Chemical Fractions of Mn in Acidic Soils and Selection of Suitable Soil Extractants for Assessing Mn Availability to Maize (Zea Mays L.)

Twenty surface (0–15 cm) samples of acidic soils were analyzed for water soluble (WS), exchangeable (EX), lead displaceable (Pb-disp.), acid soluble (AS), manganese (Mn) oxide occluded (MnOX), organically bound (OB), amorphous Fe oxide occluded (AFeOX), crystalline iron (Fe) oxide occluded (CFeOX) and residual (RES) fractions of Mn, and also for extractable Mn in some common soil extractants: (diethylenetriaminepentaacetic acid (DTPA) (pH 7.3), DTPA (pH 5.3), AB-DTPA (pH 7.6), Mehlich-3 (pH 2.0), Modified Olsen, 0.005 M calcium chloride (CaCl₂), 1 M magnesium chloride (MgCl₂) and ion exchange resins. The WS-Mn fraction showed a significant and positive correlation with Mn extractable in DTPA (pH 5.3) and AB-DTPA (pH 7.6), while both WS-Mn and EX-Mn fractions correlated significantly and positively with Mn concentration and uptake by maize plants grown in these soils. The AB-DTPA (pH 7.6) and DTPA (pH 5.3) appeared suitable to assess the availability of Mn in acidic soils.     

Conversion of grassland to coniferous woodland has limited effects on soil nitrogen cycle processes

In the last century, conversion of native North American grasslands to Juniperus virginiana forests or woodlands has dramatically altered ecosystem structure and significantly increased ecosystem carbon (C) stocks. We compared soils under recently established J. virginiana forests and adjacent native C₄-dominated grassland to assess changes in potential soil nitrogen (N) transformations and plant available N. Over a 2-year period, concentrations of extractable inorganic N were measured in soils from forest and grassland sites. Potential gross N ammonification, nitrification, and consumption rates were determined using ¹⁵N isotope-dilution under laboratory conditions, controlling for soil temperature and moisture content. Potential nitrification rates (V_max) and microbial biomass, as well as soil physical and chemical properties were also assessed. Extractable NH₄⁺ concentrations were significantly greater in grassland soils across the study period (P ≤ 0.01), but analysis by date indicated that differences in extractable inorganic N occurred more frequently in fall and winter, when grasses were senescent but J. virginiana was still active. Laboratory-based rates of gross N mineralization (ammonification) and nitrification were greater in grassland soils (P ≤ 0.05), but only on one of four dates. Potential nitrification rates (V_max) were an order of magnitude greater than gross nitrification rates in both ecosystems, suggesting that nitrification is highly constrained by NH₄⁺ availability. Differences in plant uptake of N, C inputs, and soil microclimate as forests replace grasslands may influence plant available N in the field, as evidenced by seasonal differences in soil extractable NH₄⁺, and total soil C and N accumulation. However, we found few differences in potential soil N transformations under laboratory conditions, suggesting that this grassland-to-forest conversion caused little change in mineralizable organic N pools or potential microbial activity.     

Uptake and bioaccumulation of heavy elements by two earthworm species from a smelter contaminated area in northern Kosovo

As, Cd, Cu, Pb, Sb and Zn concentrations were determined in two earthworm species (Allolobophora rosea and Nicodrilus caliginosus) from a mining and industrial area in northern Kosovo and compared with their contents in the bulk soil and the main soil fractions. Earthworm specimens were collected at fifteen sites located at different distances from a Pb–Zn smelter along a gradient of decreasing contamination. Individuals of A. rosea and N. caliginosus showed similar tissue levels of As, Cd, Cu, Pb, Sb and Zn, suggesting that earthworm species belonging to the same eco-physiological group have a similar propensity to uptake and bioaccumulate heavy elements. Cd, Pb, Sb and Zn concentrations in both earthworm species were positively correlated with the respective total soil contents and generally decreased with distance from the smelter. The bioaccumulation factor (BAF) revealed that Cd and Zn were the only elements bioaccumulated by earthworms. The rank order of BAF values for both species was as follows: Cd > > Zn > > Cu > As = Pb = Sb. The absorption of Cd, Pb, Sb and Zn by earthworms mostly depended on the extractable, reducible and oxidable soil fractions, suggesting that the intestine is likely the most important uptake route. The extractable soil fraction constantly influenced the uptake of these heavy elements, whereas the reducible fraction was important mainly for Pb and Zn. The water soluble fraction had an important role especially for the most mobile heavy elements such as Cd and Zn, suggesting that dermal uptake is not negligible. As a whole, the analytical data indicate that soil fractionation patterns influence the uptake of heavy elements by earthworms, and the extractable fraction is a good predictor of heavy element bioavailability to these invertebrates in soil.     

