Do the impacts of alien invasive plants differ from expansive native ones? An experimental study on arbuscular mycorrhizal fungi communities

No studies have compared so far the effects of alien invasive and expansive native (widespread, mono-dominant) plants on arbuscular mycorrhizal fungi (AMF). Four global or European most successful invaders (Impatiens glandulifera, Reynoutria japonica, Rudbeckia laciniata, Solidago gigantea) and two expansive plants native to Europe (Artemisia vulgaris, Phalaris arundinacea) were grown in pots to elucidate the magnitude and direction of changes in AMF abundance, species richness, and species composition in soils from under multispecies native vegetation. In a second stage, the effects of these changes on a native plant, Plantago lanceolata, were assessed. Plant species identity had larger impact on AMF abundance, species richness, and species composition as well as on P. lanceolata than origin of the species (alien vs. native). This could be due to the character of AMF relationships with the plants, i.e., their mycorrhizal status and dependency on AMF. However, the alterations induced by the plant species in soil chemical properties rather than in AMF community were the major drivers of differences in shoot mass and photosynthetic performance of P. lanceolata. We determined that the plants produced species-specific effects on soil properties that, in turn, resulted in species-specific soil feedbacks on the native plant. These effects were not consistent within groups of invaders or natives.     

Taxon-specific responses of soil microbial communities to different soil priming effects induced by addition of plant residues and their biochars

Purpose

This work investigated changes in priming effects and the taxonomy of soil microbial communities after being amended with plant feedstock and its corresponding biochar.

Materials and methods

A soil incubation was conducted for 180 days to monitor the mineralization and evolution of soil-primed C after addition of maize and its biochar pyrolysed at 450 °C. Responses of individual microbial taxa were identified and compared using the next-generation sequencing method.

Results and discussion

Cumulative CO₂ showed similar trends but different magnitudes in soil supplied with feedstock and its biochar. Feedstock addition resulted in a positive priming effect of 1999 mg C kg^?1 soil (+253.7 %) while biochar gave negative primed C of ?872.1 mg C kg^?1 soil (?254.3 %). Linear relationships between mineralized material and mineralized soil C were detected. Most priming occurred in the first 15 days, indicating co-metabolism. Differences in priming may be explained by differences in properties of plant material, especially the water-extractable organic C. Predominant phyla were affiliated to Acidobacteria, Actinobacteria, Chloroflexi, Gemmatimonadetes, Firmicutes, Planctomycetes, Proteobacteria, Verrucomicrobia, Ascomycota, Basidiomycota, Blastocladiomycota, Chytridiomycota, Zygomycota, Euryarchaeota, and Thaumarchaeota during decomposition. Cluster analysis resulted in separate phylogenetic grouping of feedstock and biochar. Bacteria (Acidobacteria, Firmicutes, Gemmatimonadetes, Planctomycetes), fungi (Ascomycota), and archaea (Euryarchaeota) were closely correlated to primed soil C (R ²?=??0.98, ?0.99, 0.84, 0.81, 0.91, and 0.91, respectively).

Conclusions

Quality of plant materials (especially labile C) shifted microbial community (specific microbial taxa) responses, resulting in a distinctive priming intensity, giving a better understanding of the functional role of soil microbial community as an important driver of priming effect.

     

Combined biochar and nitrogen fertilizer reduces soil acidity and promotes nutrient use efficiency by soybean crop

Purpose

Soil acidification is universal in soybean-growing fields. The aim of our research was to evaluate the effects of soil additives (N fertilizers and biochar) on crop performance and soil quality with specific emphasis on ameliorating soil acidity.

Materials and methods

Four nitrogen treatments were applied as follows: no nitrogen (N0), urea (N1), potassium nitrate (N2), and ammonium sulfate (N3), each providing 30 kg N ha^?1. Half plot area of the N1, N2, and N3 treatments was also treated with biochar (19.5 t ha^?1) to form N-biochar treatments (N1C, N2C, N3C). Both bulk and rhizosphere soils were sampled separately for the following analyses: pH, exchangeable base cations (EBC), exchangeable acidity (EA), total inorganic N (IN), total N (TN), and microbial phospholipid fatty acids (PLFAs). Soybean biomass and nutrient contents were also determined. Correlation analysis was applied to analyze the relationships between soil chemical properties and soybean plant parameters.

