Estimating genetic effects in maternal and paternal half-sibs from tetraploid-diploid crosses in <Emphasis Type="Italic">Musa</Emphasis> spp.

Ploidy manipulations and interspecific crosses have allowed considerable genetic progress in Musa breeding, but estimation of genetic parameters for parental selection remains a major challenge. This study aimed to determine the components of genetic variance and the relative contribution of genetic effects to phenotypic variation of yield and phenological traits in secondary triploid hybrids from tetraploid–diploid crosses. The hybrids were evaluated in two consecutive growth cycles on a tropical forest site. Non-genetic effects accounted for a large fraction of the variation observed for most traits, except bunch weight. Partitioning of genetic variance into additive and dominance components confirmed the predominant role of additive genetic effects on the expression of bunch weight, fruit filling time, fruit length, plant height, and number of leaves while primarily non-additive effects accounted for suckering behavior and fruit circumference. Maternal general combining ability (GCA) effects accounted for the additive genetic variation in plant height and number of leaves, suggesting that selection for these traits should be carried out in tetraploid clones. Conversely, paternal GCA effects were the primary causes of genetic variation for fruit filling time, bunch weight, and fruit length, suggesting that these characters should be selected for in diploid clones. Specific combining ability (SCA) effects were observed for all traits, except fruit filling time, suggesting that additional genetic gain could be achieved through recombinative heterosis for these traits.     

Combining ability,heterosis, genetic distance and their intercorrelations for waterlogging tolerance traits in chrysanthemum

Waterlogging tolerance (WT) is a major objective in chrysanthemum breeding programs, and although certain genotypes with different tolerance levels have been identified, their value as parents for WT breeding is unknown. Here, twelve F₁ crosses derived from an incomplete diallel mating scheme were conducted to investigate combining ability and heterosis for WT and their relationships with parental genetic distance. The results showed that the membership function value of waterlogging (MFVW) was controlled by additive and non-additive gene effects, whereas other growth and biomass traits were mainly controlled by non-additive gene effects. The estimated broad and narrow sense heritabilities of the MFVW were 97.5 and 51.5%, respectively. Combining ability analyses indicated that ‘Nannong Xuefeng’ showing the largest general combining ability (GCA) effect for the MFVW was the best combiner, and identified several best cross combinations with high positive specific combining ability (SCA) effects for most WT-related traits. Mid- and high-parent heterosis occurred widely. The three distance measures, based on phenotypic traits (PD), molecular markers (GD) and markers linked with quantitative trait loci (QTL-GD), presented a non-significant correlation with combining ability except for the GD with GCA for the relative root fresh weight. The correlations between the QTL-GD and heterosis were significant for certain traits and generally higher than that of the PD or GD and heterosis. The SCA effects were positively correlated with heterosis for most of the WT traits (0.51 ≤ r ≤ 0.80). The findings benefit understanding the inheritance mode and then achieving desirable improvement for WT in chrysanthemum.     

Combining ability for yield,protein and oil of peanut lines from South American centers of diversity

Summary Ten peanut (Arachis hypogaea L.) lines, two from each of five centers of diversity in South America, and the F₂ generation of all possible crosses among them were used to characterize the variation for yield, fruit and seed traits and protein and oil content and to determine the breeding potential of the parents. Two of the parental lines belong to subspecies hypogaea and the other eight to subspecies fastigiata.Several crosses gave heterotic responses for yield. The parents of the crosses with significant heterosis generally came from different centers of diversity.Variation among both general and specific combining abilities was significant for all traits with the exception of the SCA estimate for protein percent. The component of variation for GCA was larger than the SCA component for all traits.A Spanish line and a Valencia-like intermediate line from the Guarani region had the highest GCA effects for fruit yield, seed yield and meat content and transmitted consistently their characteristics to their F₂ progeny. Some lines showed significant but small maternal effects for oil, protein and oil + protein percent. Differences between reciprocal crosses were significant for fruit length, fruit weight and oil + protein percent.A significant portion of the variation among crosses was explained by differences among parental lines within centers of diversity. This supports the fact that centers are founded because of the diversity of the peanuts grown there.The performance of parental lines per se was useful in predicting the performance of the lines in hybrid combination for all traits except fruit yield.Paper number 6141 of the Journal Series of the North Carolina Agricultural Research Service (USA). This work was partially supported by CSRS Research Agreement 701-15-51.     