Relationships between soil pH and microbial properties in a UK arable soil

Effects of changing pH along a natural continuous gradient of a UK silty-loam soil were investigated. The site was a 200 m soil transect of the Hoosfield acid strip (Rothamsted Research, UK) which has grown continuous barley for more than 100 years. This experiment provides a remarkably uniform soil pH gradient, ranging from about pH 8.3 to 3.7. Soil total and organic C and the ratio: (soil organic C)/(soil total N) decreased due to decreasing plant C inputs as the soil pH declined. As expected, the CaCO₃ concentration was greatest at very high pH values (pH > 7.5). In contrast, extractable Al concentrations increased linearly (R² = 0.94, p < 0.001) from below about pH 5.4, while extractable Mn concentrations were largest at pH 4.4 and decreased at lower pHs. Biomass C and biomass ninhydrin-N were greatest above pH 7. There were statistically significant relationships between soil pH and biomass C (R² = 0.80, p < 0.001), biomass ninhydrin-N (R² = 0.90, p < 0.001), organic C (R² = 0.83, p < 0.001) and total N (R² = 0.83, p < 0.001), confirming the importance of soil organic matter and pH in stimulating microbial biomass growth. Soil CO₂ evolution increased as pH increased (R² = 0.97, p < 0.001). In contrast, the respiratory quotient (qCO₂) had the greatest values at either end of the pH range. This is almost certainly a response to stress caused by the low p. At the highest pH, both abiotic (from CaCO₃) and biotic Co₂ will be involved so the effects of high pH on biomass activity are confounded. Microbial biomass and microbial activity tended to stabilise at pH values between about 5 and 7 because the differences in organic C, total N and Al concentrations within this pH range were small. This work has established clear relationships between microbial biomass and microbial activity over an extremely wide soil pH range and within a single soil type. In contrast, most other studies have used soils of both different pH and soil type to make similar comparisons. In the latter case, the effects of soil pH on microbial properties are confounded with effects of different soil types, vegetation cover and local climatic conditions.     

Cultivation effects on temporal changes of organic carbon and aggregate stability in desert soils of Hexi Corridor region in China

Sustainable agricultural use of cultivated desert soils has become a concern in Hexi Corridor in Gansu Province of China, because loss of topsoil in dust storms has been recently intensified. We chose four desert sites to investigate the effects of cultivation (cropping) on (i) soil organic C and its size fractions and (ii) soil aggregate stability (as a measure of soil erodibility). These parameters are of vital importance for evaluating the sustainability of agricultural practices.Total organic C as well as organic C fractions in soil (coarse organic C, 0.1–2 mm; young organic C, 0.05–0.1 mm; stable organic C, <0.05 mm) generally increased with the duration of the cultivation period from 0 (virgin soil, non-cultivated) to more than 30 years (p < 0.05). Compared to total organic C in virgin soils (2.3–3.5 g kg⁻¹ soil), significantly greater values were found after 10 to >20 years of cultivation (6.2–7.1 g kg⁻¹ soil). The increase in organic C in desert soils following prolonged cultivation was mainly the consequence of an increase in the coarse organic C. The increase in total organic C in soil was also dependent on clay content [total organic C = 0.96 + 0.249 clay content (%) + 0.05 cultivation year, R² = 0.48, n = 27, p < 0.001]. This indicates that clay protected soil organic C from mineralization, and also contributed to the increase in soil organic C as time of cultivation increased.There was a significant positive correlation between aggregate stability and total organic C across all field sites. The water stability of aggregates was low (with water-stable aggregate percentage ∼4% of dry-sieved aggregates of size 1–5 mm). There was no consistent pattern of increase in the soil aggregate stability with time of cultivation at different locations, suggesting that desert soils might remain prone to wind erosion even after 50 years of cultivation. Alternative management options, such as retaining harvested crop residues on soil surface and excluding or minimizing tillage, may permit sustainable agricultural use of desert soils.     

Detection and quantification of the nematophagous fungus Hirsutella minnesotensis in soil with real-time PCR