Results and discussion

With N-biochar additions (N1C, N2C, N3C), soil chemical properties changed as follows: pH increased by 0.6–1.2 units, EBC, IN, and TN increased by 175–419, 38.5–54.7, and 136–452 mg kg^?1, respectively, and PLFAs increased by 23.6–40.9 nmol g^?1 compared to the N0 in the rhizosphere. Microbial PLFAs had positive correlations with soil pH; EBC; exchangeable K, Ca, Na, and Mg; TN; IN; NH₄ ⁺; and NO₃ ^? (r?=?0.66–0.84, p?<?0.01). There were negative correlations between PLFAs and EA or exchangeable Al (r?=??0.64, ?0.66, p?<?0.01), which indicated that the additives increased microbial biomass by providing a suitable environment with less acid stress and more nutrients. The additives increased soil NH₄ ⁺ and NO₃ ^? by promoting soil organic N mineralization and reducing NH₄ ⁺ and NO₃ ^? leaching. Moreover, the soybean seed biomass and the nutrient contents in seeds increased with N-biochar additions, especially in the N3C treatment.

Conclusions

N-biochar additions were effective in ameliorating soil acidity, which improved the microenvironment for more microbial survival. N-biochars influenced N transformations at the plant–soil interface by increasing organic N mineralization, reducing N leaching, and promoting N uptake by soybeans. The soil additive ammonium and biochar (N3C) were best in promoting soybean growth.

     

Temporal variations of soil respiration at multiple timescales in a spruce-fir valley forest,northeastern China

Purpose

There is a paucity of data regarding the multiple timescale variations of heterotrophic respiration (R _H) and autotrophic respiration (R _A) as well as the primary controlling factors. The objective of this study is to find the temporal variations of total soil respiration (R _S) and its components, revealing the driving factors at different timescales.

Materials and methods

A trenching method was used to distinguish R _S, R _H, and R _A in a spruce-fir valley forest in northeastern China. We used the closed dynamic chamber method to measure the soil respiration rate. Analyses of R _S, R _H, and R _A in relation to biotic and abiotic factors were conducted to realize the temporal variations at different timescales.

Results and discussion

Only R _S and R _H showed a distinct diurnal variation and soil temperature (T _S) can explain 68 and 59 % of the daily variation, respectively. R _S, R _H, and R _A showed a pronounced, single peak curve seasonally, and T _S can explain 11–95 % of the seasonal variation. Soil moisture (W _S) maintained at a relatively high level and was not related to R _S, R _H, or R _A on a seasonal scale, and there was no significant relationship between the seasonal R _S, R _A, and root biomass. However, for 5 years, only the mean R _A of the growing season was significantly related to the mean W _S, which can explain 39 % of the inter-annual variation of R _A. The annual variations of litterfall and the relative growth rate of stems were not related to R _S, R _H, or R _A. The contribution of R _H to R _S was larger, and the temperature sensitivity was 2.01–3.71 for R _S, 1.90–3.08 for R _H, and 2.20–5.65 for R _A.

Conclusions

R _S, R _H, and R _A show different temporal variations at multiple timescales. When W _S is not restricted, T _S is the primary driving factor of daily and seasonal variation of R _S and R _H. In this site, R _H accounts for a large proportion of R _S and plays a crucial role in determining the magnitude and temporal variation of R _S.

     

Spatial variation of soil respiration in a coastal protection forest in southeastern China

Purpose

Forest soil respiration is an important component of global carbon budgets, but its spatial variation is inadequately understood. This research aimed to measure soil respiration (R _s), soil water content (M _s-5), soil temperature (T), and carbon dioxide (M _co2) in a coastal protection forest (CPF), which is one kind of man-made forests designed for coastal protection primarily along the coast in China, to determine the relationships among them, and to analyze their spatial distributions in a small scale.

Materials and methods

We measured R _s, M _s-5, T, and M _co2 of 100 plots in an approximately flat grid (totally 4 hm²) by LI-8100A in a Casuarina equisetifolia L. forest on a state-owned forest farm of 326 hm² in SE China. Traditional statistics and geo-statistics including semivariance, Moran’s I index, and fractal dimension were used to analyze data.

