Crop rotation in no‐till soils modifies the soil fatty acids signature

Analysis of whole‐soil fatty acids (WSFA ) was used to characterize no‐till productive agricultural soils associated with different crop rotation managements on the Argentinean pampas, over two sampling seasons. Crop rotation (CR ) treatment was compared with soybean monocropping (MC ). Soils from nearby natural environments (NE ) were used as reference treatments. The objective of this study was to characterize the soil lipid signature and seek putative markers of agricultural management. NE sites had greater concentration of total WSFA than agricultural sites, but no differences between CR and MC were identified. NE sites were characterized by straight chain and mono‐unsaturated fatty acids, such as 16:1 ω5c , an established biomarker for arbuscular mycorrhiza. Comparing lipid profiles using multivariate methods allowed a comprehensive comparison among treatments. The CR and NE soil samples were more alike than those of MC , with several fatty acids in common. CR soils were associated with mixed, branched and hydroxylated fatty acids. MC profiles appeared to be enriched by 16:010Me and 18:1 ω7c fatty acids, which could be potential treatment markers. Thus, use of the WSFA approach to study soil lipid signature appeared to be a sensitive method to characterize soil health and soil use and management. However, some of the fatty acids do not come from living cells but from soil organic matter, which sets a limitation on interpretation in terms of the microbial community but expands the biological origin of the soil lipid signature to any biological matter, alive or death, which is a constitutive part of the soil under study.     

Crop rotation and seasonal effects on fatty acid profiles of neutral and phospholipids extracted from no‐till agricultural soils

Analysis of phospholipids (PLFA) and neutral lipids fatty acids (NLFA) was used to characterize no‐till productive agricultural soils associated with different crop rotation levels, replicated across a 400 km transect in the Argentinean pampas, during two sampling seasons, summer and winter. High rotation (HR) management consisted in maize–wheat–soybean intense rotation including cover crops. Low rotation (LR) management trend to soybean monocultures. Soils from nearby natural environments (NEs) were used as references. Fatty acids concentration in soils (nmol/g) decreased c.a. 50% from summer to winter differentially according to soil treatment being the smallest decrease in HR management 35%. Both PLFA and NLFA profiles showed strong potential to discriminate between different land uses. In winter samples, some rare or unknown fatty acids were relevant for the discrimination of agricultural practices while NLFA 20:0 appears to be a good marker of HR soils despite season or location. The PLFA‐based taxonomic biomarkers for total bacteria, Gram‐negative bacteria and arbuscular mycorrhiza showed a significant trend NE>HR>LR in the winter sampling. HR management was also characterized by high levels of NLFA in winter samples as if high crop rotation improves lipids reserves in soil during winter more than in monocropping soil management. In conclusion, PLFA and particularly NLFA profiles appear to provide useful and complementary information to obtain a footprint of different soil use and managements, improving soil biochemistry characterization tools.     

Diversity patterns of indigenous arbuscular mycorrhizal fungi associated with rhizosphere of cowpea (Vigna unguiculata (L.) Walp.) in Benin,West Africa

Assessment of diversity and understanding factors underlying species distribution are fundamental themes in ecology. However, the diversity of native arbuscular mycorrhizal fungi (AMF) species in African tropical agro-ecosystems remains weakly known. This research was carried out to assess the morphological diversity of indigenous AMF species associated with rhizosphere of cowpea (Vigna unguiculata (L.) Walp.) in different agro-ecological zones (AEZ) of Benin and to examine the effects of soil chemical properties, climatic factors and agricultural practices on this diversity. Results showed that, in Benin, cowpea was grown by farmers in very exhausted soils, where available phosphorus and potassium were deficient. The indigenous AMF spore density was on average 202 spores per 100 g dry soil and there was no difference in the density among the agro-ecological zones (P = 0.56). Fifteen AMF morphospecies belonging to eight genera (Gigaspora, Scutellospora, Racocetra, Acaulospora, Funneliformis, Rhizophagus, Glomus and Claroideoglomus) were detected. The computed species richness estimators indicated that a limited number of additional undetected morphospecies are probably present in cowpea fields. According to analysis of similarity (ANOSIM), the arbuscular mycorrhizas community composition of the Sudanian zone and Guinean zone were not significantly different (r = −0.01; P = 0.517). The diversity of AMF morphospecies in the fields was weak with prevalence of Glomeraceae (92%). Furthermore, AMF diversity and evenness indices were negatively correlated with annual rainfall (P < 0.01) and with available phosphorus (P < 0.05). However, no significant correlation was observed between AMF diversity indices and soil organic carbon. Ultimately, this study tends to confirm that soil management practices (tillage, soil disturbance) have negative effect on AMF diversity.     