A real-time PCR assay was developed to quantify in soil the fungus Hirsutella minnesotensis, an important parasite of secondary-stage juvenile (J2) of the soybean cyst nematode. A primer pair 5′-GGGAGGCCCGGTGGA-3′ and 5′-TGATCCGAGGTCAACTTCTGAA-3′ and a TaqMan probe 5′-CGTCCGCCGTAAAACGCCCAAC-3′ were designed based on the sequence of the ITS region of the rRNA gene. The primers were highly species-specific. The PCR reaction system was very sensitive and able to detect as few as 4 conidia g^?1 soil. Regression analysis showed similar slopes and efficiency on DNA from pure culture (y = ?3.587x + 41.017, R² = 0.9971, E = 0.9055) and from Log conidia g^?1 soil (y = ?3.855x + 37.669, R² = 0.9139, E = 0.8172), indicating that the real-time PCR protocol can reliably quantify H. minnesotensis in the soil. The real-time PCR assay was applied to 20 soil samples from soybean fields, and compared with a parasitism assay. The real-time PCR assay detected H. minnesotensis in six of the soils, whereas the parasitism assay detected H. minnesotensis in the same six soils and three additional soils. The real-time PCR assay was weakly correlated (R² = 0.49) with the percentage of parasitized J2 in the six soils, indicating that different types of soil may interfere the efficiency of the real-time PCR assay, possibly due to the effect of soil types on efficacy of DNA extraction. The parasitism assay appeared to be more sensitive than real-time PCR in detecting presence of H. minnesotensis, but real-time PCR was much faster and less costly and provided a direct assessment of fungal biomass. Using the two assays in combination can obtain more complete information about the fungus in soil than either assay alone. Hirsutella parasitism was widespread and detected in 13 of the 20 field soils, indicating that these fungi may contribute to suppressiveness of soybean cyst nematode in nature and likely have high biological control potential for the nematode.     

Rapid estimation of microbial biomass in grassland soils by ultra-violet absorbance

A reliable and simple technique for estimating soil microbial biomass (SMB) is essential if the role of microbes in many soil processes is to be quantified. Conventional techniques are notoriously time-consuming and unreproducible. A technique was investigated that uses the UV absorbance at 280 nm of 0.5 M K₂SO₄ extracts of fumigated and unfumigated soils to estimate the concentrations of carbon, nitrogen and phosphorus in the SMB. The procedure is based on the fact that compounds released after chloroform fumigation from lysed microbial cells absorb in the near UV region. Using 29 UK permanent grassland soils, with a wide range of organic matter (2.9–8.0%) and clay contents (22–68%), it was demonstrated that the increase in UV absorbance at 280 nm after soil fumigation was strongly correlated with the SMB C (r=0.92), SMB N (r=0.90) and SMB P (r=0.89), as determined by conventional methods. The soils contained a wide range of SMB C (412–3412 μg g⁻¹ dry soil), N (57–346 μg g⁻¹ dry soil) and P (31–239 μg g⁻¹ dry soil) concentrations. It was thus confirmed that the UV absorbance technique described was a rapid, simple, precise and relatively inexpensive method of estimating soil microbial biomass.     

Response of microbial characteristics to heavy metal pollution of mining soils in central Tibet,China

Soil microbial activity plays a crucial role in soil microbiological processes, which can be used as a useful indicator to determine the ecological effects of heavy metal pollution on soils. The objective was to determine the effects of heavy metal pollution on mining soils at the Lawu mine of central Tibet, China on soil enzyme activities (sucrase, urease and acid phosphatase), microbial biomass C, N and P (MBC, MBN, and MBP), basal respiration, metabolic quotients, and N mineralization. Sixteen soil samples around the mine were sampled, and one soil sample, 2 km from the mine center, was taken as the control. Compared to the control, mining soils were polluted by heavy metals, Cu, Zn, Pb and Cd, resulting in decreases of sucrase activities, urease activities, acid phosphatase activities, MBC, MBN, MBP, and N mineralization, and increases of basal respiration and qCO₂. Multivariate analysis (cluster analysis [CA], principle component analysis [PCA] and canonical correlation analysis [CCA]) indicated nine microbial variables were only reduced to one principal component explaining 72% of the original variances, and MBC (R² = 0.93) had the highest positive loadings on the principal component. Mining soils polluted by heavy metals were perfectly clustered into four groups, which were highly distinguished by MBC. There were significant canonical correlations between soil heavy metals and microbial indexes on two canonical variates (R1 = 0.99, p < 0.001; R2 = 0.97, p < 0.01), which further demonstrated significant correlations between soil heavy metal contents and microbial characteristics. Hence, our results suggested that MBC may be used a sensitive indicator for assessing changes in soil environmental quality in metal mine of central Tibet.     

