Genetic variation in distant and inbred hybridization progenies from three sympodial bamboo parent species

To achieve germplasm innovation and study genetic variation of important traits of bamboo plants,we used Bambusa multiplex,B.chungii,and Dendrocalamus latiflorus as parent materials for distant and inbred hybridizations.Two hybrid populations and three inbred populations were obtained:two populations consisted of 57 hybrid progenies from B.multiplex 9 B.chungii,26 hybrid progenies from B.multiplex 9 D.latiflorus,and three inbred progenies were from B.multiplex,B.chungii,and D.latiflorus.Traits for growth,morphology,and fiber were examined from the five populations when plants were 3 years old.Two hybrid populations had significant growth advantages in terms of height,diameter at ground level and internodal length.In terms of variability in morphological traits,the two hybrid populations followed the same trend,namely,seven morphological traits showed phenotypes that were intermediate to those of their parents;three morphological traits showed strong maternal effects,and three other morphological traits showed strong paternal effects.Among the five populations,the two hybrid populations had high arithmetic average fiber length,lengthweighted average fiber length and mass-weighted average fiber length,moreover,extensive variations of these three traits were observed within these two hybrid populations.The establishment of distant hybrid populations from these three bamboo species increased the genetic diversity more than in the other species examined.This work provides excellent materials for breeding new varieties and lays the foundation for understanding the genetics of important traits by analyzing related functional genes.     

Genetic variation in relation to adaptability of three mangrove species from the Indian Sundarbans assessed with RAPD and ISSR markers

Rich genetic polymorphism is important for plants to adapt to changes because it enables the plant to make anatomical, physiological and biochemical changes in response to abiotic stress. Geomorphologic characteristics, demographic interference and a cumulative decrease in freshwater influx in the Indian Sundarbans region have proved detrimental to some economically important plants. In this study, genetic polymorphism of three mangrove species, Xylocarpus granatum, Excoecaria agallocha, and Phoenix paludosa, was assessed using RAPD and ISSR molecular markers. X. granatum, already in distress in the Sundarbans, had the least genetic polymorphism, 14.56% in the RAPD analysis and 12.92% in the ISSR. Relatively higher genetic polymorphism was recorded for the profusely growing E. agallocha and P. paludosa: 24.66 and 26.4% in RAPD; 24.87 and 20.32% in ISSR analysis respectively. A UPGMA dendrogram constructed using the similarity matrix from RAPD, ISSR and combined data showed that for X. granatum, the least and highest salinity zones clustered together, whereas for E. agallocha and P. paludosa, higher and lower salinity areas clustered in different clades. Nei’s genetic diversity, calculated from RAPD and ISSR data, was also in accordance with 0.0637 and 0.0583 for X. granatum, respectively, much lower than 0.0794 and 0.0818 for E. agallocha and 0.0799 and 0.0688 for P. paludosa. This opposing degree of polymorphism might be attributed to the profusely growing E. agallocha and P. paludosa and precarious status of X. granatum throughout the Indian Sundarbans.     

Aggressiveness,cultural characteristics and genetic variation of Ceratocystis fimbriata on Eucalyptus spp.

Ceratocystis wilt caused by Ceratocystis fimbriata is currently one of the most important diseases affecting Eucalyptus in Brazil. This disease is controlled by planting resistant clones; however, possible variability in the pathogen population may compromise the selection of resistant genotypes. Therefore, this study aimed to evaluate the aggressiveness of C. fimbriata isolates obtained from Eucalyptus spp, as well as their cultural characteristics and genetic variation of their ITS rDNA gene region. We found a significant isolate × clone interaction, with the isolate RM35 being the most aggressive and presenting a broader spectrum of aggressiveness, causing greater xylem discoloration on a larger number of clones. This isolate is the most suitable for artificial inoculations focusing on the selection of resistant materials. Clones CLR‐236 and CLR‐212 were identified as the most resistant and clones CLR‐223 and CLR‐240 as the most susceptible and those that are recommended as reliable comparators in artificial inoculations. All isolates were morphologically similar and differed from C. fimbriata from sweet potato by the formation of a wide mouth endoconidiophore that produces doliform endoconidia. According to the culture media and temperature applied, the most favourable conditions for mycelial growth were observed using malt extract agar (MEA) and temperatures ranging from 24 to 26°C. There was no correlation between sporulation and aggressiveness. Great variation in ITS sequences was observed, and a total of five ITS genotypes were identified among the ten isolates tested.     

