Usefulness of Japanese-radish residue in biological soil disinfestation to suppress spinach wilt disease accompanying with proliferation of soil bacteria in the Firmicutes

Biological soil disinfestation (BSD) is an effective method to suppress soilborne plant diseases by incorporation of plant biomass into soil under reduced, anoxic condition. Usefulness of Japanese-radish (daikon) residue as plant biomass for BSD was investigated by both model and field experiments in comparison with the effects of Brassica juncea plants or wheat bran. Considerable amounts of acetate together with minor amounts of propionate and butyrate were detected from the radish-treated soils at similar levels with those in soils treated with B. juncea plants or wheat bran. BSD treatments with radish residue reduced spinach wilt disease incidence in both model and field experiments. When the BSD-treated soil was treated again with irrigation and covering without biomass before next cropping, however, wilt disease was hardly suppressed. Clone library analysis based on 16S rRNA gene sequences was carried out to determine the changes in the bacterial community compositions in the treated soil samples. The analyses showed that the bacterial communities in the radish-treated soils were dominated by members of the classes Clostridia and Bacilli of the phylum Firmicutes in both experiments. The clostridial groups detected were diverse and the major operational taxonomic units (OTUs) were closely related to Clostridium saccharobutylicum, Clostridium sufflavum, Clostridium xylanovorans, and Oxobacter pfennigii, which had been commonly detected as the dominant groups in BSD-soils treated with B. juncea plants or wheat bran in our previous studies. The dominant clone groups belonging to the Bacilli class were closely related to several species such as Bacillus niacini, Bacillus circulans, and Bacillus pycnus. Dominancy of the Bacilli groups seemed to increase when radish residue was repeatedly applied as BSD material.     

Control of Fusarium wilt of carnation using organic amendments combined with soil solarization,and report of associated Fusarium species in southern Spain

Fusarium wilt is a disease that restricts carnation (Dianthus caryophyllus L.) yield worldwide. Efficacies in reducing the Fusarium wilt of carnation (FWC), of various types of organic amendments (fresh or pelletized poultry manure, pelletized Brassica carinata and olive residue compost) combined with soil solarization, were compared in two biennial field trials conducted in a greenhouse with a history of carnation monoculture over 8 years. Soil treatments combining organic amendments and soil solarization significantly reduced disease incidence (86–99%) and increased the number of commercial carnation stems by 5–9 times compared to non-treated plots. Twenty-one Fusarium spp. isolates, with different colony morphologies were recovered from soil samples taken in the greenhouse, before the application of treatments in June 2013. Nineteen of them were morphological and molecularly characterized. Additionally, two pathogenicity tests with 17 isolates recovered from greenhouse soils and two isolates recovered from organic amendments were performed. Fusarium species associated with carnation cultivation were identified as Fusarium oxysporum (43%), Fusarium proliferatum (24%), and Fusarium solani (33%). The phylogenetic analysis of the translation elongation factor 1 alpha (EF-1α) region distinguished highly aggressive isolates of F. oxysporum f. sp. dianthi, from low aggressive isolates. The pathogenicity tests showed that FWC has a complex etiology, with several Fusarium spp. identified as causal agents. F. proliferatum and F. solani are associated with carnation wilt for the first time in Spain.     

Effects of non-chemical soil fumigant treatments on root colonisation with arbuscular mycorrhizal fungi and strawberry fruit production

