Arsenic and heavy metal accumulation by Athyrium yokoscense from contaminated soils

Abstract

Athyrium yokoscense, a type of fern that grows vigorously in mining areas in Japan, is well known as a Cd hyperaccumulator as well as a Cu, Pb and Zn tolerant plant. However, no information is available on As accumulation of A. yokoscense, although it often grows on soils containing high levels of both heavy metals and As. In this study, young ferns collected from a mine area were grown in media containing As-spiked soils or mine soil in a greenhouse for 21 weeks. Athyrium yokosense was highly tolerant to arsenate and survived in soils containing up to 500 mg As (V) kg^?1. The addition of 100 mg As (V) kg^?1 resulted in the highest fern biomass (1.95 g plant^?1) among As-spiked soils. Although the As concentration of the fern was lower than other As hyperaccumulators, such as Pteris vittata, A. yokoscense could hyperaccumulate As in mature and old fronds. Arsenic was accumulated most efficiently in old fronds (922 mg kg^?1) in the media containing 5 mg As (III) kg^?1. Moreover, higher As accumulation was found in the roots of the ferns, with a range from 506 to 2,192 mg kg^?1. In addition, in the mine soil with elevated concentrations of As and heavy metals, A. yokoscense not only hyperaccumulated As (242 mg As kg^?1 in old fronds), but also accumulated Cd, Pb, Cu and Zn at concentrations much higher than those reported for other terrestrial plants. Athyrium yokoscense accumulated Cd mostly in fronds in high concentrations, up to 1095 mg kg^?1, while it accumulated Cu, Zn and Pb mainly in the roots and the concentrations were 375, 2040 and 1165 mg kg^?1, respectively.     

Chelate-enhanced phytoextraction and phytostabilization of lead-contaminated soils by carrot (Daucus carota)

The objective of this study was to study the influence of different ethylenediamine tetraacetate (EDTA), nitrilotriacetic acid (NTA) and oxalic acid (HOx) concentrations on tolerance and lead (Pb) accumulation capacity of carrot (Daucus carota). The results indicated that by increasing Pb, NTA and HOx concentrations in the soil, the shoot, taproot and capillary root dry matters increase effectively. In contrary, EDTA caused to reduce capillary roots biomass. EDTA was more effective than NTA and HOx in solubilizing soil Pb. The highest Pb content in shoots (342.2 ± 13.9 mg kg^?1) and taproots (301 ± 15.5 mg kg^?1) occurred in 10 mM EDTA, while it occurred for capillary roots (1620 ± 24.6 mg kg^?1) in 5 mM HOx, when the soil Pb concentration was 800 mg kg^?1. The obtained high phytoextraction and phytostabilization potentials were 1208 (±25.6) and 11.75 (±0.32) g Pb ha^?1 yr^?1 in 10 mmol EDTA kg^?1 soil and no chelate treatments, respectively. It may be concluded that chelate application increases Pb uptake by carrots. Consequently, this plant can be introduced as a hyperaccumulator to phytoextract and phytostabilize Pb from contaminated soils.     

Build-up of carbon fractions in technosol-biochar amended partially reclaimed mine soil grown with <Emphasis Type="Italic">Brassica juncea</Emphasis>

Purpose

Soil organic carbon (SOC) and its labile fractions are strong determinants of physical, chemical and biological properties. The objective of the present work was to evaluate the effects of organic amendments (technosol made of wastes and biochar) and Brassica juncea L. on the soil C fractions in a reclaimed mine soil.

Materials and methods

The studied soil was from a former copper mine that was subsequently partially reclaimed with vegetation and wastes. A greenhouse experiment was carried out to amend the mine soil with different proportions of technosol and biochar mixture and planting B. juncea. B. juncea plants can tolerate high levels of metals and can produce a large amount of biomass in relatively short periods of time.