Catabolic response and phospholipid fatty acid profiles as microbial tools to assess soil functioning

Microbial properties may help to provide an integrated view of changes in soil functioning associated with soil management or soil status. The fatty acid profiles of membrane phospholipids (PLFA) can give the composition of ecophysiological groups of soil microbial communities, while catabolic response profiles (CRP) estimate the heterotrophic functional diversity in soils, both relevant to the understanding of the role of micro‐organisms in the functioning of the soil. The objectives of this study were (i) to evaluate the CRP and PLFA as microbial tools to characterize changes in soil functioning and (ii) clarify the relation among these microbial measurements, with other physical, chemical and biochemical soil properties. We compare the same soil subjected to different managements and degrees of erosion. An undisturbed soil (UN), an old pasture soil (OP) and soils under continuous cultivation (NT) with four different depth of A horizon: 25 cm (NT 25), 23 cm (NT 23), 19 cm (NT 19) and 14 cm (NT 14) were tested. Substrate‐induced respiration of most substrates diminished when cropping pressure increased (UN > OP > NT), and soil catabolic evenness, as a diversity index, decreased by increasing production pressure and soil erosion. The correlation found among most of the measured physical, chemical and biochemical soil properties with the catabolic evenness showed the potential of this measurement to provide an integrated view of soil functioning. The PLFA analysis showed that the composition of microbial community denoting a partial recovery after 10 yr under grazed grassland. The stress indicators showed that farming practices increased microbial stress with the highest values found in the most eroded soils.     

Estimating Net Primary Productivity and Carbon Inputs by Soybean Crops in Argentina

Monitoring crop net primary productivity (NPP) and its proportion returned to soil in the form of carbon (C) input is vital to better understand the ecological responses to environmental and anthropogenic changes. However, quantification of NPP and C inputs from cropping systems at a regional scale is challenging due to the temporal and spatial variability of soils, climate, and management practices. The aim of this study was to estimate (i) the NPP from soybean crop [Glycine max (L.) Merr.] and (ii) the C inputs from soybean residues into soils of the Pampas and Extra-Pampas regions of Argentina between 1993 and 2005 using a simple approach based on the crop yield census records, a C budget equation, and crop-specific conversion factors at regional scale. Soybean NPP (t ha^?1 year^?1) at a regional scale was estimated by grain yields and harvested areas reported in the long-term (1993–2005) National database for several districts within each province. The mean annual soybean NPP in the Pampas was 0.3 t ha^?1 higher (P < 0.05) than in the Extra-Pampas, resulting in a higher C input from soybean residues of 0.4 t ha^?1 year^?1 in the Pampas region. Due to improved cultivars and higher nutrient inputs in the Pampas region, the mean NPP and C inputs increased by about 25% from 1999 to 2005. Crop NPP and C inputs from residues into soils play a major role in C dynamics and should be considered for further studies at different scales to understand soil organic C modifications through agricultural changes.     

Soil quality indicators under continuous cropping systems in the Argentinean Pampas

Over the last two decades, soil cultivation practices in the southern Argentinean Pampas have been changing from a 7 year cash-crop production system alternated with 2–3 years under pasture, to a continuous cropping system. A better understanding of the impact of the period of time a field has been under continuous cropping on a broad spectrum of soil properties related to soil quality is needed to target for sustainable cropping systems. The objectives of this study were to: (i) assess the relationship between physical and chemical soil parameters related to soil quality and (ii) identify soil quality indicators sensitive to soil changes under continuous cropping systems in the Argentinean Pampas.

Correlation analysis of the 29 soil attributes representing soil physical and chemical properties (independent variables) and years of continuous cropping (dependent variable) resulted in a significant correlation (p < 0.05) in 78 of the 420 soil attribute pairs. We detected a clear relationship between hydraulic conductivity at tension h (K_h) and structural porosity (ρ_e); ρ_e being a simple tool for monitoring soil hydraulic conditions.