Results and discussion

Key findings were that (1) the spatial mean of R _s, M _s-5, T, and M _co2 were 1.194 μmol m^?2 s^?1, 11.387 mmol mol^?1, 14.153 °C, and 407.716 ppm, respectively, in the forest; (2) the relationship between soil respiration and the other three factors was weak, while M _s-5, T, and M _co2 have strong relationships with each other; and (3) the four factors, especially soil respiration, had strong autocorrelation within given limits and showed great heterogeneity with 95 % confidence intervals around the means in the study area, all of which can provide important value for the study of carbon cycling and for the sustainable management of coastal protection forests.

Conclusions

According to geo-statistical analysis and field investigations, soil respiration in the coastal forest is less than in some broad-leaf forests but higher than in some conifers. Strong heterogeneity and autocorrelation are clear; however, its relation with other three factors is weak. CPF is a considerable potential forest for carbon conservation if it is well managed.

     

Abundance of transcripts of functional gene reflects the inverse relationship between CH<Subscript>4</Subscript> and N<Subscript>2</Subscript>O emissions during mid-season drainage in acidic paddy soil

Agricultural management significantly affects methane (CH₄) and nitrous oxide (N₂O) emissions from paddy fields. However, little is known about the underlying microbiological mechanism. Field experiment was conducted to investigate the effect of the water regime and straw incorporation on CH₄ and N₂O emissions and soil properties. Quantitative PCR was applied to measure the abundance of soil methanogens, methane-oxidising bacteria, nitrifiers, and denitrifiers according to DNA and mRNA expression levels of microbial genes, including mcrA, pmoA, amoA, and nirK/nirS/nosZ. Field trials showed that the CH₄ and N₂O flux rates were negatively correlated with each other, and N₂O emissions were far lower than CH₄ emissions. Drainage and straw incorporation affected functional gene abundance through altered soil environment. The present (DNA-level) gene abundances of amoA, nosZ, and mcrA were higher with straw incorporation than those without straw incorporation, and they were positively correlated with high concentrations of soil exchangeable NH₄⁺ and dissolved organic carbon. The active (mRNA-level) gene abundance of mcrA was lower in the drainage treatment than in continuous flooding, which was negatively correlated with soil redox potential (Eh). The CH₄ flux rate was significantly and positively correlated with active mcrA abundance but negatively correlated with Eh. The N₂O flux rate was significantly and positively correlated with present and active nirS abundance and positively correlated with soil Eh. Thus, we demonstrated that active gene abundance, such as of mcrA for CH₄ and nirS for N₂O, reflects the contradictory relationship between CH₄ and N₂O emissions regulated by soil Eh in acidic paddy soils.     

Accumulation and phytoremediation of Pb,Zn, and Ag by plants growing on Koshk lead–zinc mining area,Iran

Purpose

This study investigated the extent of metal accumulation by plants colonizing a mining area in Yazd Province in Central Iran. It also investigated the suitability of these plants for phytoextraction and phytostabilization as two potential phytoremediation strategies.

Materials and methods

Plants with a high bioconcentration factor (BCF) and low translocation factor (TF) have the potential for phytostabilization, whereas plants with both BCFs and TFs >1 may be appropriate for phytoextraction. In this study, both shoots and roots of 40 plant species and associated soil samples were collected and analyzed for total concentrations of trace elements (Pb, Zn, and Ag). BCFs and TFs were calculated for each element.

Results and discussion

Nonnea persica, Achillea wilhelmsii, Erodium cicutarium, and Mentha longifolia were found to be the most suitable species for phytostabilization of Pb and Zn. Colchicum schimperi, Londesia eriantha, Lallemantia royleana, Bromus tectorum, Hordeum glaucum, and Thuspeinantha persica are the most promising species for element phytoextraction in sites slightly enriched by Ag. Ferula assa-foetida is the most suitable species for phytostabilization of the three studied metals. C. schimperi, L. eriantha, L. royleana, B. tectorum, M. longifolia, and T. persica accumulated Ag, albeit at low level.

Conclusions

Our preliminary study shows that some native plant species growing on this contaminated site may have potential for phytoremediation.

     

Assessing the potential of using biochar in mine rehabilitation under elevated atmospheric CO<Subscript>2</Subscript> concentration

Purpose

Re-establishment of soil nitrogen (N) capital is a priority in mine rehabilitation. We aimed to evaluate the effects of biochar addition on improving mine spoil N pools and the influence of elevated CO₂ concentration on mine rehabilitation.