Estimating gene action,combining ability and heterosis for grain yield and agronomic traits in extra-early maturing yellow maize single-crosses under three agro-ecologies of Ghana

Maize (Zea mays L.) is the most important cereal crop produced in Ghana. However, yield of the crop is generally low, producing just about 1.7 t/ha. The low yield is attributed to continuous use of local/unimproved varieties. Generally, hybrid varieties have proven to out-yield the local/unimproved varieties due to improved vigour. Development of hybrid varieties depend on good understanding of combining ability and inheritance of important quantitative traits such as grain yield (GY). 45 half-diallel crosses generated from 10 extra-early maturing yellow inbred lines were evaluated in 2015 under rain-fed conditions. The objectives were to determine the genetic control, breeding value and estimate heritability for GY and agronomic traits of the inbred lines under contrasting growing environments in Ghana. General combining ability (GCA) and specific combining ability (SCA) were important in the inheritance of GY and agronomic traits of the inbred lines. However, GCA was more important than SCA across environments to suggest that additive gene action was more important than non-additive gene action in the inheritance of GY and agronomic traits in the inbred lines. High broad-sense heritability, for GY and other agronomic traits indicated preponderance of additive gene action in trait expression, thus, selection based on phenotypic expression could be feasible. Inbred lines P1, P4 and P8 were good combiners for high GY. The genotype, P4 × P8, was identified as the ideal and most yielding single-cross hybrid across research environments and should be further tested on-farm before commercialization.     

籼型杂交水稻农艺性状的配合力研究

如何有效利用杂种优势已成为水稻增产的关键。本研究按照NCII遗传交配设计,将三系野败型杂交水稻的恢复系和微核心种质构成的115份优异籼稻品种,分别与4个两系不育系及1个三系不育系测交,分析各农艺性状配合力、遗传力及相互关系。结果表明,除单株有效穗数、主穗实粒数外,其他农艺性状一般配合力差异均达到极显著水平;除单株有效穗数外,其他各农艺性状特殊配合力差异也均达到极显著水平。同一组合的不同性状、同一亲本的不同组合所表现出的特殊配合力效应都有所不同,表明亲本的一般配合力水平与特殊配合力间没有固定的联系。在育种实践中,选取一般配合力高的亲本,同时兼具较高特殊配合力是获取高产杂交稻组合的关键。     

A diallel study of yield components and fruit quality in chilli pepper (<Emphasis Type="Italic">Capsicum baccatum</Emphasis>)

The aim of this work was to estimate the general and specific combining ability of peppers by measuring fruit quality and yield traits. This experiment was carried out on the garden field from Universidade Federal de Viçosa (UFV), Minas Gerais State—Brazil. Eight lines of Capsicum baccatum belonging to the UFV Horticultural Germplasm Bank were chosen based on their broad genetic and phenotypical background variation and then they were crossed in a complete diallel way. The F₁ seeds of the 56 hybrids and eight parents were planted in the field in a randomized complete block design. The data were submitted to ANOVA and the means were grouped by Scott–Knott test (P ≤ 0.01). Significant variation for fruit quality and yield components was observed among parents and F₁ generation. Analysis of variance for the combining ability showed that GCA effects exhibited significant difference and SCA effects of the crosses were significant, except for the height of first bifurcation. For almost all characters both additive and non-additive effects influenced the performance of hybrids.     