Results and discussion

The results showed that with the addition of biochar and wastes, soil pH increased from 2.7 to 6.18, SOC from undetectable to 105 g kg^?1 and soil total nitrogen (TN) from undetectable to 11.4 g kg^?1. Amending with wastes and biochar also increased dissolved organic carbon (DOC) from undetectable to 5.82 g kg^?1, carbon in the free organic matter (FOM) from undetectable to 30.42 g kg^?1, FAP (carbon in fulvic acids removed with phosphoric acid) from undetectable to 24.14 g kg^?1 and also increased the humification ratio, the humification index, the polymerisation rate and the organic carbon in the humified fractions (humic acids, fulvic acids and humin). Soils amended and vegetated with B. juncea showed lower FOM values and higher humification index values than the soils amended only with biochar and wastes.

Conclusions

This study concludes that the combined addition of wastes and biochar has a greater potential for both increasing and improving organic carbon fractions in mine soils. The authors recommend the application of biochar and technosol made of wastes as a soil amendment combined with B. juncea on soils that are deficient in organic matter, since they increased all of the SOC fractions in the studied copper mine soil.

     

Manure application has an effect on the carbon budget of a managed grassland in southern Hokkaido,Japan

Abstract

The carbon (C) budget of managed grassland in a cool-temperate region of Japan was estimated using a combination of eddy covariance and the biometric method for five years, to evaluate the effect of manure application. Chemical fertilizer was applied to the fertilizer (F) plot at a rate of 79 ± 20 kg N ha^?1 yr^?1. In the manure (M) plot, dairy cattle manure was applied at a rate of 10 Mg fresh matter ha^?1 yr^?1 (1923 ± 407 kg C ha^?1 yr^?1, 159 ± 68 kg N ha^?1 yr^?1). There was no significant difference in seasonal gross primary production (GPP) and harvest between the treatment plots, indicating that both fertilizer and manure can increase the biomass production. Annual net ecosystem production (NEP) and ecosystem respiration (RE) was significantly different between the treatment plots. The difference in RE, and between M and F plots approximates heterotrophic respiration of manure (RHm), which ranged from 0.9 to 1.3 Mg C ha^?1 yr^?1. Average annual RHm was 1.1 ± 0.4 Mg C ha^?1 yr^?1, and accounted for 56% of the total amount of applied manure C. The annual net biome production (NBP) in the M plot (from 0.0 to 1.5 Mg C ha^?1 yr^?1) was significantly higher than in the F plot (?1.4 to 0.5 Mg C ha^?1 yr^?1). The long-term effect of manure application combined with chemical fertilizer did not reduce grass production compared with chemical fertilizer only; however, manure application decreased the NEP throughout manure decomposition, and long-term manure application enhanced the NBP.     

Organic Matter Influence in Cadmium Uptake by Sorghum

Abstract

The influence of soil organic matter (OM) in the uptake of cadmium (Cd) by Sorghum will be studied in order to get a better knowledge in the yield and understanding of detoxification mechanisms of soils. Plants were grown for 60 days in a greenhouse pot experiment using a contaminated soil with 4.5 and 35 mg Cd kg^?1, in absence and presence of OM. An Irish peat moss (70 g kg^?1 of soil) was added as OM. In the presence of OM the biomass production of root and shoot was increased with a positive correlation between biomass increment and contamination level. For experiments with 35 mg Cd kg^?1 of soil the biomass production was increased of about 7 times in the presence (vs. absence) of OM. Although the presence of OM had decreased Cd root concentration by decreasing Cd bioavailability in soil, the increase of biomass in presence of OM led to an increase of about 3 times on the Cd amount in shoot, result that can be important in soil phytoremediation.     

Characterization of the Soil Organic Matter in Agricultural Mine Spoils and Reclaimed Soils Treated with Organic Amendments

Recycling organic waste in agricultural soils is a valid solution. We performed short‐term experiments to investigate the fate of urban sludge and composts, in mine spoils, cultivated or uncultivated, and reclaimed soils located in Florence and Milan, Italy. The samples, either treated or untreated, were fractionated by density into light (<1.63 Mg m^?3) and heavy (>1.63 Mg m^?3) fractions. The fractions were analyzed for total carbon (C) and nitrogen (N) contents and for δ ¹³C and δ ¹⁵N isotopes, and they were characterized by ¹³C NMR spectroscopy. Treatment increased the heavy fraction. The addition of sludge in the Florence area acts in synergy with the cultivation, increasing the light fraction (LF). In the Milan area, the LF tends to be decomposed and apparently transformed into HF. The addition of amendments or cultivation enhances the decomposition with release of carbon dioxide. For future research, we suggest lengthening the time of the experiments to integrate climatic variations.     

