C and N natural abundance of the soil microbial biomass

Stable isotope analysis is a powerful tool in the study of soil organic matter formation. It is often observed that more decomposed soil organic matter is ¹³C, and especially ¹⁵N-enriched relative to fresh litter and recent organic matter. We investigated whether this shift in isotope composition relates to the isotope composition of the microbial biomass, an important source for soil organic matter. We developed a new approach to determine the natural abundance C and N isotope composition of the microbial biomass across a broad range of soil types, vegetation, and climates. We found consistently that the soil microbial biomass was ¹⁵N-enriched relative to the total (3.2 ‰) and extractable N pools (3.7 ‰), and ¹³C-enriched relative to the extractable C pool (2.5 ‰). The microbial biomass was also ¹³C-enriched relative to total C for soils that exhibited a C3-plant signature (1.6 ‰), but ¹³C-depleted for soils with a C4 signature (−1.1 ‰). The latter was probably associated with an increase of annual C3 forbs in C4 grasslands after an extreme drought. These findings are in agreement with the proposed contribution of microbial products to the stabilized soil organic matter and may help explain the shift in isotope composition during soil organic matter formation.     

Carbon flow from C-labeled straw and root residues into the phospholipid fatty acids of a soil microbial community under field conditions

To better understand how residue quality and seasonal conditions influence the flow of C from both root and straw residues into the soil microbial community, we followed the incorporation of ¹³C-labeled crimson clover (Trifolium incarnatum) and ryegrass (Lolium multiflorum) root and straw residues into the phospholipid fatty acids (PLFA) of soil microbial biomass. After residue incorporation under field conditions in late summer (September), the ¹³C content of soil PLFA was measured in September, October, and November, 2002, and April and June, 2003. Multivariate non-metric multidimensional scaling techniques showed that the distribution of ¹³C among microbial PLFA differed among the four primary treatments (ryegrass straw and roots, clover straw and roots). Regardless of treatment, some PLFA remained poorly labeled with ¹³C throughout much of the study (16:1ω5, 10Me17:0; 0-5%), whereas other PLFA consistently contained a larger percentage of residue-derived C (16:0; 18:1ω9, 18:2ω6,9; 10-25%). The distribution of residue ¹³C among individual PLFA differed from the relative contributions of individual PLFA (mol%) to total PLFA-C, suggesting that a subset of the soil biomass was primarily responsible for assimilating residue-derived C. The distribution of ¹³C among soil PLFA differed between the sampling times, indicating that residue properties and soil conditions influenced which members of the community were assimilating residue-derived C. Our findings will provide the foundation for further studies to identify the nature of the community members responsible for residue decomposition at different times of the year, and what factors account for the dynamics of the community involved.     

Use of 13C and 15N natural abundance techniques to characterize carbon and nitrogen dynamics in composting and in compost-amended soils

Isotope fractionation during composting may produce organic materials with a more homogenous δ¹³C and δ¹⁵N signature allowing study of their fate in soil. To verify this, C, N, δ¹³C and δ¹⁵N content were monitored during nine months covered (thermophilic; >40 °C) composting of corn silage (CSC). The C concentration reduced from 10.34 to 1.73 g C (g ash)⁻¹, or 83.3%, during composting. Nitrogen losses comprised 28.4% of initial N content. Compost δ¹³C values became slightly depleted and increasingly uniform (from −12.8±0.6‰ to −14.1±0.0‰) with composting. Compost δ¹⁵N values (0.3±1.3 to 8.2±0.4‰) increased with a similar reduced isotope variability.The fate of C and N of diverse composts in soil was subsequently examined. C, N, δ¹³C, δ¹⁵N content of whole soil (0-5 cm), light (<1.7 g cm⁻³) and heavy (>1.7 g cm⁻³) fraction, and (250-2000 μm; 53-250 μm and <53 μm) size separates, were characterized. Measurements took place one and two years following surface application of CSC, dairy manure compost (DMC), sewage sludge compost (SSLC), and liquid dairy manure (DM) to a temperate (C₃) grassland soil. The δ¹³C values and total C applied (Mg C ha⁻¹) were DM (−27.3‰; 2.9); DMC (−26.6‰; 10.0); SSLC (−25.9‰; 10.9) and CSC (−14.0‰; 4.6 and 9.2). The δ¹³C of un-amended soil exhibited low spatial (−28.0‰±0.2; n=96) and temporal (±0.1‰) variability. All C₄ (CSC) and C₃ (DMC; SSLC) composts, except C₃ manure (DM), significantly modified bulk soil δ¹³C and δ¹⁵N. Estimates of retention of compost C in soil by carbon balance were less sensitive than those calculated by C isotope techniques. One and two years after application, 95 and 89% (CSC), 75 and 63% (SSLC) and 88 and 42% (DMC) of applied compost C remained in the soil, with the majority (80-90%) found in particulate (>53 μm) and light fractions. However, C₄ compost (CSC) was readily detectable (12% of compost C remaining) in mineral (<53 μm) fractions. The δ¹⁵N-enriched N of compost supported interpretation of δ¹³C data. We can conclude that composts are highly recalcitrant with prolonged C storage in non-mineral soil fractions. The sensitivity of the natural abundance tracer technique to characterize their fate in soil improves during composting, as a more homogeneous C isotope signature develops, in addition to the relatively large amounts of stable C applied in composts.     

