Length–weight relationships for 21 coastal fish species of the Azores, north-eastern Atlantic

Length–weight relationships were estimated for 21 coastal fish species of the Azores, namely Abudefduf luridus, Bothus podas, Chromis limbata, Coris julis, Diplodus sargus, Echiichthys vipera, Gaidropsarus guttatus, Labrus bergylta, Mullus surmuletus, Phycis phycis, Pomatomus saltator, Sarda sarda, Scorpaena maderensis, Scorpaena notata, Seriola rivoliana, Serranus atricauda, Sparisoma cretense, Sphyraena viridensis, Synodus saurus, Thalassoma pavo and Trachinotus ovatus. Significant length–weight relationships were found for all species. Sexual dimorphism did not affect the length–weight relationships, except in the cases of S. cretense and C. julis. Length–length equations for converting size measurements (standard length (SL) and fork length (FL) to total length (TL)) are also presented for all fish species.     

Linear mixed-effects models for weight–length relationships

Length and weight data are often analyzed in fisheries science to derive a parametric weight–length relationship for estimating biomass and to develop indices of condition for comparing the ‘wellness’ of different populations of fish. However, analysis of such data often ignores the inherent spatial and temporal grouping of the observations, and hence, the data hierarchy. This paper proposes the use of linear mixed-effects models as an effective means of analyzing and comparing weight–length relationships and indices of condition when there are many groups. The use of simple linear regression (where grouping is ignored), ANCOVA (where group effects are incorporated as fixed-effects), and linear mixed-effects models (where group effects are random-effects) are compared using data for Atlantic sea scallops (Placopecten magellanicus). The group means of residuals is proposed as a measure of relative weight or index of population condition. Linear mixed-effects models should be used to analyze grouped data because the variability among groups is ignored in simple linear regression and ANCOVA. Also, it is important that explanatory variables be incorporated in analyses of grouped data because their influence may mask the true differences among groups.     

Diet of demersal fish species in relation to aquaculture development in Scottish sea lochs

The diets of demersal fish, principally haddock (Melanogrammus aeglefinus), whiting (Merlangius merlangus) and several flatfish species, sampled from four Scottish sea lochs (Hourn, Kishorn, Duich and Nevis) which support aquaculture sites, were examined in order to determine whether the impact of aquaculture on benthic biodiversity would affect the diets of demersal fish. Loch Kishorn had the highest maximum planned aquaculture production, loch Nevis follows and lochs Hourn and Duich have the lowest planned production. Samples were collected from locations less than and more than 2000 m from fish farm cages. Fish close to the fish farm cages were on average of greater individual weight than those further away from fish farms. Haddock ate predominantly Malacostracan crustacea, Ophiurid echinoderms and Polychaete annelids; whiting ate predominantly Malacostracan crustacea and teleost fish and flatfish ate Malacostracan crustacea, Polychaete annelids and Ophiurid echinoderms. A small number of saithe sampled had eaten mainly fish farm pellets. Dietary variation in each species was analysed in relation to loch, proximity to aquaculture facilities and fish size. Diet of whiting varied with body size. Dietary differences were observed between the lochs and between sites close to and far from farms in two lochs although these differences cannot be specifically attributed to aquaculture development. Controlling for differences between individual lochs, proximity to aquaculture facilities did not consistently affect diet composition.     

Weight-length relationships for selected fish species of the small-scale demersal fisheries of the south and south-west coast of Portugal

Weight-length relationships were estimated for 31 fish species from the south and south-west coasts of Portugal. These species, which are mainly sea breams (Sparidae), dominate the catches of the main fixed gears used in this region and account for more than 50% and 40% of the total fish landings by weight and by value.     

Using modified length–weight relationships to assess the condition of fish

This paper develops a model to replace classical fish models used to assess weight and condition. Results from two classical models (M=KL³ and M=aL^b) were compared to results from the proposed model (M=BL²H) to find which one could be most accurately applied over the widest range of genetic, morphological and physiological states. A large database of physical measurements was analyzed. The newly proposed model decreased the variability in calculating weight by between 38 and 44% as compared to the conventional fisheries model M=KL³ and was consistently more accurate than M=aL^b. Condition factor K of the two salmon species studied increased with fish weight, while the B factor was generally invariant. With regards to the salmonids, the B factor indicates a type of bodily streamlining, important for swimming functions. A low B factor indicates a fish has less cross sectional area per unit length than a high B value fish has. As well, the B factor can be used to calculate girth. The new model can, therefore, be used to more accurately predict weight and physical state than other conventional models can.     

