A family of three mouse potassium channel genes with intronless coding regions

To understand the molecular mechanisms responsible for generating physiologically diverse potassium channels in mammalian cells, mouse genomic clones have been isolated with a potassium channel complementary DNA, MBK1, that is homologous to the Drosophila potassium channel gene, Shaker. A family of three closely related potassium channel genes (MK1, MK2, and MK3) that are encoded at distinct genomic loci has been isolated. Sequence analysis reveals that the coding region of each of these three genes exists as a single uninterrupted exon in the mouse genome. This organization precludes the generation of multiple forms of the protein by alternative RNA splicing, a mechanism known to characterize the Drosophila potassium channel genes Shaker and Shab. Thus, mammals may use a different strategy for generating diverse K+ channels by encoding related genes at multiple distinct genomic loci, each of which produces only a single protein.     

Human endothelial cell growth factor: cloning, nucleotide sequence, and chromosome localization

Several of the endothelial cell polypeptide mitogens that have been described probably play a role in blood vessel homeostasis. Two overlapping complementary DNA clones encoding human endothelial cell growth factor (ECGF) were isolated from a human brain stem complementary DNA library. Southern blot analysis suggested that there is a single copy of the ECGF gene and that it maps to human chromosome 5 at bands 5q31.3 to 33.2 A 4.8-kilobase messenger RNA was present in human brain stem messenger RNA. The complete amino acid sequence of human ECGF was deduced from the nucleic acid sequence of these clones; it encompasses all the well-characterized acidic endothelial cell polypeptide mitogens described by several laboratories. The ECGF-encoding open reading frame is flanked by translation stop codons and provides no signal peptide or internal hydrophobic domain for the secretion of ECGF. This property is shared by human interleukin-1, which is approximately 30 percent homologous to ECGF.     

Cloning and expression of a rat brain GABA transporter

A complementary DNA clone (designated GAT-1) encoding a transporter for the neurotransmitter gamma-aminobutyric acid (GABA) has been isolated from rat brain, and its functional properties have been examined in Xenopus oocytes. Oocytes injected with GAT-1 synthetic messenger RNA accumulated [3H]GABA to levels above control values. The transporter encoded by GAT-1 has a high affinity for GABA, is sodium-and chloride-dependent, and is pharmacologically similar to neuronal GABA transporters. The GAT-1 protein shares antigenic determinants with a native rat brain GABA transporter. The nucleotide sequence of GAT-1 predicts a protein of 599 amino acids with a molecular weight of 67 kilodaltons. Hydropathy analysis of the deduced protein suggests multiple transmembrane regions, a feature shared by several cloned transporters; however, database searches indicate that GAT-1 is not homologous to any previously identified proteins. Therefore, GAT-1 appears to be a member of a previously uncharacterized family of transport molecules.     

Molecular cloning of the chicken progesterone receptor

To define the functional domains of the progesterone receptor required for gene regulation, complementary DNA (cDNA) clones encoding the chicken progesterone receptor have been isolated from a chicken oviduct lambda gt11 cDNA expression library. Positive clones expressed antigenic determinants that cross-reacted with six monospecific antibodies derived from two independent sources. A 36-amino acid peptide sequence obtained by microsequencing of purified progesterone receptor was encoded by nucleotide sequences in the longest cDNA clone. Analysis of the amino acid sequence of the progesterone receptor deduced from the cDNA clones revealed a cysteine-rich region that was homologous to a region found in the estrogen and glucocorticoid receptors and to the avian erythroblastosis virus gag-erb-A fusion protein. Northern blot analysis with chicken progesterone receptor cDNA's indicated the existence of at least three messenger RNA species. These messages were found only in oviduct and could be induced by estrogens.     

