of eyes. The implications of these results for potato breeding and germplasm evaluation programmes are discussed and a procedure for selecting superior genotypes at microtuber crop level is outlined.     

Variability of Yield Characters and Selection in Solanum ladniatum Ait.

The steroid bearing medicinal plant, S. laciniatum, was bred for high solasodine yield for commercial cultivation in Thailand. Starting materials for breeding consisted of seven populations of different origin. Variability among these populations was examined using an unselected control population cultivated over three years. Additive and dominance variance were estimated from a polycross and diallel mating design. Significant genotypic variability was found for solasodine concentration, height of the plants, and total shoot length, promising successful selection for the most important yield characters. Additive variance and heritability in the narrow sense were low for all yield characters, due to previous selection of the parental plants used for the polycross and diallel mating. No dominance effects could be found for any of the characters. In conclusion, breeding S. laciniatum for quantitative yield characters by selection will be superior to hybrid breeding. As a result of selection, significant increases in the most important yield characters in the offspring of selected populations were obtained.