Spatial variability of enzyme activities and microbial biomass in the upper layers of Quercus petraea forest soil

Extracellular lignocellulose-degrading enzymes are responsible for the transformation of organic matter in hardwood forest soils. The spatial variability on a 12 × 12 m plot and vertical distribution (0–8 cm) of the ligninolytic enzymes laccase and Mn-peroxidase, the polysaccharide-specific hydrolytic enzymes endoglucanase, endoxylanase, cellobiohydrolase, 1,4-β-glucosidase, 1,4-β-xylosidase and 1,4-β-N-acetylglucosaminidase and the phosphorus-mineralizing acid phosphatase were studied in a Quercus petraea forest soil profile. Activities of all tested enzymes exhibited high spatial variability in the L and H horizons. Acid phosphatase and 1,4-β-N-acetylglucosaminidase exhibited low variability in both horizons, while the variability of Mn-peroxidase activity in the L horizon, and endoxylanase and cellobiohydrolase activities in the H horizon were very high. The L horizon contained 4× more microbial biomass (based on PLFA) and 7× fungal biomass (based on ergosterol content) than the H horizon. The L horizon also contained relatively more fungi-specific and less actinomycete-specific PLFA. There were no significant correlations between enzyme activities and total microbial biomass. In the L horizon cellulose and hemicellulose-degrading enzymes correlated with each other and also with 1,4-β-N-acetylglucosaminidase and acid phosphatase activities. Laccase, Mn-peroxidase and acid phosphatase activities correlated in the H horizon. The soil profile showed a gradient of pH, organic carbon and humic compound content, microbial biomass and enzyme activities, all decreasing with soil depth. Ligninolytic enzymes showed preferential localization in the upper part of the H horizon. Differences in enzyme activities were accompanied by differences in the microbial community composition where the relative amount of fungal biomass decreased and actinomycete biomass increased with soil depth. The results also showed that the vertical gradients occur at a small scale: the upper and lower parts of the H horizon only 1 cm apart were significantly different with respect to seven out of nine activities, microbial biomass content and community composition.     

Determination of microbial biomass and fungal and bacterial distribution in cattle faeces

As an important component of organic fertilizers, animal faeces require methods for determining diet effects on their microbial quality to improve nutrient use efficiency in soil and to decrease gaseous greenhouse emissions to the environment. The objectives of the present study were (i) to apply the chloroform fumigation extraction (CFE) method for determining microbial biomass in cattle faeces, (ii) to determine the fungal cell-membrane component ergosterol, and (iii) to measure the cell-wall components fungal glucosamine and bacterial muramic acid as indices for the microbial community structure. Additionally, ergosterol and amino sugar data provide independent control values for the reliability of the microbial biomass range obtained by the CFE method. A variety of extractant solutions were tested for the CFE method to obtain stable extracts and reproducible microbial biomass C and N values, leading to the replacement of the original 0.5 M K₂SO₄ extractant for 0.05 M CuSO₄. The plausibility of the data was assessed in a 28-day incubation study at 25 °C with cattle faeces of one heifer, where microbial biomass C and N were repeatedly measured together with ergosterol. Here, the microbial biomass indices showed dynamic characteristics and possible shifts in the microbial community. In faeces of five different heifers, the mean microbial biomass C/N ratio was 5.6, the mean microbial biomass to organic C ratio was 2.2%, and the mean ergosterol to microbial biomass C ratio was 1.1‰. Ergosterol and amino sugar analysis revealed a significant contribution of fungi, with a percentage of more than 40% to the microbial community. All three methods are expected to be suitable tools for analysing the quality of cattle faeces.     