Soil tillage practice (till or no-till) affected most of the soil parameters measured in our study. It was not possible to find only one indicator related to the years under continuous cropping regardless of the cultivation practice. We observed a significant relationship between years under continuous cropping and K_h under no-till (NT) and wheat fallow (p < 0.001, R² = 0.70). Under these conditions, K₋₄₀ diminished as the number of years under continuous cropping increased.

The change in mean weight diameter (CMWD) was the only physical parameter related to the number of years under continuous cropping, explaining 36% of the variability in the number of years under continuous cropping (p < 0.001) The combination of three soil quality indicators (CMWD, partial R² = 0.38; slope of the soil water retention curve at its inflexion point (S), partial R² = 0.14 and cation exchange capacity (CEC), partial R² = 0.13) was able to explain, in part, the years under continuous cropping (R² = 0.65; p value > 0.001), a measure related to soil quality.     

Arbuscular mycorrhizal associations in sesame under low-input cropping systems

The abundance and composition of arbuscular mycorrhizal fungi (AMF) are generally low under managed agroecosystems in comparison to natural ecosystems. The objective of the study was to determine the composition and species richness of AMF associated with sesame under traditional low-input cropping system in Kerala, India. Wide variability in root colonization by AMF as well as spore density in the rhizosphere existed in sesame. Correlation between frequency of colonization (F%) and spore density as well as between these variables and soil characteristics showed a negative relationship. The fungal variables were influenced by soil factors such as pH, soil organic carbon (OC) and available nutrients. Frequency of colonization was positively correlated (P < 0.01) with soil pH and potassium (K) and negatively correlated with OC, nitrogen (N) and phosphorus (P). AM spore density was positively correlated with OC, N and P and negatively correlated with pH and K. Ten taxa of AMF belonging to the genera Acaulospora, Diversispora, Funneliformis, Gigaspora, Glomus and Scutellospora were associated with sesame, with the predominance of Funneliformis and Acaulospora in both frequency and relative abundance over a wider soil nutrient range. Soil characteristics appear to have a profound influence on the composition and species richness of AMF under traditional low-input cropping systems.     

藏北高寒草原土壤活性有机碳对AM真菌物种多样性的影响

基于孢子形态学鉴定,通过研究土壤活性有机碳（ASOC）质量分数对丛枝菌根真菌（AMF）物种多样性及侵染效应的影响,为基于土壤环境调控的菌根生物技术的应用探寻新的途径和方法。结果表明,ASOC质量分数在0.30～0.80、0.81～1.40、1.41～4.00 g/kg范围内,Glomus属真菌对AMF的种群构成均具重要作用,且其影响随ASOC质量分数的增加而提高;由Glomus属真菌构成的优势种,特别是一些共有优势种对AMF的种群发育具有主导作用;ASOC质量分数与孢子密度呈显著正相关,较低的ASOC质量分数极显著促进了菌根侵染。从综合影响看,调控ASOC质量分数至较低（0.81～1.40 g/kg）水平,可能充分发挥AMF在高寒草原中的重要作用,这为探寻适度的农业工程调控措施,以强化ASOC对AMF物种多样性及菌根侵染的重要影响,促进多菌种以及多优势种的协同作用,稳定高寒草原环境提供了重要信息。     