Genetic variation of Prunus cerasoides D. Don,a framework tree species in northern Thailand

Prunus cerasoides D. Don has been identified as an excellent framework tree species for restoring evergreen forest in seasonally dry tropical forestlands. Here we describe the level of microsatellite variation in P. cerasoides trees within and among three National Parks in northern Thailand: Doi Suthep-Pui, Doi Inthanon and Doi Ang Khang, using published primers developed for peach, sweet cherry and sour cherry. The five microsatellite loci employed detected a total of 41 alleles, with the average number of alleles per locus per study site ranging from 2.7 to 8.0 (n = 82). The value of F _ST over the three sites was 0.115, indicating that while the majority of genetic diversity may be contained within sites, they should be considered as genetically distinct. The implications of this for seed collection of this species for forest restoration are discussed.     

Genetic variation in growth and wood-quality traits of Corymbia citriodora subsp. variegata across three sites in south-east Queensland,Australia

Ten growth or wood-quality traits were assessed in three nearby Corymbia citriodora subsp. variegata (CCV) open-pollinated family-within-provenance trials (18 provenances represented by a total of 374 families) to provide information for the development of a breeding program targeting both pulp and solid-wood products. Growth traits (diameter at breast high over bark [DBH], height and conical volume) were assessed at 3 and 7 years of age. Wood-quality traits (density [DEN], Kraft pulp yield [KPY], modulus of elasticity [MoE] and microfibril angle [MfA]) were predicted using near-infrared spectroscopy on wood samples collected from these trials when aged between 10 and 12 years. The high average KPY, DEN and MoE, and low average MfA observed indicates CCV is very suitable for both pulp and timber products. All traits were under moderate to strong genetic control. In across- trials analyses, high (>0.4) heritability estimates were observed for height, DEN, MoE and MfA, while moderate heritability estimates (0.24 to 0.34) were observed for DBH, volume and KPY. Most traits showed very low levels of genotype × site interaction. Estimated age–age genetic correlations for growth traits were strong at both the family (0.97) and provenance (0.99) levels. Relationships among traits (additive genetic correlation estimates) were favourable, with strong and positive estimates between growth traits (0.84 to 0.98), moderate and positive values between growth and wood-quality traits (0.32 to 0.68), moderate and positive between KPY and MoE (0.64), and high and positive between DEN and MoE (0.82). However, negative (but favourable) correlations were detected between MfA and all other evaluated traits (?0.31 to ?0.96). The genetic correlation between the same trait expressed on two different sites, at family level, ranged from 0.24 to 0.42 for growth traits, and from 0.29 to 0.53 for wood traits. Therefore simultaneous genetic improvement of growth and wood property traits in CCV for the target environment in south-east Queensland should be possible, given the moderate to high estimates of heritability and favourable correlations amongst all traits studied, unless genotype × site interactions are greater than was evident.     

