Bacterial diversity and community structure along different peat soils in boreal forest

Bacteria in peat forest soil play important role in global carbon cycling. The distribution of bacteria population in different peat soils as a whole and how forest management practices alter the bacterial populations are still poorly known. Using pyrosequencing analysis of 16S rRNA gene, we quantified the diversity and community structure of bacteria in eight peat forest soils (pristine and drained) and two mineral forest soils from Lakkasuo, Finland with either spruce-dominant or pine-dominant tree species. In total, 191,229 sequences which ranged from 15,710 to 22,730 per sample were obtained and affiliated to 13 phyla, 30 classes and 155 genera. The peat forest soils showed high bacterial diversity and species richness. The tree species seems to have more strong impact on the bacterial diversity than the type of peat soil, which drives the changes in bacterial community structure. The dominant taxonomic groups across all soils (>1% of all sequences) were Proteobacteria, Acidobacteria, Actinobacteria, Bacteroidetes, Planctomycetes and Verrucomicrobia. The relative abundance of bacteria phylum and genus differed between soil types and between vegetation. Significant differences in relative abundance of bacteria phyla were only found for Gemmatimonadetes and Cyanobacteria between the pristine and the drained peat forest soils. At genus level, the relative abundance of several genera differed significantly between the peat soils with same or different tree species, including Burkholderia, Caulobacter, Opitutus, Mucilanginibacter, Acidocella, Mycobacterium, Bradyrhizobium, Dyella and Rhodanobacter.     

Determinants of litter mixing effects in a Swedish boreal forest

When the litter of a given species decomposes, it will often break down in the proximity of litters from other species. We investigated the effects of litters of 10 different species in a boreal forest of northern Sweden on each others' decomposition and N release rates; this was done through the use of litterbags containing two compartments separated by single mesh partition. Different litters could be placed on opposite sides of this mesh so that they were in contact with each other. Treatments consisted of all the possible pairwise combinations of the 10 species, with members of each pair placed in different compartments of the same litterbag. Litterbags were harvested after 1, 2 and 4 years in the field. Species differed significantly in their effects on decomposition and N loss rates of associated litters. Generally, litters from feather mosses and lichens showed the greatest promotion of decomposition on associated litters, while some vascular plant species, notably Empetrum hermaphroditum, showed the least. At year four, feather mosses also had the greatest positive effects on N loss from the litters of associated species. There were several instances in which litter of a given species decomposed at different rate when litter from its own species, rather than that of a different species, was placed in the adjacent litterbag compartment. This was particularly apparent in the second year, when across the entire data set, litters decomposed fastest when associated with their own litters. Generally, slowly decomposing litters had the greatest positive effects on decomposition of associated litters. It is proposed that in boreal forests slow decomposing litters (particularly those of feather mosses) may contribute to enhancing moisture attention in the litter layer, which in turn promotes the decomposition and N release of associated litters. Further, while litter mixing effects were clearly demonstrated in our study, they were also shown to be of secondary importance to the effects of species identity on decomposition.     

Nitrogen alters carbon dynamics during early succession in boreal forest

Boreal forests are an important source of wood products, and fertilizers could be used to improve forest yields, especially in nutrient poor regions of the boreal zone. With climate change, fire frequencies may increase, resulting in a larger fraction of the boreal landscape present in early-successional stages. Since most fertilization studies have focused on mature boreal forests, the response of burned boreal ecosystems to increased nutrient availability is unclear. Therefore, we used a nitrogen (N) fertilization experiment to test how C cycling in a recently-burned boreal ecosystem would respond to increased N availability. We hypothesized that fertilization would increase rates of decomposition, soil respiration, and the activity of extracellular enzymes involved in C cycling, thereby reducing soil C stocks. In line with our hypothesis, litter mass loss increased significantly and activities of cellulose- and chitin-degrading enzymes increased by 45-61% with N addition. We also observed a significant decline in C concentrations in the organic soil horizon from 19.5 ± 0.7% to 13.5 ± 0.6%, and there was a trend toward lower total soil C stocks in the fertilized plots. Contrary to our hypothesis, mean soil respiration over three growing seasons declined by 31% from 78.3 ± 6.5 mg CO₂-C m⁻² h⁻¹ to 54.4 ± 4.1 mg CO₂-C m⁻² h⁻¹. These changes occurred despite a 2.5-fold increase in aboveground net primary productivity with N, and were accompanied by significant shifts in the structure of the fungal community, which was dominated by Ascomycota. Our results show that the C cycle in early-successional boreal ecosystems is highly responsive to N addition. Fertilization results in an initial loss of soil C followed by depletion of soil C substrates and development of a distinct and active fungal community. Total microbial biomass declines and respiration rates do not keep pace with plant inputs. These patterns suggest that N fertilization could transiently reduce but then increase ecosystem C storage in boreal regions experiencing more frequent fires.     

