Non-native fish in the fresh waters of Portugal, Azores and Madeira Islands: a growing threat to aquatic biodiversity

Abstract  Portugal, the Azores, and Madeira had a combined total of twenty six non-native fish species introductions, with the mainland having the highest number (twenty three), followed by the Azores with ten and Madeira with two records. Fifteen of these species established in Portugal, six in the Azores and one in Madeira. The oldest known introduction (1792) was goldfish, Carassius auratus (L.), while the newest (2005) was tinfoil barb, Barbonymus schwanenfeldii (Bleeker). Ten species had been introduced in Portugal by the beginning of 20th century, but the rate of introduction continues to increase, with four species introduced since 2000. In mainland Portugal, the Douro, the Tejo and the Guadiana drainages had the highest number of introduction records, while the Lima and the Mira drainages had the fewest. Management measures are offered to reduce current rate of fish introductions in Portuguese watersheds.     

Freshwater fishes of Southeast Asia: potential for the aquarium fish trade and conservation issues

SoutheastAsia is an area rich in biodiversity, with a high degree ofendemism in both flora and fauna. Many freshwater fish specieshave been exploited for the ornamental fish trade. As thepopulation in South East Asia increases, vast tracts of forestsare cleared for agricultural, industrial and urbanizationpurposes. To conserve and sustainably exploit the wild fishpopulation, measures should be adopted to protect this naturalresource. Already, several ornamental species have been severelyoverexploited, e.g. bala shark (Balantiocheilos melanopterus),pygmy loach (Botia sidthimunki) and arowana (Scleropagesformosus), but the extirpation of local populations occurs formany reasons, including deforestation, and not just because offishing for the trade. There are also still many species thathave great ornamental fish potential. Wild fish species have alsobeen successfully bred in captivity and conserved, e.g. tigerbarb (Puntius tetrazona), bala shark, pygmy loach and arowana.Other methods of conservation include public education, leavingpristine forests intact and reforestation. The aquarium trade ofthe bala shark, harlequin rasbora (Rasbora heteromorpha), clownloach (Botia macracanthus), arowana and sawfish (Pristismicrodon) is discussed     

Harbour seal (Phoca vitulina) abundance within the Firth of Tay and Eden Estuary,Scotland: recent trends and extrapolation to extinction

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Variation in fish assemblages across dry-season pools in a Mediterranean stream: effects of pool morphology, physicochemical factors and spatial context

Pires DF, Pires AM, Collares-Pereira MJ, Magalhães MF. Variation in fish assemblages across dry-season pools in a Mediterranean stream: effects of pool morphology, physicochemical factors and spatial context. Ecology of Freshwater Fish 2010: 19: 74–86. © 2009 John Wiley & Sons A/S
Abstract –  Knowledge of patterns of refuge use by fish is critical for maintaining biodiversity in drought-prone streams. In this study, the fish assemblages of 21 dry-season pools in a Mediterranean stream were characterised and related to three sets of factors reflecting pool morphology, physicochemistry and spatial context. Fish were associated with the three sets of variables, with variation partitioning indicating that overall species richness and abundance were primarily related to pool morphology but relative species abundances were mainly associated with physicochemical contexts. In general, species richness was the highest but overall fish abundance was the lowest in large pools. Pools well shaded by riparian canopy held the highest richness and abundance of native fish, but relative species abundances and assembly structure varied among pools contingent on canopy cover, substrate composition and spatial location. These results suggested that conservation of fish diversity in Mediterranean streams requires networks of pools with diverse sizes and physicochemical contexts.     