Materials and methods

We assessed the effects of pinewood biochar, produced at three temperatures (650, 750 and 850 °C, referred as B₆₅₀, B₇₅₀ and B₈₅₀, respectively), on mine spoil total N concentrations with five different plant species, including a tree species (Eucalyptus crebra), N-fixing shrubs (Acacia floribunda and Allocasuarina littoralis) and C₃ and C₄ grasses (Austrodanthonia tenuior and Themeda australis) incubated at ambient (400 μL L^?1) and elevated (700 μL L^?1) atmospheric CO₂ concentrations, as well as the effects of elevated CO₂ on mine rehabilitation.

Results and discussion

Soil total N significantly improved following biochar incorporation under all plant species (P < 0.05) except for T. Australis. E. crebra had the highest soil total N (0.197%, 0.198% and 0.212% for B₆₅₀, B₇₅₀ and B₈₅₀, respectively). Different from the negligible influence of elevated CO₂ on soil properties under the grasses and the N-fixing shrubs, elevated CO₂ significantly increased soil water and hot water extractable organic C (WEOC and HWEOC, respectively) and decreased total C under E. crebra, indicating that the nutrient demands were not met.

Conclusions

Biochar addition showed the potential in mine rehabilitation in terms of improving soil N pool, especially with E. crebra. However, it would be more difficulty to rehabilitate mine spoils in future with the rising atmospheric CO₂ concentration.

     

Predicting soil loss in central and south Italy with a single USLE-MM model

Purpose

The USLE-MM estimates event normalized plot soil loss, A_e,N, by an erosivity term given by the runoff coefficient, Q_R, times the single-storm erosion index, EI₃₀, raised to an exponent b₁?>?1. This modeling scheme is based on an expected power relationship, with an exponent greater than one, between event sediment concentration, C_e, and the EI₃₀/P_e (P_e = rainfall depth) term. In this investigation, carried out at the three experimental sites of Bagnara, Masse, and Sparacia, in Italy; the soundness of the USLE-MM scheme was tested.

Materials and methods

A total of 1192 (A_e,N, Q_REI₃₀) data pairs were used to parameterize the model both locally and considering all sites simultaneously. The performances of the fitted models were established by considering all erosive events and also by distinguishing between events of different severity.

Results and discussion

The b₁ exponent varied widely among the three sites (1.05–1.44) but using a common exponent (1.18) for these sites was possible. The A_e,N prediction accuracy increased in the passage from the smallest erosion events (A_e,N?≤?1 Mg ha^?1, median error =?3.35) to the largest ones (A_e,N?>?10 Mg ha^?1, median error =?1.72). The Q_REI₃₀ term was found to be usable to predict both A_e,N and the expected maximum uncertainty of this prediction. Soil erodibility was found to be mainly controlled by the largest erosion events.

Conclusions

Development of a single USLE-MM model appears possible. Sampling other sites is advisable to develop a single USLE-MM model for a general use.

     

Factors controlling soil microbial respiration during the growing season in a mature larch plantation in Northern Japan

Purpose

Soil microbes contribute significantly to soil respiration (SR) in boreal forests; however, there is limited knowledge on microbial contributions from long field investigations. The objective of this study was to estimate soil microbial respiration, as well as its primary controlling factors, for a period of three consecutive years.

Materials and methods

A trenching method was used to distinguish soil microbial respiration (R _Mic) in a 55-year-old mature Japanese larch (Larix kaempferi) plantation in Northern Japan; the soil in which developed originally from volcanic soils containing pumice. We used a portable CO₂ detection system to measure the soil respiration rate during the growing season. Environmental factors, soil physiochemical characteristics, and soil microbial biomass carbon and nitrogen (MBC and MBN) were analyzed to explain the seasonal variations of SR and R _Mic.

Results and discussion

The results showed that the estimated contribution of soil microbes to SR was 78, 62, and 55% during the three successive years, respectively. Respiration attributable to decomposition of aboveground litter contributed approximately 19% to SR. The major environmental factor that affected R _Mic was soil temperature at 5 cm depth, which accounted for more than 70% of the seasonal variation in R _Mic observed. There were close relations among MBC, MBN, and soil water content, but the soil water content showed no significant relation with R _Mic.

Conclusions

The R _Mic to SR varied from 78 to 55% following 3 years of trenching treatments. Our results demonstrated the important role of soil microbes on soil respiration in this larch forest. Soil temperature was the major positive factor that influenced R _Mic, while soil water content had no significant effect. Global warming will increase the loss of C into the atmosphere by increasing the R _Mic, and could accelerate climate change.