Laboratory Assessment of Nostoc 9v (Cyanobacteria) Effects on N2 Fixation and Chemical Fertility of Degraded African Soils

The potential of Nostoc 9v for improving the nitrogen (N)₂–fixing capacity and nutrient status of semi‐arid soils from Tanzania, Zimbabwe, and South Africa was studied in a laboratory experiment. Nostoc 9v was inoculated on nonsterilized and sterilized soils. Inoculum rates were 2.5 mg dry biomass g^?1 soil and 5 mg dry biomass g^?1 soil. The soils were incubated for 3 months at 27 °C under 22 W m² illumination with a photoperiod of 16 h light and 8 h dark. The moisture was maintained at 60% of field capacity. In all soils, Nostoc 9v proliferated and colonized the soil surfaces very quickly and was tolerant to acidity and low nutrient availability. Cyanobacteria promoted soil N₂ fixation and had a pronounced effect on total soil organic carbon (SOC), which increased by 30–100%. Total N also increased, but the enrichment was, in most soils, comparatively lower than for carbon (C). Nitrate and ammonium concentrations, in contrast, decreased in all the soils studied. Increases in the concentration of available macronutrients were produced in most soils and treatments, ranging from 3 to 20 mg phosphorus (P) kg^?1 soil, from 5 to 58 mg potassium (K) kg^?1 soil, from 4 to 285 mg calcium (Ca) kg^?1, and from 12 to 90 mg magnesium (Mg) kg^?1 soil. Positive effects on the levels of available manganese (Mn) and zinc (Zn) were also observed.     

Crop production impacts on soil phosphorus removal and soil test levels

An 8-year field study documented the impact of tillage, crop rotations, and crop residue management on agronomic and soil parameters at Brookings, South Dakota. The greatest annual proportion of above-ground biomass phosphorus (P) removed was from the grain (78–87% of total) although crop residue removed some P as well. Greater above-ground total biomass P (grain P + crop residue P) was removed from corn than from soybean and spring wheat crops mainly due to the greater corn grain biomass harvested. Cumulative above-ground biomass P removal was greatest for the corn-soybean rotation (214 kg P ha^?1), while it was lowest for the soybean-wheat rotation (157 kg P ha^?1). Tillage treatments within crop rotation or residue management treatments did not influence annual or cumulative P removal rates. Olsen extractable soil orthophosphate-P levels declined consistently through time from a mean of 40 µg g^?1 (2004) to 26 µg g^?1 (2011). Biomass P removal was calculated to be 15.7 ha^?1 yr^?1 to decrease Olsen extractable soil orthophosphate-P levels by 1 µg g^?1 yr^?1 over 8 years of the study.     

Fine-Root Production and Aboveground Development for Loblolly Pine,Silver Maple,and Cottonwood

Fine-root production was studied in recently established loblolly pine (Pinus taeda), silver maple (Acer saccharinum), and cottonwood (Populus deltoides) biomass plantations. Dry weights of fine roots produced in ingrowth cores were recorded from April 2008 to March 2009 to quantify the temporal variation of fine-root production among the species. Similarly, fine-root production was compared to the monthly height and diameter increments, soil temperature, and moisture content. Species showed no significant difference in fine-root production; however, fine-root production varied by month. Fine-root production in September was significantly different from that of December and January combined, February, and May. Loblolly pine produced 49 g m^?2, whereas silver maple and cottonwood produced 37 g m^?2 and 35 g m^?2 of fine roots, respectively, during the study period. Fine-root production was not correlated with height increment, diameter increment, soil temperature, and soil moisture.     

