Recovery of canopy trees and root collar sprout growth in response to changes in the condition of the parent tree after a fire in a cool-temperate forest

The relationship between the recovery of canopy trees after fire and root collar sprout dynamics was investigated during 1998–2000 in a secondary cool-temperate broad-leaved forest consisting of Quercus mongolica var. grosseserrata and Betula platyphylla var. japonica trees, in northern Hokkaido, Japan, which burned in April 1998. All of the Betula trees that were severely damaged, two-thirds of those slightly damaged, and half of those intact in 1998, died within three growing seasons after the fire. By contrast, half of the Quercus trees that were slightly damaged and half of those severely damaged recovered their foliage, and no slightly damaged or intact trees died during the three growing seasons after the fire. Many Betula trees developed several fruiting bodies of wood-destroying fungi on their stems, irrespective of damage severity. Fungi also infected some of the surviving Quercus, although the crowns tended to recover. Although many sprouting Betula were observed in 1998, the number of sprouts declined rapidly over the study period. Multiple regression analyses showed that the survival and growth of Betula sprouts were positively influenced by the number of sprouts in 1998, damage severity in 1998, and the degree of recover or decline during the study period, and were negatively influenced by parent tree size. On the other hand, a few sprouts of Quercus remained alive. Quercus remained dominant and the dominance of Betula was rapidly reduced after the fire. However, many Betula sprouts remained alive. Stand structure will change drastically for the time being.     

Effects of flooding on the recruitment, damage and mortality of riparian tree species: A field and simulation study on the Rhine floodplain

The extensive flooding by the river Rhine on May 12 1999 provided an opportunity to investigate the impact of such an extreme event in terms of damage and mortality of adult trees in floodplains. Such data is highly valuable for determining the potential impact of climate change on the zonation of tree species along rivers. We analysed an extensive dataset of the damage and mortality suffered by groups of adult trees of the following species as a consequence of this flood: the hardwoods Acer campestre L., Acer platanoides L., Acer pseudoplatanus L., Alnus glutinosa (L.) Gaertn., Carpinus betulus L., Fagus sylvatica L., Fraxinus excelsior L., Juglans nigra L., Prunus avium (L.) L., Quercus robur L., Tilia cordata Mill., Ulmus laevis Pall. and Ulmus minor Miller, and the softwoods Salix spp. L. and Populus spp. L.A logistic survivorship curve revealed that mortality of A. platanoides, A. pseudoplatanus and T. cordata increased significantly with increasing duration of flooding; C. betulus and F. excelsior showed a significant increase of damage and mortality with increasing flooding depth. There was no mortality of Salix spp. and Populus spp. in either the flooded or unflooded areas. No statistically significant relationships were found for the other tree species. Multivariate analysis revealed that flooding duration, flooding depth and flooding velocity explain 19%, 11% and 8%, respectively, of the variation in damage and mortality of trees.The survivorship curves of adult trees obtained in this study were combined with similar curves of saplings based on an earlier study and applied in an individual-tree, process-based simulation model. The simulated effects of flooding on an initial random distribution of trees species on a hypothetical floodplain resulted in a realistic zonation of tree species along the river. When extreme events were simulated, the zonation shifted upward. This demonstrates the model's usefulness in assessment and planning studies of the impacts of climate change on tree species composition in river floodplains in north-west Europe.     

Comparative studies on the fine root status of healthy and declining spruce and beech trees in the Bavarian Alps and occurrence of Phytophthora and Pythium species