     

Interactive effects of biochar addition and elevated carbon dioxide concentration on soil carbon and nitrogen pools in mine spoil

Purpose

This study aimed to assess the effects of biochar on improving nitrogen (N) pools in mine spoil and examine the effects of elevated CO₂ on soil carbon (C) storage.

Materials and methods

The experiment consisted of three plant species (Austrostipa ramossissima, Dichelachne micrantha, and Lomandra longifolia) planted in the N-poor mine spoil with application of biochar produced at three temperatures (650, 750, and 850 °C) under both ambient (400 μL L^?1) and elevated (700 μL L^?1) CO₂. We assessed mine spoil total C and N concentrations and stable C and N isotope compositions (δ¹³C and δ¹⁵N), as well as hot water extractable organic C (HWEOC) and total N (HWETN) concentrations.

Results and discussion

Soil total N significantly increased following biochar application across all species. Elevated CO₂ induced soil C loss for A. ramossissima and D. micrantha without biochar application and D. micrantha with the application of biochar produced at 750 °C. In contrast, elevated CO₂ exhibited no significant effect on soil total C for A. littoralis, D. micrantha, or L. longifolia under any other biochar treatments.

Conclusions

Biochar application is a promising means to improve N retention and thus, reduce environmentally harmful N fluxes in mine spoil. However, elevated CO₂ exhibited no significant effects on increasing soil total C, which indicated that mine spoil has limited potential to store rising atmospheric CO₂.

     

Distinct effect of nitrogen fertilisation and soil depth on nitrous oxide emissions and nitrifiers and denitrifiers abundance

The nitrous oxide and molecular N emissions from 5-cm length subsamples taken from 20-cm length sample corers containing eutric Cambisol soil fertilised either with urea, ammonium or nitrate for 1 year have been examined using gas chromatography. At the beginning of the incubation, the same N rate (260 kg N/ha) was added to the soil and kept constant during the experiment. The total abundance of the soil Bacteria and Archaea and that of nitrifiers and denitrifiers was estimated by quantitative PCR of the corresponding biotic variables 16S rRNA, amoA and napA, narG, nirK, nirS, norB, nosZI and nosZII genes. The abiotic variables dissolved oxygen, pH, exchangeable NH₄⁺-N and NO₃^?-N contents and total C and total N were also analysed. None of the three fertilisers affected the total abundance of Bacteria and Archaea and nitrification was the main driver of nitrous oxide production in the 0- to 5-cm and 5- to 10-cm soil layers while denitrification was in the 10- to 15-cm and 15- to 20-cm soil horizons. Parallel to the reduction in the content of dissolved oxygen along the soil profile, there was a decrease in the total and relative abundance of the bacterial and archaeal amoA gene and an increase in the abundances of the denitrification genes, mainly in the 10- to 15-cm and 15- to 20-cm soil layers. A non-metric multidimensional scaling plot comparing the biotic and abiotic variables examined in each of the four 5-cm soil subsamples and the whole 20-cm sample showed a disparate effect of N fertilisation on N gas emissions and abundance of nitrifiers and denitrifiers bacterial and archaeal communities.     

Effects of saline water irrigation and fertilization regimes on soil microbial metabolic activity

Purpose

Irrigation and fertilization can change soil environment, which thereby influence soil microbial metabolic activity (MMA). How to alleviate the adverse effects by taking judicious saline water irrigation and fertilization regimes is mainly concerned in this research.

Materials and methods

Here, we conducted a field orthogonal designed test under different saline water irrigation amount, water salinity, and nitrogen fertilizer application. The metabolic profiles of soil microbial communities were analyzed by using the Biolog method.

Results and discussion

The results demonstrated that irrigation amount and fertilizer application could significantly change MMA while irrigation water salinity had no significant effect on it. Medium irrigation amount (30 mm), least (50 kg ha^?1) or medium (350 kg ha^?1) N fertilizer application, and whatever irrigation water salinity could obtain the optimal MMA. Different utilization rates of carbohydrates, amino acids, carboxylic acids, and polymers by soil microbial communities caused the differences of the effects, and D-galactonic acid γ-lactone, L-arginine, L-asparagine, D-glucosaminic acid, Tween 80, L-threonine, and D-galacturonic acid were the indicator for distinguishing the effects.