Evaluation of an optimal extraction method for measuring d-ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) in agricultural soils and its association with soil microbial CO2 assimilation

Assimilating atmospheric carbon (C) into terrestrial ecosystems is recognized as a primary measure to mitigate global warming. Ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) is the dominant enzyme by which terrestrial autotrophic bacteria and plants fix CO₂. To investigate the possibility of using RubisCO activity as an indicator of microbial CO₂ fixation potential, a valid and efficient method for extracting soil proteins is needed. We examined three methods commonly used for total soil protein extraction. A simple sonication method for extracting soil protein was more efficient than bead beating or freeze–thaw methods. Total soil protein, RubisCO activity, and microbial fixation of CO₂ in different agricultural soils were quantified in an incubation experiment using ¹⁴C-CO₂ as a tracer. The soil samples showed significant differences in protein content and RubisCO activity, defined as nmol CO₂ fixed g⁻¹ soil min⁻¹. RubisCO activities ranged from 10.68 to 68.07 nmol CO₂ kg⁻¹ soil min⁻¹, which were closely related to the abundance of cbbL genes (r = 0.900, P = 0.0140) and the rates of microbial CO₂ assimilation (r = 0.949, P = 0.0038). This suggests that RubisCO activity can be used as an indicator of soil microbial assimilation of atmospheric CO₂.     

Responses of soil dissolved organic matter to long-term plantations of three coniferous tree species

Tree species have significant effects on the availability and dynamics of soil organic matter. In the present study, the pool sizes of soil dissolved organic matter (DOM), potential mineralizable N (PMN) and bio-available carbon (C) (measured as cumulative CO₂ evolution over 63 days) were compared in soils under three coniferous species — 73 year old slash (Pinus elliottii), hoop (Araucaria cunninghamii) and kauri (Agathis robusta) pines. Results have shown that dissolved organic N (DON) in hot water extracts was 1.5–1.7 times lower in soils under slash pine than under hoop and kauri pines, while soil dissolved organic C (DOC) in hot water extracts tended to be higher under slash pine than hoop and kauri pines but this was not statistically significant. This has led to the higher DOC:DON ratio in soils under slash pine (32) than under hoop and kauri pines (17). Soil DOC and DON in 2 M KCl extracts were not significantly different among the three tree species. The DOC:DON ratio (hot water extracts) was positively and significantly correlated with soil C:N (R² = 0.886, P < 0.01) and surface litter C:N ratios (R² = 0.768, P < 0.01), indicating that DOM was mainly derived from litter materials and soil organic matter through dissolution and decomposition. Soil pH was lower under slash pine (4.5) than under hoop (6.0) and kauri (6.2) pines, and negatively correlated with soil total C, C:N ratio, DOC and DOC:DON ratio (hot water extracts), indicating the soil acidity under slash pine favored the accumulation of soil C. Moreover, the amounts of dissolved inorganic N, PMN and bio-available C were also significantly lower in soils under slash pine than under hoop and kauri pines. It is concluded that changes in the quantity and quality of surface litters and soil pH induced by different tree species largely determined the size and quality of soil DOM, and plantations of hoop and kauri pine trees may be better in maintaining long-term soil N fertility than slash pine plantations.     

Respiratory substrate availability plays a crucial role in the response of soil respiration to environmental factors

We examined the response of the temperature coefficient (Q₁₀) for soil respiration to changes in soil temperature and soil moisture through a laboratory incubation experiment. Two types of soils differing in vegetation and moisture status were collected and incubated under two temperatures (10 and 30 °C) and two soil moisture regimes (35 and 75% of water holding capacity, WHC) for 5 weeks. Before and after the incubation experiment, the temperature coefficient of soil respiration was measured using soda-lime method by changing temperature in a water bath. For both soils, the mean Q₁₀ values of the respiration rate were 2.0 in the 30 °C and 2.3 in the 10 °C soil treatments. Higher temperature with lower soil moisture treatment significantly decreased the Q₁₀ value, whereas lower temperature with higher soil moisture treatment significantly enhanced the Q₁₀ value (ANOVA, p < 0.05). These results indicate that soils became less sensitive to temperature when incubated under higher temperature with higher moisture conditions, and more sensitive in lower temperature with higher moisture conditions.There was a significant correlation (r² = 0.67, p < 0.05) between water-soluble carbon (WSC) and soil respiration rate. However, the correlation between soil respiration rate and microbial biomass carbon (MBC) was weak (r² = 0.27, p > 0.05). Although incubation temperature and moisture accounted for 40 and 29% (as r² × 100%), respectively, of variations in Q₁₀, soil water-soluble carbon content alone could have explained 79% of the variation, indicating that the availability of respiratory substrate, rather than the pool of soil microorganisms, played a crucial role in the response of the temperature coefficient to environmental factors. These results suggest that biotic factors should also be taken into consideration when using the Q₁₀ function to predict the response of soil respiration to global warming.     