Evaluation of Pb Phytoremediation Potential in Buddleja asiatica and B. paniculata

The phytoremediation potential for Pb of Buddleja asiatica (a wild species) and a closely related cultivated species, B. paniculata, was investigated by means of field survey, hydroponic and pot experiments, and field trial experiments. Field surveys showed that B. asiatica had an extraordinary accumulation capacity and tolerance for Pb. Plants grown in soil with 2,369.8–206,152 mg kg^?1 total Pb accumulated 1,835.5–4,335.8 mg kg^?1 Pb in their shoots. Under hydroponic conditions (10, 20 mg l^?1 Pb), both B. asiatica and B. paniculata showed unusually high concentrations of Pb in their roots (12,133–21,667 mg kg^?1) and increased biomass production. A pot experiment in a greenhouse without any soil amendments was conducted on three different soils with various Pb contents (10,652, 31,304, 89,083 mg kg^?1) for 3 months. The results showed that both species of Buddleja had an increase in the biomass similar to the control plants. There was a slight decrease in survival rates of plants grown in soil with 89,083 mg kg^?1 Pb content. A field trial experiment was conducted for 6 months at three sites around the Pb mine area in which plants were provided with Osmocote fertilizer. Both Buddleja species showed 100% survival, increased biomass production and phytoextraction capacity (TF 1.1–2.3) when grown in soil with Pb content of 94,584–101,405 mg kg^?1. Plants accumulated 2,273–3,675 mg kg^?1 Pb in their shoots. The results suggest these Buddleja plants are suitable for use in the phytoremediation of Pb-contaminated soil.     

Gross N transfer rates in field soils measured by 15N-pool dilution

Abstract

A micro-plot ¹⁵N-tracer experiment was established in three different soils of a long-term soil fertility field experiment. The nutrient-poor loam sand has been subjected to various treatments over the years and this has resulted in different organic C (0.35% – 0.86%), microbial biomass (38.3 – 100.0 µg C _mic g^?1 soil), clay and fine silt contents. Using the ¹⁵N-pool dilution technique, we assessed gross N-transfer rates in the field. Gross N mineralization rates varied strongly among the three plots and ranged between 0.4 and 4.2 µg N g^?1 soil d^?1. Gross nitrification rates were estimated to be between 0 and 2.1 µg N g^?1 soil d^?1. No correlation between gross N mineralization rates and the organic matter content of the soils was established. However, gross nitrate consumption rates increased with increasing soil C content. The ¹⁵N-pool dilution technique was successfully used to measure gross N transfer rates directly in the field.     

Tillage Effects on Particulate and Mineral‐Associated Organic Matter in Two Tropical Brazilian Soils

Abstract

Two Ferralsols (350 and 600 g kg^?1 clay) from the Brazilian Cerrado Region were evaluated for long‐term effects (5 and 8 years) of no tillage on carbon (C) stocks in particulate (>53 µm) and mineral‐associated (<53 µm) soil organic matter (SOM) fractions. Carbon stocks in particulate SOM increased under no tillage compared with conventional tillage, and the rate was higher in the clayey soil (0.62 Mg C ha^?1 yr^?1) than in the sandy clay loam soil (0.31 Mg C ha^?1 yr^?1). In contrast, the mineral‐associated SOM in the top soil layer (0–20 cm) was not affected by tillage system. Sequestration of atmospheric C in tropical no‐tillage soils seems to be due to accumulation of C in labile SOM fractions, with highest rates in clayey soils probably due to physical protection.     

Nitrification Inhibition in Iowa Soils Treated with Stay‐N 2000 as Affected by Temperature and Matric Potential

The effects of temperature and water potential on nitrification were investigated in two Iowa soils treated with Stay‐N 2000. The soils were incubated at 10, 20, and 30 °C after soil water potentials of ?1, ?10, or ?60 kPa were applied to each soil. A first‐order equation was used to calculate the maximum nitrification rate (K _max), duration of lag period (t′), period of maximum nitrification (Δt), and termination period of nitrification (t _s). The highest K _max were 18 and 24 mg kg^?1 d^?1 nitrate (NO₃ ^?)–nitrogen (N), respectively, at 30 °C and ?10 kPa in both the Nicollet (fine‐loamy, mixed, superactive, mesic Aquic Hapludoll) and Canisteo (fine‐loamy, mixed, superactive, calcareous, mesic Typic Endoaquoll) soils and reduced to 4 and 16 mg kg^?1 d^?1 NO₃ ^?‐N when Stay‐N 2000 was added. The extension of t′ due to the addition of Stay‐N 2000 was as high as 7 d in the Nicollet soil at 10 °C and ?1 kPa and as little as 2 d in the Canisteo soil at 20 °C and ?10 kPa.     