Long-term patterns of microhabitat use by fish in a southern Appalachian stream from 1983 to 1992: effects of hydrologic period, season and fish length

Abstract— We quantified microhabitat use by members of a southern Appalachian stream fish assemblage over a ten-year period that included both floods and droughts. Our study site (37 m in length) encompassed riffle, run and pool habitats. Previous research indicated that species belonged to either benthic or water-column microhabitat guilds. Most species exhibited non-random microhabitat use in all seasons, and benthic and water column species generally were over-represented in the deeper portions of the site. In addition, water column species generally were over-represented in microhabitats with lower average velocities. The majority of seasonal shifts in microhabitat use were passive (i. e. correlated with changes in microhabitat availability), whereas, most shifts associated with hydrological periods appeared to be active responses to changing environmental conditions. Most species exhibited length-related shifts in microhabitat use, which were strongly affected by hydrologic period for four of ten species. Microhabitat use patterns of assemblage members appeared to be a consequence of species-specific responses to changing environmental conditions. The highly flexible patterns of microhabitat use exhibited by these species necessitate that decisions regarding their management be based on data covering a range of environmental conditions.     

Trophic structure of fish assemblages from Mamoré River floodplain lakes (Bolivia)

Abstract –  The fish assemblage of the floodplain of the Mamoré River (Bolivia) was estimated in eight lakes, corresponding to four habitat types, situated on an environmental gradient related to the river distance: lakes situated near the river, in the forested floodplain, at the floodplain edge and lakes isolated in the savanna. This paper documents the diet of 71 fish species (among the 140 recorded) and compares the taxonomic and trophic structure of fish assemblages between four lake types. The diet analysis was conducted to determine five trophic guilds: algivores/iliophages, herbivores, zooplanktivores, invertivores and piscivores. The taxonomic and trophic structures of the fish assemblages were not similar in the different lake types of the Mamoré River. The trophic structure of assemblages showed a coarse pattern of dominance of algivores/iliophages and invertivores, but different situations were observed in relative abundance of the trophic groups in relation to the spatial position of the lakes (except for piscivores). Lakes close to the river appeared more favourable to the microphages (algivores/iliophages, zooplanktivores) although remote lakes appeared more favourable to the macrophages (invertivores, herbivores). These results support the general idea that fish distribution follows a pattern linked to the ecology of the species, and related to environmental characteristics of the lakes.     

Age–length relationships in UK harbour seals during a period of population decline

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Performance evaluation of rice–fish integration system in rainfed medium land ecosystem

This study was carried out for three successive years during 1999–2001 to evaluate growth and yield performance of fish, prawn and paddy under rice–fish integration system in rainfed medium land ecosystem. Irrespective of stocking density, faster growth rate was recorded for Catla catla followed by Cyprinus carpio, Cirrhinus mrigala, Labeo rohita and Macrobrachium rosenbergii. C. carpio and C. mrigala performed better growth rate against that of L. rohita probably due to the fact that being bottom dwellers, C. carpio and C. mrigala are more tolerant to fluctuation of oxygen concentration. Productivity of fish and prawn was, however, higher (p<0.05) in refuges with 10-cm weir height plots, irrespective of stocking density, while overall yield performance was good at stocking density of 25,000 ha⁻¹. It was observed that, even with supplemental feeding, with increase in stocking density, biomass yield increased up to an optimum and then decreased. An average minimum and maximum yield of 906.6–1282.3 kg ha⁻¹ of fish and prawn has been achieved, which was much higher than the earlier recorded productivity in a season under rice–fish integration system. Highest grain yield was recorded at 15-cm weir height plot (3629 kg ha⁻¹), probably contributed by higher number of panicles per square meter (235.5) and number of filled grains per panicle (121.7). Percentage increase in rice yield under rice–fish integration system was 7.9–8.6% against control, where paddy was cultivated without integration of fish and prawn probably due to better aeration of water, greater tillering effect and additional supply of fertilizer in form of leftover feed and fish excreta. Irrespective of stocking density, the overall rice equivalent yield (REY) of the system was high (4.22–4.55 tons ha⁻¹) at 12.5-cm weir height plots-cum-refuge, without using any pesticide, herbicide, etc.     