Particle size fractionation of fungal and bacterial biomass in subalpine grassland and forest soils

Characterization of soil aggregates according to particle size fractions is a useful tool in process-oriented research into soil organic matter and biological properties. Substrate-induced respiration (SIR) inhibition was used to quantify microbial, fungal and bacterial biomass in particle size fractions of soils ranging from forest to grassland in a subalpine region of central Taiwan. In addition, ergosterol content was determined in the same samples to verify fungal biomass measured by SIR inhibition technique. Surface soil (0–10 cm) was fractionated into four particle size fractions: coarse sand (250–2000 μm), fine sand (53–250 μm), silt (2–53 μm) and clay (0.2–2 μm). The larger sized fractions (>250 μm and 53–250 μm) contained higher levels of fungal ergosterol than the smaller sized ones (2–53 μm and 0.2–2 μm). The largest particle size fraction (250–2000 μm) from all studied habitats showed the highest level of microbial biomass, with no clear trend in microbial biomass level among the other size fractions. SIR-calculated fungal biomass level and ergosterol converted fungal biomass content were positively correlated (r=0.71, p<0.05), and such correlation decreased as biomass levels were high. Ratios of fungi to bacteria ranged between 0.6 and 1.3 in fractions obtained in this study. This study indicates a high variability of microbial (fungal and bacterial) biomass level among particle size fractions in soil, and that the large-sized fractions tend to contain a high level of microbial biomass in a given ecosystem.     

Soil carbon sequestration and changes in fungal and bacterial biomass following incorporation of forest residues

Sequestering carbon (C) in forest soils can benefit site fertility and help offset greenhouse gas emissions. However, identifying soil conditions and forest management practices which best promote C accumulation remains a challenging task. We tested whether soil incorporation of masticated woody residues alters short-term C storage at forested sites in western and southeastern USA. Our hypothesis was that woody residues would preferentially stimulate soil fungal biomass, resulting in improved C use efficiency and greater soil C storage. Harvest slash at loblolly pine sites in South Carolina was masticated (chipped) and either (1) retained on the soil surface, (2) tilled to a soil depth of 40 cm, or (3) tilled using at least twice the mass of organics. At comparative sites in California, live woody fuels in ponderosa pine stands were (1) masticated and surface applied, (2) masticated and tilled, or (3) left untreated. Sites with clayey and sandy soils were compared in each region, with residue additions ranging from 20 to 207 Mg ha⁻¹. Total and active fungal biomass were not strongly affected by residue incorporation despite the high input of organics. Limited response was also found for total and active bacterial biomass. As a consequence, fungal:bacterial (F:B) biomass ratios were similar among treatments at each site. Total soil C was elevated at one California site following residue incorporation, yet was significantly lower compared to surface-applied residues at both loblolly pine sites, presumably due to the oxidative effects of tilling on soil organic matter. The findings demonstrated an inconsequential effect of residue incorporation on fungal and bacterial biomass and suggest a limited potential of such practices to enhance long-term soil C storage in these forests.     

Spatial changes of soil fungal and bacterial biomass from a sub-alpine coniferous forest to grassland in a humid, sub-tropical region

 Fungal and bacterial biomass were determined across a gradient from a forest to grassland in a sub-alpine region in central Taiwan. The respiration-inhibition and ergosterol methods for the evaluation of the microbial biomass were compared. Soil fungal and bacterial biomass both significantly decreased (P<0.05) with the shift of vegetation from forest to grassland. Fungal and bacterial respiration rates (evolved CO₂) were, respectively, 89.1 μl CO₂ g^–1 soil h^–1 and 55.1 μl CO₂ g^–1 soil h^–1 in the forest and 36.7 μl CO₂ g^–1 soil h^–1 and 35.7 μl CO₂ g^–1 soil h^–1 in the grassland surface soils (0–10 cm). The fungal ergosterol content in the surface soil decreased from the forest zone (108 μg g^–1) to the grassland zone (15.9 μg g^–1). A good correlation (R ²=0.90) was exhibited between the soil fungal ergosterol content and soil fungal CO₂ production (respiration) for all sampling sites. For the forest and grassland soil profiles, microbial biomass (respiration and ergosterol) declined dramatically with depth, ten- to 100-fold from the surface organic horizon to the deepest mineral horizon. With respect to fungal to bacterial ratios for the surface soil (0–10 cm), the forest zone had a significantly (P<0.05) higher ratio (1.65) than the grassland zone (1.05). However, there was no fungal to bacterial ratio trend from the surface horizon to the deeper mineral horizons of the soil profiles. Received: 30 March 2000     

