Variation in sweet corn kernel characteristics associated with stand establishment and eating quality

Summary A better understanding of the relationships between kernel characteristics associated with eating quality and stand establishment could be helpful in selection of superior genotypes by the sweet corn industry. A set of sweet corn (Zea mays L.) inbred lines with different endosperm mutations (su1, su1 se1 and sh2) were evaluated for field emergence and seedling growth rate at two locations over two years. Kernel characteristics associated with eating quality (kernel moisture concentration, kernel tenderness, sugars, phytoglycogen and dimethyl sulfide (DMS) concentrations were determined for the same inbreds by laboratory analysis from ears harvested at 18 and 22 days after pollination (DAP). Amounts of sugars, phytoglycogen and starch were also measured in mature dry kernel samples of the same inbreds. Extensive genetic variability was found among endosperm mutations and among genetic backgrounds within the different endosperm groups for most of the characteristics under study. Most of the kernel attributes associated with eating quality were uncorrelated indicating that selection to improve specific eating quality characteristics can be conducted simultaneously. A negative correlation between field emergence and sugar concentrations in immature kernels suggests that in breeding programs designed to develop germplasm with improved germination and stand establishment, concurrent attention must be given to the fresh quality of the harvested product. This information is of value to breeders and commercial growers for selection of sh2 and su1 se1 lines with superior field emergence and eating quality.Abbreviations (DAP) days after pollination - (DMS) dimethyl sulfide     

Variation of sugary1 and shrunken2 gene frequency in different maize genetic backgrounds

Genotypes affect the survival of mutant genes in segregating populations. This study elucidates the effect of different maize genetic backgrounds on variation in gene frequency in sweet corn, sugary1 (su1) and sugary enhancer1 (se1), and supersweet corn, shrunken2 (sh2). Four sweet corn inbred lines and a supersweet synthetic were crossed to six field corn inbreds from diverse heterotic groups. The crosses were self‐pollinated and the F₂ population was recombined twice. Gene frequencies were calculated from grain frequencies. Variation of su1 frequency differed significantly from random drift and a significant linear reduction was observed for half of the su1su1Se1Se1Sh2Sh2 × Su1Su1Se1Se1Sh2Sh2 crosses. The su1 and sh2 frequencies suffered a significant linear reduction for most su1su1se1se1Sh2Sh2 × Su1Su1Se1Se1Sh2Sh2 and Su1Su1Se1Se1sh2sh2 × Su1Su1Se1Se1Sh2Sh2 crosses, respectively. Also, the residual sums of squares, due to deviations from the linear trend, were significant for some crosses due to frequency‐dependent selection and genotypic interactions. Viability of su1 and sh2 depended on the specific sweet × field corn genotype combination but was not related to field corn heterotic groups. The se1 gene could have a detrimental effect on su1 viability.     

Quantification of critical factors affecting fitness of the sugary1 mutant in maize

Fitness of sugary1 (su1) is affected by some critical traits that depend on the genotypes and environments, while their effects have not been quantified with convincing statistical methods. The objective of this work was to identify and quantify the critical factors of su1 fitness with different genotypes and environments. We used two pairs of field corn inbreds that differentially affected su1 viability to develop F₁, F₂, BC₁ and BC₂. After selfing, Su1 and su1 kernels were evaluated under controlled environmental conditions and in field trials. Multiple regressions showed that dry weight of juvenile plant was affected by early vigour (plant size, colour and health) and emergence in cold conditions; ear weight by plant appearance, number of plants and chlorophyll content; number of ears by plant appearance, number of plants, chlorophyll content and female flowering; and kernel weight by ear weight, number of plants, row number and ear length. The main critical factors for su1 fitness were early vigour and emergence under cold conditions at initial stages, while several adult traits were related with final fitness.     