Low levels of nitrogen addition stimulate decomposition by boreal forest fungi

Climate warming and associated increases in nutrient mineralization may increase the availability of soil nitrogen (N) in high latitude ecosystems, such as boreal forests. These changes in N availability could feed back to affect the decomposition of litter and organic matter by soil microbes. Since fungi are important decomposers in boreal forest ecosystems, we conducted a 69-day incubation study to examine N constraints on fungal decomposition of organic substrates common in boreal ecosystems, including cellulose, lignin, spruce wood, spruce needle litter, and moss litter. We added 0, 20, or 200 μg N to vials containing 200 mg substrate in factorial combination with five fungal species isolated from boreal soil, including an Ascomycete, a Zygomycete, and three Basidiomycetes. We hypothesized that N addition would increase CO₂ mineralization from the substrates, particularly those with low N concentrations. In addition we predicted that Basidiomycetes would be more effective decomposers than the other fungi, but would respond weakly or negatively to N additions. In support of the first hypothesis, cumulative CO₂ mineralization increased from 635 ± 117 to 806 + 108 μg C across all fungal species and substrates in response to 20 μg added N; however, there was no significant increase at the highest level of N addition. The positive effect of N addition was only significant on cellulose and wood substrates which contained very little N. We also observed clear differences in the substrate preferences of the fungal species. The Zygomycete mineralized little CO₂ from any of the substrates, while the Basidiomycetes mineralized all of the substrates except spruce needles. However, the Ascomycete (Penicillium) was surprisingly efficient at mineralizing spruce wood and was the only species that substantially mineralized spruce litter. The activities of β-glucosidase and N-acetyl-glucosaminidase were strongly correlated with cumulative respiration (r = 0.78 and 0.74, respectively), and Penicillium was particularly effective at producing these enzymes. On moss litter, the different fungal species produced enzymes that targeted different chemical components. Overall, our results suggest that fungal species specialize on different organic substrates, and only respond to N addition on low N substrates, such as wood. Furthermore, the response to N addition is non-linear, with the greatest substrate mineralization at intermediate N levels.     

Temporal and spatial variability of soil respiration in a boreal mixedwood forest

Temporal and spatial variability of soil respiration (R_s) was measured and analyzed in a 74-year-old, mixedwood, boreal forest in Ontario, Canada, over a period of 2 years (August 2003–July 2005). The ranges of R_s measured during the two study years were 0.5–6.9 μmol CO₂ m⁻² s⁻¹ for 2003–2004 (Year 1) and 0.4–6.8 μmol CO₂ m⁻² s⁻¹ for 2004–2005 (Year 2). Mean annual R_s for the stand was the same for both years, 2.7 μmol CO₂ m⁻² s⁻¹. Temporal variability of R_s was controlled mainly by soil temperature (T_s), but soil moisture had a confounding effect on T_s. Annual estimates of total soil CO₂ emissions at the site, calculated using a simple empirical R_s–T_s relationship, showed that R_s can account for about 88 ± 27% of total annual ecosystem respiration at the site. The majority of soil CO₂ emissions came from the upper 12 to 20 cm organic LFH (litter–fibric–humic) soil layer. The degree of spatial variability in R_s, along the measured transect, was seasonal and followed the seasonal trend of mean R_s: increasing through the growing season and converging to a minimum in winter (coefficient of variation (CV) ranged from 4 to 74% in Year 1 and 4 to 62% in Year 2). Spatial variability in R_s was found to be negatively related to spatial variability in the C:N ratio of the LHF layer at the site. Spatial variability in R_s was also found to depend on forest tree species composition within the stand. R_s was about 15% higher in a broadleaf deciduous tree patch compared to evergreen coniferous area. However, the difference was not always significant (at 95% CI). In general, R_s in the mixedwood patch, having both deciduous and coniferous species, was dominated by broadleaf trees, reflecting changing physiological controls on R_s with seasons. Our results highlight the importance of discerning soil CO₂ emissions at a variety of spatial and temporal scales. They also suggest including the LFH soil layer and allowing for seasonal variability in CO₂ production within that layer, when modeling soil respiration in forest ecosystems.     