Investigations on root and crown status of spruce and beech were carried out on selected trees in the ‘Werdenfelser Land’ area (Bavarian Alps, Southern Germany). In addition, the association of fine root pathogens of the genera Phytophthora and Pythium with the trees’ rhizosphere was studied. In a variety of stands representing various site conditions, soil and root samples were taken from 12 spruce (Picea abies) pairs and eight beech (Fagus sylvatica) pairs. Each pair consisted of a healthy and a declining tree as indicated by crown transparency. The root status was characterized using a set of parameters, and correlations between crown and fine root status were observed. In spruce, most parameters decreased significantly with increasing crown transparency, whereas in beech, correlations were less pronounced. The total number of lateral roots per cm small root (diameter 2–5 mm) was significantly lower in both species for declining trees compared to healthy trees. Pythium spp. were isolated from 15 of 24 soil samples taken from under spruce, and from eight of 16 samples from under beech. Phytophthora citricola was found in two beech stands only. Among the isolated species, Pythium anandrum, Pythium inflatum and Pythium acrogynum were identified according to morphological features. After polymerase chain reaction‐restriction fragment length polymorphism analysis, residual Pythium isolates were assigned to four different groups. No crown transparency‐dependent differences in isolation frequency were found. In soil infestation tests, all species tested caused root damage on both young spruce and beech plants, with P. citricola being the most aggressive pathogen. Additionally, Pythium‐infected beeches showed severe leaf chloroses and necroses. Due to their low isolation frequency, Phytophthora spp. are not considered to play a major role in the decline of spruce and beech in the investigated area. Pythium spp., however, were isolated frequently, showed pathogenicity towards the fine roots of spruce and beech, and are therefore considered to be at least contributing factors in the decline of Bavarian mountain forests.     

Bacteria inhabiting artificially inoculated xylem of Picea abies

Bacteria inhabiting the xylem of Norway spruce (Picea abies (L.) H. Karsten) were investigated. The trees had been wounded and artificially inoculated with fungi and bacteria obtained from wounds of naturally infected spruce. One and five growing seasons after inoculation the Gram‐negative bacterial population present in the stem of inoculated trees were analysed.

The Gram‐negative bacteria isolated from the trees were identified on the basis of morphological, biochemical and physiological tests and whole‐cell fatty acid composition. The predominant strains were Enterobacteriaceae fermenter strains (E. agglomerans or E. sakazakii), fluorescent and yellow pigmented Pseudomonas, Acinetobacter and Moraxella spp. All Gram‐positive bacteria were Bacillus species.

The Gram‐negative bacteria of Norway spruce differed from the Gram‐positive species in possessing stronger lipolytic activity and in their ability to utilize pine resins for growth. Gram‐positive bacteria were generally able to utilise cellulose and hemicellulose, whereas among the Gram‐negative bacteria only one xylanolytic (yellow Pseudomonas) strain was found.     

Biodiversity of endophytic fungi from seven herbaceous medicinal plants of Malnad region,Western Ghats,southern India

A total of 3611 fungal isolates were recovered from 4200 leaf segments incubated from 7 medicinal herbs during monsoon, winter and summer seasons. These fungal isolates belonged to teleomorphic Asco-mycota （23.5%）, anamorphic Ascomycota producing conidiomata （17.4%）, anamorphic Ascomycota without conidiomata （46.9%）, Zygo-mycota （1.42%） and sterile forms （10.6%）. Chaetomium globosum, As-pergillus niger, Aureobasidium pullulans, Curvularia lunata, Fusarium spp., Penicillium spp., Pestalotiopsis spp., Trichoderma viridae, Cladosporium cladosporioides, were frequently isolated from more than one host plant. The number of endophytic isolates was higher in winter than in monsoon and summer seasons.     

Occurrence of Phytophthora species in oak stands in Italy and their association with declining oak trees

Soil‐borne species of Phytophthora were isolated from 19 of 30 examined oak forest areas in Italy. The frequency of isolated Phytophthora spp. (35.2%) was significantly correlated with soil pH and longitude of the sites. Eleven Phytophthora species were detected. Phytophthora cambivora, P. cinnamomi and P. cactorum were recovered from sites in central and southern Italy whereas P. quercina was isolated in the northern and central part of the country. Phytophthora citricola occurred all over Italy. Phytophthora quercina was the only species significantly associated with declining oak trees.     