Inbreeding depression in garden and glasshouse chrysanthemums: germination and survivorship

Summary Sixty-six chrysanthemum (Dendranthema grandiflora) inbred selections, noninbred cultivars and hybrids, and D. makinoi were the base populations from which up to three generations of inbreds were obtained using multiple plant descent. Each parent possessed pseudo-self compatibility (PSC), which allowed seed set following self pollination. Rapid-generation cycling (laboratory seed ripening to heart stage and subsequent embryo rescue) reduced generation time and minimized confounding maternal with zygotic inbreeding depression during post heart-stage seed development. Selection criteria were male/female fertility and PSC. Two stages of the life cycle were chosen to evaluate inbreeding depression: germination (seed development to germination) and survivorship (fertile individuals at anthesis). PSC was environmentally interactive and genotype dependent, causing variable levels of self seed set between and within populations and generations. By the end of the second generation, families from all noninbred cultivars, D. makinoi, and one F₁ hybrid were eliminated from the experiment due to self incompatibility and/or inbreeding depression. Post-germination inbreeding depression was severe in several advanced inbreds. Inbred progeny of most F₁ or F₂ hybrids expressed less or equal amounts of inbreeding depression compared to advanced inbreds. Linear regression coefficients for either germination or survivorship on percent homozygosity were negative. Correlation coefficients between percent germination and survivorship (as a percent of seed set) were highly significant for Minnesota inbreds (r=0.67, P0.002) and hybrids (r=0.67, P0.006). The correlation coefficient was higher when percent germination and survivorship (as a percent of germinated seedlings) were compared (r=0.95, P0.001).Abbreviations F Fisher's Coefficient of Inbreeding - IBD Inbreeding Depression - PSC Pseudo-self Compatibility - RGC Rapid Generation Cycle - SI Self Incompatibility     

Genotypic effects on field performance of maize plants carrying the allele sugary1

Some mutants reduce fitness when incorporated into breeding populations, particularly the allele sugary1 ( su1 ) into maize ( Zea mays L.). The objective of this study was to compare in different maize genetic backgrounds the performance of plants carrying su1 . The crosses among three su1 populations and three Su1 synthetics were random-mated three times. The Su1 and su1 plants were evaluated separately. The su1 plants had poorer performance than the Su1 plants, particularly at earlier stages of development, and early vigour seemed to be the most limiting factor for su1 plant development. The differences in performance between su1 and Su1 plants decreased during plant growth and were not significant for most adult traits. Specific combinations of donors and recipients of the su1 allele had different effects on performance of su1 plants. These results suggest that the use of defective mutants in plant breeding should take into account the genotypic effects on mutant fitness.     

Detection of linkage disequilibrium QTLs controlling low-temperature growth and metabolite accumulations in an admixed breeding population of <Emphasis Type="BoldItalic">Leymus</Emphasis> wildryes

Low-temperature soluble carbohydrate accumulations are commonly associated with anthocyanin coloration, attenuated growth, and cold adaptation of cool-season grasses. A total of 647 AFLP markers were tested for associations with anthocyanin coloration, tiller formation, leaf formation, cumulative leaf length, percent soluble carbohydrate, and dry matter regrowth among replicated clones of an admixed Leymus wildrye breeding population evaluated in low-temperature growth chambers. The admixed breeding population was derived from a heterogeneous population of L. cinereus × L. triticoides F₁ hybrids, with two additional generations of open pollination. Two AFLP linkage maps, constructed from two full-sib mapping populations derived from the same F₁ hybrid population, were integrated to produce a framework consensus map used to examine the distribution of marker-trait associations in the admixed F₁OP₂ population. Thirty-seven linkage blocks, spanning 258 cM (13.6%) of the 1895 cM consensus map, contained 119 (50%) of the 237 markers showing at least one possible trait association (P < 0.05). Moreover, 28 (68%) of the 41 most significant marker-trait associations (P < 0.005) were located in 15 QTL linkage blocks spanning 112.9 cM (6%) of the linkage map. The coincidence of these 28 significant marker-trait associations, and many less significant associations, in 15 relatively small linkage blocks (0.6 cM to 21.3 cM) provides evidence of admixture linkage disequilibrium QTLs (ALD QTLs) in this heterogeneous breeding population. At least four of the remaining 13 putative marker-trait associations (P < 0.005) were located in genetic map regions lacking other informative markers. The complexity of marker-trait associations results from heterogeneity within and substantial divergence among the parental accessions.     