不同施肥处理对太湖地区水稻土团聚体粒组细菌和真菌组成和多样性的影响

选择太湖地区水稻-油菜轮作的长期肥料试验的水稻田,采集原状土进行团聚体颗粒分离,提取土壤微生物DNA进行PCR-DGGE分析,通过对DGGE结果进行主成分分析和多样性指数的计算,比较秸秆还田和化肥配施与单施化肥两施肥处理对土壤团聚体中微生物群落组成和多样性的影响。结果表明：与单施化肥相比,秸秆还田显著改变了2 000 ~ 200 μm和200 ~ 20 μm两粒组中细菌和真菌的群落组成,说明较大颗粒组中微生物群落组成灵敏响应施肥措施的变化。不同团聚体粒组微生物群落多样性存在差异,细菌的多样性在2 000 ~ 200 μm与＜2 μm粒组中较高,真菌则在大粒组中表现出较高的多样性,而且由团聚体粒组本身带来的微生物多样性的变异大于施肥措施引起的变异。     

设施种植模式对土壤细菌多样性及群落结构的影响

为了研究有机和常规设施种植模式及轮作对土壤细菌多样性和群落结构的影响,本研究采用Illumina平台Hiseq 2500高通量测序技术,于2016年6月(作物处于收获期)对北京市顺义区不同设施种植模式(分别为有机设施种植模式和常规设施种植模式下的叶菜连作、茄果连作和叶茄轮作)下土壤细菌进行16S r RNA测序。测序质控后共获得17 278个操作分类单元(operational taxonomic units,OTUs),共计318 851条有效序列。比较不同种植模式和轮作下土壤细菌多样性、细菌群落结构组成、相对丰度及土壤理化性质与细菌群落多样性关系的差异性。结果表明:土壤微生物群落结构在有机和常规设施种植模式下差异明显,有机设施种植土壤细菌多样性高于常规设施种植;有机设施种植下轮作与连作土壤细菌群落结构表现出明显差异,而常规设施种植下,两者没有明显差异;有机种植模式下,轮作土壤细菌群落多样性高于连作土壤;设施种植土壤细菌群落主要属于鞘氨醇单胞菌属(Sphingomonas,5.05%)和芽孢杆菌属(Bacillus,4.84%),相对丰度大于0.5%的共有14个属。有机设施种植土壤含有较多促进植物生长、有机质分解的细菌,常规设施种植土壤中降解化学杀虫剂、防治土壤病害、促进硝化过程的细菌较多。RDA分析结果显示土壤细菌群落主要受全磷、速效磷、有机质的影响。Tumebacillus、Candidatus Solibacter和Acidothermus都是分解有机质、利用碳源的细菌属,与土壤有机质含量呈正相关关系。由此可见,设施条件下,有机和常规种植土壤微生物群落结构的差异性主要源于肥料使用、有害生物防治措施和管理方式的不同。有机设施种植模式下,轮作更有利于发挥其改良土壤营养循环和防治土壤病虫害的作用。上述结果为在微生物水平上研究设施条件下不同种植模式的土壤生态质量差异提供了参考。     

Tree identity surpasses tree diversity in affecting the community structure of oribatid mites (Oribatida) of deciduous temperate forests