ARBUSCULAR MYCORRHIZAL FUNGI IN REVEGETATED MINED DUNES

This study aimed to thoroughly investigate communities of arbuscular mycorrhizal fungi (AMF) in six coastal, mined, reconstituted and revegetated dune areas in Northeast Brazil. AMF spore density and species richness as well as the numbers of infective AMF propagules and glomalin‐related soil protein (GRSP) were analyzed. Four areas had been restored for 16, 12, 8 and 4 years, and after being mined, reconstituted and re‐vegetated, the fifth was mined and reconstituted but not yet re‐vegetated, and the sixth had a native and undisturbed coastal forest vegetation. The soil samples were sampled in the dry and wet seasons of 2005. The number of infective propagules was significantly higher in the dry than in wet season, except in the un‐vegetated dune area, which had less than 0·2 propagules cm⁻³ soil. AMF spore density and especially GRSP contents changed little between the seasons. GRSP contents were positively correlated to Al and Fe soil levels and were highest in the restinga forest. In total, 29 AMF species were identified, and glomoid and gigasporoid species predominated in all areas. AMF species richness and viable propagules of AMF were lowest in the un‐vegetated dune area. Remarkably, higher species richness (28) was found in the re‐vegetated areas, compared with the forest area that had only 10 species. The numbers of infective propagules tended to be also lower in the forest than in the re‐vegetated sites. In conclusion, re‐vegetation appears to favour the AMF communities in terms of infective propagule numbers and AMF species richness. Copyright © 2011 John Wiley & Sons, Ltd.     

土层深度和季节变化对保护地西瓜连作土壤中丛枝菌根真菌群落结构的影响

The characteristics of arbuscular mycorrhizal fungal (AMF) community structure in various soil depths and growing seasons of watermelon (Citrullus vulgaris) grown in commercial greenhouses in Daxing of Beijing and Weifang and Laiyang of Shandong, China were investigated using both morphological identification and denaturing gradient gel electrophoresis. The sampled soils had been used for continuous greenhouse production of watermelon for 0, 5, 10, 15, or 20 years. Glomus claroideum was the dominant species in the greenhouse soils planted for 5, 10, and 15 years in Laiyang, while Glomus mosseae and Glomus etunicatum were dominant in the nearby open farmland soil. Sorenson’s similarity index of AMF community composition ranged from 0.67 to 0.84 in the soils planted for 5 years, and from 0.29 to 0.33 for 20 years among the three locations. Spore abundance, species richness, and the Shannon index were highest near the soil surface (0-10 cm) and decreased with soil depth, and higher in June and October than in August and December. Canonical correspondence analysis showed that available P and the number of years that soil had been used for greenhouse production were the main factors contributing to the variance of AMF community composition. It was concluded that the community structure of AMF was mainly influenced by soil available P and planting time of watermelon as well as by soil depth and seasonal variation in the commercial greenhouse.     

Effects of Inoculation with Glomus mosseae in Conventionally Tilled and Nontilled Soils with Different Levels of Nitrogen Fertilization on Wheat Growth,Arbuscular Mycorrhizal Colonization,and Nitrogen Nutrition

Evaluation of the performance of inoculants in undisturbed and unsterilized soils, where diverse communities of microorganisms are present, is a necessary step before using arbuscular mycorrhizal fungi (AMF) in agricultural technology. The effects of inoculation with Glomus mosseae on arbuscular mycorrhizal colonization, growth, and nitrogen (N) uptake of wheat plants in unsterilized tilled and untilled soils from the Argentinean Pampas with different levels of N fertilization were assessed. The fertilization and inoculation effects depended on the tillage treatments. In no-tillage, the colonization was greater than in conventional tillage, but it was reduced by the N fertilization. In conventional tillage, the inoculation with G. mosseae increased colonization. Both conventional tillage and N fertilization promoted wheat root growth. Inoculation did not affect root growth but enhanced N concentration in roots when fertilizer was not applied.     

Arbuscular mycorrhizal fungi of Ammophila arenaria (L.) Link: Spore abundance and root colonisation in six locations of the European coast

Arbuscular mycorrhizal fungi (AMF) are common organisms in the rhizhosphere of plants in coastal sand dunes where they play a key role in the establishment, growth and survival of plants. This study presents a quantitative analysis of the AMF associated with Ammophila arenaria, the most important sand-fixing species in the foredunes of Europe, in six locations along the western European coast. Spore abundance and root colonisation by AMF were estimated in July 2003, October 2003 and April 2004. The number of spores varied significantly with time and location. A clear peak of sporulation in autumn was found for three of the northern sites, but no pattern was detected in the southern sites. Root colonisation showed no seasonal pattern, despite differences between sampling times. Both hyphal coils and arbuscules were observed inside the roots, indicating colonisation by more than one AMF species. No correlation was found between root colonisation and spore number, or between AMF abundance and soil fertility. We conclude that: (a) spore production is driven by climatic conditions in the studied northern sites and by plant phenology in the studied southern sites; and that (b) root colonisation is independent of climate, phenology and soil fertility in the studied locations.     