Temporal evolution of collar lesions associated with ash dieback and the occurrence of Armillaria in Belgian forests

Ash dieback, caused by the fungus Hymenoscyphus fraxineus, has been observed in Europe for several years. In Belgium, the disease was first reported in 2010. Besides crown defoliation and dieback, collar lesions have sometimes been reported. To evaluate the prevalence and the progression of collar lesions and crown defoliation in ash dieback‐affected stands of various ages, a survey was conducted in 2013 and 2014 on 268 ash trees (Fraxinus excelsior) originating from 17 Walloon forest stands. The results showed that the proportion of trees with collar lesions greatly increased between June 2013 and September 2014 and that there appeared to be no significant link between a tree's diameter‐at‐breast height (DBH) and collar lesion occurrence. The mean percentage of defoliation increased in each forest stand across time, with observations conducted in September 2013 and 2014 showing a positive correlation with the mean percentage of trees with collar lesions. Molecular tests were carried out on 103 additional trees originating from 12 of the 17 stands to evaluate the occurrence of H. fraxineus and Armillaria spp. at the collar level. Most of the trees (98%) were infected by H. fraxineus. In contrast, only 41% of the samples were infected with Armillaria spp., most commonly A. gallica and A. cepistipes. This study discusses the role of Armillaria spp. and the rapid increase in the number of trees with collar lesions within the context of the evolution of ash dieback in Europe.     

Mycosphaerella species associated with leaf disease of Eucalyptus globulus in Ethiopia

Eucalyptus spp. are among the most widely planted exotic trees in Ethiopia. Several damaging leaf pathogens are known from Eucalyptus spp. worldwide. Of these, Mycosphaerella spp. are among the most important, causing the disease known as Mycosphaerella leaf disease (MLD). Characteristic symptoms of MLD include leaf spot, premature defoliation, shoot and twig dieback. Recent disease surveys conducted in Ethiopian Eucalyptus plantations have revealed disease symptoms similar to those caused by Mycosphaerella spp. These symptoms were restricted to E. globulus trees growing in several localities in south, south western and western Ethiopia. The aim of this study was to identify the fungi associated with this disease. This was achieved by examining ascospore germination patterns, anamorph associations and sequence data from the Internal Transcribed Spacer (ITS) region of the rRNA operon, for representative isolates. Several different ascospore germination patterns were observed, suggesting that more than one species of Mycosphaerella is responsible for MLD on E. globulus in Ethiopia. Analysis of sequence data showed that three Mycosphaerella spp., M. marksii, M. nubilosa and M. parva were present. This is the first report of these three species from Ethiopia and represents a valuable basis on which to build further studies in the region.     

Riparian forests along small streams on managed forest land in Sweden

This study investigated characteristics of riparian forests on managed forest land in Sweden. Forest and site characteristics were inventoried at three sites, located along a south to north gradient, in 139 transects placed perpendicular to 38 stream reaches (<10?m wide), in forests representing the age classes 0–25, 26–75 and >75 years. Starting from the stream edge, the 30?m long transects were divided into three zones: 0–5, 5–15 and 15–30?m. The stem volumes of Pinus sylvestris L., Picea abies (L.) H. Karst, Betula spp. and broadleaved trees, the basal area share of Alnus spp., the stem density, and Sphagnum spp. coverage all showed an effect of zone (p?P. sylvestris and the highest volumes of P. abies, Betula spp. and broadleaved trees as well as the highest total stem density and basal area share of Alnus spp. Some characteristics of the northernmost site tended to differ from the two sites located in south-central Sweden. Knowledge of the characteristics of riparian forests as found in this study could aid long-term forestry planning and improve precision in the preservation and development of riparian forests with certain qualities.     

ZT、ABA等内源物质与杉木树龄及其组培复壮的关系

对不同树龄的杉木嫩梢及其培养体中ABA、ZT和单宁含量的变化作了分析测定。结果表明:在不同季节ABA和单宁的含量均和树龄呈正相关。三种年龄杉木的嫩梢中ABA含量的年变化趋势基本相同,均以抽梢旺季较低,盛夏季节较高。根据ABA水平,组培材料的采集应在春梢生长旺季进行。采自2、10年生母本的外植体材料,经初代培养后,ZT含量均有明显上升。但在2年生母本培养体中尤为明显。与此同时ABA含量却大幅度下降。经4次继代培养后两种材料中ZT含量均有所下降,且差异缩小。ABA含量却出现回升。它们的消长与嫩梢增殖能力有关。     

Evaluation of tropical forage legumes under Pinus caribaea var hondurensis in Turrialba,Costa Rica