Combining ability for seed yield traits of Chenopodium quinoa breeding lines

For a better understanding of the inheritance of seed yield traits in Quinoa (Chenopodium quinoa) Willd., a half-diallelic crossing experiment with six diverse but uniform breeding lines was conducted. True hybrid plants were detected by means of differences in panicle colour in 14 out of the 15 crosses performed. The agronomic performance of 14 F₂ populations and six parental lines was evaluated in field trials on fertile clay soil. General and specific combining ability of the lines (GCA and SCA) were estimated. Highly significant differences in GCA effects were found between the lines for plant height at maturity, early flowering, early maturity, seed yield and thousand seed weight. Significant SCA effects were only found for plant height at maturity. However, SCA effects were rather small and accounted for 7% of the total variance. The finding of large GCA effects and low SCA effects suggests that best selection results could be expected from crosses between the agronomic best performing genotypes. This revised version was published online in August 2006 with corrections to the Cover Date.     

Ga糯玉米自交系的配合力分析与评价

摘要：利用不完全双列杂交NCⅡ设计,以3个经遗传改良的Ga糯玉米自交系为父本,与8个糯玉米自交系进行杂交。对24个杂交组合进行农艺性状鉴定,分析Ga糯玉米自交系主要农艺性状的配合力效应。结果表明,父、母本各性状的一般配合力和特殊配合力效应均达极显著差异。Ga糯玉米自交系具有良好的配合力,其中,CM327的一般配合力效应比较高,其组配的杂交种在产量、穗长、行粒数等性状上具有明显优势,具有很好的杂优利用潜力。Ga糯玉米自交系的选育利用,有助于糯玉米种质的扩增与杂种优势的利用。     

春玉米主要穗部性状配合力及遗传参数分析

选育具有高配合力的优良自交系是育种工作的基础,为更好的了解北方早熟春玉米区玉米(Zea mays L.)自交系的配合力表现和性状遗传规律,为杂交种组配和种质改良提供亲本和育种策略,选用在生产及种质改良中常用的12个玉米自交系,按双列杂交模式设计组配杂交组合, 以完全随机区组设计进行试验,对主要穗部性状进行鉴定,按照改良griffingⅣ 双列杂交分析方法对数据进行处理。试验表明一般配合力和特殊配合力效应在亲本间存在显著差异。穗粗、容重、籽粒行数等性状遗传力较高,主要受加性效应控制。而产量、穗重主要受非加性基因控制,易受环境因素影响。K12、丹340和黑选169对提高产量的效应明显,P138在提高后代容重方面优势显著,含有地方种质的早熟材料龙抗118、大粒黄可以显著提高后代穗部长度。     

Analysis of diallel cross for some physical-quality traits in peanut (Arachis hypogaea L.)

The combining abilities for physical-quality traits in peanut were examined to understand the type of gene action governing these traits, and to identify peanut genotypes suitable for use as parents in breeding for quality improvement. The F₁ hybrids including reciprocals from a six-parent diallel cross along with the parents were evaluated in a randomised complete block design. Data were recorded on five quality traits in peanut viz., shelling outturn, 100-pod weight, 100-seed weight, Count and proportion of sound mature seeds. Substantial genetic variability was observed among the hybrids for the traits studied. Diallel analysis indicated that expression of majority of the quality traits is regulated predominantly by additive gene action suggesting possibility of early-generation selection, while non-additive gene action also plays an equally important role in the control of seed size. Significant reciprocal effect for all the traits denoted role of maternal parent in the expression of quality traits and importance of parental selection in quality breeding. Genotypes ICGV 86564 and TPG 41 were good combiners for seed size, while J 11 was a good combiner for improvement of shelling outturn and proportion of mature seeds. Association between general combining ability (GCA) effects and mean performance suggested that the performance per se of the genotype should be a good indicator of its ability to transmit the desirable quality attributes to its progenies. Though performance of crosses was found to be independent of parental GCA status, it is evident that at least one of the parents used in hybridisation should have large pods and seeds for obtaining better segregants.     

