Use of tissue and sediment‐based threshold concentrations of polychlorinated biphenyls (PCBs) to protect juvenile salmonids listed under the US Endangered Species Act

• 1. Under the Endangered Species Act, the National Marine Fisheries Service has authority to protect listed species from any adverse actions that may jeopardize the population's ability to recover and increase to sustainable levels. Listed salmon species in the northwest United States are known to travel through urban areas in their migration from river to ocean. Species such as the chinook salmon (Oncorhynchus tshawytscha) often spend several weeks in these urban estuaries where they can be highly exposed to urban‐related contaminants that reside in the sediments and accumulate in their prey species. The concern is that these contaminants are bioaccumulated to levels that may impact the ability of individual salmon to grow and mature normally. This paper provides a framework for determining the tissue and sediment concentrations of polychlorinated biphenyls (PCBs) that are likely protective against adverse effects in listed salmonid species.
• 2. The relevant ecotoxicological literature was examined and 15 studies were selected that met the pre‐established criteria outlined here. For each study, the lowest tissue concentration (residue) of total PCBs associated with a biological response was selected. The tissue concentration associated with the 10th percentile of these 15 studies was chosen to represent the residue effect threshold (RET) above which wild juvenile salmonids would be expected to exhibit adverse sublethal effects from accumulated PCBs. This value (2.4 μg PCBs g^?1 lipid) is expressed in terms of the lipid‐normalized concentration because of the large effect lipid can have on the expressed toxicity and the substantial variability in lipid content observed in salmonids over their life cycle.
• 3. A sediment concentration that is expected to produce the RET was then determined using the biota‐sediment accumulation factor approach. The sediment effect threshold, which varies with the total organic carbon content in sediment, is the level above which adverse effects may be expected in juvenile salmonids due to accumulation of PCBs from environmental exposure. Bioaccumulation of PCBs was examined in one river system as a model for determining an appropriate bioaccumulation factor for wild juvenile chinook salmon.
• 4. Evaluation of exposure to potentially deleterious concentrations of PCBs based on tissue residues is the preferred approach; however, the sediment effect threshold may also be used in cases where bioaccumulation has been characterized in an estuary. The threshold values presented here are intended as interim guidelines that should be modified as more data become available. Additionally, because of the uncertainty around many of the factors and assumptions that comprise the single threshold effect values, it is recommended that future studies be employed to help determine a range of acceptable values that would afford protection under various environmental and biological conditions.

Published in 2002 by John Wiley & Sons, Ltd.     

Constructed shallow zones along navigation canals: vegetation establishment and change in relation to environmental characteristics

An Erratum has been published for this article in Aquatic Conservation: Marine and Freshwater Ecosystems 12(2), 2002, 251

• 1. In recent decades shallow zones have been constructed along navigation canals in the Netherlands which form a potential new habitat for aquatic macrophytes and helophytes absent from traditional canals.
• 2. The aim of this study was to examine the relationships between the aquatic plant vegetation that becomes established and the physical and chemical characteristics of water and sediment, in order to find the determinants of species composition and the changes therein. Data were collected in 1998 and 1999 from 80 plots in bank zones at varying stages of development since construction along two navigation canals.
• 3. Plots 3–5 years old were partly dominated by rooting submerged macrophytes such as Potamogeton pectinatus, Elodea nuttallii and Potamogeton pusillus; locally non‐rooting species occurred such as Ceratophyllum demersum, Lemna minor and Spirodela polyrhiza. Older plots contained Phragmites australis, locally mixed with free‐floating species. Hydrological isolation from the eutrophic canals was indicated by the presence of Chara vulgaris.
• 4. Characteristics of both water layer and sediment could explain the variation in vegetation composition. Rooting submerged macrophytes predominantly occurred in sites with a thin (<2 cm) layer of sediment with relatively low concentrations of organic matter; moreover, ammonium concentrations in the water layer and sediment pore water were relatively low. Stands of non‐rooting macrophytes and of Phragmites australis were characterized by a relatively thick sediment layer and high ammonium levels in the pore water. Light limitation in turbid water, associated with navigation and eutrophication, may also play a role.
• 5. Although submerged aquatic macrophytes persist for a relatively short time, shallow zones nevertheless function as a habitat for helophyte communities and contribute to a higher aquatic biodiversity than is associated with traditional banks along navigation canals.