Effect of soybean inoculation with Bradyrhizobium and wheat inoculation with Azotobacter on their productivity and N turnover in a Vertisol

A long-term field experiment was conducted for 8 years on a Vertisol in central India to assess quantitatively the direct and residual N effects of soybean inoculation with Bradyrhizobium and wheat inoculation with Azotobacter in a soybean–wheat rotation. After cultivation of soybean each year, its aerial residues were removed before growing wheat in the same plots using four N levels (120, 90, 60 and 30 kg ha^?1) and Azotobacter inoculation. Inoculation of soybean increased grain yield by 10.1% (180 kg ha^?1), but the increase in wheat yields with inoculation was only marginal (5.6%; 278 kg ha^?1). There was always a positive balance of soil N after soybean harvest; an average of +28 kg N ha^?1 yr^?1 in control (nodulated by native rhizobia) plots compared with +41 kg N ha^?1 yr^?1 in Rhizobium-inoculated plots. Residual and direct effects of Rhizobium and Azotobacter inoculants caused a fertilizer N credit of 30 kg ha^?1 in wheat. Application of fertilizers or microbial inoculation favoured the proliferation of rhizobia in crop rhizosphere due to better plant growth. Additional N uptake by inoculation was 14.9 kg N ha^?1 by soybean and 20.9 kg N ha^?1 by wheat crop, and a gain of +38.0 kg N ha^?1 yr^?1 to the 0–15 cm soil layer was measured after harvest of wheat. So, total N contribution to crops and soil due to the inoculants was 73.8 kg N ha^?1 yr^?1 after one soybean–wheat rotation. There was a total N benefit of 13.8 kg N ha^?1 yr^?1 to the soil due to regular long-term use of microbial inoculants in soybean–wheat rotation.     

Adequacy of contrasting sampling methods for root mass quantification in a slash-and-burn agroecosystem in the eastern periphery of Amazonia

Root research needs to optimize sampling schemes to address different scales and dimensions of variability within a framework of feasible effort and, in some cases, acceptable soil perturbation. Both large and small sample volumes are utilized in root research, and this study is designed to help field researchers in optimizing root sampling. We evaluate the performance of three contrasting sampling strategies—large monoliths (LM, 25 dm^?3), small monoliths (SM, 3?×?1 dm^?3), and root auger (RA, 5?×?196.3 cm^?3). We compare root biomass estimates obtained in a shifting cultivation agroecosystem in eastern Amazonia. We sampled a slash-and-burn field at 1/2 and 1 1/2 years of cultivation, and a paired 3-year-old spontaneous secondary forest regrowth down to 1 m soil depth, and we distinguish roots by diameter class and taxonomic origin (palm vs. non-palm roots). LMs are the only reliable quantification method for coarse roots. Both SM and RA methods are inadequate due to high variability and the frequent failure to detect the presence of coarse roots in the sampled soil. The SM method is acceptable for mid-sized (2–5 mm) roots, and both methods are adequate for fine root (<2 mm) quantification. Labor costs of LM, SM and RA methods are similar since reduced sampling effort in small sample volumes is compensated by increased costs in sample handling. The small sample volumes of SM or RA may be preferable in situations focusing on fine root dynamics, with the necessity to avoid major perturbations, or in repeated sampling schemes. Both SM and RA samplings gave a strong and systematic overestimation of root biomass in all fractions compared to the LM values, with differences being less pronounced for SM. We establish comparability between the three sampling schemes with transformation equations which are remarkably similar between shifting cultivation and secondary forest, between roots of the babassu palm and those of other origin and down the 1-m soil profile. Thus, future field studies in similar environments can utilize SM or RA fine root sampling and subsequently transform data to LM estimates. We recommend the SM rather than the RA method because of the lower data variability and the lower degree of root mass overestimation.     

