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1.

Context

The metacommunity concept helps to understand how local and regional processes regulate species distributions in landscapes. Metacommunity structure is often assumed as static, but may be rather dynamic, following temporal changes along environmental gradients.

Objectives

We present an empirical test of the temporal dynamics of metacommunity structure, using small mammals in an Atlantic Forest landscape as a model system.

Methods

We analyzed incidence matrices using the Elements of Metacommunity Structure framework and evaluated whether local, landscape, and spatial factors structured the metacommunity during different climatic seasons (HS?=?humid; SHS?=?super-humid) and time periods (1?=?1999–2001; 2?=?2005–2009). We compared HS-1 and SHS-1 to evaluate if metacommunity structure varies between seasons, and HS-1 and HS-2 to evaluate if it varies between time periods.

Results

Metacommunity structure changed from Clementsian (HS-1) to random (SHS-1), but during HS-2 it was Clementsian again. This suggests that groups of species are responding similarly to the major gradient of variation during the HS only. Patch size structured the metacommunity during both humid periods, and local habitat structure only during HS-1. We suggest that during the SHS these gradients are lost due to increased matrix permeability to movement, which homogenizes local communities resulting in a random structure.

Conclusions

Species habitat requirements and specializations determined metacommunity structure, but only during the HS. The Clementsian structure indicates that forest disturbances may result in the loss of whole groups of species during the HS. Alternating patterns of metacommunity structure may be associated to changes on matrix suitability between seasons.
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2.
3.

Context

Landscape and habitat filters are major drivers of biodiversity of small habitat islands by influencing dispersal and extinction events in plant metapopulations.

Objectives

We assessed the effects of landscape and habitat filters on the species richness, abundance and trait composition of grassland specialist and generalist plants in small habitat islands. We studied traits related to functional spatial connectivity (dispersal ability by wind and animals) and temporal connectivity (clonality and seed bank persistence) using model selection.

Methods

We sampled herbaceous plants, landscape (local and regional isolation) and habitat filters (inclination, woody encroachment and disturbance) in 82 grassland islands in Hungary.

Results

Isolation decreased the abundance of good disperser specialist plants due to the lack of directional vectors transferring seeds between suitable habitat patches. Clonality was an effective strategy, but persistent seed bank did not support the survival of specialist plants in isolated habitats. Generalist plants were unaffected by landscape filters due to their wide habitat breadth and high propagule availability. Clonal specialist plants could cope with increasing woody encroachment due to their high resistance against environmental changes; however, they could not cope with intensive disturbance. Steep slopes providing environmental heterogeneity had an overall positive effect on species richness.

Conclusions

Specialist plants were influenced by the interplay of landscape filters influencing their abundance and habitat filters affecting species richness. Landscape filtering by isolation influenced the abundance of specialist plants by regulating seed dispersal. Habitat filters sorted species that could establish and persist at a site by influencing microsite availability and quality.
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4.

Context

Ecological processes that shape diversity and spatial pattern of ecological communities are often altered by disturbance. Spatial patterns (spatial autocorrelation) in species diversity are thus expected to change with disturbance.

Objective

When examining spatial patterns, ecologists traditionally lump positive and negative spatial autocorrelation into the overall spatial autocorrelation. By contrast, here we aim to understand disturbance effects on both positive and negative spatial autocorrelation of species richness and evenness, which may be related to environmental filtering and restricted dispersal, and to competition, respectively.

Methods

For 8 years, we monitored the spatial autocorrelation in species richness and evenness of riparian plant communities in both uncut control and experimentally clearcut sites in the boreal forest of Alberta, Canada. The overall spatial autocorrelation for each of these two indices of diversity was separately decomposed into the components of positive and negative spatial autocorrelations through eigendecomposition of the spatial weighting matrix.

Results

Negative spatial autocorrelation in richness and evenness were more pronounced in the clearcut than uncut sites, although positive spatial autocorrelations in all indices of diversity remained unchanged. Effect of disturbance was not detected on the overall spatial autocorrelation.

Conclusions

Disturbance increases negative spatial autocorrelation in species richness and evenness, with a stronger increase in evenness than richness, which underscores the importance of competition in structuring post-disturbance riparian communities. Our results also highlight the need for assessing positive and negative spatial autocorrelation and different aspects of diversity separately in understanding disturbance effects on the spatial pattern, or identifying processes from patterns.
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5.