Effects of heavy metal contamination and remediation on soil microbial communities in the vicinity of a zinc smelter as indicated by analysis of microbial community phospholipid fatty acid profiles

Heavy metal contamination in an area immediately surrounding a zinc smelter has resulted in destruction of over 485 hectares of forest. The elevated levels of heavy metals in these soils have had significant impacts on the population size and overall activity of the soil microbial communities. Remediation of these soils has resulted in increases in indicators of biological activity and viable population size, which suggest recovery of the microbial populations. Questions remain as to how the metal contamination and subsequent remediation at this site have impacted the population structure of the soil microbial communities. In the current study, microbial communities from this site were analyzed by the phospholipid fatty acid (PLFA) procedure. Principal component analysis of the PLFA profiles indicated that there were differences in the profiles for soils with different levels of metal contamination, and that soils with higher levels of metal contamination showed decreases in indicator PLFAs for mycorrhizal fungi, Gram-positive bacteria, fungi, and actinomycetes. PLFA profiles for remediated sites indicated that remediated soils showed increases in indicator PLFAs for fungi, actinomycetes, and Gram-positive bacteria, compared to unremediated metal contaminated soils. These data suggest a change in the population structure of the soil microbial communities resulting from metal contamination and a recovery of several microbial populations resulting from remediation.     

Three-source partitioning of CO2 efflux from soil planted with maize by C natural abundance fails due to inactive microbial biomass

A theoretical approach to the partitioning of carbon dioxide (CO₂) efflux from soil with a C₃ vegetation history planted with maize (Zea mays), a C₄ plant, into three sources, root respiration (RR), rhizomicrobial respiration (RMR), and microbial soil organic matter (SOM) decomposition (SOMD), was examined. The δ¹³C values of SOM, roots, microbial biomass, and total CO₂ efflux were measured during a 40-day growing period. A three-source isotopic mass balance based on the measured δ¹³C values and on assumptions made in other studies showed that RR, RMR, and SOMD amounted to 91%, 4%, and 5%, respectively. Two assumptions were thoroughly examined in a sensitivity analysis: the absence of ¹³C fractionation and the conformity of δ¹³C of microbial CO₂ and that of microbial biomass. This approach strongly overestimated RR and underestimated RMR and microbial SOMD. CO₂ efflux from unplanted soil was enriched in ¹³C by 2.0‰ compared to microbial biomass. The consideration of this ¹³C fractionation in the mass balance equation changed the proportions of RR and RMR by only 4% and did not affect SOMD. A calculated δ¹³C value of microbial CO₂ by a mass balance equation including active and inactive parts of microbial biomass was used to adjust a hypothetical below-ground CO₂ partitioning to the measured and literature data. The active microbial biomass in the rhizosphere amounted to 37% to achieve an appropriate ratio between RR and RMR compared to measured data. Therefore, the three-source partitioning approach failed due to a low active portion of microbial biomass, which is the main microbial CO₂ source controlling the δ¹³C value of total microbial biomass. Since fumigation-extraction reflects total microbial biomass, its δ¹³C value was unsuitable to predict δ¹³C of released microbial CO₂ after a C₃-C₄ vegetation change. The second adjustment to the CO₂ partitioning results in the literature showed that at least 71% of the active microbial biomass utilizing maize rhizodeposits would be necessary to achieve that proportion between RR and RMR observed by other approaches based on ¹⁴C labelling. The method for partitioning total below-ground CO₂ efflux into three sources using a natural ¹³C labelling technique failed due to the small proportion of active microbial biomass in the rhizosphere. This small active fraction led to a discrepancy between δ¹³C values of microbial biomass and of microbially respired CO₂.     