The role of tree diversity and identity as determinants of soil animal community structure is little understood. In a mature deciduous forest dominated by beech we identified clusters of one, two and three tree species of beech, ash and lime allowing to investigate the role of tree species diversity and identity on the density and community structure of oribatid mites. To relate oribatid mite community structure to environmental factors we measured leaf litter input, fine root biomass, mass of organic layers, topsoil pH and C and N content. We expected oribatid mite density to increase with increasing tree diversity, but we expected the effects of tree species identity to override effects of tree diversity. Further, we hypothesized the density of oribatid mites to be reduced by the presence of beech but increased by the presence of lime and ash. As expected tree diversity little affected oribatid mite communities, whereas tree species identity strongly altered density and community structure of oribatid mites. However, in contrast to our expectations the density of oribatid mites was highest in presence of beech indicating that many oribatid mite species benefit from the presence of recalcitrant litter forming thick organic layers. Especially Oppioidea benefited from the presence of beech presumably due to an increased availability of food resources such as fungi and nematodes. Lower density of oribatid mites in monospecific clusters of lime and ash suggests that oribatid mites did not benefit from high quality litter of these species. Notably, large and strongly sclerotized oribatid mite species, such as Steganacarus magnus and Chamobates voigtsi, benefited from the presence of ash and lime. Presumably, these large species better resist harsh microclimatic conditions in shallow organic layers.     

Changes in the community structure and diversity of soil invertebrates across the Franz Josef Glacier chronosequence

Following the creation of new land surfaces, there is an initial build-up phase of ecosystem development, but after a prolonged absence of major disturbance a retrogressive (decline) phase often follows due to reduced nutrient availability over time. Although many studies have considered how the soil community changes during the build-up phase, the response of this community to the retrogressive phase is poorly known. We measured litter and soil communities of microfauna and macrofauna along the Franz Josef Glacier chronosequence in New Zealand that spans ca. 120,000 years, and includes well-established build-up and retrogressive stages. We aimed to assess whether the abundances, community structure and diversity of these groups show the same pattern across the sequence as that for vegetation. With regard to microfaunal abundances, litter-dwelling microbe-feeding nematodes were most abundant in the first stage of the chronosequence, but several other groups of microfauna in both the soil and litter increased sharply during the first few stages and declined sharply during the last (retrogressive) stages. The ratios of bacterial- to fungal-feeding nematodes in both soil and litter were lowest for the final stages of the chronosequence, and (in the case of soil) for some of the early stages, pointing to domination by the fungal-based energy channel at those stages for which soil organic matter content or quality were lowest. This is consistent with the fungal-based energy channel being better adapted than the bacterial-based channel for resource-poor conditions. The main groups of macroinvertebrates typically had their lowest abundances at the very early and late stages of the chronosequence, although the relative abundances of different taxa differed during the intermediate stages. Taxonomic diversity of nematodes and macroinvertebrates in both litter and soil varied strongly with chronosequence stage but differed among taxa; diversity of only one group (macroinvertebrates in litter) declined significantly during retrogression. Diversity of nematodes and macroinvertebrates along the sequence did not closely match tree diversity or soil chemical properties, but community composition of these groups was often related to tree community composition and ratios of soil C to N, C to P and N to P. Different groups of soil invertebrates show contrasting responses to chronosequence stage, probably because they differ in their relative response to bottom-up and top-down controls. However, the abundance of most groups increased during the build-up phase and declined during retrogression. As such, the build-up and decline phases observed for plant communities and ecosystem processes across long-term chronosequences also apply to soil communities, pointing to the importance of resource availability as a major driver of soil biota during long-term ecosystem change.     