Copyright © 2001 John Wiley & Sons, Ltd.     

Introduced northern pike predation on salmonids in southcentral Alaska

Northern pike (Esox lucius) are opportunistic predators that can switch to alternative prey species after preferred prey have declined. This trophic adaptability allows invasive pike to have negative effects on aquatic food webs. In Southcentral Alaska, invasive pike are a substantial concern because they have spread to important spawning and rearing habitat for salmonids and are hypothesised to be responsible for recent salmonid declines. We described the relative importance of salmonids and other prey species to pike diets in the Deshka River and Alexander Creek in Southcentral Alaska. Salmonids were once abundant in both rivers, but they are now rare in Alexander Creek. In the Deshka River, we found that juvenile Chinook salmon (Oncorhynchus tshawytscha) and coho salmon (O. kisutch) dominated pike diets and that small pike consumed more of these salmonids than large pike. In Alexander Creek, pike diets reflected the distribution of spawning salmonids, which decrease with distance upstream. Although salmonids dominated pike diets in the lowest reach of the stream, Arctic lamprey (Lampetra camtschatica) and slimy sculpin (Cottus cognatus) dominated pike diets in the middle and upper reaches. In both rivers, pike density did not influence diet and pike consumed smaller prey items than predicted by their gape‐width. Our data suggest that (1) juvenile salmonids are a dominant prey item for pike, (2) small pike are the primary consumers of juvenile salmonids and (3) pike consume other native fish species when juvenile salmonids are less abundant. Implications of this trophic adaptability are that invasive pike can continue to increase while driving multiple species to low abundance.     

Sediment organic carbon integrates changing environmental conditions to predict benthic assemblages in shallow Arctic seas

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Competitive interactions for food resources between the invasive Amur sleeper (Perccottus glenii) and threatened European mudminnow (Umbra krameri)

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Dinoflagellate cysts in ballast sediments: differences between Canada's east coast,west coast and the Great Lakes

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Foraging mode variation in three stream‐dwelling salmonid fishes

Despite long‐standing interest in foraging modes as an important element of animal space use, few studies document and compare individual foraging mode differences among species and ecological conditions in the wild. We observed and compared foraging modes of 61 wild Arctic charr, Salvelinus alpinus, 42 brown trout, Salmo trutta, and 50 Atlantic salmon, Salmo salar, in their first growing season over a range of habitats in 10 Icelandic streams. We found that although stream salmonids typically sit‐and‐wait to ambush prey from short distances, Arctic charr were more mobile during prey search and prior to prey attack than Atlantic salmon, whereas brown trout were intermediate. In all three species, individuals that were mobile during search were more likely to be moving when initiating attacks on prey, although the strength and the slope of this relationship differed among species. Arctic charr also differed from salmon and trout as more mobile individuals travelled longer distances during prey pursuits. Finally, coupled with published data from the literature, salmonid foraging mobility (both during search and prior to attack) clearly decreased from still water habitats (e.g., brook charr), to slow‐running waters (e.g., Arctic charr) to fast‐running waters (e.g., Atlantic salmon). Hence, our study suggests that foraging mode of young salmonids can vary distinctly among related species and furthers our understanding of the behavioural mechanisms shaping the geographical distribution of wild salmonids.     