The effects of biofumigation and soil heating on arbuscular mycorrhizal fungi (AMF) colonisation, strawberry growth and strawberry yield in pot experiments compared with untreated soil and chemical fumigation with dazomet were tested. Three different Brassicaceae species (Brassica juncea, Eruca sativa, Sinapis alba) were used as biofumigant plant green manure and soil heating was applied to simulate soil solarisation. Half of the plants were inoculated with indigenous arbuscular mycorrhizal fungi inoculum. With one exception (E. sativa) among the uninoculated plants, the treatments significantly decreased the mycorrhizal colonisation parameters compared with the untreated control. Dazomet displayed the greatest inhibitory effects on AMF establishment. In addition, the intensity and number of bands corresponding to Glomus spp. obtained with temporal temperature-gradient gel electrophoresis were lower for strawberry plants from biofumigant treatments than from the control. For the inoculated plants, there were almost no significant differences among the mycorrhizal colonisation parameters. The mass of leaves for the uninoculated and inoculated plants was higher for almost all non-chemical soil fumigant treatments compared with the control, except for heating of the uninoculated treatments. The number of strawberry fruits for the uninoculated biofumigant treatments was the highest, being higher than the values observed for the heating treatments, the chemical disinfection treatments and the control. There were no significant differences among the inoculated treatments. Biofumigation with Brassicaceae species resulted in higher soil organic matter and mineral nutrients and had a relatively small effect on AMF colonisation (F% = 59.0, 80.3, 47.3 for Bj, Es and Sa, respectively) compared with uninoculated controls (F% = 84.3). Despite the reduced AMF colonisation, biofumigation resulted in a higher fruit number and mass of leaves. Therefore, it represents a non-chemical soil fumigation method that should be applied in sustainable strawberry production.     

Antimicrobial effects of black rice extract on Helicobacter pylori infection in Mongolian gerbil

It has been reported that cyanidin 3-O-glucoside (C3G) is an inhibitor of Helicobacter pylori toxin secretion. C3G is classified as an anthocyanin and is a major component of black rice extract (BRE). The present study aimed to identify a new functional food material to prevent H. pylori infection in Mongolian gerbil model. Toxicity in the liver and kidney were not detected after BRE administration (10 or 50 mg/kg). BRE treatment reduced bacterial colonization in animal gastric tissue, as well as infection signs as observed on the analysis of the hematological data. It was also found that the relative mRNA levels of the inflammatory cytokines were reduced in BRE-treated groups. These findings suggest that BRE acts as a potent inhibitor of H. pylori infection and pathogenesis in Mongolian gerbils. We propose that BRE may be used to manage gastroduodenal diseases caused by H. pylori infection.     

Effects of the invasive tomato red spider mite (Acari: Tetranychidae) on growth and leaf yield of African nightshades

The tomato red spider mite, Tetranychus evansi Baker and Pritchard, is one of the most serious pests of solanaceous crops in Africa. Field experiments were conducted to investigate its effects on the growth and leaf yield of five African nightshade species viz. Solanum americanum, S. sarrachoides, S. scabrum, S. tarderemotum and S. villosum during the 2008 and 2009 growing seasons. Plants were infested with 2–4 day-old female spider mites which were allowed to multiply. The number of mite motiles increased throughout the growing season in unsprayed plots and this number varied significantly between the African nightshade species. Except for S. sarrachoides, leaf damage was high on the other four Solanum species irrespective of the spraying regime during both seasons. However, S. scabrum had a significantly greater leaf area ratio (ratio of leaf area to total plant weight) and specific leaf area (ratio of leaf area to total leaf dry weight) during both seasons. Overall yields were 1.5 times more in S. scabrum and S. sarrachoides compared to S. americanum, S. tarderemotum and S. villosum. Our results show that T. evansi infestation affects the leaf area ratio and specific leaf area of African nightshade species differentially which eventually determines the plant's overall leaf yield. These findings present an opportunity for evaluation and selection of African nightshade species that can withstand spider mite infestation in small holder farms for increased vegetable production in Africa.     