Rate-specific responses of prokaryotic diversity and structure to nitrogen deposition in the Leymus chinensis steppe

Serious nitrogen (N) deposition in terrestrial ecosystems causes soil acidification and changes the structure and function of the microbial community. However, it is unclear how these changes are dependent on N deposition rates, other factors induced by N (e.g., pH), and their interactions. In this study, we investigated the responses of soil prokaryotic community structure and stability after a 13-year N addition in the semi-arid Leymus chinensis steppe in Inner Mongolia, China. Our results demonstrated that the prokaryotic community structure changed at the low N addition rate of 1.75 g N m⁻² yr⁻¹; however, dramatic changes in microbial abundance, respiratory quotient, and prokaryotic diversity occurred at N addition rates of more than 5.25 g N m⁻² yr⁻¹ when the soil pH dropped below 6.0. The two patterns indicated the difference in driving forces for different microbial properties. The N-driven and pH-driven processes are likely the most important mechanisms determining the responses of bacterial community to N. Some copiotrophic/oligotrophic bacteria, e.g., Proteobacteria and Acidobacteria, changed their relative abundances with the N addition continuously even at a low rate, indicating that they were more sensitive to N directly. Some bacterial groups significantly changed their relative abundance at a high N addition rate when pH dropped below 6.0, e.g., Verrucomicrobia and Armatimonadetes, indicating that they were more sensitive to pH below 6.0. N addition altered the prokaryotic community structure through enrichment of copiotrophic bacteria (species adjustment) at low N addition rates and through enrichment of nitrophilous taxa and significant loss of diversity at high N rates. The results also demonstrated that a high N addition diminished the stability of the prokaryotic community structure and activity through reduction in species diversity and bacterial interaction. Overall, this study supported the hypothesis that the responses of prokaryota to N were dependent on deposition rates, and N-driven and pH-driven processes were the important mechanisms to control the shift of the prokaryotic community.     

No evidence that nitrogen enrichment affect fungal communities of Vaccinium roots in two contrasting boreal forest types

In boreal forests ericaceous shrubs often dominate the forest floor vegetation. Nitrogen enrichment has been shown to decrease shrub abundance and in this study we explored whether it also affects the root associated fungal communities. Fine roots of Vaccinium myrtillus were collected in a Norway spruce dominated forest and of Vaccinium vitis-idaea in a Scots pine dominated forest. In both forests, nitrogen enrichment was experimentally induced by adding 12.5 and 50 kg N ha⁻¹ yr⁻¹ for 12 (spruce forest) and four (pine forest) years. Based on terminal restriction fragment length polymorphisms, subcloning and sequencing analyses, the root associated fungal communities were examined. We found 93 fungal species including Asco-, Basidio- and Zygo-mycota. In general, the Rhizoscyphus ericae aggregate was the most dominant and this was followed by Herpotrichiellaceae and Sebacina. Ordination analysis revealed that nitrogen enrichment did not change species composition of the fungal communities in neither the spruce nor the pine forest, while fungal community structures were clearly discriminated between the dominant shrub species in each forest. Similarly, no fungal species showed a significant response to nitrogen enrichment. Therefore, nitrogen enrichment appears to have no effect on root associated fungi of understorey dwarf shrubs in boreal forests, while it is clear that spruce and pine forests harbor distinctive communities of these fungi.     

棉花连作对北疆土壤酶活性、致病菌及拮抗菌多样性的影响

本文通过测定土壤酶活性与微生物PCR-DGGE指纹图谱研究了北疆棉区5年棉花连作(CtN5)、10年棉花连作(CtN10)及15年棉花连作(CtN15)对土壤过氧化氢酶、蔗糖酶、芳基硫酸酯酶、脱氢酶和蛋白酶酶活性的影响,分析了土壤细菌、真菌、镰刀菌和枯草芽孢杆菌群落结构多样性对北疆棉田长期连作的响应。结果表明:过氧化氢酶、蔗糖酶、脱氢酶活性随棉花连作年限延长而下降。CtN15处理的过氧化氢酶、蔗糖酶和脱氢酶活性分别比CtN10处理下降15.0%、6.4%和12.0%,比CtN5处理下降16.8%、58.6%和49.5%(P0.05);芳基硫酸酯酶与蛋白酶活性随连作年限的增加呈先下降后升高的特点。土壤细菌、真菌多样性指数随连作年限的增加明显下降。CtN15的细菌条带数比CtN10下降7.41%,Ct N10比CtN5降低1.72%。CtN15真菌条带数和Shannon-Wiener多样性指数分别为78和3.22,比CtN5处理低17.02%和5.29%。土壤镰刀菌和枯草芽孢杆菌的条带数、多样性指数均表现为先下降后升高。CtN15枯草芽孢杆菌Shannon-Wiener和Simpson指数分别比CtN10处理高54.8%和14.5%。北疆长期连作棉田的土壤酶活性和土壤微生物群落多样性总体呈下降趋势,长期连作对棉田土壤生物性状有明显负面影响。     