Long term repeated burning in a wet sclerophyll forest reduces fungal and bacterial biomass and responses to carbon substrates

Soils from a long term experiment, established in 1972, incorporating replicated treatments of burning every 2 and 4 years with control plots were sampled in 2005 to determine the changes in microbial community structure, measured using phospholipid fatty acids (PLFAs) and functional diversity measured using multiple substrate induced respiration (SIR) tests (MicroResp™). Microbial biomass (total PLFA) in the 2 year burn treatments was 50% less than both the control and 4-year burn treatments. There was also concomitantly less respiratory activity which mirrored the known changes in soil C and substrate quality. Contrary to other studies soil bacterial PLFAs were reduced as much as fungal PLFAs in the 2-year burn and the short term (6 h) SIR of arginine, lysine, galactose and trehalose were significantly inhibited in the 2-year burn soils. The data suggest that a 4-year burn is a more sustainable practice for maintaining the original structure and function of the forest belowground ecosystem.     

Soil fungal biomass after clear-cutting of a pine forest in central sweden

The effect of clear-cutting on fluorescein diacetate (PDA) active and total fungal biomass was studied in three soil horizons of a coniferous forest in Sweden. Throughout the soil profile, fungal biomass decreased after felling. FDA-active hyphae decreased more in the mineral soil than in the organic soil. The effect of felling residues left at the time of clear-cutting appeared to be of only minor importance, since the decrease in fungal content was independent of the amount of slash left on the ground. However, the addition of slash generally gave greater amounts of FDA-active fungal mycelium compared to the treatment without slash. The change in root dynamics is suggested to be an important reason for the decrease of fungal hyphae in forest soil after clear-cutting.     

Nitrous oxide production in soils and the ratio of the fungal to bacterial biomass

The proportion between the fungal and bacterial biomass, the potential activity of denitrification, and the intensity of N₂O production were determined in the soils (chernozem and soddy-podzolic) of secondary biocenoses formed upon the abandoning of agricultural lands. The substitution of meadow and forest vegetation for agrocenoses has led to an increase in the percentage of the fungal biomass in the upper soil horizons. The rate of the net N₂O production after the soil moistening positively correlated with the content of nitrates. In the soddy-podzolic soil (pH 3.7–5.6), the rate of nitrous oxide production was higher than that in the chernozem (pH 6.1–6.8). The rate of N₂O production was inversely proportional to the bacterial biomass in the soils.     

Methyl-mercury affects microbial activity and biomass,bacterial community structure but rarely the fungal community structure

Monomethyl-mercury is one of the most toxic compounds. Methylation of Hg usually appears under anoxic conditions. In Swiss forest soils, methyl-Hg concentrations of up to 3 μg kg⁻¹ soil dw have been observed, but the impact of methyl-Hg on soil microorganisms have rarely been examined so far. In this study, we investigated the effect of increasing concentrations of methyl-Hg (0, 5, 20, 90 μg kg⁻¹ soil dw) on the microbial communities in various forest soils differing in their physico-chemical properties. Experiments were conducted in microcosms under controlled conditions and the basal respiration (BR), the microbial biomass carbon (MBC) and the bacterial and fungal community structures using T-RFLP-profiling were investigated. BR was significantly affected by methyl-Hg. In general, the BR increased with increasing methyl-Hg concentrations, whereas the MBC was significantly reduced. Bacterial communities were more sensitive to methyl-Hg than fungal communities. In five out of seven soils, the bacterial community structures differed significantly between the treatments whereas the fungal communities did not. The impact of methyl-Hg on the soil bacterial communities was site specific. In one soil, a methyl-Hg concentration of already 5 μg kg⁻¹ soil dw significantly affected the relative abundance of 13% bacterial operational taxonomic units (OTU), whereas in other soils concentrations of even 90 μg kg⁻¹ soil dw rarely affected the abundance of OTUs. In this study, for the first time, the impact of methyl-Hg on soil bacterial and fungal communities in forest soils was assessed. We showed that its impact strongly depends on the physico-chemical conditions of the soil and that bacterial communities were more sensitive to methyl-Hg than fungi.     