Context

Despite decades of research, there is an intense debate about the consistency of the hump-shaped pattern describing the relationship between diversity and disturbance as predicted by the intermediate disturbance hypothesis (IDH). Previous meta-analyses have not explicitly considered interactive effects of disturbance frequency and intensity of disturbance on plant species diversity in terrestrial landscapes.

Objective

We conducted meta-analyses to test the applicability of IDH by simultaneously examining the relationship between species richness, disturbance frequency (quantified as time since last disturbance as originally proposed) and intensity of disturbance in forest landscapes.

Methods

The effects of disturbance frequency, intensity, and their interaction on species richness was evaluated using a mixed-effects model.

Results

We found that species richness peaks at intermediate frequency after both high and intermediate disturbance intensities, but the richness-frequency relationship differed between intensity classes.

Conclusions

Our study highlights the need to measure multiple disturbance components that could help reconcile conflicting empirical results on the effect of disturbance on plant species diversity.
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6.

Context

A challenge devising revegetation strategies in fragmented landscapes is conserving for the widest spectrum of biodiversity. Habitat network reconstruction should improve landscape capacity to maintain species populations. However, the location of revegetation often fails to account for species occurrence and dispersal processes operating across spatial scales.

Objectives

Our objective was to integrate metapopulation theory with estimates of landscape capacity and dispersal pathways to highlight connectivity gaps. Maintenance of populations could thereby be facilitated through reconnecting habitat networks across regional and broader scales, with assumed benefit for the dispersal needs of less sensitive species.

Methods

Predicted occupancy and metapopulation capacity were calculated for a generic focal species derived from fragmentation-sensitive woodland birds, mammals and reptiles. A metapopulation connectivity analysis predicted regional dispersal links to identify likely routes through which individuals may move to contribute to the viability of the population. We used the revegetation programmes of the Brigalow–Nandewar Biolinks project, eastern New South Wales, Australia, to demonstrate our approach.

Results

Landscape capacity of the current landscape varied across the region. Low-value links between populations provided greatest opportunities for revegetation and improved landscape capacity. Where regional connectivity did not indicate a pathway between populations, broader scale connectivity provided guidance for revegetation.

Conclusions

The metapopulation-based model, coupled with a habitat dispersal network analysis, provided a platform to inform revegetation locations and better support biodiversity. Our approach has application for directing on-ground action to support viable populations, assess the impact of revegetation schemes or monitor the progress of staged implementations.
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7.

Context

Many aquatic communities are linked by the aerial dispersal of multiple, interacting species and are thus structured by processes occurring in both the aquatic and terrestrial compartments of the ecosystem.

Objectives

To evaluate the environmental factors shaping the aquatic macroinvertebrate communities associated with tank bromeliads in an urban landscape.

Methods

Thirty-two bromeliads were georeferenced to assess the spatial distribution of the aquatic meta-habitat in one city. The relative influence of the aquatic and terrestrial habitats on the structure of macroinvertebrate communities was analyzed at four spatial scales (radius = 10, 30, 50, and 70 m) using redundancy analyses.

Results

We sorted 18,352 aquatic macroinvertebrates into 29 taxa. Water volume and the amount of organic matter explained a significant part of the taxa variance, regardless of spatial scale. The remaining variance was explained by the meta-habitat size (i.e., the water volume for all of the bromeliads within a given surface area), the distance to the nearest building at small scales, and the surface area of buildings plus ground cover at larger scales. At small scales, the meta-habitat size influenced the two most frequent mosquito species in opposite ways, suggesting spatial competition and coexistence. Greater vegetation cover favored the presence of a top predator.

Conclusions

The size of the meta-habitat and urban landscape characteristics influence the structure of aquatic communities in tank bromeliads, including mosquito larval abundance. Modifications to this landscape will affect both the terrestrial and aquatic compartments of the urban ecosystem, offering prospects for mosquito management during urban planning.
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8.

Context

Knowledge of how environmental gradients generate changes in community composition across forest landscapes (β-diversity) represents a critical issue in the era of global change, which exerts especially powerful impacts by shifting disturbance regimes.

Objectives

We analyzed the response of tree communities to increased disturbance rates that were linked to European settlement at the temperate-boreal interface of eastern Canada. We tested whether disturbance has led to spatial homogenization or heterogenization, and to decoupling or strengthening of community-environment relationships.