氮肥对稻田土壤反硝化细菌群落结构和丰度的影响

以氮肥田间定位试验为研究对象,利用PCR-DGGE(聚合酶链反应变性梯度凝胶电泳)和荧光定量PCR(real-time PCR)技术,通过对反硝化细菌nirS基因的检测,分析了定位试验第2年稻田反硝化细菌群落结构和丰度的变化。DGGE图谱及依据其条带位置和亮度数字化数值进行的主成分分析(PCA)结果均显示:在氮肥定位试验第2年,与不施肥对照(CK)比较,在水稻各个生育期(分蘖期、齐穗期和成熟期)内,施用氮肥[150kg(N)·hm-2]的稻田根层土或表土中的反硝化细菌群落结构均无明显变化;且稻田根层土或表土中的反硝化细菌群落结构在水稻各个生育期间也均无明显差异。荧光定量PCR结果显示,在水稻生长发育过程中,施用氮肥的稻田根层土或表土中的反硝化细菌nirS基因拷贝数始终显著(P<0.05)高于其对应的不施肥对照。此外,无论施用氮肥与否,根层土中的反硝化细菌nirS基因拷贝数在水稻成熟期时都会显著(P<0.05)降低;但表土中的nirS基因拷贝数在水稻各生育期间无明显变化;且水稻成熟期时施用氮肥和不施肥的稻田表土中nirS基因拷贝数都显著(P<0.05)高于根层土。同时,与对照比较施用氮肥可促进水稻增产44%。研究表明,短期定位试验中施用氮肥能够显著提高稻田土壤反硝化细菌的丰度,但对其群落结构没有明显影响。     

东莞低效荔枝林林下植被结构和多样性

对东莞大岭山撂荒的荔枝林(品种为“妃子笑”)林下植被进行样方调查, 分析了荔枝林林下植物群落的结构、多样性及生态位特征, 并提出撂荒荔枝林未来发展的对策。共记录到林下植被102 种, 隶属于50 科85 属。其中, 蕨类植物13 种, 隶属于9 科9 属; 双子叶植物65 种, 隶属于31 科52 属; 单子叶植物24 种, 隶属于10 科24 属。林下植被以灌木和乔木(幼苗)为优势生活型。灌木层与草本层物种多度分布差异不显著, 其物种丰富度、均匀度、Shannon-Wiener 指数、Simpson 指数差异亦均不显著。林下层优势物种中有春花(Raphiolepis indica)等8 种灌木, 芒萁(Dicranopteris dichotoma)等7 种草本, 玉叶金花(Mussaenda pubescens)等5 种藤本。灌木层主要种群的生态位宽度与生态位重叠值变化范围分别为0.909~1.450、0.567~0.955, 草本层分别为0.945~1.566、0.270~0.984。所调查的荔枝林林下自然演替的植被物种丰富, 区系成分为亚热带地带性种类, 结构亦较为复杂。因此, 在荔枝产业面临转型的阶段, 对于立地条件或荔枝品质较差不再经营的林分,可维持植被现状, 或向生态公益林方向改造, 以利于东莞荔枝产业的可持续发展。     

Differences in the activity and bacterial community structure of drained grassland and forest peat soils