The use of phospholipid fatty acid analysis to estimate bacterial and fungal biomass in soil

The cell content of 12 bacterial phospholipid fatty acids (PLFA) was determined in bacteria extracted from soil by homogenization/centrifugation. The bacteria were enumerated using acridine orange direct counts. An average of 1.40×10^-17 mol bacterial PLFA cell^-1 was found in bacteria extracted from 15 soils covering a wide range of pH and organic matter contents. With this factor, the bacterial biomass based on PLFA analyses of whole soil samples was calculated as 1.0–4.8 mg bacterial C g^-1 soil C. The corresponding range based on microscopical counts was 0.3–3.0 mg bacterial C g^-1 soil C. The recovery of bacteria from the soils using homogenization/centrifugation was 2.6–16% (mean 8.7%) measured by PLFA analysis, and 12–61% (mean 26%) measured as microscopical counts. The soil content of the PLFA 18:26 was correlated with the ergosterol content (r=0.92), which supports the use of this PLFA as an indicator of fungal biomass. The ratio 18:26 to bacterial PLFA is therefore suggested as an index of the fungal:bacterial biomass ratio in soil. An advantage with the method based on PLFA analyses is that the same technique and even the same sample is used to determine both fungi and bacteria. The fungal:bacterial biomass ratio calculated in this way was positively correlated with the organic matter content of the soils (r=0.94).     

Effect of arsenic contamination on bacterial and fungal biomass and enzyme activities in tropical arsenic-contaminated soils

The importance of assessing the impacts of soil arsenic (As) contamination on microbial properties lay on the fact that microbes are instrumental in nutrient cycling and are therefore indicators of soil quality. In this study, soil chemical extraction methods were used to extract labile and freely exchangeable As (water-soluble As and sodium bicarbonate-extractable As), amorphous/crystalline Fe and Mn oxide-bound As (acid ammonium oxalate-extractable As and hydroxylamine hydrochloride-extractable As), and their impacts on microbial biomass (microbial biomass C, total bacterial and fungal biomass, active bacterial and fungal biomass), enzyme activities representing four major soil biogeochemical cycles, i.e., C (β-glucosidase activity), N (urease activity), P (acid phosphomonoesterase activity), S (acryl-sulfatase activity), and microbial activity (fluorescein diacetate hydrolysis and dehydrogenase activity) were investigated in As-contaminated soils of Ambagarh Chauki block, Chhattisgarh, Central India. The results revealed that the majority of the As in soils resided in the Fe/Mn oxide-bound fraction. The microbial biomass C, total and active fungal biomass, and enzyme activities were significantly inhibited by all the forms of As. However, water-soluble As, even though occupying only a small portion of the total As (0.9–2.9 %), exerted the greatest impact. Interestingly, total and active bacterial biomass was not significantly affected by As toxicity, suggesting their resistance to As. Urease activity was not affected by As pollution.     

Predation on fungal and bacterial biomass in a soddy-podzolic soil amended with starch,wheat straw and alfalfa meal

The variation in bacterial, fungal and total microbial biomass and activity was studied together with the abundance of soil nematodes and microarthropods after the addition of substrates differing in nitrogen availability to a soddy-podzolic soil. The experiments were carried out in microcosms with native and defaunated soil to evaluate stimulatory and suppressive effects of the microfauna on soil micro-organisms. Predation by microfauna (nematodes) and mesofauna (microarthropods) reduced the microbial biomass and microbial respiration by approximately 25% after addition of nitrogen rich alfalfa meal. When starch and wheat straw were supplied, the microbial biomass and activity were stimulated by up to 30% by grazing. Thus, the effect of predation on the microbiota depended on the composition of the available substrates and available nitrogen seems to be an important factor controlling stimulation or suppression of soil micro-organisms by the soil fauna when fresh organic compounds are accessible. The presence of soil fauna stimulated bacteria and, thus, reduced the fungal/bacterial ratio during the course of decomposition. In contrast, the fungal/bacterial ratio declined due to decreasing fungal biomass in defaunated soil.     