A number of tropical forage legume species were sown in Turrialba., Costa Rica, in plots in the open and under an even cover of Pinus caribaea var hondurensis of basal area 30m²/ha. Mean light level under the trees was 18% full sunlight. After 19 months, species showing good shade tolerance and adaptation to local conditions were: Centrosema spp., Desmodium spp., Flemingia congesta, Galactia striata. Species of poor performance in the shade were: Stylosanthes spp., Indigofera hirsuta, Cajanus cajan, Stilozobium sp.. Canavalia ensiformis, an annual, grew well in the shade, as did Lablab purpureus and Vigna unguiculata. It is suggested that further work be done on the shade tolerant species for eventual use as components of silvopastoral systems. Recommendations are made concerning germplasm collections, evaluation methodology and research for silvopasture development.

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Resumen Se sembraron especies diversas de leguminosas forrajeras en Turrialba, Costa Rica, en parcelas al descubierto y bajo una cobertura uniforme de Pinus caribaea var hondurensis con area basal de 30 m²/ha. El nivel medio de iluminación bajo los pinos era 18% del nivel a pleno sol. Despues de 19 meses las especies que mostraron buena adaptación a la sombra eran: Centrosema spp., Desmodium spp., Flemingia congesta, Galactia striata. Especies de bajo rendimiento en la sombra eran: Stylosanthes spp., Indigofera hirsuta, Cajanus cajan, Stilozobium sp., La planta anuál Canavalia ensiformis creció bien bajo sombra, como tambien lo hicieron Lablab purpureus y Vigna unguiculata. Se sugiere que se investiguen las especies mencionadas como bien adaptadas al sombreamiento para uso en sistemas silvopastoriles. Se presentan recomendaciones sobre colecciones de germoplasma, metodologia de evaluación y investigación para el desarollo de sistemas silvopastoriles.

     

Isolation and identification of endophytic bacteria with plant growth promoting and biocontrol potential from oak trees

Samples of roots, leaves and stems of healthy oak trees were collected from various locations in the Baneh and Marivan regions, Iran. In total, 63 endophytic bacteria were isolated and grouped according to phenotypic properties. Seven selected isolates were further identified by partial sequencing of the 16S rRNA gene. Isolates Pp54, Pp88, Pp95 and Pp177 were Pseudomonas spp., isolates Sm59 and Sm79 were Stenotrophomonas spp., and isolate Bf 172 was a Bacillus sp. The ability of these isolates for plant hormone production such as auxin and gibberellin was evaluated, along with siderophore production, phosphate solubilization, atmospheric nitrogen fixation, protease and hydrogen cyanide production. All strains produced auxin and gibberellin in different amounts. Atmospheric nitrogen fixation ability was positive for strains Sm79, Pp54, Pp88 and Pp95. All strains except Sm79 solubilized phosphate. Strains Sm59, SM79, Pp88, Pp177 and Bf172 produced protease. Pp88, Pp95, Bf172 and Pp177 were able to produce siderophore. Strains Sm79 and Pp95 released low concentrations of hydrogen cyanide. Amongst the strains tested, Pp95, Pp88, Pp177 and Sm79 had different inhibitory effects on the bacterial plant pathogen, Pseudomonas syringae pv. syringae under in vitro conditions. This is the first reported case of endophytic Bacillus, Pseudomonas and Stenotrophomonas strains from oak trees in Iran.     

Inhibition of Armillaria by bacteria isolated from soils of the Boreal Mixedwood Forest of Ontario

Pseudomonas fluorescens, Pseudomonas spp., Bacillus spp., Enterobacter spp., Serratia spp. and Agrobacterium radiobacter were isolated from root-free soils of the Boreal Mixedwood Forest of Ontario a, nd found to be capable of inhibiting the linear growth of Armillaria ostoyae in vitro. Isolates of P. fluorescens, Bacillus spp. and A. radiobacter were the most effective inhibitors of mycelial growth. To test the ability of the bacteria to suppress rhizomorph formation, A. gallica, which produces rhizomorphs in culture more consistently than does A. ostoyae, was used; only a small fraction of P. fluorescens and Bacillus spp. isolates were capable of preventing in vitro rhizomorph formation by A. gallica.     