Conclusions

The results presented here demonstrated that by regulating irrigation water amount and fertilizer application, the effects of irrigation salinity on MMA could be alleviated, which offered an efficient approach for guiding saline water irrigation.

     

Effects of vermicompost amendment as a basal fertilizer on soil properties and cucumber yield and quality under continuous cropping conditions in a greenhouse

Purpose

We examined the effects of vermicompost application as a basal fertilizer on the properties of a sandy loam soil used for growing cucumbers under continuous cropping conditions when compared to inorganic or organic fertilizers.

Materials and methods

A commercial cucumber (Cucumis sativus L.) variety was grown on sandy loam soil under four soil amendment conditions: inorganic compound fertilizer (750 kg/ha,), replacement of 150 kg/ha of inorganic compound fertilizer with 3000 kg/ha of organic fertilizer or vermicompost, and untreated control. Experiments were conducted in a greenhouse for 4 years, and continuous planting resulted in seven cucumber crops. The yield and quality of cucumber fruits, basic physical and chemical properties of soil, soil nutrient characteristics, and the soil fungal community structure were measured and evaluated.

Results and discussion

Continuous cucumber cropping decreased soil pH and increased electrical conductivity. However, application of vermicompost significantly improved several soil characteristics and induced a significant change in the rhizosphere soil fungal community compared to the other treatments. Notably, the vermicompost amendments resulted in an increase in the relative abundance of Ascomycota, Chytridiomycota, Sordariomycetes, Eurotiomycetes, and Saccharomycetes, and a decrease in Glomeromycota, Zygomycota, Dothideomycetes, Agaricomycetes, and Incertae sedis. Compared to the organic fertilizer treatment, vermicompost amendment increased the relative abundance of beneficial fungi and decreased those of pathogenic fungi. Cucumber fruit yield decreased yearly under continuous cropping conditions, but both inorganic and organic fertilizer amendments increased yields. Vermicompost amendment maintained higher fruit yield and quality under continuous cropping conditions.

Conclusions

Continuous cropping decreased cucumber yield in a greenhouse, but basic fertilizer amendment reduced this decline. Moreover, basal fertilizer amendment decreased beneficial and pathogenic fungi, and the use of vermicompost amendment in the basic fertilizer had a positive effect on the health of the soil fungal community.

     

Soil quality assessment under different <Emphasis Type="Italic">Paulownia fortunei</Emphasis> plantations in mid-subtropical China

Purpose

Paulownia, one of the fastest growing broad-leaved tree species in the world, is widely distributed in the warm temperate regions of China. However, there are few commercial-scale Paulownia plantations, and there is only limited information available about the most suitable soil quality for Paulownia fortunei growth in mid-subtropical, Hunan Province, China.

Materials and methods

To understand the effect of the growth of P. fortunei on soil conditions, 25 soil property parameters under Paulownia plantations were studied in Hunan Province, China. Seventy-two standard plots of eight different stand types were analyzed by three statistical approaches to assess soil quality (SQ) in the different P. fortunei plantations.

Results and discussion

The results revealed that a majority of the soil characteristics when intercropping with oilseed rape and the pure P. fortunei (plantation III) were better than intercropping with Camellia oleifera, orange trees, and Cunninghamia lanceolata (Lamb.). Available calcium, available magnesium, available potassium, available phosphorus, soil thickness, slope, soil organic matter, available sulfur, available copper, dehydrogenase, and available zinc were selected as the minimum data set (MDS). The SQ index (SQI) showed that three classes for soil quality among the eight P. fortunei plantations ranged from 0.48 to 0.88 and these were correlated with standing volume (p?<?0.05).

Conclusions

From the results, we concluded that selected MDS indicators can describe the soil fertility quality of P. fortunei plantations, and that the relationship between SQI and standing volume has a biological significance. P. fortunei plantations intercropped with Camellia oleifera, orange trees, and Cunninghamia lanceolata (Lamb.) caused a deterioration in SQ, but intercropping oilseed rape and pure P. fortunei plantations produced an improvement in SQ.