Methods

We used a reconstruction of pre-industrial tree communities based on historical land survey records (1854–1935), together with modern data, to assess changes in tree β-diversity patterns. Then, β-diversity was partitioned into fractions explained by spatial (dbMEM) and environmental variables (latitude, elevation, slope, drainage and surface deposits) in order to assess changes in spatial structures and community-environment relationships.

Results

In pre-industrial times, environmental variables explained only a small proportion of β-diversity since dominant taxa were present across the range of environmental gradients, whereas habitat specialists were very rare. Between pre-industrial and modern times, our analysis highlights an increase in β-diversity and the proportion of β-diversity that was explained by environmental variables. Increased disturbance rates have favored early-successional habitat specialist taxa and reduced the habitat breadth of pre-industrial generalists, thereby increasing the strength of community-environment relationships.

Conclusions

Our results support that disturbance can alter the strength of community-environment relationships and also suggest that functional traits of species within the regional pool could predict whether or not disturbance alters such relationships.
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9.

Context

Forest landscape models (FLMs) are important tools for simulating forest changes over broad spatial and temporal scales. The ability of FLMs to accurately predict forest changes may be significantly influenced by the formulations of site-scale processes including seedling establishment, tree growth, competition, and mortality.

Objective

The objectives of this study were to investigate the effects of site-scale processes and interaction effects of site-scale processes and harvest on landscape-scale forest change predictions.

Methods

We compared the differences in species’ distribution (quantified by species’ percent area), total aboveground biomass, and species’ biomass derived from two FLMs: (1) a model that explicitly incorporates stand density and size for each species age cohort (LANDIS PRO), and (2) a model that explicitly tracks biomass for each species age cohort (LANDIS-II with biomass succession extension), which are variants from the LANDIS FLM family with different formulations of site-scale processes.

Results

For early successional species, the differences in simulated distribution and biomass were small (mostly less than 5 %). For mid- to late-successional species, the differences in simulated distribution and biomass were relatively large (10–30 %). The differences in species’ biomass predictions were generally larger than those for species’ distribution predictions. Harvest mediated the differences on landscape-scale predictions.

Conclusions

The effects of site-scale processes on landscape-scale forest change predictions are dependent on species’ ecological traits such as shade tolerance, seed dispersal, and growth rates.
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10.

Context

Seed dispersal is recognized as having profound effects on the distribution, dynamics and structure of plant populations and communities. However, knowledge of how landscape structure shapes carnivore-mediated seed dispersal patterns is still scarce, thereby limiting our understanding of large-scale plant population processes.

Objectives

We aim to determine how the amount and spatial configuration of forest cover impacted the relative abundance of carnivorous mammals, and how these effects cascaded through the seed dispersal kernels they generated.

Methods

Camera traps activated by animal movement were used for carnivore sampling. Colour-coded seed mimics embedded in common figs were used to know the exact origin of the dispersed seed mimics later found in carnivore scats. We applied this procedure in two sites differing in landscape structure.

Results

We did not find between-site differences in the relative abundance of the principal carnivore species contributing to seed dispersal patterns, Martes foina. Mean dispersal distance and the probability of long dispersal events were higher in the site with spatially continuous and abundant forest cover, compared to the site with spatially aggregated and scarcer forest cover. Seed deposition closely matched the spatial patterning of forest cover in both study sites, suggesting behaviour-based mechanisms underpinning seed dispersal patterns generated by individual frugivore species.

Conclusions

Our results provide the first empirical evidence of the impact of landscape structure on carnivore-mediated seed dispersal kernels. They also indicate that seed dispersal kernels generated strongly depend on the effect that landscape structure exerts on carnivore populations, particularly on habitat-use preferences.
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11.

Context

Land use changes have modified the extent and structure of native vegetation, resulting in fragmentation of native species habitat. Connectivity is increasingly seen as a requirement for effective conservation in these landscapes, but the question remains: ‘connectivity for which species?’.

Objective

The aim of this study was to develop and then apply a rapid, expert-based, dispersal guild approach where species are grouped on similar fine-scale dispersal behaviour (such as between scattered trees) and habitat characteristics.