Nutrient limitations to bacterial and fungal growth during cellulose decomposition in tropical forest soils

Nutrients constrain the soil carbon cycle in tropical forests, but we lack knowledge on how these constraints vary within the soil microbial community. Here, we used in situ fertilization in a montane tropical forest and in two lowland tropical forests on contrasting soil types to test the principal hypothesis that there are different nutrient constraints to different groups of microorganisms during the decomposition of cellulose. We also tested the hypotheses that decomposers shift from nitrogen to phosphorus constraints from montane to lowland forests, respectively, and are further constrained by potassium and sodium deficiency in the western Amazon. Cellulose and nutrients (nitrogen, phosphorus, potassium, sodium, and combined) were added to soils in situ, and microbial growth on cellulose (phospholipid fatty acids and ergosterol) and respiration were measured. Microbial growth on cellulose after single nutrient additions was highest following nitrogen addition for fungi, suggesting nitrogen as the primary limiting nutrient for cellulose decomposition. This was observed at all sites, with no clear shift in nutrient constraints to decomposition between lowland and montane sites. We also observed positive respiration and fungal growth responses to sodium and potassium addition at one of the lowland sites. However, when phosphorus was added, and especially when added in combination with other nutrients, bacterial growth was highest, suggesting that bacteria out-compete fungi for nitrogen where phosphorus is abundant. In summary, nitrogen constrains fungal growth and cellulose decomposition in both lowland and montane tropical forest soils, but additional nutrients may also be of critical importance in determining the balance between fungal and bacterial decomposition of cellulose.     

Effect of fungal to bacterial biomass ratio on the relationship between CO2 evolution and total soil microbial biomass

The relationship between the fungal: bacterial biomass ratio and the metabolic quotient (qCO₂) was studied in three different soils. In addition, the effect of the fungal: bacterial biomass ratio on the relationship between CO₂ evolution and the size of the soil microbial biomass was examined. Soil samples were collected from three experimental fields amended with various organic materials (Yatsugatake, Ibaraki, and Tochigi fields). The range of the fungal:bacterial biomass ratio in the Yatsugatake and Ibaraki fields was small (1.54–2.24 and 1.11–1.71, respectively), but it was large in the Tochigi field (1.18–3.75). We found a high negative correlation between this ratio and the metabolic quotient (qCO₂=2.10–0.361 (fungal:bacterial biomass ratio), R=–0.851, P<0.01) in the Tochigi field. Therefore, we suggest tha qCO₂ decreases with an increase in the fungal:bacterial biomass ratio, which may be due to a higher efficiency of substrate C use by fungal flora in comparison with bacterial flora. In the Yatsugatake and Ibaraki fields, there was a high positive correlation between CO₂ evolution and total microbial biomass. In contrast, no correlation was observed between these two parameters in the Tochigi field, probably reflecting the wide range of values for the fungal:bacterial biomass ratio. From the results obtained, we suggest that the fungal: bacterial biomass ratio is an important factor regulating the relationship between CO₂ evolution and the size of the microbial biomass.     

Soil microbial biomass and bacterial and fungal community structures responses to long-term fertilization in paddy soils

Purpose

Long-term fertilization can influence soil biological properties and relevant soil ecological processes with implications for sustainable agriculture. This study determined the effects of long-term (>25 years) no fertilizer (CK), chemical fertilizers (NPK) and NPK combined with rice straw residues (NPKS) on soil bacterial and fungal community structures and corresponding changes in soil quality.