     

The effects of silicon fertilizer on denitrification potential and associated genes abundance in paddy soil

This study evaluated the effect of silicate fertilizer on denitrification and associated gene abundance in a paddy soil. A consecutive trial from 2013 to 2015 was conducted including the following treatments: control (CK), mineral fertilizer (NPK), NPK plus sodium metasilicate (NPK + MSF), and NPK plus slag-based silicate fertilizer (NPK + SSF). Real-time quantitative PCR (qPCR) was used to analyze the abundances of nirS, nirK, and nosZ genes. Potential N₂O emissions and ammonium and nitrate concentrations were related to the nirS and nirK gene abundance. Compared with the NPK treatments, the addition of a Si fertilizer decreased N₂O emission rates and denitrification potential by 32.4–66.6 and 22.0–59.2%, respectively, which were probably related to increased rice productivity, soil Fe availability, and soil N depletion. The abundances of nirS and nirK genes were decreased by 17.7–35.8% and 21.1–43.5% with addition of silicate fertilizers, respectively. Rates of total N₂O and N₂O from denitrification (DeN₂O) emission were positively correlated with the nirS and nirK gene abundance. Nitrate, exchangeable NH₄ ⁺, and Fe concentrations were the main factors regulating the nirS and nirK gene abundance. Silicate fertilization during rice growth may serve as an effective approach to decreasing N₂O emissions.     

Bacterial diversity in the rhizosphere of two phylogenetically closely related plant species across environmental gradients

Purpose

Rhizosphere soil bacterial communities are crucial to plant growth, health, and stress resistance. In order to detect how bacterial communities associated with the rhizosphere of phylogenetically related plant species vary in terms of composition, function, and diversity, we investigated the rhizosphere bacterial community structure of two perennial shrub species, Caragana jubata and Caragana roborovskyi, under natural field conditions in northwest China and analyzed the influence of soil properties and environmental factors.

Materials and methods

Eighteen root samples, eight for C. jubata, and ten for C. roborovskyi, along with any adherent soil particles, were collected from multiple sites in northwest China. The rhizosphere soil was washed from the roots, and bacterial communities were analyzed using Illumina MiSeq sequencing of 16S rRNA gene amplicons. Then, α-diversity and β-diversity were calculated using QIIME.

Results and discussion

Across species, Proteobacteria (29 %), Actinobacteria (15 %), Chloroflexi (10 %), Acidobacteria (10 %), Bacteroidetes (8 %), Firmicutes (8 %), Planctomycetes (7 %), Gemmatimonadetes (4 %), and Verrucomicrobia (3 %) were the most abundant phyla in the rhizosphere of C. jubata and C. roborovskyi. However, principal co-ordinates analysis indicated strong interspecific patterns of bacterial rhizosphere communities. Further, the richness of Proteobacteria, Acidobacteria, Bacteroidetes, Verrucomicrobia, Firmicutes, and Nitrospirae was significantly higher in the rhizosphere of C. jubata compared with C. roborovskyi, while the opposite was found for Actinobacteria and Cyanobacteria. However, the Shannon index showed no significant difference in α-diversity between C. jubata and C. roborovskyi. Distance-based redundancy analysis indicated that soil properties and environmental factors exerted strong influences on the structure of the rhizosphere bacterial community and explained 47 and 46 % of community variances between samples, respectively.

Conclusions

Our results showed strong interspecific clustering of the bacterial rhizosphere communities of C. roborovskyi and C. jubata. Altitude explained most of the variation in the composition of bacterial rhizosphere communities of C. roborovskyi and C. jubata, followed by soil pH, water content, organic matter content, total nitrogen content, and mean annual rainfall.

     

The Magnetic Susceptibility and Iron Oxides of Aquic Soils in Southern Iran

An investigation of the effect of aquic conditions on Fe-oxides distribution and magnetic susceptibility (χ_lf) was conducted on selected soils from Southern Iran. Seven pairs of adjacent soil pedons with different soil moisture regimes (aquic and non-aquic), were selected. The average concentrations of poorly crystalline Fe (Fe_o) and total free Fe (Fe_d) in aquic soils were 0.2 and 0.07% respectively, and 0.45 and 0.9% in non-aquic soils, respectively. The ratio of Fe_o/Fe_d varied from 0.03 to 0.64. χ_lf ranged from 1.8 to 113 × 10^?8 m³ kg^?1 in the soil studied. The variation of χ_fd ranged from 0.0 to 9.65%. The χ_fd values observed in non-aquic soils were larger than in aquic soils (4.00% vs. 1.37%). Positive correlations were observed between χ and clay contents in both aquic and non-aquic soils; however, non-aquic soil samples showed a larger coefficient of determination. A positive correlation existed between χ_fd and χ in aquic and non-aquic soils. Higher values of χ_fd were observed at the soil surface of non-aquic soil samples than at deeper levels, suggesting a greater proportion of ultrafine grains. Of the soil properties that were assessed, clay, cation exchangeable capacity (CEC), Fe_d, Fe_o/Fe_d ratio, χ_lf and χ_fd contents, changed significantly in response to the aquic condition.     