Effect of microwave radiation on dry bean seed infected with Xanthomonas axonopodis pv. phaseoli with and without the use of chemical seed treatment

Common bacterial blight (Xanthomonas axonopodis pv. phaseoli) is a seed-borne disease that is difficult to control in dry bean (Phaseolus vulgaris L.). Laboratory and field studies were conducted over a two-year period to determine the effect of microwave radiation on navy (cv. Navigator and Envoy) and pinto (cv. AC Ole) bean. Laboratory tests resulted in a 12 to 25% decrease in germination following 50–60 s of radiation, while less than a 10% loss was observed between 0 and 40 s. Pathogen viability was also tested, however the incidence of pathogen infection was low and no correlation was observed between exposure time and the incidence of colonization. In field studies conducted at Morden, MB (2012) and Ridgetown and Exeter, ON (2012–2013) microwave radiation and two chemical seed treatments (copper hydroxide 53.8% and pyraclostrobin + fluxapyroxad + metalaxyl) were evaluated for their effect on emergence, disease infection, seed pick, yield and return on investment. The application of microwave treatment decreased emergence by up to 7%, but did not impact the other parameters measured. Chemical treatment alone or in combination with microwave treatment also did not affect emergence, disease incidence, yield, seed pick, or return on investment.     

Enhancement of biocontrol efficacy of Pichia membranaefaciens by hot water treatment in postharvest diseases of citrus fruit

Effects of hot water treatment (HWT; 53 °C for 2 min) and Pichia membranaefaciens, either alone or in combination, on controlling Penicillium italicum, Penicillium digitatum, and natural infection in citrus fruit were investigated. Results showed that the combined treatment significantly reduced disease incidence and lesion diameters of blue and green molds in artificially inoculated fruit whether the pathogens were inoculated after or before the treatment compared with the treatment of P. membranaefaciens or HWT alone. The combination of P. membranaefaciens with HWT was as effective as the fungicide treatment in natural infection trials. Application of HWT did not affect the growth of P. membranaefaciens in the wounds of citrus fruit at 20 °C or 4 °C. P. membranaefaciens combined with HWT effectively enhanced the phenylalanine ammonia-lyase, peroxidase, polyphenoloxidase, chitinase, and β-1,3-glucanase activities and stimulated the synthesis of phenolic compounds. These results suggest that the use of HWT is a useful approach to improve the efficacy of P. membranaefaciens in postharvest diseases of citrus fruit.     

Effect of high molecular weight glutenins and rye translocations on soft wheat flour cookie quality

The influence of high molecular weight glutenin subunits (HMW-GS) on wheat breadmaking quality has been extensively studied but the effect of different Glu-1 alleles on cookie quality is still poorly understood. This study was conducted to analyze the effect of HMW-GS composition and wheat-rye translocations on physicochemical flour properties and cookie quality of soft wheat flours. Alleles encoded at Glu-A1, Glu-B1 and Glu-D1 locus had a significant effect over physicochemical flour properties and solvent retention capacity (SRC) profile. The null allele for Glu-A1 locus presented the highest cookie factor observed (CF = 7.10), whereas 1BL/1RS and 1AL/1RS rye translocations had a negative influence on CF. The three cultivars that showed the highest CF (19, 44 and 47) had the following combination: Glu-A1 = null, Glu-B1 = 7 + 8, Glu-D1 = 2 + 12 and no secalins. Two prediction equations were developed to estimate soft wheat CF: one using the HMW-GS composition and the other using physicochemical flour parameters, where SRCsuc, SRC carb, water-soluble pentosans, damaged starch and protein turned out to be better CF predictors. This data suggests that grain protein allelic composition and physicochemical flour properties can be useful tools in breeding programs to select soft wheat of good cookie making quality.     

Effect of allelic variation at the Glu-3/Gli-1 loci on breadmaking quality parameters in hexaploid wheat (Triticum aestivum L.)