Materials and methods

Soil samples were collected from a long-term field site in Wangcheng County established in 1981 in subtropical China between mid summer and early autumn of 2009. Terminal restriction fragment length polymorphism (T-RFLP) and the real-time quantitative polymerase chain reaction (real-time qPCR) of bacterial and fungal community and microbial biomass (MB-C, -N and -P) were analyzed.

Results and discussion

Redundancy analysis of the T-RFLP data indicated that fertilization management modified and selected microbial populations. Of the measured soil physiochemical properties, soil organic carbon was the most dominant factors influencing bacterial and fungal communities. The bacterial and fungal diversity and abundance all showed increasing trends over time (>25 years) coupling with the increasing in SOC, total N, available N, total P, and Olsen P in the fertilized soils. Compared to chemical fertilizer, NPKS resulted in the greater richness and biodiversity of the total microbial community, soil organic C, total N, MB-C, -N and -P. The high biodiversity of microbial populations in NPKS was a clear indication of good soil quality, and also indicated higher substrate use efficiency and better soil nutrient supplementation. Otherwise, unfertilized treatment may have a soil P limitation as indicated by the high soil microbial biomass N: P ratio.

Conclusion

Our results suggest that NPKS could be recommended as a method of increasing the sustainability of paddy soil ecosystems.     

Microbial biomass and bacterial functional diversity in forest soils: effects of organic matter removal, compaction, and vegetation control

The effects of organic matter removal, soil compaction, and vegetation control on soil microbial biomass carbon, nitrogen, C-to-N ratio, and functional diversity were examined in a 6-year loblolly pine plantation on a Coastal Plain site in eastern North Carolina, USA. This experimental plantation was established as part of the US Forest Service's Long Term Soil Productivity Study. Sampling was undertaken on eight treatments within each of three blocks. Treatments sampled included main 2×2 factorial treatments of organic matter removal (stem-only or complete tree plus forest floor) and compaction (none or severe) with split-plot treatment of vegetation control (none or total vegetation control). Two blocks were located on a somewhat poorly drained, fine-loamy, siliceous, thermic aeric Paleaquult (Lynchburg soil) and one on a moderately well drained, fine-loamy, siliceous, thermic aquic Paleudult (Goldsboro soil). Soil microbial C and N were positively related with soil C and N, respectively. Microbial C and N on the Lynchburg soil were higher than those on the Goldsboro soil. Organic matter removal decreased microbial N. Compaction reduced microbial C-to-N ratio. Vegetation control decreased microbial C and C-to-N ratio. The number of C compounds utilized by bacteria was not affected by soil type or treatment. However, soil types and treatments changed bacterial selections for a few C compounds on BIOLOG plates. Soil microbial properties varied more due to the natural soil differences (soil type) as compared with treatment-induced differences.     

Microbial enzyme activities,fungal biomass and quality of the litter and upper soil layer in a beech forest of south Italy

Forest soils contain a large amount of organic matter (OM) and therefore represent a considerable carbon reserve. The amount of OM sequestered in the soil is dependent on annual input of litter and its quality. The aim of this study was to investigate the quantity and quality of OM, the microbial capacity to degrade it and its recalcitrance to further degradation, by considering some extracellular enzyme activities in a beech (Fagus sylvatica L.) forest in south Italy (Mediterranean area). Our attention was focused on the decomposition continuum of the litter horizon and upper soil layer. Because fungi are the major decomposers of plant material, fungal biomass was also measured and its relationship with enzyme activities was tested. The results showed that: (i) the litter horizon and the upper soil layer differed in chemical characteristics and biological activities; (ii) within the litter horizon, the three layers detected for their different degree of degradation (L, recently fallen, not decomposed and not compressed material; F, partially decomposed and fragmented but macroscopically recognizable material; H, compressed and strongly fragmented) differed more in chemical characteristics than in biological activities; (iii) the enzyme activities and fungal biomass changed during the study period but a clear relationship with succession of seasons was evident only for cellulase, laccase, peroxidase and fungal biomass; and (iv) the upper soil layer included 42% OM and less than 50% of that was susceptible to further decomposition. This percentage was 30% in the OM of L.     