RNA沉默及其在植物基因功能研究和作物改良中的应用

RNA沉默是指导入或细胞内转录合成的双链RNA会特异性地降解具有同源序列的mRNA,从而导致内源的、外源的和病毒基因的沉默,它是真核生物特有的一种阻止转座子转座和抵御外源DNA入侵的防御机制。利用RNA沉默技术,人们正对大量基因进行功能研究,并在作物性状改良方面取得了一些可喜成果。     

D-alanine in the frog skin peptide dermorphin is derived from L-alanine in the precursor

A D-alanine-containing peptide termed dermorphin, with potent opiate-like activity, has been isolated from skin of the frog Phyllomedusa sauvagei. Complementary DNA (cDNA) libraries were constructed from frog skin messenger RNA and screened with a mixture of oligonucleotides that contained the codons complementary to five amino acids of dermorphin. Clones were detected with inserts coding for different dermorphin precursors. The predicted amino acid sequences of these precursors contained homologous repeats of 35 amino acids that included one copy of the heptapeptide dermorphin. In these cloned cDNAs, the alanine codon GCG occurred at the position where D-alanine is present in the end product. This suggests the existence of a novel post-translational reaction for the conversion of an L-amino acid to its D-isomer.     

Hairpin RNAs and retrotransposon LTRs effect RNAi and chromatin-based gene silencing

The expression of short hairpin RNAs in several organisms silences gene expression by targeted mRNA degradation. This RNA interference (RNAi) pathway can also affect the genome, as DNA methylation arises at loci homologous to the target RNA in plants. We demonstrate in fission yeast that expression of a synthetic hairpin RNA is sufficient to silence the homologous locus in trans and causes the assembly of a patch of silent Swi6 chromatin with cohesin. This requires components of the RNAi machinery and Clr4 histone methyltransferase for small interfering RNA generation. A similar process represses several meiotic genes through nearby retrotransposon long terminal repeats (LTRs). These analyses directly implicate interspersed LTRs in regulating gene expression during cellular differentiation.     

Cloning and expression of a Xenopus embryonic gap junction protein

Gap junctions in the early amphibian embryo may play a fundamental role in the regulation of differentiation by mediating the cell-to-cell transfer of chemical signals. A complementary DNA encoding a gap junction present in Xenopus oocytes and early embryos has now been cloned and sequenced. This protein sequence is homologous to the well-characterized gap junction structural proteins rat connexin32 and connexin43. RNA blot analysis of total Xenopus oocyte RNA showed hybridization to a single 1.6-kilobase band. This messenger RNA is abundant in oocytes, decreases to levels below the sensitivity of our assay by stage 15 (18 hours), and is not detectable in RNA from a number of adult organs. To confirm that the oocyte cDNA encodes a gap junction channel, the protein was over expressed in Xenopus oocytes by injection of RNA synthesized in vitro. Pairs of RNA-injected oocytes formed many more time- and voltage-sensitive cell-cell channels than water-injected pairs.     

Human GM-CSF: molecular cloning of the complementary DNA and purification of the natural and recombinant proteins

Clones of complementary DNA encoding the human lymphokine known as granulocyte-macrophage colony-stimulating factor (GM-CSF) were isolated by means of a mammalian cell (monkey COS cell) expression screening system. One of these clones was used to produce recombinant GM-CSF in mammalian cells. The recombinant hematopoietin was similar to the natural product that was purified to apparent homogeneity from medium conditioned by a human T-cell line. The human T-cell GM-CSF was found to be 60 percent homologous with the GM-CSF recently cloned from murine lung messenger RNA.     

Expression of a cloned rat brain potassium channel in Xenopus oocytes

Potassium channels are ubiquitous membrane proteins with essential roles in nervous tissue, but little is known about the relation between their function and their molecular structure. A complementary DNA library was made from rat hippocampus, and a complementary DNA clone (RBK-1) was isolated. The predicted sequence of the 495-amino acid protein is homologous to potassium channel proteins encoded by the Shaker locus of Drosophila and differs by only three amino acids from the expected product of a mouse clone MBK-1. Messenger RNA transcribed from RBK-1 in vitro directed the expression of potassium channels when it was injected into Xenopus oocytes. The potassium current through the expressed channels resembles both the transient (or A) and the delayed rectifier currents reported in mammalian neurons and is sensitive to both 4-aminopyridine and tetraethylammonium.     