Effect of tillage and crop on arbuscular mycorrhiza colonization of winter wheat and triticale under Mediterranean conditions

Large‐scale inoculation with arbuscular mycorrhizal fungi (AMF) is generally impractical in most regions and we have little understanding of the factors that determine inoculation success. Nevertheless, the ability to take full advantage of indigenous AMF for sustainable production needs to be developed within cropping systems. We used part of a long‐term field experiment to understand the influence of tillage and the preceding crop on AMF colonization over the growing season. Arbuscular mycorrhiza colonization rate was more affected by treatment (tillage or the combination of crop and preceding crop) than by the total number of AMF spores in the soil. Conventional tillage (CT) had a statistically significant negative effect (P ≤ 0.05) on spore numbers isolated from the soil, but only in the first year of study. However, the AMF colonization rate was significantly reduced by CT, and the roots of wheat, Triticum aestivum, L, cv. Coa after sunflower, Helianthus annuus L., were less well colonized than were those of triticale, X Triticosecale Wittmack, cv. Alter after wheat, but the affect of tillage was more pronounced than was the effect of crop combination. Under no‐till there was a significant increase in AMF colonization rate throughout the sampling period in both wheat and triticale, indicating that the extraradical mycelium previously produced acted as a source of inoculum. In general, triticale showed greater AMF colonization than wheat, despite the preceding crop being less mycotrophic. Under these experimental conditions, typical of Mediterranean agricultural systems, AMF colonization responded more strongly to tillage practices than to the combination of crop and preceding crop.     

Glyphosate Dissipation in Different Soils Under No-Till and Conventional Tillage

Glyphosate is the most used herbicide in Argentina, accounting for 62% of the commercialized pesticides on the market. It is used as a weed controller in no-till systems, and it is also applied to various genetically modified crops (e.g., soybean, corn, and cotton). Although it has a high solubility in water, it tends to adsorb and accumulate in agricultural soils. The main objectives of this work were to compare the dissipation of glyphosate and the accumulation of its metabolite aminomethylphosphonic acid (AMPA) over time in three soils from agricultural areas of Argentina under long-term management with no-till (NT) and conventional tillage (CT) practices. There were no differences in dissipation between NT and CT, indicating that the glyphosate-degrading microflora was not modified by the different tillage managements. Moreover, tillage practices did not alter the general soil properties; therefore, glyphosate bioavailability was not affected by NT or CT practice. Forty percent of the applied glyphosate was degraded within the first three days in all soils, indicating a fast initial dissipation rate. However, the dissipation rate considerably decreased over time, and the degradation kinetics followed a bi-exponential (or two-compartment) kinetic model. No differences were found between tillage practices. Dissipation was not related to the microbial activity measured as soil respiration. The fast decrease in the concentration of glyphosate at the beginning of the dissipation study was not reflected in an increase in the concentration of AMPA. The estimated half-lives for glyphosate ranged between 9 and 38 d. However, glyphosate bioavailability decreases over time, as it is strongly adsorbed to the soil matrix. This increases its residence time, which may lead to its accumulation in agricultural soils.     

Arbuscular mycorrhizal fungi in the Brazilian Atlantic forest: A gradient of environmental restoration

Arbuscular mycorrhizal fungi (AMF) are of great importance for the successful regeneration of degraded natural areas. The objective of this study was to examine how the time of environmental recuperation is affecting the occurrence and diversity of AMF species in riparian areas belonging to the Atlantic Forest biome in the State of São Paulo, Brazil. The study involved a native forest area (NT) and a gradient of environmental restoration: five (R05), ten (R10), and twenty (R20) years after reforestation. Soil samples were collected in the rainy (January) and dry season (June). Chemical, physical and microbiological analyses were performed including the amount of glomalin and quantification of AMF spores. The frequency of occurrence of genera and ecological indices, as richness (R), Shannon's diversity (H) and Simpson's dominance index (Is) were calculated. The largest spore number was found in R05 and the highest richness and diversity indices of AMF species in NT. Considering the two sampling periods and the four areas studied, we found 22 AMF species, and the genera Glomus and Acaulospora were the most frequent. A Canonical Discriminant Analysis showed that Glomus viscosum, Acaulospora scrobiculata, Acaulospora mellea and Scutellospora heterogama were the species that contributed the most to distinguishing the areas. Moisture, density and glomalin were positively correlated with the number of spores, however, soil nitrate showed a negative correlation. This work gives a better understanding of the interactions between AMF and forest soils and allows to know the distribution of AMF species according to environmental recovery time.     