Early growth and photosynthetic responses to light in seedlings of three tropical species differing in successional strategies

Containerized seedlings of three commercially important tropical species were grown under four different light treatments [i.e., 100 (open site), 45, 22 and 10% sunlight] for 130 days. Light-saturated photosynthesis (A _max) and light saturation estimates (LSE) reflected the species successional status with Terminalia superba Engl. and Diels, the pioneer species showing largest mean A _max and LSE at 100% sunlight, whereas at 10% sunlight, it showed the lowest A _max and LSE. At 22% sunlight, Cedrela odorata L., an intermediate successional species had greater A _max and LSE than Mansonia altissima A. Chev., a non-pioneer light demander and T. superba. T. superba had the lowest relative growth rate (RGR) at 10% sunlight and greatest net assimilation rate (NAR) at 100% sunlight; although a higher RGR at this light level was not seen for this species. Strong and positive linear mean A _max–mean NAR relationship of C. odorata and T. superba indicated that differences in leaf photosynthetic rates of the two species were reflected in their NAR, which increased with increasing light. At final harvest, superior biomass production was found at 45% sunlight for all the species. Seedling responses in specific leaf area, leaf area ratio, leaf mass ratio and root mass ratio were typically those found along a light gradient. At the 100% sunlight, intrinsic water-use efficiency (WUE), F _v/F _m and final root system of the plants was generally superior in T. superba but at 10% sunlight, WUE was inferior in T. superba when compared to C. odorata and M. altissima, reflecting the respective species’ short-term acclimation to high or low light. Results of this study may have practical use in screening tropical tree species for use in plantation forestry.     

Genetic variation in growth,stem straightness and branch thickness in clonal trials of Acacia auriculiformis at three contrasting sites in Vietnam

Acacia auriculiformis has become an important species in Vietnam because it displays adaptability to a wide range of site conditions and produces pulp wood and sawlogs on short rotations. The aim of this study was to estimate genetic parameters and consider implications for development of clonal forestry. Clonal repeatabilities, genotypic correlations, genotype by environment interactions (G × E), genetic selection gains and correlated responses were estimated for total height (HT), diameter at breast height (DBH), stem volume (VOL), straightness (STR), and branch thickness (BRA) measured in three clonal trials of Acacia auriculiformis A. Cunn. ex Benth. in northern, central and southern Vietnam. Assessments were made at age 1, 2 and 3 years on all three trials and also at age 4 years in one of the trials. The estimates of the genetic parameters were based on a total of 130 clones, of which 115 were selected from a progeny test, and 15 were selected from plantations of the Coen River (Queensland, Australia) provenance in Vietnam. Seventy of these clones were planted in all three trials. The clonal repeatabilities for all studied traits increased with age. The repeatabilities at the latest assessment (3 and 4 years old) of the trials ranged from 0.28 to 0.47 for HT, 0.21–0.56 for DBH, 0.21–0.54 for VOL, 0.21–0.32 for STR, and 0.21–0.28 for BRA. Genotypic coefficients of variation ranged from 8.3 to 13.1% for HT and DBH and from 24.6 to 32.6% for VOL. Age–age genotypic correlations were strong for growth traits but ranged more widely from 0.22 to 0.98 for STR and BRA. Straightness and BRA correlated positively with growth traits, with these correlations ranging from 0.13 to 0.76. Low genotypic correlations between the same traits measured in the different trials at age 3 years indicated that G × E was important for this species in Vietnam. Selection of 10% of the clones resulted in gain varying from 14.3 to 23.0% for HT and DBH. Our results indicate that using HT and DBH as selection traits together with STR and BRA would be beneficial in clonal selection of A. auriculiformis for deployment in Vietnam.     

Plasticity of reproductive allocation of a woody species (Ulex europaeus) in response to variation in resource availability

Context

While many woody perennials grow and reproduce in varying environments, their ability to modify their reproductive allocation under varying resource availability is unclear.

Aims

This study aimed to demonstrate the occurrence of plasticity of reproductive allocation in a pioneer woody species (Ulex europaeus).

Methods

We studied seed production in 144 plants under different irradiance and population densities. We measured their basal area, their whole shoot biomass and photosynthetic biomass, and their reproductive output (number of fruits per individual and number of seeds per fruit).