Bread wheat: F1 hybrid performance and parental diversity estimates using molecular markers

In wheat, the possibility of introducing F₁ seed into practical agriculture has been greatly enhanced by the discovery of effective chemical hybridising agents (CHAs). Although some technical and economic problems concerning the use of CHAs for large-scale production of F₁ seed remain to be solved, a first group of F₁ hybrids has been submitted for registration in several European countries i.e., France, England and Italy. Combining ability for grain yield and several agronomic and quality traits was studied in an eight-parent diallel cross. Highly significant combining ability effects were observed for all the traits while specific combining ability effects were statistically significant for grain yield, plant height, heading time and Chopin alveograph parameter P. The level of genetic diversity between parents as estimated using molecular markers is considered a tool for predicting the hybrid performance and heterosis of crosses. To explore this possibility, RFLP and RAPD markers were used to predict the performance of hybrids obtained from diallel and top crosses. The performance of the hybrids was determined in replicated plot trials sown at normal seed density in several locations. Coefficient of parentage (rp), based on pedigree information for all the pairwise combinations of the parents ranged from 0.01 to 0.34. The parents were assayed for random amplified polymorphic DNA (RAPD) with 87 primers which generated 304 polymorphic bands. Genetic similarity between parents, estimated on the basis of common bands using the Jaccard's similarity coefficient (J), ranged from 0.25 to 0.57. Correlation between parental diversity and hybrid performance was generally weak. A positive trend is observed in the yield potential of the hybrids produced in Italy in the last 10 years. In fact among the first set of hybrids produced by random crossing of the available cultivars, none produced 10% more than the checks whereas the last generation of hybrids includes combinations yielding 15% more than the best standards. Our results clearly indicate the need to develop specific strategies in order to identify and/or to select parental lines with a high level of general combining ability (GCA) and specific combining ability (SCA). The information regarding the genetic diversity of the parental lines do not appear helpful for predicting F₁ performance. This revised version was published online in August 2006 with corrections to the Cover Date.     

5个抗黄萎病棉花品种的抗性配合力分析

以陆地棉的5个抗黄萎病品种为父本,4个感病品种为母本,采用不完全双列杂交配制20个组合,进行黄萎病抗性配合力研究。结果表明,冀122、中植棉2号在发病率、病情指数、相对病情指数3个性状上均具有较高的一般配合力（GCA）效应,而冀棉616、豫棉112、徐棉18号则为负向效应。通过特殊配合力（SCA）效应分析,有9个组合具有正效应,而11个组合为负效应。通过估算3个性状的GCA方差和SCA方差,表明这些性状主要受加性基因效应控制。通过遗传力分析,3个性状广义遗传力较大,可在早代选择。     

Genomic prediction of sunflower hybrid performance

Predicting single‐cross performance is of high importance to improve the efficiency of sunflower (Helianthus annuus L.) hybrid breeding programmes. We used experimental data from inter‐ and intragroup sunflower hybrids and their parental lines adapted to Central Europe to (i) study the genetic diversity and combining ability and (ii) examine the accuracy to predict hybrid performance based on phenotypic and genomic data. We evaluated 133 intragroup and 104 intergroup hybrids with their parental lines in replicated trials at four environments for grain yield, oil yield and oil content. Furthermore, the parental lines were fingerprinted with 572 AFLP markers. Variance due to specific combining ability was comparable for intergroup and intragroup crosses. This suggested a lack of clearly defined heterotic groups for the sample of studied sunflower lines. Prediction accuracy of hybrid performance based on general combining ability effects was high and could not be increased using genomic selection approaches. For situations where no information on GCA effects of parental lines was available, hybrid prediction based on genomic selection methods was accurate for groups of related lines. For groups of unrelated lines, however, we observed a strong decrease in the prediction accuracy. This suggests that prediction of hybrid performance for crosses based on genetically distant parents remains challenging.     