Methods

Dispersal guilds were identified using clustering techniques to compare dispersal and habitat parameters elicited from experts. We modelled least-cost paths and corridors between patches and individual movement probabilities within these corridors for each of the dispersal guilds using Circuitscape. We demonstrate our approach with a case study in the Tasmanian Northern Midlands, Australia.

Results

The dispersal guild approach grouped the 12 species into five dispersal guilds. The connectivity modelling of those five guilds found that broadly dispersing species in this landscape, such as medium-sized carnivorous mammals, were unaffected by fragmentation while from the perspective of the three dispersal guilds made up of smaller mammals, the landscape appeared highly fragmented.

Conclusions

Our approach yields biologically defensible outputs that are broadly applicable, particularly for conservation planning where data and resources are limited. It is a useful first step in multi-species conservation planning which aims to identify those species most in need of conservation efforts.
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12.

Context

Interactions among disturbances, climate, and vegetation influence landscape patterns and ecosystem processes. Climate changes, exotic invasions, beetle outbreaks, altered fire regimes, and human activities may interact to produce landscapes that appear and function beyond historical analogs.

Objectives

We used the mechanistic ecosystem-fire process model FireBGCv2 to model interactions of wildland fire, mountain pine beetle (Dendroctonus ponderosae), and white pine blister rust (Cronartium ribicola) under current and future climates, across three diverse study areas.

Methods

We assessed changes in tree basal area as a measure of landscape response over a 300-year simulation period for the Crown of the Continent in north-central Montana, East Fork of the Bitterroot River in western Montana, and Yellowstone Central Plateau in western Wyoming, USA.

Results

Interacting disturbances reduced overall basal area via increased tree mortality of host species. Wildfire decreased basal area more than beetles or rust, and disturbance interactions modeled under future climate significantly altered landscape basal area as compared with no-disturbance and current climate scenarios. Responses varied among landscapes depending on species composition, sensitivity to fire, and pathogen and beetle suitability and susceptibility.

Conclusions

Understanding disturbance interactions is critical for managing landscapes because forest responses to wildfires, pathogens, and beetle attacks may offset or exacerbate climate influences, with consequences for wildlife, carbon, and biodiversity.
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13.

Context

Changes in land use have disruptive effects on community structure, causing many species to disappear, though a few thrive and become pests.

Objectives

To gain understanding on how anthropogenic activity changes spatial patterns of native species diversity while favoring pests, we conducted rapid biodiversity assessments of dacine fruit flies across eight regions in Southeast Asia.

Methods

Male lure traps were maintained for 2 days along transects at 233 sites, in forest, agricultural and urban environments.

Results

A total of 8393 individuals were collected, belonging to 57 described and 4 new or unidentified species. The majority (78 %) of individuals belonged to 14 pest species, dominated by Bactrocera dorsalis (Hendel). The 57 species represent 38 % of those recorded from the region, indicating effective sampling. Individual flies were collected in highest numbers in urban and agricultural sites, but species diversity was low. Forest samples yielded fewer specimens but highest species diversity, suggesting a shift in community structure after disturbance, benefiting a few pest species at the expense of the broader community, even in the same genus and ecological guild.

Conclusions

Dacine fruit flies may be useful in assessing habitat quality and bait systems permit the execution of rapid biodiversity and multi-species conservation assessments. Our results apply to broader patterns concerning biodiversity loss and the emergence of pest species under increasingly intensive land use gradients, and demonstrate the remarkable loss of biodiversity over very narrow distances as forest is converted into agricultural use, hence the importance in maintaining a mosaic of native habitats.
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14.

Context

The geographic ranges of many species are responding to ongoing environmental change. Processes operating at different levels of biological organization, with corresponding spatial extents and grains and temporal rates, interact with the evolving configuration of environmental conditions to determine range dynamics.

Objectives

To synthesize understanding of scales and scaling, including relevant biological levels of organization, focusing on the processes that mediate species-environment relationships and the models used to make inferences about species distributions.

Methods

We review concepts related to the scaling of geographic ranges and implications for the most commonly used analytic methods, using simple simulations to illustrate important issues.

Results

Many processes lead to species distributions being dependent on environmental conditions within sites and within a neighborhood. Studies with large extents and fine grains can cut across several levels of biological organization (individual, within-population, and metapopulation processes) complicating interpretation. Many geographic ranges are not in dynamic equilibrium, but common models used for inference assume equilibrium. Interspecific interactions shape species distributions at multiple scales, and arguments for ignoring species interactions also assume equilibrium.