Biodiversity,ecological status and conservation priority of the fish of the River Alaknanda,a parent stream of the River Ganges (India)

1. The River Alaknanda is a tributary of the River Ganges, originating from the Garhwal Himalaya in India and sustaining about 39 fish species from 15 genera and five families. 2. A diversity index has been calculated for the fish communities ranging from 0.407 to 0.593; no significant difference in diversity was noted at the three sampling sites which is attributed to the homogeneity of the ecological conditions. A similarity index was found to be high between the sampling sites and ranged from 93.47 to 100. 3. The categories of threats to the fish and priority for species conservation have been determined. Fourteen species were assigned as Abundant, seven species as Vulnerable, 15 species at Lower Risk, one species as Data Deficient while two species were assigned as Endangered. 4. The conservation of fish has been given little attention in India. The options for the conservation of the fish dwelling in the Alaknanda include ex situ and in situ conservation, habitat restoration, translocation and captive breeding. 5. The creation of fish sanctuaries and public awareness of the importance of fish species and their conservation will be critical for the proper conservation and management of the Garhwal Himalayan fish. Significantly, there are some parts of the river where fish are preserved out of religious sentiments. Careful nurturing of such sentiments may prove to be highly beneficial. © 1998 John Wiley & Sons, Ltd.     

Characterising reef fish populations and habitats within and outside the US Virgin Islands Coral Reef National Monument: a lesson in marine protected area design

Abstract  Marine protected areas are an important tool for management of marine ecosystems. Despite their utility, ecological design criteria are often not considered or feasible to implement when establishing protected areas. In 2001, the Virgin Islands Coral Reef National Monument (VICRNM) in St John, US Virgin Islands was established by Executive Order. The VICRNM prohibits almost all extractive uses. Surveys of habitat and fishes inside and outside of the VICRNM were conducted in 2002–2004. Areas outside the VICRNM had significantly more hard corals, greater habitat complexity, and greater richness, abundance and biomass of reef fishes than areas within the VICRNM. The administrative process used to delineate the boundaries of the VICRNM did not include a robust ecological characterisation of the area. Because of reduced habitat complexity within the VICRNM, the enhancement of the marine ecosystem may not be fully realised or increases in economically important reef fishes may take longer to detect.     

Conservation and management of the Arctic charr: a forward view

Abstract –  In this study, we synthesised the views of 34 participants in a workshop to consider the status and future conservation and management of the Arctic charr ( Salvelinus alpinus L.). These are expressed as a series of resolutions deriving from a conference on Arctic charr conservation held in Perth, Scotland in June 2004. Agreed resolutions from the conference were as follows. (i) The unique diversity of Arctic charr should be recognised for the contribution it makes to biodiversity of northern aquatic communities. (ii) The recognition by the public, nongovernmental organisations and national governments of the importance of Arctic charr in northern ecosystems is an important step to the management and protection that should be pursued. (iii) The taxonomic status of highly variable charr populations requires to be reviewed. (iv) There should be a separate system, complementary to the taxonomic one, which systematically catalogues the biological diversity of S. alpinus . (v) The Arctic charr provides a unique natural resource to study the process of evolution and this requires the highest level of protection from anthropogenic effects. (vi) The status of conservation policy for Arctic charr needs to be urgently reviewed to take account of its unique position in the fauna.     

Procedures for evaluating and prioritising the removal of fish passage barriers: a synthesis

Abstract Techniques for assessing the impact of structural barriers on fish passage and for prioritising restoration actions are reviewed. Current survey methodologies are biased towards specific structures, primarily culverts and economically significant fish. Assessment criteria are often based on swimming capabilities of upstream migrating adult salmonids, while ignoring other life‐stages, non‐salmonid species, downstream migration and behaviour. The development of comprehensive and centrally owned geospatial inventories of barriers is essential. The collection, maintenance and dissemination of pertinent structural and environmental data can be technically, logistically and financially challenging. Standardised procedures are needed to rapidly and cost‐effectively survey large numbers of barriers over wide geographic areas. The prioritisation of barrier repair and removal projects is most often based on simple cost‐benefit analysis, whereby individual barriers are scored based on a set of assessment criteria and then ranked in order of priority. The benefits of using scoring‐and‐ranking systems, however, are unacceptably low because they consider barriers independently, thereby ignoring the cumulative, non‐additive impacts produced by multiple, spatially interconnected structures. Optimisation modelling offers a more robust approach for efficiently prioritising decision making in river restoration planning, allowing decision makers to account for key uncertainties and effectively balance multiple, possibly competing, environmental and socioeconomic goals and constraints.     