Diet composition of the Italian crested newt (Triturus carnifex) in structurally different artificial ponds based on stomach contents and stable isotope analyses

1. In order to evaluate the effects of ecological disturbances, such as climate change, human‐induced habitat modification, or species introduction, and in order to adopt appropriate management policies for their conservation, knowledge of the trophic ecology of protected or threatened species is crucial. The Italian crested newt, Triturus carnifex (Laurenti, 1768), is listed in annexes II and IV of the European Habitats Directive. For this species, changes in water quality and habitat loss represent major threats, potentially impairing its breeding and feeding activities.
2. Artificial aquatic habitats, such as cattle‐drinking pools, represent valuable refuges and suitable breeding sites for T. carnifex. The aim of this study was to determine the food niche of the Italian crested newt in these habitats, evaluating its prey selection strategy in relation to a range of environmental conditions and differing availability of resources. Stomach contents (indicative of short‐term diet) and δ¹³C and δ¹⁵N signatures of tails (indicative of medium‐term diet) of adult newts from three artificial ponds in central Italy, where traditional silvo‐pastoral activities are still important, were determined. Potential prey were also sampled and processed for stable isotope analysis.
3. Triturus carnifex, similar to other newt species, is an opportunistic predator, feeding on a wide variety of prey that includes terrestrial and aquatic macroinvertebrates. In particular, the opportunistic use of temporally available small zooplankton was identified from stomach contents analysis. Conversely, stable isotope analysis highlighted the consumption of larger, soft‐bodied prey that the stomach‐contents‐based approach underestimated. These included terrestrial oligochaetes, which turned out to be the most important and energy‐rich food source in the medium term.
4. These results emphasize the usefulness of combined approaches for studying the trophic ecology of salamanders and also highlight the importance of the integrated management of aquatic breeding habitats and neighbouring terrestrial habitats, as sources of food, for newt conservation.

     

Implications of nutrient enrichment for the conservation and management of seagrass Zostera muelleri meadows

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Natural and anthropogenic drivers of foraging behaviour in bottlenose dolphins: Influence of shellfish aquaculture

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A simple,rapid method for detecting seven common invasive fish species in Europe from environmental DNA

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Effects of tributyltin and hypoxia on the progression of Perkinsus marinus infections and host defence mechanisms in oyster, Crassostrea virginica (Gmelin)

Oysters, Crassostrea virginica (Gmelin), naturally infected by the protozoan parasite Perkinsus marinus in the field were exposed for 6 weeks to tributyltin (TBT), hypoxia, or to both stressors simultaneously. The TBT-exposed oysters continuously bioaccumulated TBT, reaching about 4 mg kg^??1 dry weight by 6 weeks; hypoxic oysters were exposed to water containing an average dissolved oxygen level of about 3 mg L^??1. Untreated control oysters suffered about 30% cumulative mortality by 6 weeks as a result of the progression of their P. marinus infections. The TBT treatment alone produced no additional mortality; however, cumulative mortality in hypoxic oysters was elevated. Mortality among oysters receiving both TBT and hypoxia significantly exceeded that caused by either stressor alone, suggesting a synergistic effect. In an attempt to identify immunotoxicological mechanisms underlying stress-related augmentation of P. marinus infections, defence-related immune functions were measured at 3 and 6 weeks in control and treated oysters. In general, the total number of haemocytes increased as the infections progressed, and the TBT and hypoxic treatments also caused significant additional increments in some samples. However, oxygen-dependent (reactive oxygen species) and oxygen-independent (lysozyme) antimicrobial host defence mechanisms appeared to be largely unaffected by TBT and/or hypoxia. This may be explained by the death of those oysters with marked immunological lesions prior to sampling or by the actual lack of treatment effects.     

Objective classification of Navarro River salmon habitat: a watershed‐based critical habitat case study

• 1. Prevailing freshwater conservation approaches in the USA stem from policy‐based ecosystem management directives, science‐based gap analyses, and legal interpretations of critical habitats. In California, there has been no systematic prioritization of freshwater habitats critical to the persistence of anadromous salmonid populations.
• 2. Anadromous salmonids provide an optimal focal species for conservation prioritization of freshwater habitats in California owing to their flagship, umbrella and keystone status.
• 3. The Navarro River is a key watershed for both Endangered Species Act and Clean Water Act recovery efforts in the state of California. This watershed serves as a case study in the use of iterative discriminant analysis to objectively classify freshwater habitats critical to the persistence of two species of threatened anadromous salmonids, steelhead (Oncorhynchus mykiss) and coho (Oncorhynchus kisutch).
• 4. Riverscape parameters were used initially to define suitable habitat for focal species; subsequent refinement accounted for human disturbance within the watershed. Results from this study identify 22.1 km of riverine habitat critical to the persistence of coho salmon in the Navarro River watershed, which need active conservation or restoration; it also identified an additional 269.4 km of riverine habitat in need of protection for its aquatic habitat values.