Bioavailability and effects of heavy metals on soil microbial biomass survival during laboratory incubation

In this work we studied the influence of Pb, Zn, and Tl on microbial biomass survival and activity during a laboratory incubation of soil. In comparison to uncontaminated soil, the microbial biomass C decreased sharply in soil contaminated with Zn and Tl, whereas the addition of Pb did not have any significant inhibitory effect on the level of microbial biomass C. Zn displayed the greatest biocidal effect, confirmed by the measurement of the death rate quotient (q D). The microbial activity, measured as CO₂ evolution, increased significantly in contaminated soils, emphasizing the need of living organisms to expend more energy to survive. The greater demand for energy by microorganisms in order to cope with the toxicity of pollutants was also confirmed by measurement of the metabolic quotient (q CO₂). In order to determine whether soil microorganisms affect the bioavailability of these metals through their mobilization and release, we studied the relationships between available Pb, Zn, and Tl, and microbial biomass C. The water-soluble fraction of Tl, available Tl, and Zn, and microbial biomass C were related significantly, but not Pb.     

Use of C abundance to study short-term pig slurry decomposition in the field

Applying pig slurry (PS) on agricultural soils is a common practice. However, its impact on soil organic C dynamics is not clear. This experiment investigated the use of natural ¹³C abundance to study the short-term C mineralization of anaerobically stored PS under field conditions. Measurements of δ¹³C-CO₂ were made on soil air samples obtained from a bare sandy loam during 22 d following incorporation of either PS alone, PS+barley straw, or barley straw alone; an unamended treatment was used as a control. Slurry C was enriched in ¹³C (−20.0‰) because of the high corn (Zea mays L.) content of the animal diet. This value contrasted with δ¹³C of −28.4‰ for the soil organic matter and of −29.0‰ for the barley straw. A peak of high δ¹³CO₂ values (average of −9.2‰) was observed on the day of PS application and was attributed to the dissociation of PS carbonates when mixed with the relatively acidic soil. After this initial burst, 36% of the evolved CO₂ originated from the decomposing PS. After 22 d of incubation, approx. 20% of the PS-C had been lost as CO₂. This short-term field study did not show any priming effect of PS on the mineralization of straw or native soil C. Due to its heterogeneity, the use of the isotopic composition of the evolved CO₂ for estimating PS decomposition requires precaution either through the use of a specific experimental design involving comparable C3 and C4 treatments, or calculations to account for the presence of ¹³C-enriched inorganic C in the PS.     

Soil C balance in a long-term field experiment in relation to the size of the microbial biomass

Soil C balances were calculated in a field experiment started in 1956. Treatments include a fallow and soils receiving different N fertilizers or organic amendments. By assuming the absence of a priming effect, the degree of mineralization of crop residues and organic amendments was calculated. Crop residue mineralization was not affected by a more than 50% decrease in the size of the microbial biomass in soil fertilized with (NH₄)₂SO₄, which had caused the pH of this soil to drop from 6.6 to 4.4. More C had accumulated per unit C input in peat-and sewage sludge-amended soils than in any of the other soils, suggesting that peat and sewage sludge were more resistant to microbial attack. Recalcitrance of substrate C was an adequate explanation for the low ratio of biomass C to soil C in the peat-amended soils, but not in the sewage sludge-amended soil. There was a close linear relationship (r=0.94) between the content of microbial biomass C in the soil measured in 1990 and cumulative C losses from the soil since 1956. Compared to the relationship between soil biomass C and soil organic C concentrations, the linear relationship between microbial C and cumulative C losses suggested that the significantly reduced biomass in the sewage sludge-amended soil was at least partially due to the presence of toxic substances (presumably elevated heavy metal concentrations) in this soil and was probably not affected by the somewhat low pH (5.3) in this soil.     