Yield Components of Apical and Subapical Ear Contributing to the Grain Yield Responses of Prolific Maize at High and Low Plant Populations

Subapical ears are largely responsible for grain yield variations in prolific maize (Zea mays L.) grown under conditions favourable for the expression of prolificacy trait, but limited information exists on yield components contributing to yield responses. A field experiment was conducted to determine the yield components of apical and subapical ear in prolific maize after various pollination treatments at two plant populations. Hybrid Pioneer 3733 was grown in the perfect stands of 71 428 and 35 714 plants ha^?1. Three pollination treatments were carried out: (i) free pollination; (ii) subapical earshoots were covered to prevent pollination; and (iii) apical earshoots were covered to prevent pollination. Grain yields of free pollinated plants were by 50.1 % larger at low plant population (265 g per plant) than at high plant population (177 g per plant) due to a 45.3 % increase in kernels per plant, whereas 1000‐kernel weight slightly increased by 3.3 %. These increased kernels per plant at low plant population were, in part, the result of kernel increments on apical ear (10.1 %), and mainly associated with kernels from subapical ears that did not occur at high plant population. At low plant population, the total grain yield per plant was reduced by 94 g (35.5 %) after the apical ear was bagged to prevent pollination, but only 52 g (19.6 %) when the subapical ear was bagged. When subapical ear development was stopped at low plant population, grain yield on apical ears increased by only 3.9 % as a result of heavier 1000‐kernel weights, clearly demonstrating limitations in kernel set and size. After grain development on apical ear was prevented, subapical ear enlarged to 80.3 % of maximum apical ear yield because the former had, on average, 2.5 % lighter 1000‐kernel weight and 17.5 % fewer kernels than the latter. Ears did not differ in row number when only apical or subapical ear was developed on plant, whereas subapical ears tended to have fewer rows than apical ears when both were present on the same plant. Our results showed that: (i) plant population affected all yield components on both apical and subapical ear except row number; (ii) the occurrence of subapical ear is triggered by achieving maximum potential kernel set on apical ear; and (iii) subapical ear is inferior in potential grain yield to apical one even when the latter was prevented from pollination.     

Localization of QTL for basal root thickness in <Emphasis Type="Italic">japonica</Emphasis> rice and effect of marker-assisted selection for a major QTL

Root traits are key components of plant adaptation to drought environment. By using a 120 recombined inbred lines (RILs) rice population derived from a cross between IRAT109, a japonica upland rice cultivar and Yuefu, a japonica lowland rice cultivar, a complete genetic linkage map with 201 molecular markers covering 1,833.8 cM was constructed and quantitative trait loci (QTLs) associated with basal root thickness (BRT) were identified. A major QTL, conferring thicker BRT, located on chromosome 4, designated brt4, explained phenotypic variance of 20.6%, was selected as target QTL to study the effects of marker-assisted selection (MAS) using two early segregating populations derived from crosses between IRAT109 and two lowland rice cultivars. The results showed that the flanking markers of brt4 were genetically stable in populations with different genetic backgrounds. In the two populations under upland conditions, the difference between the means of BRT of plants carrying positive and negative favorable alleles at brt4 flanking markers loci was significant. Phenotypic effects of BRT QTL brt4 were 5.05–8.16%. When selected plants for two generations were planted at Beijing and Hainan locations under upland conditions, MAS effects for BRT QTL brt4 were 4.56–18.56% and 15.46–26.52% respectively. The means of BRT for the homozygous plants were greater than that of heterozygous plants. This major QTL might be useful for rice drought tolerance breeding. L. Liu and P. Mu are contributed equally to this work.     

Pedigree selection for Gibberella ear rot resistance in maize

The pedigree method is often used for developing inbred lines in maize (Zea mays L.). This study was conducted to assess the effectiveness of pedigree selection for improving resistance to Gibberella ear rot in four maize populations. Selection was based on the severity of ear rot symptoms after inoculation with macroconidial suspensions of Fusarium graminearum (Schwabe) into the silk channel (for two populations) and into the developing kernels (for two other populations). Samples of the selfed families (S₁ to S₅), recovered from remnant seed from the selection programs, were evaluated for disease resistance during three years, using inoculation and evaluation protocols similar to those used during selection. Among-family selection was effective in both of the populations selected after silk inoculation and in one of the populations selected after kernel inoculation. Responses to selection were more evident in later than in earlier generations for both types of inoculation. Changes in the estimated genetic gain over generations were consistent with changes in the variances among families, which tended to increase in early generations and to decrease in later generations. Selection after kernel inoculation seemed to have been more effective than selection after silk inoculation in developing families with more stable resistance. Based on the results obtained here, it seems that responses to family selection could be accelerated without increasing operational costs by increasing selection intensity in later generations and inoculating fewer plants per family.     