Low molecular weight glutenin subunits (LMW-GS) encoded by the Glu-3 loci are known to contribute to wheat breadmaking quality. However, the specific effect of individual Glu-3 alleles is not well understood due to their complex protein banding patterns in SDS-PAGE and tight linkage with gliadins at the Gli-1 locus. Using DNA markers and a backcross program, we developed a set of nine near isogenic lines (NILs) including different Glu-A3/Gli-A1 or Glu-B3/Gli-B1 alleles in the genetic background of the Argentine variety ProINTA Imperial. The nine NILs and the control were evaluated in three different field trials in Argentina. Significant genotype-by-environment interactions were detected for most quality parameters indicating that the effects of the Glu-3/Gli-1 alleles are modulated by environmental differences. None of the NILs showed differences in total flour protein content, but relative changes in the abundance of particular classes of proteins cannot be ruled out. On average, the Glu-A3f, Glu-B3b, Glu-B3g and Glu-B3i_Man alleles were associated with the highest values in gluten strength-related parameters, while Glu-A3e, Glu-B3a and Glu-B3i_Chu were consistently associated with weak gluten and low quality values. The value of different Glu-3/Gli-1 allele combinations to improve breadmaking quality is discussed.     

Responses of glutamine synthetase activity and gene expression to nitrogen levels in winter wheat cultivars with different grain protein content

Glutamine synthetase (GS) plays a central role in plant nitrogen (N) metabolism, which improves crops grain protein content. A pot experiment in field condition was carried out to evaluate GS expression and activity, and grain protein content in high (Wanmai16) and low grain protein (Loumai24) wheat cultivars under two N levels (0.05 and 0.15 g N kg⁻¹ soil). High nitrogen (HN) resulted in significant increases in GS1 and GS2 expression at 10 days after anthesis (DAA), and higher GS activity during the entire grain filling stage. HN also significantly increased yield, grain protein content and protein fraction (except for glutenin of Luomai24) in two wheat cultivars, which indicated that it increased grain yield and protein content by improving nitrogen metabolism. Wanmai16 showed higher grain protein content, gliadin and glutenin content, and had higher expression level of GS2 both in flag leaves and grains at early grain filling stage. However, Luomai24 had greater yield and higher expression level of GS1. The difference expression of GS2 and GS1 genes indicates they had various contributions to the accumulation of protein and starch in wheat grains, respectively. The results suggest that GS2 would be serving as a potential breeding target for improving wheat quality.     

Effect of Pichia membranaefaciens on ROS metabolism and postharvest disease control in citrus fruit

The yeast Pichia membranaefaciens has antagonistic effects against a wide range of phytopathogenic fungi that cause postharvest fruit decay. This work evaluated the effects of P. membranaefaciens on the reactive oxygen species (ROS) metabolism and disease control in harvested citrus fruit (Citrus sinensis L. Osbeck). The lesion diameter caused by Penicillium italicum and Penicillium digitatum on citrus fruit was remarkably reduced when the fruit was point-inoculated or dipped in a suspension of P. membranaefaciens at 1 × 10⁸ CFU mL⁻¹. The application of P. membranaefaciens on citrus fruit enhanced the activity of superoxide dismutase, ascorbate peroxidase, and glutathione reductase, as well as the levels of hydrogen peroxide, the superoxide anion and glutathione, but inhibited the decreasing ascorbic acid content. Furthermore, catalase activity was decreased by the same treatment. These results indicated that yeast treatment induced the synthesis of antioxidant enzymes which might have antagonistic effects against postharvest green and blue mold infection in citrus fruit.     

Quinoa (Chenopodium quinoa Willd.) protein hydrolysates with in vitro dipeptidyl peptidase IV (DPP-IV) inhibitory and antioxidant properties

The potential of quinoa to act as a source of dipeptidyl peptidase IV (DPP-IV) inhibitory and antioxidant peptides was studied. A quinoa protein isolate (QPI) with a purity of 40.73 ± 0.90% was prepared. The QPI was hydrolysed at 50 °C for 3 h with two enzyme preparations: papain (P) and a microbial papain-like enzyme (PL) to yield quinoa protein hydrolysates (QPHs). The hydrolysates were evaluated for their DPP-IV inhibitory and oxygen radical absorbance capacity (ORAC) activities. Protein hydrolysis was observed in the QPI control, possibly due to the activity of quinoa endogenous proteinases. The QPI control had significantly higher DPP-IV half maximal inhibitory concentrations (IC₅₀) and lower ORAC values than QPH-P and QPH-PL (P < 0.05). Both QPH-P and QPH-PL had similar DPP-IV IC₅₀ and ORAC values. QPH-P had a DPP-IV IC₅₀ value of 0.88 ± 0.05 mg mL⁻¹ and an ORAC activity of 501.60 ± 77.34 μmol Trolox equivalent (T.E.) g⁻¹. To our understanding, this is the first study demonstrating the in vitro DPP-IV inhibitory properties of quinoa protein hydrolysates. QPHs may have potential as functional ingredients with serum glucose lowering properties.     