Post-harvest residue management effects on recalcitrant carbon pools and plant biomarkers within the soil heavy fraction in Pinus radiata plantations

Forest soils contain about 30% of terrestrial carbon (C) and so knowledge of the influence of forest management on stability of soil C pools is important for understanding the global C cycle. Here we present the changes of soil C pools in the 0-5 cm layer in two second-rotation Pinus radiata (D.Don) plantations which were subjected to three contrasting harvest residue management treatments in New Zealand. These treatments included whole-tree harvest plus forest floor removal (defined as forest floor removal hereafter), whole-tree, and stem-only harvest. Soil samples were collected 5, 10 and 15 years after tree planting at Kinleith Forest (on sandy loam soils) and 4, 12 and 20 years after tree planting at Woodhill Forest (on sandy soils). These soils were then physically divided into light (labile) and heavy (stable) pools based on density fractionation (1.70 g cm⁻³). At Woodhill, soil C mass in the heavy fraction was significantly greater in the whole-tree and stem-only harvest plots than the forest floor removal plots in all sampling years. At Kinleith, the soil C mass in the heavy fraction was also greater in the stem-only harvest plots than the forest floor removal plots at year 15. The larger stable soil C pools with increased residue return was supported by analyses of the chemical composition and plant biomarkers in the soil organic matter (SOM) heavy fractions using NMR and GC/MS. At Woodhill, alkyl C, cutin-, suberin- and lignin-derived C contents in the SOM heavy fraction were significantly greater in the whole-tree and stem-only harvest plots than in the forest floor removal plots in all sampling years. At Kinleith, alkyl C (year 15), cutin-derived C (year 5 and 15) and lignin-derived C (Year 5 and 10) contents in the SOM heavy fraction were significantly greater in stem-only harvest plots than in plots where the forest floor was removed. The analyses of plant C biomarkers and soil δ¹³C in the light and heavy fractions of SOM indicate that the increased stable soil C in the heavy fraction with increased residue return might be derived from a greater input of recalcitrant C in the residue substrate.     

Carbon fluxes in soil food webs of increasing complexity revealed by C labelling and C natural abundance

Soil food webs are mainly based on three primary carbon (C) sources: root exudates, litter, and recalcitrant soil organic matter (SOM). These C sources vary in their availability and accessibility to soil organisms, which could lead to different pathways in soil food webs. The presence of three C isotopes (¹²C, ¹³C and ¹⁴C) offers an unique opportunity to investigate all three C sources simultaneously. In a microcosm experiment we studied the effect of food web complexity on the utilization of the three carbon sources. We choose an incomplete three factorial design with (i) living plants, (ii) litter and (iii) food web complexity. The most complex food web consisted of autochthonous microorganisms, nematodes, collembola, predatory mites, endogeic and anecic earthworms. We traced C from all three sources in soil, in CO₂ efflux and in individual organism groups by using maize grown on soil developed under C₃ vegetation and application of ¹⁴C labelled ryegrass shoots as a litter layer. The presence of living plants had a much greater effect on C pathways than food web complexity. Litter decomposition, measured as ¹⁴CO₂ efflux, was decreased in the presence of living plants from 71% to 33%. However, living plants increased the incorporation of litter C into microbial biomass and arrested carbon in the litter layer and in the upper soil layer. The only significant effect of food web complexity was on the litter C distribution in the soil layers. In treatments with fungivorous microarthropods (Collembola) the incorporation of litter carbon into mineral soil was reduced. Root exudates as C source were passed through rhizosphere microorganisms to the predator level (at least to the third trophic level). We conclude that living plants strongly affected C flows, directly by being a source of additional C, and indirectly by modifying the existing C flows within the food web including CO₂ efflux from the soil and litter decomposition.     

Carbon dynamics determined by natural C abundance in microcosm experiments with soils from long-term maize and rye monocultures

Understanding carbon dynamics in soil is the key to managing soil organic matter. Our objective was to quantify the carbon dynamics in microcosm experiments with soils from long-term rye and maize monocultures using natural ¹³C abundance. Microcosms with undisturbed soil columns from the surface soil (0-25 cm) and subsoil (25-50 cm) of plots cultivated with rye (C₃-plant) since 1878 and maize (C₄-plant) since 1961 with and without NPK fertilization from the long-term experiment ‘Ewiger Roggen’ in Halle, Germany, were incubated for 230 days at 8 °C and irrigated with 2 mm 10⁻² M CaCl₂ per day. Younger, C₄-derived and older, C₃-derived percentages of soil organic carbon (SOC), dissolved organic carbon (DOC), microbial biomass (C_mic) and CO₂ from heterothropic respiration were determined by natural ¹³C abundance. The percentage of maize-derived carbon was highest in CO₂ (42-79%), followed by C_mic (23-46%), DOC (5-30%) and SOC (5-14%) in the surface soils and subsoils of the maize plots. The percentage of maize-derived C was higher for the NPK plot than for the unfertilized plot and higher for the surface soils than for the subsoils. Specific production rates of DOC, CO₂-C and C_mic from the maize-derived SOC were 0.06-0.08% for DOC, 1.6-2.6% for CO₂-C and 1.9-2.7% for C_mic, respectively, and specific production rates from rye-derived SOC of the continuous maize plot were 0.03-0.05% for DOC, 0.1-0.2% for CO₂-C and 0.3-0.5% for C_mic. NPK fertilization did not affect the specific production rates. Strong correlations were found between C₄-derived C_mic and C₄-derived SOC, DOC and CO₂-C (r≥0.90), whereas the relationship between C₃-derived C_mic and C₃-derived SOC, DOC and CO₂-C was not as pronounced (r≤0.67). The results stress the different importance of former (older than 40 years) and recent (younger than 40 years) litter C inputs for the formation of different C pools in the soil.     