Tagging the juvenile locus in soybean [Glycine max (L.) Merr.] with molecular markers

Soybean cultivars carrying the `long juvenile trait' show a delayed flowering response under short day conditions. The incorporation of this character into genotypes of agronomic interest may allow a broader range of sowing dates and latitudes for a single cultivar adaptation. The objective of this work was to identify molecular markers linked to the juvenile locus in soybean. Experiments were carried out using two pairs of near isogenic lines(NILs) differing in the presence of the long juvenile trait, and RAPD markers. Four hundred primers were first screened to find polymorphism associated with the trait. Additional differences between NILs were sought by digesting the genomic DNA with five restriction enzymes. Polymorphic fragments detected between NILs were tested for linkage to the juvenile locus in the corresponding F₂ segregating populations. Marker bc357-HaeIII was linked (χ²L = 46.316) to the juvenile locus with an estimated recombination frequency of 0.13 ± 0.03in one of the genetic backgrounds studied. The fragment was cloned, sequenced and converted into a SCAR marker. Moreover,bc357-HaeIII was used as RFLP probe. Both, SCAR and RFLP generated markers linked to the juvenile locus in the two genetic backgrounds analysed. Results presented in this work can be utilised for both, the localisation of the gene associated with the character and for tagging the juvenile trait in soybean breeding programs. This revised version was published online in August 2006 with corrections to the Cover Date.     

The development of Raparadish (x Brassicoraphanus, 2n=38), a new crop in agriculture

Summary Raparadish, x Brassicoraphanus, the amphidiploid hybrid between Brassica rapa (syn. B.campestris) and Raphanus sativus (fodder radish) was made by Dolstra (1982). Primary hybrid plants grew vigorously, suggesting that the amphidiploid AARR might be useful as a fodder crop. Three populations of this new material were studied, with special attention to improvement of fertility and resistance to beet cyst nematode (Heterodera schachtii), whilst preserving genetic variability. For lack of progress one of the populations was abandoned after the fourth generation. The other two populations were observed through nine or ten generations. Apart from the last two generations mass selection for seed set was carried out on the basis of single plants. This led to a considerable increase in average seed production, without losing a wide variation for this trait. Thus more progress is being expected. Five cycles of mass selection for resistance to beet cyst nematodes led to a considerable increase of the level of resistance of both populations. The prospects of this new agricultural crop are discussed.     

Resistance in the leaf and stem of sunflower after infection with two isolates of Phomopsis

Phomopsis helianthi (sexual stage Diaporthe helianthi) is a major disease in most sunflower growing countries. The objectives of this study were (1) to investigate whether resistance to Phomopsis differs between the leaf and stem tissue and (2) to examine the genetic variation for resistance to Phomopsis in sunflower inbreds. A set of 16 inbred lines was tested using artificial leaf infection with mycelial explants. The lines were screened for their reaction on leaf and stem in four environments to a French Phomopsis isolate and in two environments to a Yugoslavian isolate. Significant genetic variance and mostly high genetic ratios (analogous to heritability) were found for all resistance traits. While fungal growth reflected resistance to Phomopsis in the leaf, petiole score was associated with leaf length. Stem lesion proved to be the most suitable trait for evaluating resistance in the petiole-stem passage. No correlation existed between resistance in the leaf and stem, suggesting that both resistance factors are inherited independently. Both isolates resulted in similar resistance rankings of the inbreds and no difference in their aggressiveness was detected with regard to leaf resistance. Screening for Phomopsis consisting of several steps is recommended, beginning with petiole score or fungal growth to select the most susceptible plants in the early testing, and measuring stem lesion in further generations of breeding.     

Winter environment increases self seed yield in self-incompatible (SI) Petunia hybrida clones

Summary SI inbreds of P. hybrida and crosses between self-incompatible (SI) petunia plants were brought to flower under winter and summer glasshouse conditions. SI response, as measured by self seed, ranged from zero seed set under both conditions to low or zero seed set during the summer and high seed set during the winter. Some plants produced comparable seed yields during either pollination time. Increased expression of pseudo-self-compatibility (PSC) during the winter months was attributed to a breakdown of the Si system by the low light conditions of Minnesota winters (45°N). Genotypic differences within and between populations in the winter provided differences facilitating selection for increased SI. These differences were masked in some populations by the summer environmental conditions. The use of simulated or natural low light conditions as a technique for selecting for SI should increase selection efficiency.Scientific Journal Series Paper Number 10,499 of the Minnesota Agricultural Experiment Station.     