Genotypic diversity and distribution of Sphaeropsis sapinea within Pinus radiata trees from northern Spain

Sphaeropsis sapinea is an important latent pathogen of Pinus spp., outbreaks of which have a considerable impact on plantations. This study considers the population diversity and distribution of S. sapinea in northern Spain at different spatial scales from single plantations to a wide area covered by Pinus radiata trees. Estimation of genotypic diversity is an important component of the analysis of the genetic structure of plant pathogen populations. Ten simple sequence repeat (SSR) markers were used, together with vegetative compatibility tests, to study the genetic diversity among S. sapinea isolates. Polymorphism analysis at SSR loci is a simple and direct approach for estimating the genetic diversity of S. sapinea isolates. From a total of 86 isolates collected from four different areas, 14 microsatellite haplotypes and 13 vegetative compatibility groups (VCGs) were identified. The percentage of maximum genotypic diversity, based on Stoddart and Taylor's index, for microsatellites of the northern Spain population ranged from 14.6% to 38.1% and from 8.0% to 29.4% for VCGs. Analysis of these markers and vegetative compatibility groups confirmed that S. sapinea reproduces mainly asexually due to its reduced genotypic diversity in spatially close populations. Isolates of S. sapinea from northern Spain populations were predominantly monomorphic at the tested SSR loci. Vegetative compatibility groups also indicate a low level of genetic variability in these samples, which appear to be clonal.     

Fungal root endophytes of Quercus robur subjected to flooding

In August 2011, fungal endophytes were isolated from fine (0.1–0.5 cm diameter) and structural (0.6–2.0 cm) roots from eighteen Q. robur trees at six sites in a Q. robur‐dominated forest displaying symptoms of oak decline. Five sites were subjected to periodic flooding for 3 months in 1997 and 1 month in 2010. Fungal colonization was detected in 94% of 1296 root fragments examined. Fungi representing 126 taxa from Zygomycota (four species), Ascomycota (117 species) and Basidiomycota (five species) were isolated using culture‐based methods and identified by morphotyping and sequencing of the ITS 1 and 2 rDNA. The most frequent eudominants (with colonization frequencies ≥10%) were Aspergillus spp., Cosmospora sp., Ilyonectria radicicola, Pezicula radicicola, Pyrenochaeta cava and six species of Trichoderma. Species composition did not vary greatly between sites, but only 3% of species occurred in all sites. Number of species was higher in roots subjected to floods. Eudominants and dominants present only on flooded sites included Aspergillus spp., Chaetomium globosum, Cosmospora sp., I. radicicola, Sporothrix inflata, Trichoderma harzianum, T. pubescens and T. virens. Structural roots were usually colonized by a higher number of species than fine roots. The majority of species detected belong to Class 2 NC‐endophytes. Pezicula radicicola and Phialocephala fortinii belong to Class 4 NC‐endophytes.     

Conifer seedling root fungi and root dieback in Finnish nurseries

Fungi were isolated from the roots and growth substrate of bare‐rooted and containerized Pinus sylvestris and Picea abies nursery seedlings displaying a root dieback. Isolations were also made from visually healthy seedlings. The potential pathogenicity of all isolated species was determined in laboratory trials.

Cylindrocarpon spp., Fusarium spp. and Trichoderma viride were frequently isolated. The isolation frequency of a uninucleate Rhizoctonia‐like fungus, Pythium spp. and Phytophthora imdulatum from diseased containerized seedlings and their pathogenicity in tests suggest that these fungi are likely involved in the root dieback disease in containers. The pathogenic Rhizoctonia‐like fungus in addition to Pythium spp. was also isolated from bare‐rooted seedlings. In greenhouse tests Pythium spp. were more pathogenic to 4‐week‐old Scots pine seedlings grown before transplantation in unsterile substrate than to those seedlings grown axenically in agar. External factors are considered to have some role in the expression of disease.     

Survival of Ceratocystis fagacearum in branches of trees killed by oak wilt in Minnesota

The survival of Ceratocystis fagacearum in the branches of Quercus ellipsoidalis killed by oak wilt in Minnesota depends on the time of year when the trees die. In trees, which wilt in May or June, the pathogen can be isolated from the xylem for only 1–2 months. In trees which die later in the summer it may persist through to the following spring. Observations on oak bark beetles (Pseudopityophthorus spp.) breeding in the dead trees do not suggest that these beetles are important vectors of the disease in Minnesota.     