Reproductive performance in induced and spontaneous spawning of the mangrove red snapper, Lutjanus argentimaculatus: a potential candidate species for sustainable aquaculture

A reliable breeding technique was developed for the mangrove red snapper, Lutjanus argentimaculatus (Forsskal 1775), to help sustain the aquaculture of this immensely popular species in Southeast Asia. Using standardized indices of female maturity (based on mean oocyte diameter of ≥0.40 mm), time of injection (1000–1130) and sex ratio (one female to two males), a single injection of 100 μg kg^?1 luteinizing hormone‐releasing hormone analogue (LHRHa) (n=16 fish), but not 50 μg kg^?1 (n=five fish), successfully induced egg (62.5% success rate) and larval (43.8%) production. Human chorionic gonadotropin (hCG) at 500 IU kg^?1 (n=five fish) also failed to induce spawning, but doses of 1000 (n=22 fish) and 1500 IU kg^?1 (n=15 fish) gave spawning (77.3% and 80.0% respectively) and hatching success rates (72.7% and 60.0% respectively) that were not significantly different from those of 100 μg kg^?1 LHRHa. No spawning was observed in saline‐injected controls (n=seven fish). While mean spawning latency, egg diameter, egg production per spawn, percent egg viability, hatching rate, percent of normal larvae and cumulative survival of eggs to normal larvae did not differ significantly among the effective hormones and doses, 1000 IU kg^?1 hCG had a higher percentage (76.5%) of total spawns with egg production per spawn in excess of one million than those of 1500 IU kg^?1 hCG (50.0%) and 100 μg kg^?1 LHRHa (40.0%). Mangrove red snapper spontaneously spawned from March–April to November–December with a peak of egg collection and spawning in May–June. Egg collection per spawn ranged from 0.05 to 6.35 million. Spontaneous spawning of mangrove red snapper exhibited lunar periodicity with spawns mostly occurring 3 days before or after the last quarter and new moon phases and occurred consistently between 02:00 and 04:00 hours. High fecundity and good egg quality, coupled with the ability to respond to induce spawning or natural spawning in captivity, provide a sound basis for improving the sustainability of red snapper aquaculture in Southeast Asia.     

Lactic acid bacteria vs. pathogens in the gastrointestinal tract of fish: a review

Intensive fish production worldwide has increased the risk of infectious diseases. However, before any infection can be established, pathogens must penetrate the primary barrier. In fish, the three major routes of infection are the skin, gills and gastrointestinal (GI) tract. The GI tract is essentially a muscular tube lined by a mucous membrane of columnar epithelial cells that exhibit a regional variation in structure and function. In the last two decades, our understanding of the endocytosis and translocation of bacteria across this mucosa, and the sorts of cell damage caused by pathogenic bacteria, has increased. Electron microscopy has made a valuable contribution to this knowledge. In the fish‐farming industry, severe economic losses are caused by furunculosis (agent, Aeromonas salmonicida spp. salmonicida) and vibriosis [agent, Vibrio (Listonella) anguillarum]. This article provides an overview of the GI tract of fish from an electron microscopical perspective focusing on cellular damage (specific attack on tight junctions and desmosomes) caused by pathogenic bacteria, and interactions between the ‘good’ intestinal bacteria [e.g. lactic acid bacteria (LAB)] and pathogens. Using different in vitro methods, several studies have demonstrated that co‐incubation of Atlantic salmon (Salmo salar L.) foregut (proximal intestine) with LAB and pathogens can have beneficial effects, the cell damage caused by the pathogens being prevented, to some extent, by the LAB. However, there is uncertainty over whether or not similar effects are observed in other species such as Atlantic cod (Gadus morhua L.). When discussing cellular damage in the GI tract of fish caused by pathogenic bacteria, several important questions arise including: (1) Do different pathogenic bacteria use different mechanisms to infect the gut? (2) Does the gradual development of the GI tract from larva to adult affect infection? (3) Are there different infection patterns between different fish species? The present article addresses these and other questions.     