Development and validation of gene-based markers for shrunken2-Reference allele and their utilization in marker-assisted sweet corn (Zea mays Sachharata) breeding programme

The recessive shrunken2-Reference (sh2-Ref) allele is traditionally used in sweet corn cultivar development worldwide. However, non-availability of suitable gene-based marker(s) for sh2-Ref has considerably delayed its utilization in molecular breeding. Here, 7,320 bp sequence of Sh2 gene among five wild- and six sh2-Ref-based inbreds was analysed by employing 13 overlapping primers. SNP583 (A in wild and G in mutant) and SNP755 (T in wild and C in mutant) in 5’UTR, and SNP5112 (C in wild and T in mutant) in intron-12 clearly differentiated dominant (Sh2) and recessive (sh2-Ref) allele. These SNPs were used to develop four gene-based PCR markers. The newly developed markers were validated in six F₂ populations segregating for sh2-Ref allele, and 230 diverse inbreds of normal and sweet corn types. These markers were further used in genotyping of BC₁F₁ populations leading to successful selection of sh2-Ref allele in the marker-assisted breeding. Globally, this assumes great significance in molecular breeding of sweet corn.     

Vernalization response and earliness per se in cultivars representing different eras of wheat breeding in Argentina

Argentine wheat cultivars are assumed to be essentially vernalization insensitive or very slightly sensitive. However, there are only speculations on this lack of vernalization requirement and a greater unawareness on the variation in earliness per se. The aims of this research have been to determine the extent of variability in vernalization requirement and earliness per se, and how the variability in both traits was produced by breeding programs, through the release of wheat cultivars from the 1930's to the 1990's in Argentina. Sixty-eight cultivars, selected among those of highest performance in each era, were evaluated under field and glasshouse conditions for their vernalization response and earliness per se. Forty per cent of the cultivars showed some vernalization response. There was a decrease in this requirement along the first decades of the analysed breeding period, likely in response to the considerable introgression of CIMMYT germplasm. This initial trend to release earlier cultivars was also evidenced in a clear decrease in earliness per se. As this tendency in both characteristics was reverted during the last two decades, it may denote that certain vernalization response and not extreme earliness per se, may contribute to achieve higher yield cultivars in our area. This revised version was published online in July 2006 with corrections to the Cover Date.     

Interspecific crosses as a tool in breeding Poapratensis L. 1. Poalongifolia Trin × P. pratensis L.

Summary By crossing amphimictic P. longifolia and apomictic P. pratensis fertile hybrids were obtained. In F₂ populations a vast range of types was observed. New combinations were found, which is shown by data on plant length and hairiness of the lemma. Crossing F₁ hybrids with P. pratensis gave more P. pratensis-like plants. Data on seed yield, uniformity and turf performance in later generations are given. The implications for breeding are discussed and it is concluded that interspecific crosses can be used for introducing a sexual phase in P. pratensis breeding. Non-hairiness of the lemma can be incorporated.     

Influence of the maize Sugary1 locus on genetics of economically important traits

Knowledge of genetic control of mutant viability is of great importance in maize breeding, particularly for mutants with deleterious effects. Little is known about the genetics of the viability of mutants and no previous report has been published concerning the genetic effects of the mutant sugary1 on agronomic traits. Our objective was to study the effects of the sweetcorn mutant sugary1 (su1) on the genetic effects of agronomic traits in two wild type corn backgrounds. Estimated genetic effects of agronomic traits in Su1 versus su1 plants were monitored through four successive selfpollination cycles in two separated mean generation designs. The first involved two Corn Belt inbred lines A619 and A632, while unrelated inbred lines EP42 and A631 were used for the second design. Parents, F₁s, F₂s, and backcrosses were crossed to the su1 inbred P39 as the donor of su1 and the 12 crosses were successively selfpollinated for 4 years. For each cross, Su1 and su1 seeds were separated and evaluated in 10 × 10 triple lattice designs. The Su1 plants showed higher performance than the su1 plants in almost all traits. The estimates of genetic effects of Su1 versus su1 plants were strongly affected by the su1 × wild type corn interactions. The introgression of su1 in wild type corn strongly affects the genetic effects of flowering time and, to a lesser stent, that of other plant or ear traits. Mutant viability is regulated by additive, dominance and digenic epistatic effects and the importance of those genetic effects depends on the genetic background and environmental conditions.     