Predicted truly absorbed protein supply to dairy cattle from hulless barley (Hordeum vulgare L.) with altered carbohydrate traits with multi-year samples

Hulless barley breeding lines varying in amylose (1–20% DM) and β-glucan content (5–10% DM) have been developed at the Crop Development Centre, Canada. The objectives of this large-scale study were to 1) determine and confirm the effect of these new hulless barley lines (zero-amylose waxy, CDC Fibar; 5%-amylose waxy, CDC Rattan; normal-amylose, CDC McGwire and high-amylose, HB08302) with altered carbohydrate traits on 1) metabolic characteristics of protein; 2) intestinal digestion of various nutrients and 3) modeling nutrient supply from these barley varieties by using NRC Dairy 2001 model and DVE/OEB system. CDC Copeland was included as a hulled barley control. Among the hulless barley lines, CDC Fibar contained the highest and CDC McGwire contained the lowest total digestible protein (TDP: 147 vs. 116 g/kg DM). HB08302 was greater (P < 0.05) in intestinal digestible protein (IDP: 40.6% RUP) but relatively lower (P < 0.05) in total digestible protein (TDP: 120 g/kg DM). Compared with hulless barley, hulled barley showed relatively lower (P < 0.05) intestinal digestible protein (38 vs. 53 g/kg DM) and total digestible protein (102 vs. 129 g/kg DM). In modeling nutrient supply from the DVE/OEB system, the results showed hulled barley was lower (P < 0.01) in true protein supplied to the small intestine (TPSI: 127 vs. 142 g/kg DM), lower in truly absorbed rumen bypassed feed protein in small intestine (ABCP^DVE: 43 vs. 58 g/kg DM), lower in truly absorbed protein in the small intestine (DVE: 95 vs. 111 g/kg DM), and lower in degraded protein balance (OEB^DVE: −39 vs. −23 g/kg DM) than the hulless barley lines but greater (P < 0.01) in undigested inorganic matter (9 g/kg DM). From NRC Dairy 2001 model, CDC Fibar was greater (P < 0.05) in degraded protein balance (OEB^NRC: −30 g/kg DM) and metabolizable protein (MP: 118 g/kg DM) than the other hulless barley lines, while hulled barley was relatively lower (P < 0.01) in total metabolizable protein (MP: 83 vs. 105 g/kg DM). Our correlation results suggested that TDP was negatively correlated to amylose (r = −0.85, P < 0.001) but positively correlated to β-glucan level (r = 0.74, P < 0.001) in hulless barley cultivars. The DVE and OEB^DVE as well as MP were negatively correlated (P < 0.05) to amylose level but positively correlated to β-glucan level (P < 0.05). In conclusion, altered carbohydrate traits in the hulless barley varieties have the potential to increase intestinal nutrient availability to ruminants and significantly improved the truly absorbed protein supply to dairy cattle compared to hulled barley. Hulless barley with lower amylose and higher β-glucan level could provide greater (P < 0.05) truly digested protein in the small intestine, better synchronized available energy and N and increase metabolizable protein supply to ruminants.     

Utilizing management zones for Rotylenchulus reniformis in cotton: Effects on nematode levels,crop damage,and Pasteuria sp.