Results

We found that newly produced photosynthetic biomass was influenced by environmental variation, which in turn determined its reproductive output. In addition, in low light conditions investment in reproduction was more reduced than investment in growth indicating plasticity of reproductive allocation.

Conclusion

These results provide the first evidence for plasticity of reproductive allocation of a woody plant. It may lead to the ability of this pioneer species to survive and to continue to reproduce even at low rates in non-optimal shady habitats and to maintain a non-empty seed bank in forest systems with long unfavourable periods between two disturbances.     

Density-dependent selfing and its effects on seed performance in a tropical canopy tree species, Shorea acuminata (Dipterocarpaceae)

In the conservation and management practices of natural forests, sound reproduction and regeneration form the basis of the maintenance and viability of the tree populations. To obtain and serve biological information for sustainable forest management, we investigated reproductive biology and inbreeding depression in seeds of an important dipterocarp tree species, Shorea acuminata (Dipterocarpaceae), by both field and laboratory experiments. Results of parental analysis of immature and mature seeds showed that selfing rates varied greatly, from 7.6 to 88.4% among eight mother trees, and the mean overall selfing rate was 38.3%. Observed outcrossing events within a 40-ha study plot were predominantly (76.5%) short-distance events with a mating distance (md) ≤ 100 m. Since the selfing rate sharply decreased with increase in the number of flowering conspecifics (i.e., individuals of the same species) within a 100-m radius from the mother trees, the local density of flowering conspecifics appears to be the key factor determining the outcrossing rate in S. acuminata. However, the extremely high selfing rate (88.4%) observed for one tree could not be simply explained by the low local density of flowering conspecifics. Instead, differences in its flowering phenology (its flowering peaked ca. a week earlier than most of the other examined individuals) may have severely limited its receipt of pollen from other conspecifics, and thus promoted selfing. Since there were no significant differences in the proportion of selfed progeny between immature and mature seed stages, there was no evidence of selective abortion of selfed seeds during seed development. However, the seed mass of outcrossed progeny was heavier than that of selfed progeny, and heavier seeds showed higher success rates at germination and seedling establishment. These results suggest that inbreeding depression resulted in reductions in seed mass and may reduce the fitness of selfed seeds in S. acuminata. In addition, the outcrossing rate of S. acuminata was more sensitive to low local conspecific flowering-tree densities than that of a sympatric bee-pollinated dipterocarp species with greater pollination distances. These results suggest that the management of local adult-tree densities is important for avoiding selfing and inbreeding depression in future generations, especially in a species like S. acuminata with predominantly short-distance pollination.     

Allozyme frequencies,outcrossing rate and pollen contamination in Picea abies seed orchards

Allozymes of Swedish seed orchard clones of Norway spruce (Picea abies Karst.) were studied. There were differences between gene frequencies of origins from different regions. The gene pool of the fertilizating pollen of two different orchards was different. Pollen contamination and outcrossing rates were estimated in two seed orchards. The fraction of paternal gametes which did not originate from any seed orchard clone was 10% and 17%, respectively. Based on simulation it was estimated that only a quarter of the gametes with origin outside the orchard would be detected. Estimation of multilocus outcrossing rates were 0.95 and 0.98.     

Genetic variation and ortet/ramet relationships in a clonal test with Picea abies

Eight trees were selected at age eight years from seed in each of 52 full‐sib families of Picea abies and were propagated by rooted cuttings. The parents were both of Norwegian and German origin. Results are presented for the variation in height growth in the progeny test and in the clonal test, for rooting percentages, and for plagiotropic growth. More than 40% of the total variance of rooting percentages is of genetic origin. In the set of crosses between Norwegian and German parents 18% of the clones were classified as plagiotropic, while the same number was 27% in the crosses between Norwegian parents. The plagiotropic growth reduces the correlations between ortets and ramets both at the individual and at the family level. Family information is important in the selection of ortets, and a culling of plagiotropic clones seems necessary to obtain a substantial gain from selection.     