Carbon sequestration in soils with annual inputs of maize biomass and maize-derived animal manure: Evidence from C abundance

The abundance of ¹³C was determined over a period of nine years in two soils (LUN, coarse sand; ASK, sandy loam) following their conversion from C3-crops and to the C4-crop silage maize (Zea mays L.). The soils were exposed to identical management and climatic conditions, and were sampled every second year. The aboveground maize biomass was either removed (stubbles and roots left), chopped and added to the soil, or fed to sheep and the faeces then added to the soil. Annual inputs of maize biomass and sheep faeces were similar (0.8 kg DM m⁻²). The study included soils maintained under C3-crops (beet roots, Beta vulgaris L.). After nine years of maize cropping, soil C from stubbles and roots accounted for 12 and 16% of the total-C in the LUN and ASK soil, respectively. Without additional organic amendment the content of total-C in the ASK soil remained constant and similar to that of soil retained under C3-crops whereas total-C tended to decrease in the LUN soil. When maize biomass and sheep faeces were added, soil total-C increased and C from these C4-sources averaged 14% and 21% of the soil total-C, respectively. Following nine annual additions, retention of C added in aboveground maize biomass averaged 19% while the retention of C added in maize-derived faeces was 30%. Our study infers that that ruminant manure C contributes about 50% more to soil C sequestration than C applied in crop residues.     

Carbon and nitrogen dynamics in a forest soil amended with purified tannins from different plant species

Tannins are purported to be an important factor controlling nitrogen cycling in forest ecosystems, and the ability of tannins to bind proteins in protein-tannin complexes is thought to be the primary mechanism responsible for these effects. In this study, we examined the influence of well-characterized tannins purified from five different plant species on C and N dynamics of a forest soil A horizon. Tannic acid, a commonly used and commercially available hydrolyzable tannin (HT), and cellulose were also included for comparison. With the exception of tannins from huckleberry (Vaccinium ovatum), the amendments increased respiration 1.4-4.0 fold, indicating that they were acting as a microbial C source. Tannic acid was significantly more labile than the five purified tannins examined in this study. All treatments decreased net N mineralization substantially, through greater N immobilization and decreased mineralization. The six tannins inhibited gross ammonification rates significantly more than cellulose. This suggests that added tannins had effects in addition to serving as an alternative C source. Tannins purified from Bishop pine (Pinus muricata) were the only tannins that significantly inhibited potential gross nitrification rates, however, rates were low even in the control soil making it difficult to detect any inhibition. Differences in tannin structure such as condensed versus HTs and the hydroxylation pattern of the condensed tannin B-ring likely explain differences observed among the tannin treatments. Contrary to other studies, we did not find that condensed tannins were more labile and less inhibitory than HTs, nor that shorter chained tannins were more labile than longer chained tannins. In addition to supporting the hypothesis that reduced N availability in the presence of tannins is caused by complexation reactions, our data suggests tannins act as a labile C source leading to increased N immobilization.     