Conclusions

There is a need for timely science to inform policy and management decisions; however, we must also strive to provide predictions that best reflect our understanding of ecological systems. Species distributions evolve through time and reflect responses to environmental conditions that are mediated through individual and population processes. Species distribution models that reflect this understanding, and explicitly model dynamics, are likely to give more accurate predictions.
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15.

Context

The problem of how ecological mechanisms create and interact with patterns across different scales is fundamental not only for understanding ecological processes, but also for interpretations of ecological dynamics and the strategies that organisms adopt to cope with variability and cross-scale influences.

Objectives

Our objective was to determine the consistency of the role of individual habitat patches in pattern-process relationships (focusing on the potential for dispersal within a network of patches in a fragmented landscape) across a range of scales.

Methods

Network analysis was used to assess and compare the potential connectivity and spatial distribution of highland fynbos habitat in and between protected areas of the Western Cape of South Africa. Connectivity of fynbos patches was measured using ten maximum threshold distances, ranging from five to 50 km, based on the known average dispersal distances of fynbos endemic bird species.

Results

Network connectivity increased predictably with scale. More interestingly, however, the relative contributions of individual protected areas to network connectivity showed strong scale dependence.

Conclusions

Conservation approaches that rely on single-scale analyses of connectivity and context (e.g., based on data for a single species with a given dispersal distance) are inadequate to identify key land parcels. Landscape planning, and specifically the assessment of the value of individual areas for dispersal, must therefore be undertaken with a multi-scale approach. Developing a better understanding of scaling dependencies in fragmenting landscapes is of high importance for both ecological theory and conservation planning.
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16.

Context

Connectivity has become a top conservation priority in response to landscape fragmentation. Many methods have been developed to identify areas of the landscape with high potential connectivity for wildlife movement. However, each makes different assumptions that may produce different predictions, and few comparative tests against empirical movement data are available.

Objectives

We compared predictive performance of the most-used connectivity models, cost-distance and circuit theory models. We hypothesized that cost-distance would better predict elk migration paths, while circuit theory would better predict wolverine dispersal paths, due to alignment of the methods’ assumptions with the movement ecology of each process.

Methods

We used each model to predict elk migration paths and wolverine dispersal paths in the Greater Yellowstone Ecosystem, then used telemetry data collected from actual movements to assess predictive performance. Methods for validating connectivity models against empirical data have not been standardized, thus we applied and compared four alternative methods.

Results

Our findings generally supported our hypotheses. Circuit theory models consistently predicted wolverine dispersal paths better than cost-distance, though cost-distance models predicted elk migration paths only slightly better than circuit theory. In most cases, our four validation methods supported similar conclusions, but provided complementary perspectives.

Conclusions

We reiterate suggestions that alignment of connectivity model assumptions with focal species movement ecology is an important consideration when selecting a modeling approach for conservation practice. Additional comparative tests are needed to better understand how relative model performance may vary across species, movement processes, and landscapes, and what this means for effective connectivity conservation.
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17.

Context

Habitat loss, especially within agriculture, can be a threat to biodiversity. However, biodiversity may respond slowly to habitat loss, taking time to undergo successional change following a disturbance. Despite the fact that historic processes often mediate current patterns of biodiversity, most studies focus only on contemporary factors.

Objectives

Our research examines how both contemporary and historic environmental factors impact current pollinator community similarity, or beta-diversity. We examine two hypotheses: H1) contemporary land-use predicts community similarity, but also that land-use history has long-lasting effects on beta-diversity; H2) the specific response to contemporary and historic environmental factors is explained by variation in pollinator species life-history traits.

Methods

We sampled 36 pollinator communities over a three-year period across cotton fields varying in historic and contemporary land-use. Using multiple regression on distance matrices (MRDM), we investigate correlations between community similarity and differences in contemporary and historic environmental factors.

Results

First, we show that increased time between sampling events and the loss of semi-natural habitat over a 19-year period led to decreased community similarity. Interestingly, neither geographic distance nor contemporary environmental factors contributed to similarity. Second, we show that much of the variation in community similarity is due to variation in pollinator species life-history traits, such as foraging ability and diet breadth.