Biochar nutrient availability rather than its water holding capacity governs the growth of both C3 and C4 plants

Purpose

Biochar has been suggested as a soil conditioner to improve soil fertility and crop productivity while simultaneously mitigate global climate change by storing carbon in the soil. This study investigated the effect of pine (Pinus radiata) biochar application on soil water availability, nitrogen (N) and carbon (C) pools and growth of C3 and C4 plants.

Materials and methods

In a glasshouse pot trial, a pine biochar (untreated) and nutrient-enriched pine biochar were applied to a market garden soil with C3 (Spinacia oleracea L.) and C4 (Amaranthus paniculatus L.) plants at rates of 0, 1.0, 2.0, and 4.0 % (w/w). Plant biomass, soil pH, moisture content, water holding capacity (WHC), hot water extractable organic C (HWEOC), and total N (HWETN), total C and N, and their isotope compositions (δ ¹³C and δ ¹⁵N) of soils and plants were measured at the end of the experimentation.

Results and discussion

The soil moisture content increased while plant biomass decreased with increasing untreated biochar application rates. The addition of nutrient-enriched biochar significantly improved plant biomass in comparison to the untreated biochar addition at most application rates. Biochar application also increased the levels of labile organic C and N pools as indicated by HWEOC and HWETN.

Conclusions

The results suggested that the addition of pine biochar significantly improved soil water availability but not plant growth. The application of nutrient-enriched pine biochar demonstrated that the growth of C3 and C4 plants was governed by biochar nutrient availability rather than its water holding capacity under the pot trial condition.

     

Effect of <Emphasis Type="Italic">Bacillus subtilis</Emphasis> QST713 and <Emphasis Type="Italic">Trichoderma asperellum</Emphasis> T34 on P uptake by wheat and how it is modulated by soil properties

Purpose

The effect on P uptake by plants after inoculation with P-mobilizing microorganisms may be modulated by soil properties, including natural microbiota. However, to put this theory into practical use, research is needed to shed new light on the soil factors which affect the capability of improving P nutrition in plants. The aim of this study was to assess how two P-mobilizing microorganisms, Trichoderma asperellum T34 and Bacillus subtilis QST713, influence P uptake by wheat plants in different soils; this will allow us to identify the soil properties which affect the efficiency of P nutrition in plants.

Materials and methods

In a completely randomized experiment, wheat was grown in pots in a growing chamber in soils with Olsen P values ranging from 4.8 to 8.7 mg kg^?1. The plants were inoculated with three treatments: T34, B. subtilis, and a non-inoculated control.

Results and discussion

Overall, B. subtilis was more effective in increasing plant P uptake and in mobilizing soil P (measured as Olsen P values) than T34. In some soils, B. subtilis was the only treatment which increased Olsen P in the rhizosphere after cultivation. However, the effect of both microorganisms differed depending on the soil. For B. subtilis, phytase hydrolysable P, Olsen P, carbonates, the Fe_ca/Fe_cbd ratio, and citrate-soluble P accounted for 92% of the variation in P uptake in inoculated plants (compared with the non-inoculated control). Most of these soil properties also accounted for 87% of the variation in the levels of shoot dry matter (DM) in B. subtilis-inoculated plants compared with shoot DM in the control plants. In addition, Olsen P, the Fe_ca/Fe_cbd ratio, and phytase hydrolysable P in the NaOH extracts accounted for 82 and 74% of the variation in the effect of T34 on P uptake and shoot DM, respectively. Overall, the lower the initial Olsen P in the soil, the higher the P uptake caused by microorganisms.

Conclusions

The initial availability of P and organic P in soil, in addition to other properties affecting P dynamics in the soil, may explain the triggering and efficiency of the P-mobilizing mechanisms in microorganisms. These are crucial in explaining the potential benefits to crops and, as a result, their practical use as a bio-fertilizer.