Effects of acid rain on leaf-litter decomposition in a beech forest on calcareous soil

Summary The effects of simulated acid rain on litter decomposition in a calcareous soil (pH_{H 2 O} 5.8) were studied. Litterbags (45 m and 1 mm mesh size) containing freshly fallen beech leaf litter were exposed to different concentrations of acid in a beech forest on limestone (Göttinger Wald. Germany) for 1 year. Loss of C, the ash content, and CO₂–C production were measured at the end of the experiment. Further tests measured the ability of the litter-colonizing microflora to metabolize ¹⁴C-labelled beech leaf litter and hyphae. The simulated acid rain strongly reduced CO₂–C and ¹⁴CO₂–C production in the litter. This depression in production was very strong when the input of protons was 1.5 times greater than the normal acid deposition, but comparatively low when the input was 32 times greater. acid deposition may thus cause a very strong accumulation of primary and secondary C compounds in the litter layer of base-rich soils, even with a moderate increase in proton input. The presence of mesofauna significantly reduced the ability of the acid rain to inhibit C mineralization. The ash content to the 1-mm litterbags indicated that this was largely due to transport of base-rich mineral soil into the litter.     

Separation of soil respiration into CO2 emission sources using 13C natural abundance in a deciduous broad-leaved forest in Japan

Abstract

In determining the soil and ecosystem carbon balance, it is necessary to distinguish between autotrophic respiration and heterotrophic respiration. We attempted to measure the contribution of CO₂ emissions from plant roots (R_RHI), from soil organic matter (R_SOM), and from litter (R_L) to CO₂ emissions from the forest floor (soil respiration; R_S) in a deciduous forest of oak (Quercus serrata Thunb.) and hornbeams (Carpinus laxiflora Sieb. et Zucc. Bl., Carpinus tschonoskii Maxim. and Carpinus japonica Bl.) on Andosols in Japan, using a ¹³C natural abundance technique. The ¹³C natural abundances of roots (δ_RHI), litter (δ_L) and SOM (δ_SOM) in the surface soil were ?28.9, ?30.1 and ?24.3‰, respectively. This means that the differences between δ_SOM and δ_RHI are large enough to calculate the contributions of R_RHI, R_SOM and R_L to R_S based on the mass balance of the CO₂ isotope ratios. R_RHI and R_SOM had close relationships with soil temperature, and R_L was influenced by soil temperature and moisture. In summer, under high soil temperatures, R_RHI and R_SOM were the predominant sources of R_S and the proportion of R_RHI to R_SOM to R_L was 51:44:5. In winter, R_L was predominant and the proportion of R_RHI to R_SOM to R_L was 20:11:69. The estimated annual emissions of R_RHI, R_SOM and R_L were 1.45, 2.10 and 1.30 Mg C ha^?1, respectively; thus, the proportion of R_RHI to R_SOM to R_L was 30:43:27 on a whole-year basis.     

Soil organic matter dynamics in lands continuously cultivated with maize and soybean in Heilongjiang Province,Northeast China: Estimation from natural 13C abundance

Abstract

Northeast China is the main production area of maize and soybean in China. In the present study, the rates of decomposition and replacement of soil organic carbon (SOC) were estimated using the soil inventory collected since 1991 from long-term maize and soybean cultivation plots in Heilongjiang Province, Northeast China, to evaluate the sustainability of the present cultivation system. The total carbon (C) content in soil was stable without any significant changes in the plots (approximately 28.5 g C kg^?1). The δ¹³C value of soil organic matter under continuous maize cultivation increased linearly with an annual increment of 0.07 from ?23.9 in 1991, which indicated that approximately 13% of the initial SOC was decomposed during the 13-year period of maize cultivation, with a half-life of 65 years. Slow decomposition of SOC was considered to result from the low annual mean temperature (1.5°C) and long freezing period (170–180 days year^?1) in the study area. In contrast, the amount of organic C derived from maize increased in the soil with a very slow annual increment of 0.17 g C kg^?1, probably because of the removal of all the plant residues from the plots. Based on the soil organic matter dynamics observed in the study plots, intentional recycling/maintenance of plant residues was proposed as a way of increasing soil fertility in maize or soybean cultivation.     

Modification of the original chloroform fumigation extraction technique to allow measurement of δC of soil microbial biomass carbon