陆地棉配合力与杂种优势、遗传距离的相关性分析

 用10个陆地棉亲本进行不完全双列杂交,共配置了45个组合,计算亲本的一般配合力（GCA）、特殊配合力(SCA)、杂种优势,并结合SSR标记研究了陆地棉亲本配合力与杂种优势、遗传距离之间的相关关系。配合力分析发现,10个亲本的一般配合力和特殊配合力存在显著或极显著差异。分析亲本配合力、杂种优势和遗传距离的相关性发现,子棉产量、皮棉产量、衣分的一般配合力和杂种优势呈显著或极显著相关,纤维长度、比强度、麦克隆值、株高、果枝数、单株铃数、铃重、子棉产量、皮棉产量、衣分的特殊配合力和杂种优势均呈极显著正相关,而与遗传距离相关均不显著。单株铃数、铃重、子棉产量、皮棉产量、衣分的杂种优势与遗传距离均为正向显著或极显著相关。在育种实践中这些显著或极显著相关的性状可能具有较高的改良潜力。     

QTL遗传效应正反交差异研究

应用改良AD模型对转基因棉花QTL突变体系进行遗传效应的正反交比较分析,结果表明,农艺性状的主要遗传方差组分分解正反交表现一致,除铃重存在显著的遗传背景加性效应(A2)外,子棉产量、皮棉产量、衣分和铃数均存在显著或极显著的 dQTL加性效应(A1)和显性效应(D1),农艺性状均有显著或极显著的遗传背景显性效应(D2);棉花纤维性状的主要遗传效应正反交之间无显著差异.铃重的dQTL的加性和显性效应与环境的互作存在显著差异.对转基因系、受体及三个品系的dQTL加性效应分解结果也表明,正反交对不同材料各性状的加性效应估计也是一致的.本文还对不同组合正反交时的纯合及杂合显性效应进行预测比较.     

Combining ability of common bean (Phaseolus vulgaris) genotypes for root traits across diverse environments

Root system architecture is important for common bean (Phaseolus vulgaris) adaptability to diverse environments. Beans employ complex adaptive root mechanisms for coping with multiple stresses in production environments. Understanding genetic control of root traits is central to improvement of common bean for adaptation to marginal environments. The objectives of this study were to (i) determine combining ability of root and agronomic traits and (ii) estimate the heritability and genetic correlation of root and agronomic traits in common bean. Four bean lines with superior root traits were crossed with four locally adapted varieties in a North Carolina II mating scheme to generate 16 crosses. The 16 F₁s were selfed and advanced to F₂ generation. Eight parents and their F₂ progenies were evaluated in an alpha-Lattice design with two replications. General and specific combing ability mean squares were significant (p ≤ .05) for all traits measured. General predictability ratios ranged from .47 to .68 across locations suggesting that both additive and non-additive gene action modulate root traits and seed yield. Positive and significant (p ≤ .05) phenotypic and genetic correlations revealed significant association between root traits and yield. Moderate to high heritability estimates of between .43 and .67 were realized. Such estimates point to possible deployment of a successful selection programme. Genotype AFR398 displayed significant positive GCA effects among its crosses for both root and agronomic traits hence a potential candidate genotype for inclusion in a bean genetic improvement programme for marginal environments.     

Performance and combining ability in cotton (<Emphasis Type="Italic">Gossypium hirsutum</Emphasis> L.) populations with diverse parents

Improving fiber quality properties of cotton is important for increasing the efficiency of manufacturing textiles, including enhancing yarn quality and spinning performance. This study was conducted to determine if we could identify valuable cotton cultivars to use as parents in breeding programs with the goal of improving fiber properties. Seven parents were combined in a diallel design and selfed to obtain 21 F₂ populations. Positive general and specific combining ability effects were observed for all traits. General combining ability tended to be larger than specific combining ability, indicating these traits are controlled primarily by additive genetic effects. Correlations among traits were generally positive except for lint yield correlations with fiber strength and length. For improving the fiber quality measures of strength and length, line 7235 shows excellent general combining ability effects. SG125 would provide elite germplasm to increase agronomic measures of lint yield and lint percent. The MD51 genotype has the highest potential among the genotypes tested here to provide germplasm combining both improved yield and fiber strength. These parents, or their selected progeny, should be useful in a breeding program to generate variability from which selection can be used to identify lines with improved fiber and/or agronomic properties.     