Distribution of arbuscular mycorrhizal fungi spores in soils of smallholder agroforestry and monocultural coffee systems in southwestern Ethiopia

Arbuscular mycorrhizal fungi (AMF) are associated with the root system of coffee (Coffea arabica L.) plants, but their distribution in smallholder agroforestry and monocultural coffee systems is not well known. This study investigates the spatial distribution of AMF spores in a field study in southwestern Ethiopia. Soil samples from different depths (0–50 cm) were collected under the tree canopies of Acacia abyssinica, Albizia gummifera, Ficus sur, Ficus vasta and randomly selected unshaded coffee plants at different sampling points (canopy base, radius, edge and outside canopy). Significantly higher AMF spore densities were recorded at canopy bases and at 0–30 cm soil depth. Spore populations were found to belong to five genera: Acaulospora, Entrophospora, Glomus, Gigaspora and Scutellospora, with Glomus and Acaulospora dominating. Sampling points, sites and depths, shade tree species and shade tree/coffee plant age affected AMF spore density. Agroforestry practices including the use of leguminous shade trees effectively maintained AMF numbers in soils even at depth compared with unshaded coffee plants (monocultures).     

Arbuscular mycorrhizal fungi and soil aggregation in a no‐tillage system with crop rotation

Crop rotation adoption in no‐tillage systems (NTS) has been recommended to increase the biological activity and soil aggregation, suppress soil and plant pathogens, and increase the productivity aiming at the sustainability of agricultural areas. In this context, this study aimed to assess the effect of crop rotation on the arbuscular mycorrhizal fungi (AMF) community and soil aggregation in a soil cultivated for nine years under NTS. Treatments consisted of combinations of three summer crop sequences and seven winter crops. Summer crop sequences consisted of corn (Zea mays L.) monoculture, soybean (Glycine max L. Merrill) monoculture, and soybean–corn rotation. Winter crops consisted of corn, sorghum (Sorghum bicolor (L.) Moench), sunflower (Helianthus annuus L.), sunn hemp (Crotalaria juncea L.), pigeon pea (Cajanus cajan (L.) Millsp.), oilseed radish (Raphanus sativus L.), and millet (Pennisetum americanum (L.) Leeke). Soil samples were collected at a depth of 0–0.10 m for analyses of soil chemical, physical, and biological attributes. Spore abundance, total glomalin, and soil aggregate stability index were higher in the soil under corn monoculture. The highest values of aggregate mean weight diameter were observed in the soybean–corn rotation (3.78 mm) and corn monoculture (3.70 mm), both differing from soybean monoculture (3.15 mm), while winter crops showed significant differences only between sorghum (3.96 mm) and pigeon pea (3.25 mm). Two processes were identified in the soil under summer crop sequences. The first process was observed in PC1 (spore abundance, total glomalin, easily extractable glomalin, pH, P, and Mg²⁺) and was related to AMF; the second process occurred in PC2 (aggregate mean weight diameter, soil aggregate stability index, K⁺, and organic matter) and was related to soil aggregation. The nine‐year no‐tillage system under the same crop rotation adoption influenced AMF abundance in the soil, especially with corn cultivation in the summer crop sequence, which promoted an increased total external mycelium length and number of spores of AMF. In addition, it favored an increased soil organic matter content, which is directly related to the formation and stability of soil aggregates in these managements.     