Nitrogen flow on an organically managed beef farm in Hokkaido,Japan

Nutrient recycling should be effective at balancing nutrient flows in Japanese animal production. This means replacing imported feed with self-produced feed. The Yakumo Experimental Farm of Kitasato University has produced commercial beef under ‘organic’ management, without the use of agricultural chemicals or imported feed, since 2005. Using a data set obtained from 220 ha of grassland and 250 head of cattle over the 5 years from 2008 to 2012, we estimated nitrogen (N) flow. During 2011 and 2012, we measured grass production, cattle production (selling out), soil parameters and atmospheric deposition (from precipitation and atmospheric ammonia concentrations). To determine N fixation by clover (white clover, Trifolium repens L.), we compared grass + clover plots with grass-only plots. Averaged over the period, N components on the 220 ha of grassland comprised 1952 Mg soil N stock, 3.2 Mg N yr^?1 in living livestock, 14.3 Mg N yr^?1 uptake by grass growth (including 8.6 Mg yr^?1 of N fixed by clover), 15.7 Mg N yr^?1 applied in composted manure, 1.7 Mg N yr^?1 in imported bedding material, 2.8 Mg N yr^?1 in deposition and 1.41 Mg N yr^?1 in meat production. N in composted manure equaled about 0.8% of the huge soil N stock; N in grass production equaled about 0.7%, of which clover fixation supplied 60%; N deposition was not negligible; and N export by meat production was minor. These results show that on this organically managed farm, soil N stock increased gradually (by 8.6 Mg N yr^?1 [220 ha]^?1 = 39 kg N ha^?1 yr^?1 = 0.02% of the soil N stock) and N export was small. Our findings show that it is possible to balance N inputs with N outputs in a beef cattle enterprise without the need for feed or fertilizer imports.     

Carbon sequestration potential of hydrothermal carbonization char (hydrochar) in two contrasting soils; results of a 1-year field study

Soil amendment with hydrochar produced by hydrothermal carbonization of biomass is suggested as a simple, cheap, and effective method for increasing soil C. We traced C derived from corn silage hydrochar (δ¹³C of ?13?‰) added to “coarse” and “fine” textured soils (δ¹³C of ?27?‰ for native soil C (SOC)) over two cropping seasons. Respiration rates increased in both soils (p?<?0.001) following hydrochar addition, and most of this extra respiration was derived from hydrochar C. Dissolved losses accounted for ~5 % of added hydrochar C (p?<?0.001). After 1 year, 33?±?8 % of the added hydrochar C was lost from both soils. Decomposition rates for the roughly two thirds of hydrochar that remained were very low, with half-life for less estimated at 19 years. In addition, hydrochar-amended soils preserved 15?±?4 % more native SOC compared to controls (negative priming). Hydrochar negatively affected plant height (p?<?0.01) and biomass (p?<?0.05) in the first but not the second crop grown on both soils. Our results confirm previous laboratory studies showing that initially, hydrochar decomposes rapidly and limits plant growth. However, the negative priming effect and persistence of added hydrochar C after 1 year highlight its soil C sequestration potential, at least on decadal timescales.     