Polymerase chain reaction-restriction fragment length polymorphism analysis for species identification of hairtail fish fillets from supermarkets in Japan

Hairtail fillets are marketed as both fresh and frozen forms in retail outlets within Japan. The present study was undertaken to develop a rapid and reliable method for identification of the hairtail species in commercial fillets. A total of 64 fillet samples, caught from various localities within Japan and purchased from various supermarkets, were analyzed. Polymerase chain reaction (PCR) amplification of a portion of the mitochondrial DNA encoding 16S ribosomal RNA gene and subsequent restriction digestion of the amplified products, using Vspl endonuclease, generated different restriction patterns indicating two different species of hairtails in the fillet samples. The results indicated that the commercial hairtail fillets, labeled and marketed as ‘Tachiuo’ in Japan, were comprised of two species of hairtails with Trichiurus japonicus (commonly called Tachiuo) accounting for 47% and Trichiurus sp. 2 (commonly called Tenjikutachi) accounting for 53% of the analyzed samples. This simple and inexpensive PCR-restriction fragment length polymorphism analysis can be routinely applied to determine species composition of hairtails in commercial fillets.     

Efficacy of formalin and povidone–iodine disinfection techniques on the eggs of three marine finfish species

Surface disinfection trials were performed on eggs from three marine finfish species: California yellowtail (CYT; Seriola lalandi), white seabass (WSB; Atractoscion nobilis) and California halibut (HA; Paralichthys californicus). All three species were spawned from captive populations maintained at the Hubbs‐SeaWorld Research Institute (HSWRI). Five disinfection treatments were used for each species; Treatment 1 included 100 mg L^?1 of formalin (F100) for 60 min (current HSWRI treatment), Treatment 2 included 1000 mg L^?1 of formalin for 15 min (F1000), Treatment 3 included povidone–iodine of 50 mg L^?1 for 15 min (PI50), Treatment 4 included povidone‐iodine of 100 mg L^?1 for 10 min (PI100) and Treatment 5 involved a control with no chemical treatment (CONT). For each treatment, the per cent egg hatching rate, per cent survival to first feeding and notochord length at the time of hatching to the nearest 0.1 mm were recorded. Bacteria were also cultured from eggs after treatment to determine the effectiveness of each treatment in reducing the bacterial counts (CFU mL^?1). Treatments F100, F1000 and CONT yielded the highest hatch rates for each species (70–80%), whereas treatments PI50 and PI100 yielded the lowest hatch rates (0–2%). There were no significant differences in survival to first feeding or notochord length, which suggests that the disinfection treatments did not have a negative effect on the yolk sac larvae. The PI50 and PI100 treatments had the lowest bacterial colony counts, showing almost zero bacterial growth. The highest bacterial growth occurred in the F100, F1000 and CONT treatments. Based on the results from this study, the F100 treatment provided the best balance of disinfection and larval health for CYT, WSB and HA.     

Quantifying ichthyofaunal zonation and species richness along a 2800‐km reach of the Rio Chama and Rio Grande (USA)

Abstract – Ichthyofaunal zonation occurs when lotic fishes are partitioned into distinct assemblages, usually in response to longitudinally distributed habitats. Several studies have documented zonation within the Rio Grande, but this is the first to quantitatively test the zonation hypothesis along a continuous 2800‐km river profile, extending from the Rio Chama headwaters to the Gulf of Mexico. Using a large, multi‐source dataset, I detected three ichthyofaunal zones: a high gradient (～1.5%) ‘upper’ zone, a moderate gradient (～0.2%) ‘middle’ zone and a low gradient (<0.1%) ‘lower’ zone. Species richness was lowest in the upper zone and highest in the lower zone, and all zones contained large numbers of nonnative species. However, species richness did not accumulate in a consistent, downstream manner. Instead, it tracked local‐scale changes in mean annual discharge. This demonstrates the strong effect of river regulation and irrigation withdraws on fish diversity in the Rio Grande.     