Partial susceptibility of the SSN-1 fish cell line to a crustacean virus: a defective replication study

This study evaluated the possible use of the fish SSN-1 cell line to investigate the development of Macrobrachium rosenbergii nodavirus (MrNV). Cells were incubated with viral particles and cytopathic effects were observed. De novo synthesis of viral capsid proteins was shown by immuno-fluorescence labelling and a sandwich ELISA test. Viral genomic replication was demonstrated by RT-PCR using primers specific to RNA-1 as well as by quantitative RT-PCR (RT-qPCR). Using electron microscopy, only a few empty particles were observed and attempts to isolate complete infectious particles or to re-infect healthy cells (second passage) were unsuccessful. As complete viral particles were rarely observed, it appeared that defaults in MrNV virogenesis might arise resulting in the formation of scarce and non-infectious particles. SSN-1 cells were found to be partially permissive to MrNV infection that induced cell lysis, but key elements for viral infection were lacking such as regulatory factors for gene replication or post-translational modifications.     

Assessment of the removal efficiency of fish farm effluents by grey mullets: a nutritional approach

A field study was carried out to assess the use of the bottom‐feeding grey mullet (Mugil cephalus) within benthic enclosures as a means to reduce the benthic impacts of a net cage fish farm in the Gulf of Aqaba, Red Sea. Five experimental 1‐m³ net‐cage enclosures were stocked with 12 grey mullets each (fish weights 50, 70 or 144 g). The enclosures had no bottom and the mullets had access to the enclosed organically enriched sediments and to particulate matter (PM) falling from the overlying cages. Sediment traps were used to quantify and qualify the PM falling from the fish farm to the sea floor. Simultaneously, a feeding trial was performed with mullets (50 and 70 g) in experimental tanks. In order to estimate the potential growth rate and to quantify energy and protein requirements, the fish were fed a formulated diet with known composition. After approximately 70 days at sea, mullets in the enclosures had used up all the available food in the sediment and gained up to 0.78 g day^?1 fish^?1. Applying the values for energy and protein requirements for maintenance and growth derived from the experimental trial, estimates indicated that the grey mullets effectively removed 4.2 g organic carbon, 0.70 g nitrogen and 7.5 mg phosphorus kg^?1 mullet m^?2 day^?1 from the organically enriched sediment. Thus deployment of grey mullets may be an efficient means to improve the quality of sediments below intensive net‐cage fish farms.     

Fish biodiversity sampling in stream ecosystems: a process for evaluating the appropriate types and amount of gear

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Modelling stream fish species distribution in a river network: the relative effects of temperature versus physical factors

Abstract – The relative influence of temperature versus local physical factors on the spatial distribution of riverine fish species was investigated in a large watershed of south-western France. Using generalised additive models and hierarchical partitioning, we modelled the ecological responses of 28 fish species to a set of five environmental predictors, and we quantified the independent effect of each predictor. The spatial distribution of fish species was primarily determined by both mean temperature and position along the upstream–downstream gradient. However, responses to these environmental factors varied according to the species considered. Fish species with strong thermal requirements (e.g., common carp, black bullhead, Atlantic salmon) were mainly sensitive to temperature whereas longitudinal gradient was of primary importance for downstream species (e.g., common bream, largemouth bass, pike perch). Both the statistical methods used gave concordant results and appeared complementary. This dual-approach, quantifying the relative contribution of each environmental factor, appears particularly useful to understand the spatial distribution of stream fish species. Separating the effects of temperature versus habitat factors is crucial to accurately predict species distribution modifications in the current context of global change.     