SUSTAINABLE NUTRIENT MANAGEMENT PACKAGE FOR COST-EFFECTIVE BIOENERGY BIOMASS PRODUCTION

Commercial fertilizer (particularly nitrogen) costs account for a substantial portion of the total production costs of cellulosic biomass and can be a major obstacle to biofuel production. In a series of greenhouse studies, we evaluated the feasibility of co-applying Gibberellins (GA) and reduced nitrogen (N) rates to produce a bioenergy crop less expensively. In a preliminary study, we determined the minimum combined application rates of GA and N required for efficient biomass (sweet sorghum, Sorghum bicolor) production. Co-application of 75 kg ha^?1 (one-half of the recommended N rate for sorghum) and a modest GA rate of 3 g ha^?1 optimized dry matter yield (DMY) and N and phosphorus (P) uptake efficiencies, resulting in a reduction of N and P leaching. Organic nutrient sources such as manures and biosolids can be substituted for commercial N fertilizers (and incidentally supply P) to further reduce the cost of nutrient supply for biomass production. Based on the results of the preliminary study, we conducted a second greenhouse study using sweet sorghum as a test bioenergy crop. We co-applied organic sources of N (manure and biosolids) at 75 and 150 kg PAN ha^?1 (representing 50 and 100% N rate respectively) with 3 g GA ha^?1. In each batch of experiment, the crop was grown for 8 wk on Immokalee fine sand of minimal native fertility. After harvest, sufficient water was applied to soil in each pot to yield ～1.5 L (～0.75 pore volume) of leachate, and analyzed for total N and soluble reactive P (SRP). The reduced (50%) N application rate, together with GA, optimized biomass production. Application of GA at 3 g ha^?1, and the organic sources of N at 50% of the recommended N rate, decreased nutrient cost of producing the bioenergy biomass by ～$375 ha^?1 (>90% of total nutrient cost), and could reduce offsite N and P losses from vulnerable soils.     

Cover Crop Effects Increasing Carbon Storage in a Subtropical No‐Till Sandy Acrisol

The long‐term (8‐year) effects of summer (Mucuna spp.) and winter cover crops (Avena strigosa + Vicia sativa and Lolium multiflorum + Vicia sativa) in maize‐based cropping systems on the total, particulate, and mineral‐associated soil carbon (C) stocks in the 0‐ to 0.2‐m layer of a no‐till South Brazilian Acrisol (87 g kg^?1 clay) were evaluated. Annual C sequestration rates and the carbon management index (CMI) were calculated taking a fallow/maize (F/M) system as reference. A greater average C sequestration rate (0.68 Mg ha^?1 yr^?1) and greater C lability (particulate C/mineral‐associated C) were observed in the soil under the Mucuna system, and this was related to the higher biomass input in comparison to the winter cover crop systems. These cropping system effects on amount and lability of soil C were summarized through the CMI. The results highlight the potential of C retention in soils under warm and humid subtropical climate through the adoption of high C input summer cover crops in no‐till production systems aimed at further improvement in soil and environmental quality.     

Characterization of cultivable methanotrophs from paddy soils and rice roots

Abstract

Characterization of methanotrophs isolated from paddy soils and rice (Oryza sativa) roots was investigated in the present study. The number of methanotrophs in root homogenates of the rice cultivar Mutsuhomare was 4.9 × 10⁷ most-probable-number (MPN) g^?1 dry roots, in Yumeakari it was 2.0 × 10⁸ MPN g^?1 dry roots and in Kirara it was 4.6 × 10⁷ MPN g^?1 dry roots. Although bacterial cells were observed infrequently on the surface and in the interiors of roots before incubation, a large number of colonies, measuring 0.5–5 mm in diameter, were observed on the sterilized roots after incubation on nitrate mineral agar plates under methane in air. In particular, a large number of colonies were observed at the emergence sites of lateral roots and root hairs. Strains MD5-1 and M1 were isolated from the roots of Mutsuhomare and strain R62 was isolated from the root homogenate of Yumeakari. All isolates were catalase-positive and oxidase-positive, Gram-negative, straight-rod-shaped and curved-rod-shaped bacteria, and formed exospores. The isolates were able to fix nitrogen and grew in the absence of copper. In addition, all were found to be positive for naphthalene-oxidizing activities (corresponding to soluble methane mono-oxygenase activities). Strains MD5-1, M1 and R62 were closely related to Methylosinus sporium. Methanotrophic strains W3-6, SD3-5 and 2-19, isolated previously from paddy field soils, were classified into Methylosinus (W3-6) and Methylocystis (SD3-5 and 2-19) type II methanotrophs. Isolates from the rice roots (MD5-1, R62 and M1) grew logarithmically when casamino acid was used as the nitrogen source; however, the growth of these strains was reduced on the nitrate medium. These strains preferred amino acids over inorganic nitrogen as a nitrogen source for growth.