Life strategies in intra-annual dynamics of wood formation: example of three conifer species in a temperate forest in north-east France

We investigated whether timing and rate of growth are related to the life strategies and fitness of three conifer species. Intra-annual dynamics of wood formation, shoot elongation and needle phenology were monitored over 3 years in five Norway spruces (Picea abies (L.) Karst.), five Scots pines (Pinus sylvestris L.) and five silver firs (Abies alba Mill.) grown intermixed. For the three species, the growing season (delimited by cambial activity onset and cessation) lasted about 4 months, while the whole process of wood formation lasted 5-6 months. Needle unfolding and shoot elongation followed the onset of cambial activity and lasted only one-third of the season. Pines exhibited an 'extensive strategy' of cambial activity, with long durations but low growth rates, while firs and spruces adopted an 'intensive strategy' with shorter durations but higher growth rates. We estimated that about 75% of the annual radial increment variability was attributable to the rate of cell production, and only 25% to its duration. Cambial activity rates culminated at the same time for the three species, whereas shoot elongation reached its maximal rate earlier in pines. Results show that species-specific life strategies are recognizable through functional traits of intra-annual growth dynamics. The opposition between Scots pine extensive strategy and silver fir and Norway spruce intensive strategy supports the theory that pioneer species are greater resource expenders and develop riskier life strategies to capture resources, while shade-tolerant species utilize resources more efficiently and develop safer life strategies. Despite different strategies, synchronicity of the maximal rates of cambial activity suggests a strong functional convergence between co-existing conifer species, resulting in head-on competition for resources.     

Variations in root chemistry of three common forest species,southwestern China

Root chemistry varies with tree species and root diameter but little information is available about Tibetan forest species. The root chemistry of three root diameter classes (fine: 0–2 mm, medium: 2–5 mm, coarse: 5–10 mm) of three subalpine species (Abies faxoniana Rehd. and Wild, Picea asperata Mast., and Betula albosinensis Burkill) were investigated. Carbon concentrations, and carbon/nitrogen and carbon/phosphorus ratios increased but nitrogen, phosphorus and nitrogen/phosphorus ratios decreased with increasing root diameter. The roots of the conifers had higher carbon levels, and higher carbon/nitrogen and carbon/phosphorus ratios than birch roots. The opposite was found with nitrogen and phosphorus levels and nitrogen/phosphorus ratios. Lignin concentrations decreased but cellulose concentrations increased with greater root diameters. The results indicate that diameter-associated variations in root chemistry may regulate their contribution to detrital pools which has important implications for below-ground carbon and nutrient cycles in these subalpine forests.     

Genetic variation in Heterobasidion abietinum populations detected with the M13 minisatellite marker

Amplification profiles of the M13 minisatellite core sequence from 47 isolates of Heterobasidion annosum s.l., collected mostly from Abies alba in different European countries, were analysed in comparison with profiles of four isolates of H. annosum s.s. and three isolates of H. parviporum. Genetic variation within and among groups of populations was studied by analysis of molecular variance. A dendrogram constructed with the Neighbor‐Joining method differentiated the three species from each other. Isolates of H. abietinum from Balkan peninsula, Italian peninsula and French Pyrenees each separated into clusters according to geographical origin. Such clear geographic clustering was not detected among isolates from central Europe. The variations between H. abietinum isolates in relation to the migration history of Abies are discussed.     

Comparing needle and shoot phenology with xylem development on three conifer species in Italy

? Since the 1960s biologists have been trying to assess factors affecting cambial activity and latewood formation. A comparison of the phenology of the apical and lateral meristems could add new clues in order to understand mechanisms of the growth dynamic in conifers.

? This study compared needle and shoot growth with xylogenesis in Larix decidua, Pinus cembra and Picea abies during 2001 to verify if cambial resumption occurred after shoot and needle growth had begun, and if latewood initiation occurred when shoot lengthening was complete.