Nitrous oxide production in turfgrass systems: Effects of soil properties and grass clipping recycling

Soil N₂O emissions can affect global environments because N₂O is a potent greenhouse gas and ozone depletion substance. In the context of global warming, there is increasing concern over the emissions of N₂O from turfgrass systems. It is possible that management practices could be tailored to reduce emissions, but this would require a better understanding of factors controlling N₂O production. In the present study we evaluated the spatial variability of soil N₂O production and its correlation with soil physical, chemical and microbial properties. The impacts of grass clipping addition on soil N₂O production were also examined. Soil samples were collected from a chronosequence of three golf courses (10, 30, and 100-year-old) and incubated for 60 days at either 60% or 90% water filled-pore space (WFPS) with or without the addition of grass clippings or wheat straw. Both soil N₂O flux and soil inorganic N were measured periodically throughout the incubation. For unamended soils, cumulative soil N₂O production during the incubation ranged from 75 to 972 ng N g⁻¹ soil at 60% WFPS and from 76 to 8842 ng N g⁻¹ soil at 90% WFPS. Among all the soil physical, chemical and microbial properties examined, soil N₂O production showed the largest spatial variability with the coefficient of variation ~110% and 207% for 60% and 90% WFPS, respectively. At 60% WFPS, soil N₂O production was positively correlated with soil clay fraction (Pearson's r = 0.91, P < 0.01) and soil NH₄⁺–N (Pearson's r = 0.82, P < 0.01). At 90% WFPS, however, soil N₂O production appeared to be positively related to total soil C and N, but negatively related to soil pH. Addition of grass clippings and wheat straw did not consistently affect soil N₂O production across moisture treatments. Soil N₂O production at 60% WFPS was enhanced by the addition of grass clippings and unaffected by wheat straw (P < 0.05). In contrast, soil N₂O production at 90% WFPS was inhibited by the addition of wheat straw and little influenced by glass clippings (P < 0.05), except for soil samples with >2.5% organic C. Net N mineralization in soil samples with >2.5% organic C was similar between the two moisture regimes, suggesting that O₂ availability was greater than expected from 90% WFPS. Nonetheless, small and moderate changes in the percentage of clay fraction, soil organic matter content, and soil pH were found to be associated with large variations in soil N₂O production. Our study suggested that managing soil acidity via liming could substantially control soil N₂O production in turfgrass systems.     

Moisture pulses,trace gas emissions and soil C and N in cheatgrass and native grass-dominated sagebrush-steppe in Wyoming,USA

Effects of large-scale weed invasion on the nature and magnitude of moisture-pulse-driven soil processes in semiarid ecosystems are not clearly understood. The objective of this study was to monitor carbon dioxide (CO₂) and nitrous oxide (N₂O) emissions and changes in soil carbon (C) and nitrogen (N) following the application of a water pulse in Wyoming big sagebrush (Artemisia tridentata ssp. wyomingensis) communities dominated by the exotic annual grass cheatgrass (Bromus tectorum) and by the native perennial grass western wheatgrass (Pascopyrum smithii). Sampling locations were established in shrub interspaces dominated by B. tectorum and P. smithi and beneath shrub canopies adjacent to interspaces dominated by B. tectorum and P. smithi, where no grass was present. Soils were classified as fine-loamy, mixed, Borollic Haplargids. Soil samples (0–10 cm) and air samples were collected at 0, 4, 8, 24, 49, 72, and 216 h following additions of 25.4 mm of water. Soil samples were analyzed for dissolved organic carbon (DOC), microbial biomass carbon (MBC), extractable ammonia (NH₄⁺), extractable nitrate (NO₃^?), and dissolved organic nitrogen (DON). Grass species induced differences in soil nitrification, N₂O and CO₂ emissions, and the quantity and timing of labile C available to microbial populations responding to increased moisture availability. In the first 8-h phase after wetting P. smithii soils had the greatest CO₂ emissions compared to other soils but B. tectorum soils had the greatest N₂O emissions and the greatest increases in CO₂ emissions relative to before wetting. Microbial biomass C in B. tectorum interspace soils increased rapidly but the response was short-lived despite sufficient water availability. After the first 8 h of soil response to wetting, the observed MBC declines in B. tectorum interspace coincided with disproportional DOC and DON concentration increases. Similar DOC and DON increases were also observed in B. tectorum soils beneath shrub canopy. In contrast, DOC and DON concentrations in P. smithii soils remained unaffected by soil wetting and small MBC increases observed during the first 8-h phase did not decline as rapidly as in B. tectorum interspace soils. In conclusion, summer drying-wetting cycles that occur frequently in areas invaded by B. tectorum can accelerate rates of nitrification and C mineralization, and contribute significantly to trace gas emissions from sagebrush-steppe grasslands. With frequent summer rainfall events, the negative consequences B. tectorum presence in the ecosystem can be significant.     