Copyright © 2007 John Wiley & Sons, Ltd.     

Interactions of baseflow habitat constraints: Macroinvertebrate drift,stream temperature,and physical habitat for anadromous salmon in the Calapooia River,Oregon

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Tracking change in a human‐dominated landscape: developing conservation guidelines using freshwater fish

• 1. To conserve biodiversity in a human‐dominated landscape, a science‐based inventory and monitoring plan is needed that quantifies existing resources, isolates drivers that maintain natural communities, determines harmful stressors, and links ecological drivers and human stressors. A tactical approach is proposed for conservation planning using freshwater fish at the Cape Cod National Seashore.
• 2. Freshwater fish are well studied and occur across environmental gradients. The lentic systems at the national park are relatively pristine yet are enveloped by a region of high population density. Using fish community data, three steps were taken for tracking anthropogenic impacts in a human dominated landscape. First, fish and potential drivers were sampled intensively along a gradient to determine which fish metrics reflect natural communities and which abiotic and biotic factors structure them. Second, emerging and existing regional human threats were identified. Third, these human threats were linked to the potential drivers that maintain natural communities to identify the most informative metrics to monitor and track change.
• 3. Fish communities, water quality, habitat, and food resources were sampled concurrently in 18 ponds in 1999 and 2000. Three common fish species explained 98% of variation in numbers across systems. Based on ecological relationships, pH, depth, vegetation, prey, and community complexity were determined to maintain biodiversity of freshwater fish communities.
• 4. The primary human threats here included: development‐related, land‐use changes; non‐point source pollution; eutrophication from septic systems; and introduced species that are a byproduct of high human visitation. These are common threats in many rapidly urbanized areas and are likely to have relevance to many sites.
• 5. To track the impact of emerging threats to freshwater ponds related to increased human population, monitoring changes in water quality, vegetated habitat, fish diversity, and trophic interactions are recommended.

Copyright © 2008 John Wiley & Sons, Ltd.     

Catastrophic depletion of reef‐associated sea cucumbers: resource management/reef resilience issues for an Indonesian marine park and the wider Indo‐Pacific

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Nitrogen pollution negatively affects Stratiotes aloides in Central‐Eastern Europe. Implications for translocation actions

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An analysis in support of sediment quality thresholds for polycyclic aromatic hydrocarbons (PAHs) to protect estuarine fish

• 1. Under the US Endangered Species Act and the Essential Fish Habitat provisions of the Sustainable Fisheries Act, it is the responsibility of the National Marine Fisheries Service (NMFS) to safeguard the health of fish in estuarine and coastal waters.
• 2. This includes assessment of the impacts of exposure to toxic chemicals on fish and their critical habitat.
• 3. This analysis was conducted to assist NMFS resource managers in determining when fish are exposed to potentially harmful concentrations of one of the most common environmental contaminants, polycyclic aromatic hydrocarbons (PAHs).
• 4. Effects thresholds were estimated primarily through segmented regression of site‐specific sediment PAH concentrations and associated disease prevalences in a resident fish species, English sole, Pleuronectes vetulus.
• 5. The analyses and supporting data encompass several endpoints, including DNA damage, liver lesions, and impacts on growth and reproduction.
• 6. In general, liver lesion prevalences, DNA adduct levels, and impacts on growth and reproduction were minimal at sediment PAH concentrations at or below 1000 ppb. Above 1000 ppb, there appears to be a substantial increase in the risk of contaminant‐related injury to English sole.

Published in 2002 John Wiley & Sons, Ltd.     

Evaluating the impacts of small impoundments on stream salamanders

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