Nematode management zones (MZs) based on soil electrical conductivity (EC, a proxy for soil texture) have not been published for Rotylenchulus reniformis. We tested 1) whether R. reniformis levels and the amount of damage caused to cotton differed among MZs, 2) if the relative effectiveness of nematicides differed among MZs, and 3) whether the prevalence of Pasteuria sp. on R. reniformis differed among MZs and nematicide treatments. A field was divided into three MZs where MZ3 had sandier soil than MZ1 or MZ2, which were the same, and MZ2 had higher elevation than MZ1 or MZ3, which were the same. Levels of R. reniformis near planting in plots not receiving nematicide averaged 1342 (per 150 cm³ soil) in 2008, 610 in 2009, and 869 in 2010. Both soil texture and elevation influenced R. reniformis population levels with greater reproduction in finer-textured soil and reduced R. reniformis levels at higher elevation. Treatment effects on R. reniformis levels were the same in all MZs (no MZ × treatment interactions). The effects of texture and elevation on yield were similar to the effects on nematode levels. We observed endospores of Pasteuria sp., a bacterial parasite of nematodes, on R. reniformis at the field site used for this study. Pasteuria sp. generally had greater spore attachment to juvenile R. reniformis than to adults with no differences among MZs in percentage of nematodes with endospores, but the number of spores per nematode was lower in MZ3, which had the greatest sand content. The percentage of R. reniformis with endospores and the number of attached endospores were reduced by 1,3-dichloropropene + aldicarb. We documented that R. reniformis levels are affected by modest differences in soil texture and elevation, but levels of R. reniformis were above the action threshold in all MZs, therefore a uniform rate of nematicide would have been recommended and there would have been no cost savings from utilizing MZs in this field.     

Combined mutations in five wheat STARCH BRANCHING ENZYME II genes improve resistant starch but affect grain yield and bread-making quality

Increases in the proportion of amylose in the starch of wheat grains result in higher levels of resistant starch, a fermentable dietary fiber associated with human health benefits. The objective of this study was to assess the effect of combined mutations in five STARCH BRANCHING ENZYME II (SBEII) genes on starch composition, grain yield and bread-making quality in two hexaploid wheat varieties. Significantly higher amylose (∼60%) and resistant starch content (10-fold) was detected in the SBEII mutants than in the wild-type controls. Mutant lines showed a significant decrease in total starch (6%), kernel weight (3%) and total grain yield (6%). Effects of the mutations in bread-making quality included increases in grain hardness, starch damage, water absorption and flour protein content; and reductions in flour extraction, farinograph development and stability times, starch viscosity, and loaf volume. Several traits showed significant interactions between genotypes, varieties, and environments, suggesting that some of the negative impacts of the combined SBEII mutations can be ameliorated by adequate selection of genetic background and growing location. The deployment of wheat varieties with increased resistant starch will likely require economic incentives to compensate growers and millers for the significant reductions detected in grain and flour yields.     

Influence of allelic prolamin variation and localities on durum wheat quality

Thirty-seven varieties of a Mediterranean durum wheat collection grown in Tunisia and Spain were analysed for their allelic composition in prolamins, as well as their protein concentration, sodium dodecyl sulphate sedimentation (SDSS) test and mixograph parameters. Genotype was a greater source of variation in all measurements than locality. Uncommon high and low molecular glutenin subunits (HMW-GS and LMW-GS) were found (V and 2•• subunits at Glu-A1, 13 + 16 at Glu-B1, 5* subunit and ax allele at Glu-A3). The rare combinations 2 + 4+14 + 18 and 8 + 9+13 + 16+18 subunits at the Glu-B3 locus were found. Glu-A3ax had a positive influence on SDSS and mixograph parameters. Of all the prolamins, those that have the B-LMW-GS composition aaa (for Glu-A3, Glu-B3 and Glu-B2 loci, respectively), when associated with the Glu-A1c and Glu-B1d gave the best semolina quality. By contrast, semolina quality is poor when this same composition is associated with the Glu-A1c and Glu-B1e and even poorer when associated with the Glu-A1c and Glu-B1f. In addition, the cultivars with B-LMW-GS allelic composition aab (for Glu-A3, Glu-B3 and Glu-B2 loci, respectively), when associated with the Glu-A1c and Glu-B1d, gave high quality, whereas when associated with the Glu-A1c and Glu-B1e or with Glu-A1o and Glu-B1f, the quality was very poor.     