Soil application of meat and bone meal. Short-term effects on mineralization dynamics and soil biochemical and microbiological properties

Meat and bone meal (MBM) utilization for animal production was banned in the European Union since 2000 as a consequence of the appearance of transmissive spongiform encephalopathies. Soil application could represent a lawful and effective strategy for the sustainable recycling of MBM due to its relevant content of nutritive elements and organic matter. The effectiveness of MBM as organic fertilizer needs to be thoroughly investigated since there is a lack of knowledge about the mineralization dynamics of MBM in soil and the impact of such residues, in particular the high content of lipids, on soil biochemical and microbiological properties. For this aim, a defatted (D) and the correspondent non-defatted (ND) MBM were added at two rates (200 and 400 kg N ha^?1) to two different moist soils and incubated at 15 and 20 °C for 14 d. MBM mineralization dynamics was studied by measuring CO₂ evolution. Water extractable organic C, K₂SO₄-extractable NO₃^? and NH₄⁺, microbial biomass ninhydrin-reactive N, enzymatic activities (FDA, urease, protease, alkaline phosphatase) and microbial composition (aerobic and anaerobic bacteria, fungi) were measured 2 and 14 d after MBM addition to the soil. The rate of CO₂ evolution showed a maximum 2–3 d after the addition of MBM, followed by a decrease approaching the control. MBM mineralization was fast with, on average, 54% of total CO₂ evolved in the first 4 d of incubation at 20 °C. The percentage of added C which was evolved as CO₂ at the end of the incubation period ranged between 8% and 16% and was affected by temperature, soil type and MBM treatment (ND > D). Soil amendment with MBM caused a noteworthy increase in both extractable NH₄⁺ and NO₃^? (about 50% of added N) which was higher for ND. The addition of MBM also enhanced microbial content and activity. Microbial biomass increased as a function of the rate of application and was higher for ND with respect to D. The increase in numbers of aerobic and anaerobic bacteria and fungi caused by MBM addition was, in general, more pronounced with ND. Enzymatic activity in amended soils showed an enhancement in nutrient availability and element cycling. At the rate of application of present work, lipids did not cause adverse effects on soil microorganisms.The potential of MBM as effective organic fertilizer was supported by the large increase in available N and the enhancement of the size and activity of soil microorganisms.     

The temperature dependence of dicyandiamide (DCD) degradation in soils: A data synthesis

Dicyandiamide (DCD, C₂H₄N₄) is a nitrification inhibitor that has been studied for more than 80 years. However, there are few papers that have examined the use of DCD on dairy farms where cattle graze pasture and where urine is the primary form of nitrogen (N) deposited onto soils. After DCD was applied (10 kg DCD ha^?1) with bovine urine (700–1200 kg N ha^?1) to five soils throughout New Zealand, the reduction in direct nitrous oxide (N₂O) emissions was significant and remarkably consistent (71 ± 8%, average ± standard error). The application of DCD to these soils occurred in autumn and winter; daily average soil temperature (T) was reported but these data were not further analysed. Perusal of the literature suggested no consensus on the temperature dependence of DCD degradation in soils. Based on published data from controlled-environment studies of soils sampled in four countries, we quantified the relation between T and the time for DCD concentration in soils to decline to half its application value (t_½) as t_½ (T) = 168e^?0.084T with parameter standard errors of ±16 d and ±0.011 d^?1, respectively (n = 16). For example, at 5 °C a 1 °C increase in T reduced t_½ from 110 to 101 d whereas at 25 °C the reduction was 20–19 d. Analysing T data from the New Zealand trials using our t_½ (T) function, over 43–89 d when direct N₂O emissions from treated plots became indistinguishable from the controls, the estimated percentage of applied DCD remaining in the soil averaged 43 ± 10%. These calculations suggested the apparently remaining DCD was ineffective with respect to direct N₂O emissions. In the absence of measurements, explanations for this interpretation included vertical displacement of the DCD and sorption onto organic matter in soils. The consistent DCD efficacy from these trials corresponded with T generally <10 °C, so it is suggested as an application criteria for the reduction of direct N₂O emissions from pastoral soils subjected to urine excretion by grazing cattle.     

Effects of two soil reclamation techniques on the distribution of the organic N compounds in a 15N labelled burnt soil