? In pine and spruce, needle and shoot lengthening was synchronous between mid-June and August while larches showed an early development of the needles at the end of May with a later shoot lengthening. Cell production lasted from mid-May to the beginning of August, with the first differentiating cells observed at the end of May, which indicated a earlier reactivation of the cambium with respect to needle and shoot growth.The first latewood cells began wall thickening between July and August, during the termination of needle and shoot lengthening.

? The hypothesis that cambial resumption occurs after shoot and needle elongation was rejected. The separation in time between apical growth and secondary wall thickening of latewood suggested the presence of an internal competition in resource allocation.

     

Genetic variation in height growth curves observed in three clonal tests of sugi (Cryptomeria japonica D. Don) in Kyushu

Genetic variation in the height growth curves was investigated by analyzing data from three clonal trials of sugi (Crytomeria japonica D. Don) in Kyushu. Average height of twelve clones measured at each of five years until 30 years of age were fitted to the Chapman-Richards function with two parameters model. Clonal variation in the two parameters (an upper asymptote and a rate of growth parameter) was statistically significant across the tests, indicating that height growth pattern is under genetic control. The type of growth curve was clearly classified with the two parameters and agreed with the empirical classifications of the growth habit of local varieties. The rate of growth parameter was correlated with total height up to 20 years of age, while the upper asymptote was correlated only with the last ten years’ increment from 21 to 30 years where the clonal repeatability was decreasing. This indicates that a clonal selection for long rotation management system would not be reliable unless the height is measured accurately with more advanced devices or it is adjusted by the current increment of diameter.     

Genetic variation, mating patterns and gene flow in a Pinus pinaster Aiton clonal seed orchard

? Relatedness among parents, variation in clonal fertility and background pollination deviate the realized genetic gain and the gene diversity of open pollinated seed orchard from expectation, in particular in wind pollinated species such as Pinus pinaster Aiton.

? This work investigates the genetic variation, the mating system and the pollen contamination in a P. pinaster clonal seed orchard (CSO), by screening the 60 clones from the CSO and the seeds collected from 21 mother-trees with three nuclear microsatellites.

? The expected diversity was similar, but the observed heterozygosity decreased 20% in the progenies compared with the parental trees. The outcrossing rate was 90.1%, the biparental inbreeding 21.7% computed through a multilocus approach, and the observed selfing 3.9%. The observed gene flow from outside the CSO was 52.4%.

? From the results we concluded that the observed gene flow and the biparental inbreeding were high, and care should be taken in the implementation and management of future CSO, in particular clones should be checked for relatedness and the ramet number could be directly proportional to their breeding value.

     

Genetic variation for carbon isotope composition in Juglans regia L.: relationships with growth, phenology and climate of origin

? Among the traits of breeding interest for the common walnut tree Juglans regia L., characteristics such as timing of budbreak and leaf fall, water-use efficiency and growth performance are regarded as being of utmost relevance in Mediterranean conditions.

? The authors evaluated intraspecific variation in δ¹³C (carbon isotope composition, surrogate of intrinsic water-use efficiency, WUE_i) for 22 J. regia families grown in a progeny test under supplementary irrigation, and investigated whether such variation correlated with climatic indicators of native habitats. The genetic relationships between δ¹³C, growth and phenology were also assessed during two consecutive years.

? Overall, the most water-use-efficient families (i.e. with higher δ¹³C), which originated mainly from drought-prone provenance regions which have a high vapour pressure deficit and low rainfall, exhibited less height growth and smaller DBH. Using a stepwise regression procedure, δ¹³C was included as the main explanatory variable of genotypic variation in growth traits, together with growing season duration (for DBH in both years) and flushing (for height in 2007).

? It was concluded that WUE_i is largely unconnected to phenology effects in the explanation of growth performance for J. regia, therefore suggesting the opportunity of simultaneously selecting for low WUE_i and extended growing period to maximise productivity in non-water-limited environments.