中国北方森林坡向对土壤细菌和从枝菌根真菌群落的影响

The effects of slope aspects on soil biogeochemical properties and plant communities in forested environments have been studied extensively; however, slope aspect influence on soil microbial communities remains largely unexamined, despite the central role of soil biota in ecosystem functioning. In this study, the communities of both soil bacteria and arbuscular mycorrhizal fungi (AMF) were investigated using tagged pyrosequencing for three types of slope aspects (south-facing aspect, north-facing aspect and flat area) in a boreal forest of the Greater Khingan Mountains, China. The bacterial and AMF community composition differed with slope aspects. Bacterial diversity was the lowest on the north-facing aspect, and AMF diversity was the lowest on the flat area. Aspects also had a significant impact on soil pH and available phosphorus (P) and shrubby biomass. Soil pH and understory shrub biomass were significantly correlated with bacterial communities, and soil available P and shrub biomass showed significant correlations with AMF communities. Our results suggested that slope aspects affected bacterial and AMF communities, mediated by aspect-induced changes in plant community and soil chemical properties (e.g., pH and available P), which improved the knowledge on the effects of forest slope aspects on aboveground and belowground communities.     

Influence of the species and geographical location on volatile composition of Spanish oak wood (Quercus petraea Liebl. and Quercus robur L.)

The influence of the species and geographical origin on the volatile composition of wood samples from 80 Spanish oaks (55 Quercus petraea Liebl. and 25 Quercus robur L.) has been studied. Oak volatile components were isolated by simultaneous distillation-extraction and analyzed by gas chromatography-mass spectrometry. cis- and trans-beta-methyl-gamma-octalactones were the main constituents, the cis stereoisomer being predominant. Other important volatile components were furfural, 5-methylfurfural, guaiacol, eugenol, vanillin, or syringaldehyde. The main differences were established between species, Quercus petraea being significantly richer in volatile compounds than Quercus robur; however, the variability found among trees was high. Differences among geographical provenances were much less important than those found between species.     

Altered precipitation seasonality impacts the dominant fungal but rare bacterial taxa in subtropical forest soils

How soil microbial communities respond to precipitation seasonality change remains poorly understood, particularly for warm-humid forest ecosystems experiencing clear dry-wet cycles. We conducted a field precipitation manipulation experiment in a subtropical forest to explore the impacts of reducing dry-season rainfall but increasing wet-season rainfall on soil microbial community composition and enzyme activities. A 67% reduction of throughfall during the dry season decreased soil water content (SWC) by 17–24% (P < 0.05), while the addition of water during the wet season had limited impacts on SWC. The seasonal precipitation redistribution had no significant effect on the microbial biomass and enzyme activities, as well as on the community composition measured with phospholipid fatty acids (PLFAs). However, the amplicon sequencing revealed differentiated impacts on bacterial and fungal communities. The dry-season throughfall reduction increased the relative abundance of rare bacterial phyla (Gemmatimonadetes, Armatimonadetes, and Baoacteriodetes) that together accounted for only 1.5% of the total bacterial abundance by 15.8, 40, and 24% (P < 0.05), respectively. This treatment also altered the relative abundance of the two dominant fungal phyla (Basidiomycota and Ascomycota) that together accounted for 72.4% of the total fungal abundance. It increased the relative abundance of Basidiomycota by 27.4% while reduced that of Ascomycota by 32.6% (P < 0.05). Our results indicate that changes in precipitation seasonality can affect soil microbial community composition at lower taxon levels. The lack of community-level responses may be ascribed to the compositional adjustment among taxonomic groups and the confounding effects of other soil physicochemical variables such as temperature and substrate availability.