丹尼斯凤梨叶片总RNA提取方法的比较

以丹尼斯凤梨(Guzmania‘Denise’)叶片为材料,利用Trizol试剂快速提取法、异硫氰酸胍法、苯酚法和CTAB法提取丹尼斯凤梨总RNA,通过RNA的产率、纯度、电泳图等分析来确立适用于丹尼斯凤梨总RNA分离的方法。结果表明,Trizol法提取的RNA具有28SrRNA、18SrRNA和5SrRNA3条较清晰的条带,很少有降解,具有较高的纯度,其他3种方法获得的RNA纯度较低、降解严重,有较多小分子和盐存在,RNA无明显条带出现,而是以小分子RNA弥散状分布。     

RNAi及其在植物遗传改良中的应用

RNAi(RNA interfering)是由与靶基因同源的双链RNA引发的、在动植物中普遍存在的序列特异的转录后基因沉默。这种现象在动物、植物和真菌中广泛存在并被证实,因此可能是生物的发育调控及抗外源或内源侵染的一种普遍的生理机制。对RNAi的研究是目前生物学领域研究的热点之一,近几年来该技术已经在功能基因组学、遗传学和医学等诸学科得到大量应用。本文将就RNAi的机制研究及其在植物遗传改良中的应用进行综述。     

RNA干涉及其应用

在各种各样的真核生物当中,双链RNA(dsRNA)促使了有效的同源mRNA分子降解,这个过程被称为RNA干扰(RNAi)。RNAi现象通过调控RNA抑制基因表达,它在植物、动物、真菌中广泛存在,被认为是一种抑制病毒性复制和转座子活动的抗御机制,而在此过程中,侵染型病毒为了能够不被这种机制干扰抑制,继续在寄主体内生存、繁殖,则产生了一种反抗御机制———即产生抑制蛋白来对付转录后基因沉默(PTGS)。对RNAi以及RNAi抑制物的作用机制、抑制物类型、特点及相关应用方面作了比较详尽的综述。dsRNA介导的PTGS将是分子生物学领域的研究热点之一,在研究基因功能,基因治疗,抗病毒基因工程,解剖和调控次生代谢途径等方面有着广泛的应用前景。     

Thiobases in Escherchia coli Transfer RNA: 2-Thiocytosine and 5-Methylaminomethyl-2-thiouracil

Two new sulfur-containing pyrimidine nucleotides have been isolated from hydrolyzates of Escherichia coli transfer RNA. The structures, 2-thiocytosine and 5-methylaminomethyl-2-thiouracil, have been assigned to the bases as a result of study of ultraviolet and mass spectra. An acid-degradation product, S-methylamino-methyluracil, has been synthesized and is identical to that derived from the natural product.     

Ribosomal RNA synthesis and processing in a particulate site in the HeLa cell nucleus

A particulate fraction has been isolated from detergent-prepared HeLa cell nuclei. The fraction consists largely of organelles that resemble the nucleoli of intact cells. The 45S RNA that is precursor to 28S and 18S ribosomal RNA is associated with the fraction. The 32S RNA that is labeled after the 45S RNA and is the apparent precursor to 28S RNA is also associated with the fraction. The nucleoplasm contains 28S RNA that behaves as an intermediate between the 32S nucleolar RNA and the 28S cytoplasmic RNA.     

水稻OsCERK2转基因植株的获得及初步分析

以水稻粳稻品种日本晴为研究材料,利用拟南芥CERK1的蛋白质序列检索,在水稻基因组候选了与拟南芥CERK1同源的水稻基因OsCERK2,通过RT-PCR分离了该基因的全长cDNA。生物信息学分析显示,OsCERK2是一种含有信号肽的质膜蛋白,胞外结构域含有LsyM基序,激酶结构域含有酪氨酸蛋白激酶结构域。构建了由35S启动子驱动该基因的过表达遗传转化载体和由玉米的泛素基因的启动子驱动的RNA干涉（RNAi）的遗传转化载体,利用农杆菌介导的遗传转化技术,将OsCERK2基因导入水稻,得到T0代转基因植株。对T0代植株进行了PCR检测和半定量RT-PCR检测,获得了OsCERK2有效表达的转基因植株。