Real-time quantitative PCR based method for the quantification of fungal biomass to discriminate quantitative resistance in barley and wheat genotypes to fusarium head blight

Fusarium head blight (FHB) caused by Fusarium graminearum is one of the devastating diseases of small grain crops, including barley and wheat. Breeding for resistance is one of the best and ecofriendly strategies to manage the FHB. However, the existing methods used for screening genotypes, both under field and greenhouse conditions, often resulted in high experimental error, leading to inconsistent ranking of genotypes over years. In the postgenomic era, precise assessment of resistance is crucial to identify candidate genes. Here, we report a pathogen inoculation procedure and a real-time quantitative polymerase chain reaction (qPCR) based protocol for the quantification and discrimination of quantitative resistance among barley and wheat genotypes to FHB. Using Fusarium specific primer pair Tri6_10, for the trichothecene biosynthetic cluster (Tri6) gene, we successfully quantified the relative fungal biomass in both spikelets and rachis. A qPCR of spikelets and rachis collected on 6 dpi, from inoculated three alternate spikelet regions, discriminated resistance with less experimental error than those based on the proportion of spikelets diseased (PSD) at 9 dpi. This method can be applied for medium to high-throughput barley and wheat breeding programmes to discriminate quantitative resistance among genotypes against FHB.     

Breeding for increased grain protein and micronutrient content in wheat: Ten years of the GPC-B1 gene

To provide food and nutrition security for a growing world population, continued improvements in the yield and nutritional quality of agricultural crops will be required. Wheat is an important source of calories, protein and micronutrients and is thus a priority to breed for improvements in these traits. The GRAIN PROTEIN CONTENT-B1 (GPC-B1) gene is a positive regulator of nutrient translocation which increases protein, iron and zinc concentration in the wheat grain. In the ten years since it was cloned, the impacts of GPC-B1 allelic variation on quality and yield traits have been extensively analyzed in diverse genetic backgrounds in field studies spanning forty environments and seven countries. In this review, we compile data from twenty-five studies to summarize the impact of GPC-B1 allelic variation on fifty different traits. Taken together, the results demonstrate that the functional copy of the GPC-B1 gene is associated with consistent positive effects on grain protein, Fe and Zn content with only marginally negative impacts on yield. We conclude that the GPC-B1 gene has the potential to increase nutritional and end use quality in a wide range of modern cultivars and environments and discuss the possibilities for its application in wheat breeding.     

Genome-wide association mapping of starch granule size distribution in common wheat

Starch is a crucial component in wheat endosperm and plays an important role in processing quality. Endosperm of matured wheat grains contains two distinct starch granules (SG), referred to as larger A- and smaller B-granules. In the present study, 166 Chinese bread wheat cultivars planted in four environments were characterized for variation in SG size. A genome-wide association study (GWAS) using the 90 K SNP assay identified 23 loci for percentage volumes of A- and B-granules, and 25 loci for the ratio of A-/B-granules volumes, distributing on 15 chromosomes. Fifteen MTAs were associated with both the percentage volumes of A-, B-granules and the ratio of A-/B-granules volumes. MTAs IWB34623 and IWA3693 on chromosome 7A and IWB22624 and IWA4574 on chromosome 7B associated with the percentage volumes of A- and B-granules consistently identified in multiple environments were considered to be stable. Linear regression analysis showed a significantly negative correlation of the number of favorable alleles with the percentage volumes of A-granules and a significantly positive correlation between the number of favorable alleles and the percentage volumes of B-granules, respectively. The loci identified in this study and associated markers could provide basis for manipulating SG size to obtain superior noodle quality in wheat.