糯高粱主要农艺性状配合力与杂种优势的关系

以7个不育系和5个恢复系为亲本,采用不完全双列杂交试验设计（NC II）配制35个杂交糯高粱组合,分析了10个主要农艺性状的配合力、杂种优势及其相关关系。结果表明：10个农艺性状的表达以加性基因效应为主,且多数性状同时受加性和非加性基因效应的共同影响。供试组合在多数性状上表现出较强的杂种优势。一般配合力（GCA）和总配合力（TCA）与竞争优势呈极显著相关,且其相关系数较大,说明本研究中可利用一般配合力或总配合力效应预测竞争优势;多数性状的一般配合力效应、特殊配合力效应（SCA）和总配合力效应与中亲优势呈显著或极显著相关,且特殊配合力效应与中亲优势的相关性多高于一般配合力或总配合力效应,但特殊配合力效应与中亲优势的相关系数较小不足以预测中亲优势,说明配合力与中亲优势的关系还有待进一步研究。     

Comparisons of genetic and morphological distance with heterosis between Medicago sativa subsp. sativa and subsp. falcata

Biomass yield heterosis has been shown to exist between Medicago sativasubsp. sativa and Medica gosativa subsp. falcata. The objective of this study was to gain a better understanding of what morphological and genetic factors were most highly correlated with total biomass yield heterosis. We calculated genetic distances among nine sativa and five falcate genotypes based on amplified fragment length polymorphism (AFLP) and simple sequence repeat (SSR) DNA markers. Genetic distance did not correlate with specific combining ability (SCA) or mid-parent heterosis. In contrast, a morphological distance matrix based on seventeen agronomic and forage quality traits was significantly correlated with heterosis; the agronomic traits of maturity, midseason regrowth, and autumn regrowth showed strong association with heterosis. Heterosis was also correlated with subspecies. We suggest that in many cases progeny heterosis can be accounted for by the interaction of genes controlling morphologically divergent traits between the parents. In other cases, progeny heterosis could also be due to divergence between the parents at particular genetic loci that do not control field-level phenotypic differences. Genetic distanceper se between parental genotypes, based on neutral molecular markers, however, does not reflect the potential of individual genotypes to produce heterosis in their progeny. This revised version was published online in August 2006 with corrections to the Cover Date.     

Diallel analysis of barley for resistance to leaf stripe and impact of the disease on genetic variability for yield components

Barley breeders in Syria attempting to develop barley (Hordeum vulgare L.) cultivars resistant to barley leaf stripe (BLS) disease caused by Pyrenophora graminea Ito & Kuribayashi [anamorph Drechslera graminea (Rabenh. Ex. Schlech. Shoem.)]. Information on the combining ability for BLS resistance in Syria is not available. This study was conducted to evaluate, in 10 genetically diverse barley parents, general combining ability (GCA) and specific combining ability (SCA) effects towards the determination of the genetic basis of disease resistance and to estimate genetic variability for yield components and its modification by BLS. Ten parental genotypes varying in their reactions to BLS were crossed in a half-diallel mating design to generate 45 full-sib families. The families and the parents were inoculated with P. graminea and evaluated for resistance in replicated field tests (three inoculated and three non-inoculated plots). The parents chosen showed wide variations for resistance to BLS. Genetic component analysis showed significant effects for both GCA and SCA for resistance to BLS, suggesting that additive as well as non-additive genetic mechanisms were involved in the expression of resistance in these parents. GCA effects were more important than SCA effects. Resistant parents exhibited high negative GCA indicating that additive gene effects were more predominant, and suggesting their prime suitability for use in barley breeding programs to improve resistance to BLS. Narrow-sense heritability was 58% and broad-sense heritability was 99% indicating that selection for BLS resistance should be effective in these crosses. A high genetic variability for the agronomic traits studied was observed. Yield components decreased significantly in inoculated plants and more pronounced in diseased plants. Significant GCA was observed for all traits. Values for GCA were, in some cases, significantly modified by BLS. This indicates that attention must be paid to the danger of drawing conclusion in quantitative genetics studies dealing with both diseased and healthy plants. Two genotypes, Banteng and Igri, had high negative GCA effects and are promising parents for enhancement of BLS resistance.