The evolution of the soil organic-N forms and their bio-availability was studied in a ¹⁵N labelled and burnt soil (BLS) after two successive reclamation steps under greenhouse conditions: a 3-month growing period of Lolium, without (BLS-L) or with poultry manure addition (4 and 8 Mg ha^− 1: BLS + PM4-L and BLS + PM8-L), followed by a 12-month growing phase of pine seedlings (BLS-P, BLS + PM4-P and BLS + PM8-P). The results were compared with those obtained for the homologous labelled unburnt soil (LS, LS-L and LS-P) to evaluate the efficacy of these reclamation techniques in the mitigation of the drastic post-fire changes exhibited by the major biologically available N pool in terrestrial ecosystems: the soil organic N. The significant and steady decrease of the ¹⁵N enrichment observed in the unburnt soil during the successive plant growth cycles (LS > LS-L > LS-P) contrasts with the lack of significant changes, in both the content of total organic ¹⁵N and the atom % ¹⁵N in excess, among the treatments with the burnt soil (BLS ≥ BLS-L ≥ BLS-P). These results showed that: a) in LS, N mineralization proceeds faster for the recently incorporated N (¹⁵N enriched) than for the native N, supplying the growing vegetation with inorganic N more ¹⁵N enriched than the bulk soil N; and b) in BLS, soil combustion has reduced the usually higher biological availability of the recently added N to levels similar to those of the endogenous N.The re-vegetation with Lolium and Pinus and the addition of poultry manure mitigated the high differences observed in the size of the amino acid and the organic derived NH₄⁺–N pools due to the combustion process, which are usual between burnt and unburnt soils. Conversely, these burnt soil reclamation techniques (re-vegetation and poultry manure addition), even jointly used, were unable to reduce the huge differences observed between the burnt and the unburnt soils for the other N fractions considered (amides, amino sugars, hydrolysable unidentified-N, hydrolysable organic N and un-hydrolysable N) that accounted for more than 80% of the soil organic N. Consequently, it seems that without the introduction of N₂-fixing microorganisms or plants in the burnt soils the recovery of the natural soil organic N composition will take place slowly.     

Turnover of low molecular weight dissolved organic C (DOC) and microbial C exhibit different temperature sensitivities in Arctic tundra soils

Polar ecosystems are currently experiencing some of the fastest rates of climate warming. An increase in soil temperature in High Arctic regions may stimulate soil permafrost melting and microbial activity, thereby accelerating losses of greenhouse gases. It is therefore important to understand the factors regulating the rates of C turnover in polar soils. Consequently, our aims were to: (1) assess the concentration of low molecular weight (MW) dissolved organic carbon (DOC) in soil, (2) to investigate the temperature-dependent turnover of specific low MW compounds, and (3) to analyse the influence of substrate concentration on C cycling. Microbial mineralisation of labile low MW DOC in two High Arctic tundra soils was investigated using soil solutions spiked with either ¹⁴C-labelled glucose or amino acids. Spiked solutions were added to the top- and sub-soil from two ecosystem types (lichen and Carex dominated tundra), maintained at three temperatures (4–20 °C), and their microbial mineralisation kinetics monitored. ¹⁴CO₂ evolution from the tundra soils in response to ¹⁴C-glucose and -amino acid addition could best be described by a double first order exponential kinetic equation with rate constants k₁ and k₂. Both forms of DOC had a short half-life (t_1/2) in the pool of microbial respiratory substrate (t_1/2 = 1.07 ± 0.10 h for glucose and 1.63 ± 0.14 h for amino acids; exponential coefficient k₁ = 0.93 ± 0.07 and 0.64 ± 0.06 h^?1 respectively) whilst the second phase of mineralisation, assumed to be C that had entered the microbial biomass, was much slower (average k₂ = 1.30 × 10^?3 ± 0.49 × 10^?4 h^?1). Temperature had little effect on the rate of mineralisation of ¹⁴C used directly as respiratory substrate. In contrast, the turnover rate of the ¹⁴C immobilized in the microbial biomass prior to mineralisation was temperature sensitive (k₂ values of 0.99 × 10^?3 h^?1 and 1.66 × 10^?3 h^?1 at 4 and 20 °C respectively). Concentration-dependent glucose and amino acid mineralisation kinetics of glucose and amino acids (0–10 mM) were best described using Michaelis–Menten kinetics; there was a low affinity for both C substrates by the microbial community (K_m = 4.07 ± 0.41 mM, V_max = 0.027 ± 0.005 mmol kg^?1 h^?1). In conclusion, our results suggest that in these C limiting environments the flux of labile, low MW DOC through the soil solution is extremely rapid and relatively insensitive to temperature. In contrast, the turnover of C incorporated into higher molecular weight microbial C pools appears to show greater temperature sensitivity.     