Conclusions

Results indicate that land-use history has long-lasting effects on community composition, greater than effects exhibited by contemporary factors. These legacy effects are critical considerations for conservation as their omission may lead to overly optimistic assessments of biodiversity in recently disturbed habitats.
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18.

Context

The Rainwater Basin region in south-central Nebraska supports a complex network of spatially-isolated wetlands that harbor diverse floral and faunal communities. Since European settlement, many wetlands have been lost from the network, which has increased distances among remaining wetlands. As a result, populations of wildlife species with limited dispersal capabilities may have become isolated and face greater local extinction risks.

Objectives

We compared the pre-European settlement and current extent of the Rainwater Basin network to assess the effects of wetland losses on network connectivity for a range of maximum dispersal distances.

Methods

We constructed network models for a range of maximum dispersal distances and calculated network metrics to assess changes in network connectivity and the relative importance of individual wetlands in regulating flow.

Results

Since European settlement, the number of wetlands in the Rainwater Basin has decreased by?>?90%. The average distance to the nearest neighboring wetland has increased by 150% to ~?1.2 km, and the dispersal distance necessary to travel throughout the whole network has increased from 3.5 to 10.0 km. Last, relative importance of individual wetlands depended on the maximum dispersal distance. Which wetlands to preserve to maintain connectivity might therefore depend on the dispersal capabilities of the species or taxa of interest.

Conclusions

To preserve a broad range of biodiversity, conservation efforts should focus on preserving dense clusters of wetlands at fine spatial scales to maintain current levels of network connectivity, and restoring connections between clusters to facilitate long-range dispersal of species with limited dispersal capabilities.
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19.

Context

High-resolution animal movement data are becoming increasingly available, yet having a multitude of empirical trajectories alone does not allow us to easily predict animal movement. To answer ecological and evolutionary questions at a population level, quantitative estimates of a species’ potential to link patches or populations are of importance.

Objectives

We introduce an approach that combines movement-informed simulated trajectories with an environment-informed estimate of the trajectories’ plausibility to derive connectivity. Using the example of bar-headed geese we estimated migratory connectivity at a landscape level throughout the annual cycle in their native range.

Methods

We used tracking data of bar-headed geese to develop a multi-state movement model and to estimate temporally explicit habitat suitability within the species’ range. We simulated migratory movements between range fragments, and calculated a measure we called route viability. The results are compared to expectations derived from published literature.

Results

Simulated migrations matched empirical trajectories in key characteristics such as stopover duration. The viability of the simulated trajectories was similar to that of the empirical trajectories. We found that, overall, the migratory connectivity was higher within the breeding than in wintering areas, corroborating previous findings for this species.

Conclusions

We show how empirical tracking data and environmental information can be fused for meaningful predictions of animal movements throughout the year and even outside the spatial range of the available data. Beyond predicting migratory connectivity, our framework will prove useful for modelling ecological processes facilitated by animal movement, such as seed dispersal or disease ecology.
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20.

Context

Methods for measuring restoration success that include functional connectivity between species’ populations are rare in landscape ecology and restoration practices. We developed an approach that analyzes connectivity between populations of target species and their dispersal probabilities to assess restoration success based on easily accessible input data. Applying this method to landscape development scenarios can help optimize restoration planning.

Objectives

We developed an assessment for restoration success and restoration planning based on functional connectivity between species’ populations and spatially explicit scenarios. The method was used in a case study to test its applicability.

Methods

Based on data on available habitat, species’ occurrence and dispersal ranges, connectivity metrics and dispersal probabilities for target species are calculated using the software Conefor Sensinode. The metrics are calculated for scenarios that reflect possible changes in the landscape to provide a basis for future restoration planning. We applied this approach to floodplain meadows along the Upper Rhine for four plant species and three future scenarios.

Results

In the case study, habitats of the target species were poorly connected. Peucedanum officinale and Sanguisorba officinalis were more successful in recolonizing new habitats than Iris spuria and Serratula tinctoria. The scenarios showed that restoration of species-rich grassland was beneficial for dispersal of the target species. As expected in the agriculturally dominated study area, restoration of former arable land significantly increased dispersal probabilities.

Conclusions

In the case study, the developed approach was easily applicable and provided reasonable results. Its implementation will be helpful in decision-making for future restoration planning.
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