Behavior of four broad-leaved tree species used to revegetate eroded granite hill slopes

Information on primary growth behavior after planting is required for mixed-plantation revegetation using broad-leaved species. To estimate primary growth, especially from the perspective of crown coverage and changing growth rates, we examined the growth and survival of four broad-leaved species that are frequently used in erosion-control plantations in Japan. The species studied were Myrica rubra Sieb. et Zucc., Alnus pendula Matsum., Quercus glauca Thunb., and Q. serrata Thunb. The survival, height, and basal diameter of planted trees were measured over a 4-year period, and crown area was calculated over a 3-year period. We found a negative relationship between relative growth rate (RGR) and survival rate, suggesting that fast growth may be fatal when resources are severely limited. The relative height growth rate (RHGR) of A. pendula was especially high during the early period of the study (1997–1999) and then drastically declined, whereas the opposite tendency was observed in Q. glauca. The results of stem allometry analyses conformed to the specific relationships between height growth and diameter growth of the four species; increases in stem thickness based on height increments were smaller in the pioneer species A. pendula. Between-species differences in coverage per planted tree (mean crown area multiplied by survival rate) were small as a result of the negative relationship between coverage area and survival rate.     

Testing of selected South African <Emphasis Type="Italic">Pinus</Emphasis> hybrids and families for tolerance to the pitch canker pathogen, <Emphasis Type="Italic">Fusarium circinatum</Emphasis>

Plantations of Pinus spp. constitute approximately 50% of the South African forestry industry. The first aim of this study was to develop a reliable inoculation technique to screen Pinus spp., for tolerance to infection by F. circinatum, which threatens pine forestry in South Africa. Inoculation of branches was compared with stem inoculations and we considered the number of branches or trees required to obtain statistically significant results. Furthermore, variation in the susceptibility of some Pinus families, clones and hybrids was considered. Results showed that branch inoculations were closely correlated with those from stem inoculations, and that it is important to consider branch and stem diameters when assessing susceptibility of trees. Subsequent trials using branch inoculations showed significant differences in F. circinatum tolerance amongst a range of pine species and hybrids of potential interest to forestry in South Africa. Significant differences in susceptibility were also found among clones of two P. radiata families. The most tolerant trees were P. elliottii × caribaea and P. patula × oocarpa hybrids, while the most susceptible species were P. patula, P. greggii and hybrids of these two. This is the first trial considering the susceptibility of Pinus hybrids, Pinus clones and some P. patula provenances, and the results indicate excellent potential for breeding for tolerance to pitch canker in South Africa. Application The accurate selection of disease tolerant planting stock for the South African forestry industry is crucially important for the continued sustainability of this important industry. The work described here provides valuable information on an artificial inoculation technique that will assist the industry in screening trees for tolerance to the pitch canker fungus, F. circinatum. It also provides some indication of the relative susceptibility of a number of Pinus spp., hybrids and families currently being evaluated in the country.     

Uni- and binucleate Rhizoctonia spp. co-existing on the roots of Norway-spruce seedlings suffering from root dieback

Rhizoctonia fungi were isolated from the roots of 2-year-old nursery-grown Norway-spruce seedlings displaying root-dieback symptoms. The most frequently isolated species, a uninucleate Rhizoctonia sp., was found to co-exist with binucleate Rhizoctonia in the same root system of several seedlings. All the uninucleate isolates anastomosed with each other forming a single anastomosis group with common cultural characteristics. Binucleate Rhizoctonia isolates were divided into several, morphologically dissimilar anastomosis groups (AG-I, R. spp.). In a pathogenicity test under sterile conditions, isolates belonging to the uninucleate Rhizoctonia sp. infected all root regions, particularly the root tips, resulting in a stunted root-system morphology, as was also observed in the isolation material. Binucleate Rhizoctonia spp. colonized only basal root regions, occasionally infecting cortical cells with monilioid hyphae, and had no effect on root growth.