Specific Behaviour of French Aphanomyces Euteiches Drechs. Populations For Virulence and Aggressiveness on Pea, Related to Isolates from Europe, America and New Zealand

The pathogenic variability of Aphanomyces euteiches on pea was investigated using a collection of 88 pea-infecting isolates from France and 21 isolates from Denmark, Sweden, Norway, USA, Canada and New Zealand. Aggressiveness and virulence were assessed by scoring the root symptoms on a differential set of six pea genotypes. Eleven virulence types were characterised. The virulence type I, previously described as virulent on the whole set, was predominant and included the most aggressive isolates of all geographical origins. The other types were much less prevalent, existing as one to five isolates. Three virulence types (III, IV and V) contained no French isolates. The type III, avirulent on MN313, was composed of American isolates only, and resembled the major group recently described in the USA. A wide range of aggressiveness was found within the virulence type I, and the French isolates appeared globally more aggressive than the foreign isolates. These findings indicate that isolates from the virulence type I should be used as references in breeding programs, and that pea lines PI180693 and 552 may be the most interesting resistance sources to date, despite their only partial resistance.     

Pathogenic characteristics of isolates of Aphanomyces euteiches from pea in France

Aphanomyces root rot ( Aphanomyces euteiches ) has become a very destructive disease in French pea crops since 1993. The host specificity of the French pea-infecting populations of this pathogen was investigated by inoculating pea, common vetch, alfalfa, broad bean and green bean with 91 pea-infecting A. euteiches isolates, originating from the main areas of infestation in France. These isolates were compared to 13 isolates from various countries and hosts (pea, green bean, alfalfa). Virulence phenotypes were defined according to the pathogenicity data on the different hosts: all isolates from France infected two to five legume species, with most infecting pea, vetch, alfalfa and broad bean. Four pathotypes were characterized within the French isolates: one type corresponded to broad host range isolates, the second was composed of isolates preferentially agressive on pea/vetch/alfalfa and weakly aggressive on broad bean, and two others corresponding to more specialized isolates that preferentially infected pea/vetch or pea/vetch/alfalfa. Most isolates from France were preferentially pathogenic on pea, like the pea-infecting isolates from other countries, but were less specialized than the alfalfa- and green bean-infecting isolates from other countries. These results suggest that A. euteiches isolates may be maintained on wild or cultivated legumes other than pea in France.     

Use of real-time PCR to examine the relationship between disease severity in pea and <Emphasis Type="Italic">Aphanomyces euteiches</Emphasis> DNA content in roots

Aphanomyces euteiches causes severe root rot of peas. Resistance is limited in commercial pea cultivars. Real-time fluorescent PCR assay specific for A. euteiches was used to study the relationship between disease severity and pathogen DNA content in infected peas. Five pea genotypes ranging in levels of resistance were inoculated with five isolates of A. euteiches. Plants were visually rated for disease development and the amount of pathogen DNA in roots was determined using the PCR assay. The susceptible genotypes Genie, DSP and Bolero tended to have significantly more disease and more pathogen DNA than the resistant genotypes 90-2079 and PI 180693. PI 180693 consistently had less disease, while 90-2079 had the lowest amount of pathogen DNA. The Spearman correlation between pathogen DNA quantity and disease development was positive and significant (P < 0.05) for three isolates, but was not significant for two other isolates. This suggests that the real-time PCR assay may have limited application as a selection tool for resistance in pea to A. euteiches. Its utility as a selection tool would be dependent on the correlation between disease development and pathogen DNA content for a given pathogen isolate. The accuracy and specificity of the real-time PCR assay suggests considerable application for the assay in the study of mechanisms of disease resistance and the study of microbial population dynamics in plants.     

Relationship between the extent of colonization by Verticillium dahliae and symptom expression in strawberry (Fragaria × ananassa) genotypes resistant to verticillium wilt

Eleven strawberry (Fragaria × ananassa) genotypes from the University of California breeding programme known to be resistant to verticillium wilt were inoculated with Verticillium dahliae. Individual plants were given a resistance score based on the severity of visual symptoms, and the extent of colonization was quantified as the percentage of petioles not colonized by the pathogen. Both resistance scores and the percentage of pathogen‐free petioles decreased significantly from May to June (P < 0·05) during each of two growing seasons, indicating a progression of both colonization and symptom expression. Even the most resistant genotypes had plants with some infected petioles, and manifested some symptoms of verticillium wilt. Significant (P < 0·05) genotypic variance was detected for the percentage of pathogen‐free petioles, but not for resistance score. The percentage of pathogen‐free petioles had a strongly positive genotypic correlation (r_g = 0·77, P < 0·01) with resistance score, indicating that about 60% of the genotypic variation for visual symptoms in this set of resistant genotypes was explained by the extent of colonization of individual plants by V. dahliae. Conversely, the genotypic correlation between the percentage of pathogen‐free petioles and the resistance score for plants sampled in May (r_g = 0·74, P < 0·01) was smaller than that for plants harvested in July (r_g = 0·93, P < 0·01). Together, these results suggest that the overall performance of strawberry genotypes in the presence of V. dahliae can be enhanced by both resistance and tolerance, but that tolerance may be less stable over the course of a season. Distinguishing between these two mechanisms may require evaluations that supplement visual assessments of resistance.     

The potential for the Rapid Screening of Potato Cultivars (Solanum tuberosum) for Resistance to Powdery Scab (Spongospora subterranea) using a Laboratory Bioassay

Powdery scab of potato, once established in a field, is difficult to control because of the longevity of the resting spores (cystosori) of the causal organism, Spongospora subterranea f.sp. subterranea. Host resistance is likely to be the most efficient in a long-term control strategy for preventing build-up of field inoculum and spread of the disease. Resistance screening of potato cultivars is mostly done in laborious field trials where disease development is likely to be unpredictable. A bioassay with potato tissue cultured plantlets and cystosori as inoculum is described and was tested for its potential to screen potato cultivars at an early stage for their relative susceptibility to powdery scab by comparing the lab results with field data. With cystosori inoculum of Swiss origin, the laboratory test showed clear differences between the potato cultivars in the severity of zoosporangial root infection which correlated better with ranked tuber infection data, compared to root galling. There are apparent differences in the relative trends in susceptibility between roots and tubers of five selected cultivars when using naturally infested soil instead of prepared cystosori as inoculum in the lab bioassay. Furthermore, differences in the severity of zoosporangial root infection of two selected cultivars were found when cystosori from different countries where used as inoculum. A possible host genotype × pathogen interaction is discussed. The bioassay has the potential to screen and select for resistant material at an early breeding stage thus making field trials not unnecessary but more economical. It will allow the use of a standard set of pathogen collections and facilitate testing for inoculum virulence in infested soils.     

Metabolome profiling to understand the defense response of sugar beet (Beta vulgaris) to Rhizoctonia solani AG 2-2 IIIB

Rhizoctonia crown and root rot (RCRR), caused by Rhizoctonia solani Kühn AG 2-2 IIIB, is an important disease of sugar beet. While RCRR can be managed by agronomic practices, plant resistance remains the primary method for control. However, the molecular processes that mediate resistance to R. solani are largely unknown. The metabolic changes that occurred during susceptible and resistant R. solani interactions were compared and characterized using nontargeted metabolomic profiling. Metabolites from infected and healthy, root and leaf tissue, were taken at 0 and 7 dai and detected using reversed-phase UHPLC-MS and GC-MS. There was a clear distinction in the metabolome between tissue type and genotype, and in response to R. solani. 143 compounds were annotated and several metabolites associated with plant defense to fungi were identified in both germplasm.