Changes of arbuscular mycorrhizal traits and community structure with respect to soil salinity in a coastal reclamation land

A comprehensive knowledge on the relationship between soil salinity and arbuscular mycorrhizal fungi (AMF) is vital for a deeper understanding of ecosystem functioning under salt stress conditions. The objective of this study was to determine the effects of soil salinity on AMF root colonization, spore count, glomalin related soil protein (GRSP) and community structure in Saemangeum reclaimed land, South Korea. Soil samples were collected and grouped into five distinct salt classes based on the electrical conductivity of soil saturation extracts (EC_se). Mycorrhizal root colonization, spore count and GRSP were measured under different salinity levels. AMF community structure was studied through three complementary methods; spore morphology, terminal restriction fragment length polymorphism (T-RFLP) and denaturing gradient gel electrophoresis (DGGE). Results revealed that root colonization (P < 0.01), spore count (P < 0.01) and GRSP (P < 0.01) were affected negatively by soil salinity. Spore morphology and T-RFLP data showed predominance of AMF genus Glomus in Saemangeum reclaimed land. T-RFLP and DGGE analysis revealed significant changes in diversity indices between non (EC_se < 2 dS/m) and extremely (EC_se > 16 dS/m) saline soil and confirmed dominance of Glomus caledonium only in soils with EC_se < 8 dS/m. However, ribotypes of Glomus mosseae and Glomus proliferum were ubiquitous in all salt classes. Combining spore morphology, T-RFLP and DGGE analysis, we could show a pronounced effect in AMF community across salt classes. The result of this study improve our understanding on AMF activity and dominant species present in different salt classes and will substantially expand our knowledge on AMF diversity in reclaimed lands.     

Impact of conservation tillage and organic farming on the diversity of arbuscular mycorrhizal fungi

Communities of arbuscular mycorrhizal fungi (AMF) are strongly affected by land use intensity and soil type. The impact of tillage practices on AMF communities is still poorly understood, especially in organic farming systems. Our objective was to investigate the impact of soil cultivation on AMF communities in organically managed clay soils of a long-term field experiment located in the Sissle valley (Frick, Switzerland) where two different tillage (reduced and conventional mouldboard plough tillage) and two different types of fertilization (farmyard manure & slurry, or slurry only) have been applied since 2002. In addition, a permanent grassland and two conventionally managed croplands situated in the neighborhood of the experiment were analyzed as controls. Four different soil depths were studied including top-soils (0–10 and 10–20 cm) of different cultivation regimes and undisturbed sub-soils (20–30 and 30–40 cm). The fungi were directly isolated from field soil samples, and additionally spores were periodically collected from long-term trap culture (microcosm) systems. In total, >50,000 AMF spores were identified on the species level, and 53 AMF species were found, with 38 species in the permanent grassland, 33 each in the two reduced till organic farming systems, 28–33 in the regularly plowed organic farming systems, and 28–33 in the non-organic conventional farming systems. AMF spore density and species richness increased in the top-soils under reduced tillage as compared to the ploughed plots. In 10–20 cm also the Shannon–Weaver AMF diversity index was higher under reduced tillage than in the ploughed plots. Our study demonstrates that AMF communities in clay soils were affected by land use type, farming system, tillage as well as fertilization strategy and varying with soil depth. Several AMF indicator species especially for different land use types and tillage strategies were identified from the large data set.     

Mycorrhizal activity and diversity in a long-term organic Mediterranean agroecosystem

In organic agriculture, soil fertility and productivity rely on biological processes carried out by soil microbes, which represent the key elements of agroecosystem functioning. Arbuscular mycorrhizal fungi (AMF), fundamental microorganisms for soil fertility, plant nutrition and health, may play an important role in organic agriculture by compensating for the reduced use of fertilizers and pesticides. Though, AMF activity and diversity following conversion from conventional to organic farming are poorly investigated. Here we studied AMF abundance, diversity and activity in short- and long-term organically and conventionally managed Mediterranean arable agroecosystems. Our results show that both AMF population activity, as assessed by the mycorrhizal inoculum potential (MIP) assay, the percentage of colonized root length of the field crop (maize) and glomalin-related soil protein (GRSP) content were higher in organically managed fields and increased with time since transition to organic farming. Here, we showed an increase of GRSP content in arable organic systems and a strong correlation with soil MIP values. The analysis of AMF spores showed differences among communities of the three microagroecosystems in terms of species richness and composition as suggested by a multivariate analysis. All our data indicate that AMF respond positively to the transition to organic farming by a progressive enhancement of their activity that seems independent from the species richness of the AMF communities. Our study contributes to the understanding of the effects of agricultural managements on AMF, which represent a promising tool for the implementation of sustainable agriculture.