The microbial activity and bacterial community structure were investigated in two types of peat soil in a temperate marsh. The first, a drained grassland fen soil, has a neutral pH with partially degraded peat in the upper oxic soil horizons (16% soil organic carbon). The second, a bog soil, was sampled in a swampy forest and has a very high soil organic carbon content (45%), a low pH (4.5), and has occasional anoxic conditions in the upper soil horizons due to the high water table level. The microbial activity in the two soils was measured as the basal and substrate-induced respiration (SIR). Unexpectedly, the SIR (μl CO₂ g⁻¹ dry soil) was higher in the bog than in the fen soil, but lower when CO₂ production was expressed per volume of soil. This may be explained by the notable difference in the bulk densities of the two soils. The bacterial communities were assessed by terminal restriction fragment length polymorphism (T-RFLP) profiling of 16S rRNA genes and indicated differences between the two soils. The differences were determined by the soil characteristics rather than the season in which the soil was sampled. The 16S rRNA gene libraries, constructed from the two soils, revealed high proportions of sequences assigned to the Acidobacteria phylum. Each library contained a distinct set of phylogenetic subgroups of this important group of bacteria.     

Oribatid mite and collembolan diversity, density and community structure in a moder beech forest (Fagus sylvatica): effects of mechanical perturbations

The effects of mechanical perturbations on two soil microarthropod communities (oribatid mites and collembolans) were investigated in a moder beech forest on sandstone. We disturbed the soil matrix by sieving and mixing the litter and soil of the moder profile. The top litter layer (L material) and the deep mineral soil (Bv) remained intact. Three amounts of disturbance were established: a single perturbation, perturbations once every 2 months (60 d) and once every 2 weeks (14 d). Densities of most groups of oribatid mites and all groups of collembolans declined in the disturbance treatments. In most cases, densities were lowest in the strong perturbation treatment (14 d). Desmonomata were the only group of oribatid mites that benefited from intermediate amounts of disturbance but not from the strongest disturbance. Also, disturbances reduced diversity of oribatid mites and collembolans. According to their sensitivity to disturbances oribatid mites ranked Poronota=Enarthronota=Suctobelbidae (the most sensitive)>Oppiidae>Tectocepheus>Desmonomata. The ranking of collembolans was Folsomia (the most sensitive)>Hypogastruridae/Neanuridae>Onychiuridae=Isotomidae>Entomobryidae. Generally, tolerance of disturbance was wider for oribatid mites than for collembolans. The results indicate that disturbances such as mixing of litter and soil and comminution of litter material strongly affect the density and diversity of soil microarthropods. However, they also indicate that the soil microarthropod community is resistant to weaker disturbances. In the field, mechanical disturbances are often caused by burrowing of earthworms. Our results suggest that the high density of microarthropods in moder soils may be due to the low intensities of mechanical disturbances by earthworms.     

稻虾共作对稻田土壤nirK反硝化微生物群落结构和多样性的影响

稻虾共作是水稻种植与克氏螯虾共作形成的互利共生的稻田种养复合生态模式。目前对稻虾共作模式稻田反硝化微生物多样性和群落结构的影响尚不清楚。本研究以江汉平原常规中稻模式(MR)为对照,设置连续3年(2014—2016年)稻虾共作模式(CR)为处理,通过特异引物提取中稻抽穗期稻田土壤nirK基因,采用Illumina Miseq高通量测序技术,探讨稻虾共作模式对稻田土壤nirK反硝化微生物多样性和群落结构的影响。结果表明:稻虾共作模式显著提升水稻抽穗期稻田土壤中硝态氮、全氮及全碳的含量,对土壤碳氮比、碱解氮和铵态氮含量没有显著影响。稻虾共作模式显著增加稻田土壤nirK基因微生物的丰富度指数,但对nirK基因微生物的多样性指数影响不显著。稻虾共作模式改变了nirK基因微生物在目、科、属、种水平的群落组成,较常规中稻模式,稻虾共作模式在各分类水平组成类群均减少;稻虾共作模式较常规中稻模式改变了目的种类,对共有目相对丰度没有显著性改变。RDA分析表明稻虾共作模式对土壤nirK基因菌群的群落结构有一定的改变,但稻虾共作模式与常规中稻模式在群落结构上仍保留着一定的相似性。硝态氮含量是影响nirK反硝化细菌群落结构的主效因子。可见,稻虾共作模式对微生物多样性指数没有显著影响,但显著增加了微生物丰富度指数,改变了稻田土壤nirK反硝化微生物在目、科、属、种的群落结构。