Applying an oxygen-based respiratory assay to assess soil microbial responses to substrate and N availability

Documented approaches for measuring soil microbial activities and their controlling factors under field conditions are needed to advance understanding of soil microbial processes for numerous applications. We manipulated field plots with carbon (C) and nitrogen (N) additions to test the capability of a respiratory assay to: (1) measure respiration of endogenous soil C in comparison to field-measured CO₂ fluxes; (2) determine substrate-induced respiratory (SIR) activities that are consistent with substrate availability in the field; and, (3) report N availability in the field based on assay responses with and without added N. The respiratory assay utilizes a microplate containing an oxygen-sensitive fluorescent ruthenium dye. Respiratory activities measured with this approach have previously been shown to occur within short (6–8 h) incubation periods using low substrate concentrations that minimize enrichment during the assay. Field treatments were conducted in a randomized full-factorial design with C substrate (casamino acids, glucose, or none) and inorganic N (±) as the treatment factors. With one exception, we found that respiration of endogenous soil C in the assay responded to the field treatments in a similar manner to CO₂ fluxes measured in the field. Patterns of SIR with low concentrations of added amino acid or carbohydrate substrate (200 μg C g⁻¹ soil) were consistent with field treatments. The ratio (N_ratio) of carbohydrate respiration with added N (25 μg N g⁻¹ soil) to the same without N in the assay was significantly (P < 0.05) decreased by field N amendment. The carbohydrate N_ratio exhibited a logarithmic relationship (r = 0.64, P < 0.05) with extractable inorganic soil nitrate and ammonium concentrations. These data significantly extend and support the capability of this oxygen-based respiratory assay to evaluate in situ soil activities and examine factors that limit these activities.     

Impact of high cadmium and nickel soil concentration on selected physiological parameters of Arundo donax L.

The purpose of this study was to investigate the effects of high cadmium and nickel soil concentrations on selected physiological parameters of Arundo donax L. A 2-year pot experiment was held in the field and the pots were irrigated with aqueous solutions of Cd and Ni in concentrations of 5, 50 and 100 ppm, against the control (tap water). At the end of the cultivation periods the pots soil was divided into three equal zones and total and NH₄OAc extractable Cd and Ni concentrations were determined. The top zone exhibited the highest metal content. Cadmium and nickel total concentrations at the end of the experiment were up to 973.8 mg kg⁻¹ and 2543.3 mg kg⁻¹ respectively, while NH₄OAc extractable Cd was up to 291.7 mg kg⁻¹ and Ni up to 510.3 mg kg⁻¹. Stomatal conductance ranged between 0.3 and 0.8 mol CO₂ m⁻² s⁻¹, intercellular CO₂ concentration ranged between 212.9 and 243.0 ppm CO₂, stomatal resistance between 0.6 and 1.3 s cm⁻¹, chlorophyll content (SPAD values) between 46.3 and 57.0 and chlorophyll fluorescence (F_v/F_m) ranged between 0.8 and 0.9. All studied physiological parameters did not show statistically significant differences among control and heavy metal treated plants for both years; therefore, high soil cadmium and nickel concentration did not inhibit stomatal opening and did not affect the function of the photosynthetic machine of A. donax plants.     

Earthworm-induced N2O emissions in a sandy soil with surface-applied crop residues

Earlier research with endogeic and epigeic earthworm species in loamy arable soil has shown that both earthworm groups can increase nitrous oxide (N₂O) emissions, provided that crop residue placement matches the feeding strategy of the earthworm ecological group(s). However, it is not yet clear whether these effects also occur in sandy soils which typically contain less soil organic matter and have low soil aggregation levels. Here, we aimed to quantify N₂O emissions as affected by endogeic and/or epigeic earthworm species, and to relate changes in N₂O emissions to earthworm-induced changes in soil properties in a sandy soil. A 90 day mesocosm study was conducted with sandy soil and ¹⁵N-labeled radish (Raphanus sativus cv. Adagio L.) residue applied on top. Treatments included: (i) no earthworm addition, (ii) addition of the endogeic species Aporrectodea caliginosa (Savigny), (iii) addition of the epigeic species Lumbricus rubellus (Hoffmeister), and (iv) both species combined. An additional treatment was included without earthworms and with residue manually incorporated into the soil. L. rubellus significantly increased cumulative N₂O emissions from 228 to 859 μg N₂O–N kg^?1 (F_1,12 = 83.12, P < 0.001), whereas A. caliginosa did not affect N₂O emissions. In contrast to earlier studies in loamy soil, no positive interaction between both species with regard to N₂O emissions was found. This was probably related to high competition for organic resources in the relatively poor soil and a low potential for stable soil aggregate formation (and associated anaerobic microsites) by endogeic worms in sandy soil. ¹⁵N isotope analysis revealed that the activity of L. rubellus significantly increased (F_1,12 = 6.20, P = 0.028) the recovery of ¹⁵N in the 250–8000 μm size fraction, indicating incorporation of crop residues into the mineral soil. When residues were manually incorporated, N₂O emissions were significantly (P < 0.008) lower (509 μg N₂O–N kg^?1) than when incorporated by L. rubellus. The high N₂O emissions in the presence of L. rubellus, when compared to manual mixing, suggest a stimulation of microbial activity and/or changes in the microbial community composition. Insights on the earthworm effects on N₂O emission from such soils are discussed.