In studies of the soil microbial biomass C by the chloroform fumigation extraction (CFE) technique, biomass C is routinely extracted using 0.5 M K₂SO₄ solution. The excessive amounts of salts contained in the extracting solution pause a significant challenge in using ¹³C isotope techniques to study the nature of C in the soil microbial biomass. This is because the salts can affect the oxidation process and therefore hamper accurate mass spectromic analysis of dried extracts. In spite of this, no standard protocol exists for preparing the K₂SO₄ extracts for ¹³C isotope analysis. We have modified the original CFE method to allow measurement of the δ¹³C of soil microbial biomass C by using 2 M KCl instead of the usual 0.5 M K₂SO₄ solution to extract biomass C. Excess salts were removed by dialysis in 100 molecular weight cut off membranes, after which the extracts were freeze-dried and their δ¹³C measured using a mass spectrometer. The soil microbial biomass C and δ¹³C of 2 M KCl extracts were compared with those of 0.5 M K₂SO₄ extracts. There was excellent agreement between organic C and δ¹³C estimates for dialyzed 2 M KCl and 0.5 M K₂SO₄ extracts, but the speed of dialysis for the latter was very slow, making use of the former more rapid. These results suggest that in procedures where oxidation with potassium dichromate is not critical to analysis of soluble C, 2 M KCl may be used in place of 0.5 M K₂SO₄ to extract soil microbial biomass C for δ¹³C measurements. The new procedure is relatively easy and rapid for obtaining indices for both pool sizes and turnover rates of soil microbial biomass C and provides a promising approach to study soil organic C.     

Bioavailability of heavy metals and abundance of arbuscular mycorrhiza in a soil polluted by atmospheric deposition from a smelter

The bioavailability of heavy metals (Cd, Zn, Pb, Cu) and the abundance of arbuscular mycorrhiza (AM) were studied in two agricultural fields close to a Pb-Zn smelter and three fields outside the pollution zone all cultivated with maize (Zea mays L.). Metal extractability with ethylenediaminetetraacetic acid (EDTA)-NH₄OAc and Ca(NO₃)₂, plant metal uptake, and mycorrhizal parameters (spore number, root colonization) were assessed at two growth stages (six-leaf and maturity). Despite regular liming, the availability of Cd, Zn, and Pb was markedly higher in the two metal-polluted fields than in the three uncontaminated fields. However, the AM abundance was not correlated with metal availability. Root colonization and spore numbers in the metal polluted fields were relatively high, though at plant maturity the former was significantly lower than in one of the uncontaminated fields. The very low AM abundance in the two other unpolluted fields was related to other factors, particular soil and plant P status and soil pH. AM root colonization did not substantially prevent plant metal accumulation, since the metal concentrations in maize grown on the polluted fields strongly exceeded normal values, and for Cd and Pb reached the limits of toxicity for animal feed.     

Dissipation of bacterially derived C and N through the meso- and macrofauna of a grassland soil

Feeding relationships between organisms may be determined by observations of behaviour in manipulative experiments or, as in more recent times, by the use of stable isotope labelling to trace the passage of ¹³C and ¹⁵N through food webs. Here we introduce living bacteria, labelled with both ¹³C and ¹⁵N into intact soil cores to understand further the movement of bacterially sourced C and N into the meso- and macrofauna of a grassland soil. We found that these groups showed a range of isotope levels which relate to their feeding strategies. Some had no label (e.g. dipterous larvae), whilst others were highly labelled which may indicate a preference for the added bacteria. This latter group included Collembola, generally perceived as being predominantly fungal feeders. This work describes a novel technique which has the potential to provide critical information about the dissipation of bacterially derived C and N through the soil food web.     

外源碳输入对华北平原农田和湿地土壤有机碳矿化及其温度敏感性的影响

研究外源碳输入和气候变暖对土壤有机碳矿化的影响,对于深入理解土壤有机碳的稳定和积累机制以及其对全球变化的响应具有重要意义。通过为期35 d的室内培养试验,利用~(13)C稳定同位素标记技术,研究了华北平原典型农田和湿地土壤在15℃和25℃下的土壤有机碳矿化及激发效应。结果表明,土地利用类型(农田/湿地)、温度(15℃/25℃)和葡萄糖添加[0.4mg(C)·g~(-1)]对土壤有机碳矿化均具有显著影响。在相同培养温度下,未添加葡萄糖的农田和湿地土壤有机碳矿化无显著差异,而添加葡萄糖处理下农田土壤有机碳矿化显著高于湿地土壤。除湿地土壤在15℃下培养外,添加葡萄糖显著促进了农田和湿地土壤有机碳矿化,农田土壤有机碳矿化的激发效应显著高于湿地土壤。温度升高显著促进了农田和湿地土壤有机碳矿化,培养过程中土壤有机碳矿化温度敏感性Q10为1.2～1.6,土地利用类型和葡萄糖添加对土壤有机碳矿化温度敏感性的影响都不显著。在温度升高和外源碳输入的共同作用下,农田土壤有机碳矿化显著高于湿地土壤。