Identification of a heparin-binding,mesoderm-inducing peptide in the swim-bladder of the red seabream,Pagrus major: a probable fish fibroblast growth factor

The brain, pituitary, liver, ovary and swim-bladder of the red seabream (Pagrus major) were screened for the presence of a growth factor capable of stimulating the proliferation of BHK-21 cells, and the swimbladder extract was found to exert the most powerful activity. Swim-bladder derived growth factor (SBDGF) with heparin-binding ability was isolated by heparin-affinity and size-exclusion chromatography using heparin-Sepharose CL-6B and Superose 12, respectively. The relative molecular mass of SBDGF was 22,500 and the isoelectric point was 9.4. The growth of mammalian fibroblasts (BALB/3c 3T3, BHK-21) and endothelial cells (CPAE) was markedly stimulated by SBDGF. Its growth-promoting activity was also effective in fish fibroblasts (BF-2 and RTG-2), and was heat- and acid-labile. In the mesoderm-induction assay, explants of presumptive ectoderm dissected from Xenopus laevis blastulae (stage 9) were incubated with SBDGF. SBDGF induced ventral mesoderm in the explants, including hemocyte-like cells, mesenchyme and coelomic epithelium. These properties suggest that SBDGF is a fish fibroblast growth factor and that the swim-bladder is the source.     

Implications of interannual variability in euphausiid population biology for fish production along the south-west coast of Vancouver Island: a synthesis

This is a synthesis of published and unpublished research on euphausiid and fish populations using the south-west coast of Vancouver Island. Overall, the studies covered 1985–98, when there were two ENSO events and considerable variation in upwelling. The population biology of the dominant euphausiids ( Thysanoessa spinifera , Euphausia pacifica ) was monitored during 1991–98. The species abundance trends differed. Results of simple correlation analyses suggested that variations in temperature, salinity and upwelling do not explain variations in the abundance of larval or adult euphausiids, or in the abundance of portions of euphausiid populations on which fish feed. I found significant interannual variations in daily ration of the dominant planktivorous fish species, but euphausiids remained the most important prey. Pacific hake ( Merluccius productus ), the dominant planktivore, fed on larger (>17 mm) T. spinifera , even though the biomass of this part of the euphausiid biomass decreased by 75% between 1991 and 1997, but Pacific herring ( Clupea pallasi ) may have begun feeding on smaller E. pacifica . Therefore, any study of the relationship between fish production and krill biology must consider that part of the euphausiid biomass exploited by fish. In addition, some fish species and/or life history stages appeared to adapt to changes in euphausiid availability, while others did not. Such variation in adaptations also has to be described and considered to understand how changes in euphausiid biology affect fish productivity.     

Development of a microsatellite multiplex genotyping tool for the fish Gilthead seabream (Sparus aurata): applicability in population genetics and pedigree analysis

In spite of the numerous studies performed in the aquacultured fish gilthead seabream, the overall structure of wild and cultivated stocks is rather confusing. In this study, we developed a 10 microsatellite genotyping tool SaGT(6+4), conformed by two polymerase chain reaction‐multiplex reactions (SaGT6 and SaGT4), which can be simultaneously combined in automatic sequencers. The utility of this tool was proven through the following applications: (i) characterization and differentiation of wild and cultivated populations; (ii) pedigree reconstruction and estimation of the effective size in a cultivated stock; (iii) ability for pedigree reconstruction under different simulated situations; and (iv) determination of genetic relationships in the absence of data from parents. Based on our results, some recommendations have been provided on the management of the screened stocks. Our results also support the use of this tool in a standardized way, to understand the actual status of gilthead seabream from both wild and cultivated populations.     

Climate‐driven population dynamics of a North American freshwater fish,Ictalurus furcatus: inference from the mitochondrial control region sequence data

Abstract – Using the Bayesian coalescent methodology and mitochondrial control region sequence data, the present study reconstructs the dynamics of effective population size of a temperature‐driven seasonal migratory North American freshwater fish, Ictalurus furcatus, during the last glacial cycle. The trend in effective population size is directly associated with the trend in surface air temperature; it is inversely associated with the accumulation of ice sheets in North America during the contemporary period. The long‐term decrease in effective population size during the cold period followed by rebound during the warmer period could be explained by this species’ preference for relatively warmer temperatures for its optimal growth and survival.