Otolith–fish size relationship in juvenile gag (Mycteroperca microlepis) of the eastern Gulf of Mexico: a comparison of growth rates between laboratory and field populations

In this study, we conducted experiments on wild-caught juvenile gag Mycteroperca microlepis from the eastern Gulf of Mexico to evaluate the effect of food availability on somatic growth and otolith growth. Juveniles were fed at two different food levels until all fish attained similar sizes. We found that food availability significantly affected growth rates. However, we also found that this manifested itself in differential otolith size. That is, slower-growing gag had larger, heavier otoliths than equal-sized faster-growing gag; an experimental result that has been observed previously among various fish species. We wanted to apply these experimental results to field-caught gag because our initial observations indicated that gag from more southern latitudes along Florida’s west coast were larger than gag from more northern latitudes, at least during the early juvenile period. Applying these relationships to regional field populations, we found that juvenile gag from the more northern latitudes appeared to grow faster than those from southern latitudes, using an otolith–fish size proxy for growth. However, examination of fish length–age relationships revealed that juvenile gag growth rates were not significantly different between regions. These results are contrary to the expectation that larger-sized gag from southern latitudes are growing faster, and suggests that other factors, such as spawning time and habitat quality may explain regional size differences.     

Sequence and polymerase chain reaction–restriction fragment length polymorphism analysis of the large subunit rRNA gene of bivalve: Simple and widely applicable technique for multiple species identification of bivalve larva

ABSTRACT:   One of the biggest and long-standing difficulties in investigation of larval ecology in the field is species-level identification. In the present study, we developed polymerase chain reaction–restriction fragment length polymorphism (PCR-RFLP) analysis based on the large subunit (LSU) rRNA gene (rDNA) D1/D2/D3 region for identification of multiple species of bivalve larvae using 14 species of bivalve collected from Maizuru Bay. The LSU rDNA D1/D2/D3 region of all analyzed species could be amplified by PCR using bvD1f/bvD3r primers, and RFLP analysis by Hae III digestion on the PCR products showed species-specific fragment patterns. Furthermore, this analysis applied to single bivalve larvae in Maizuru Bay revealed efficient amplification of the target region and the species-specific pattern from 80% of the larvae, 75% of which showed a pattern that matched a certain pattern of the adult bivalves. In addition, the analysis of inter- and intraspecies variation of the LSU rDNA D1/D2/D3 region using the sequence data of the genus Crassostrea from the DDBJ database showed high applicability of this RFLP analysis on closely related species. Because of the wide applicability and technical simplicity, this method can become the standard for the identification of bivalve larvae species once the sequence data of the LSU rDNA D1/D2/D3 region of many bivalve species have been accumulated.     

Feeding ecology of dominant demersal fish species <Emphasis Type="Italic">Favonigobius gymnauchen,Repomucenus</Emphasis> spp. and <Emphasis Type="Italic">Tarphops oligolepis</Emphasis> at a sandy beach where larval Japanese flounder settle in the Seto Inland Sea,Japan

ABSTRACT:   Feeding habits of Favonigobius gymnauchen , Repomucenus spp. and Tarphops oligolepis were examined during the period from May to August in 1999, 2000 and 2001 at a sandy beach in the central Seto Inland Sea, Japan. The three species of fish accounted for more than 60% of all fish collected in terms of number of individuals. All three species mainly consumed small crustaceans. However, the major prey of F .  gymnauchen and Repomucenus spp. differed from that of T .  oligolepis . F .  gymnauchen and Repomucenus spp. mainly consumed mysids and small crangonid shrimp (<12 mm in body length), which predominated in the study area. T .  oligolepis actively selected only epifaunal mysids Nipponomysis ornata and avoided crangonid shrimp and gammarids . The frequencies of occurrence of fish in the guts of the three dominant species were very low, and larval and juvenile Japanese flounder were not observed in any of the three fish species. The diet of juvenile Japanese flounder was similar to that of the three species. From these results, it appears that these three fish are competing species for the flounder.