The Effect of Carbohydrate Composition and Concentration on Anther Culture Response in Barley (Hordeum vulgare L.)

Culture medium composition is critical for the successful induction of microspore division in vitro. The present experiments have focused on a relatively neglected area of cell and tissue culture research, namely the carbohydrate component used in the medium. Three spring barley genotypes were cultured on a medium which was modified by replacing sucrose with the following carbohydrates (6 % w/v): maltose, fructose, malt extract, galactose and a glucose (3 % w/v)/fructose (3 % w/v) mixture. Both maltose and malt extract were superior to sucrose in their capacity to induce green plantlet differentiation from microspores. The concentrations of both sucrose and maltose were also varied. Overall the response of anthers on maltose based media was higher than on sucrose based media. Furthermore, a concentration of maltose m the range 6—12 % w/v produced a higher frequency of green plants than a low concentration (1—3 % w/v). The effect of maltose based media on germplasm of direct relevance to barley breeders was also tested. The cultivar ‘Blenheim’ was shown to be very responsive and this genetic factor was transmitted to the F₁ hybrid. The frequency of haploid to diploid regenerants was not consistent over genotypes, but in general there were more haploid than diploid regenerants. The implications of these results for barley breeding are discussed.     

Increased resistance to <Emphasis Type="Italic">Ustilago zeae</Emphasis> and <Emphasis Type="Italic">Fusarium verticilliodes</Emphasis> in maize inbred lines bred for <Emphasis Type="Italic">Fusarium graminearum</Emphasis> resistance

Preliminary field observations in our maize breeding nurseries indicated that breeding for improved resistance to gibberella ear rot (Fusarium graminearum) in maize may indirectly select for resistance to another ear disease, common smut (Ustilago zeae). To investigate this, we compared the disease severity ratings obtained on 189 maize inbreds, eight of which included our inbreds developed with selection for gibberella ear rot resistance after field inoculation and breeding for 8–10 years. No correlation was found between disease severities for the 189 inbreds but the eight gibberella-resistant lines were consistently more resistant to smut. To further examine this relationship and to determine if these eight inbreds would be useful for developing inbreds with either common smut or fusarium ear rot (F. verticilliodes) resistance, we conducted a Griffing’s diallel analysis on six inbreds of maize, four with high levels of gibberella ear rot resistance representing all of the pedigree groups in our eight gibberella lines, and two with very low levels. Our most gibberella ear rot resistant inbreds, CO433 and CO441, had the lowest disease ratings for all three diseases, the consistently largest general combining ability effects and several significant specific combining ability effects. It was concluded that some inbreds bred specifically for gibberella ear rot would also be useful in breeding for resistance to common smut and fusarium ear rot.     

Molecular characterization of endosperm and amino acids modifications among quality protein maize inbreds

Modifier loci in QPM play a vital role in achieving acceptable degree of kernel hardness and accumulation of lysine and tryptophan. This study was undertaken to characterize a set of diverse QPM inbreds using SSRs linked to endosperm and amino acids modifier loci for their effective utilization in the breeding programme. Significant variation was observed for endosperm modification (25–100% opaqueness), tryptophan (0.056–0.111%) and lysine (0.223–0.444%). Generally, inbreds with soft endosperm possessed more tryptophan and lysine than inbreds with higher vitreousness. SSRs generated 341 alleles with two to seven alleles per locus. The frequency of unique and rare alleles was more for amino acid modifications, compared to endosperm modifications. Phylogenetic analyses grouped the inbreds into three major clusters, and the study identified suitable crosses for accumulation of endosperm and amino acids modifiers. QPM inbreds with desirable modifications identified here would serve as suitable donor for both opaque2 and modifier loci in the marker‐assisted backcross breeding. Further, contrasting inbreds can be used for generating mapping populations to identify new modifier loci underlying both endosperm and amino acids modifications.