Biotic effects of climate change in urban environments: The case of the grey-headed flying-fox (Pteropus poliocephalus) in Melbourne, Australia

Urban climates are known to differ from those of the surrounding rural areas, as human activities in cities lead to changes in temperature, humidity and wind regimes. These changes can in turn affect the geographic distribution of species, the behaviour of animals and the phenology of plants. The grey-headed flying-fox (Pteropus poliocephalus) is a large, nomadic bat from eastern Australia that roosts in large colonies known as camps. Historically a warm temperate to tropical species, P. poliocephalus recently established a year-round camp in the Royal Botanic Gardens Melbourne. Using a bioclimatic analysis, we demonstrated that on the basis of long-term data, Melbourne does not fall within the climatic range of other P. poliocephalus camp sites in Australia. Melbourne is drier than other summer camps, and cooler and drier than other winter camps. The city also receives less radiation, in winter and annually, than the other summer and winter camps of P. poliocephalus. However, we found that temperatures in central Melbourne have been increasing since the 1950s, leading to warmer conditions and a reduction in the number of frosts. In addition, artificial watering of parks and gardens in the city may contribute the equivalent of 590 mm (95% CI: 450-720 mm) of extra rainfall per year. It appears that human activities have increased temperatures and effective precipitation in central Melbourne, creating a more suitable climate for camps of the grey-headed flying-fox. As demonstrated by this example, anthropogenic climate change is likely to complicate further the task of conserving biological diversity in urban environments.     

Changes in food resources and conservation of scarab beetles: from sheep to dog dung in a green urban area of Rome (Coleoptera, Scarabaeoidea)

The aim of the research was to show how a change in land use influences the structure of a dung beetle assemblage and affect its conservation. In the Pineto Urban Regional Park (Rome), dog dung is the sole food resource currently available for scarab dung beetles, after the recent removal of wild and domestic herbivores. A one-year sampling was conducted to study the scarab assemblage in dog scats (1999) and to compare it with the previous assemblage associated with sheep droppings (1986). Richness, evenness and similarity parameters were compared between the two allochronic assemblages. From sheep to dog dung, an impoverishment of the total richness was observed (from 19 to 9 species) together with an increase of individuals (by 7 times). Dog dung harboured 20% of the current scarab dung beetle fauna of Rome, probably as a consequence of the dog mixed diet, rich in cellulose. Both the communities showed a high percentage of tunnellers, probably because of the food shortage and, for dog scats, of the high dehydration rate. A comparison with other Roman scarab communities enhanced that: (1) the change in food resource determined a higher difference in species composition respect to other parameters (size and habitat diversity); (2) dog dung provided a temporary refuge for species that otherwise may encounter local extinction in urban environments.     

Reconstructing the soil food web of a 100 million-year-old forest: The case of the mid-Cretaceous fossils in the amber of Charentes (SW France)

Over the past decade, the mid-Cretaceous amber deposits of Charentes (SW France) have been intensively studied. The fossils investigated were not only limited to arthropods preserved in amber, but also included microorganisms, plant debris and vertebrate remains. This plethora of analyses provided important data about the ecology of the overall system, including sources of litter input into the soil and of the above-ground ecology. More precisely, they showed that most of the microfossils were those of soil organisms or organisms that participated in the ecology of the forest soil. This new discovery provided the opportunity to study the ecology of the soil as preserved in the 100 million years old Charentes amber. Indeed, the trophic links of the fossil forest soil have been reconstructed on the basis of the fossil assemblage discovered in amber outcrops and overlayed on a model ecological forest soil food web. We relied on existing phylogenetic information to discuss the absence of certain taxonomic groups in the fossilized specimens. Our synthesis shows that although the organisms of this ancient forest of Charentes were different from those of modern soils, the soil food web was organized functionally the same as modern soils. It also demonstrated that trophic links of the soil community were already diverse, including various means of predation, parasitism and organic matter decomposition. The most obvious differences are the absence of evidence for symbiotic root nitrogen fixation and mycorrhizae.     

Reducing the rate of predation on wildlife by pet cats: The efficacy and practicability of collar-mounted pounce protectors

We evaluated whether a collar-worn pounce protector, the CatBib™, reduces the number of vertebrates caught by pet cats and whether its effectiveness was influenced by colour or adding a bell. Fifty-six cats identified as hunters were studied in Perth, Australia over six weeks in November/December 2005 (southern hemisphere spring/summer). Cats spent three weeks wearing a device and three weeks without it and we recorded the number of prey brought home during each period.Cats caught 65 birds (13 species), 67 herpetofauna (11 species) and 164 mammals (five species). Alone or together with bells CatBibs stopped 81% of cats from catching birds, 33% from catching herpetofauna and 45% from catching mammals. Cats wearing CatBibs or CatBibs and bells caught only 25% of all birds, 43% of all herpetofauna and 36% of all mammals captured. Both colours were equally effective. Adding bells conferred no additional protection. Only one cat did not adjust to the CatBib and there was no long-term evidence that CatBibs altered cats’ fighting or wandering behaviour.Owners volunteered because of one or more of: environmental concern (81%), curiosity (38%), personal (35%) or family (24%) distress caused by hunting. Most owners (70%) said they would continue to use CatBibs although only 17% were doing so eight months later because some cats had stopped hunting or lost their CatBibs. Although confinement of pet cats is the complete solution to preventing predation on wildlife, deterrents such as the CatBib are effective if used consistently.     

Assessing the effects of a highway on a threatened species using Before–During–After and Before–During–After-Control–Impact designs

Due to the growing awareness of potential impacts of roads, managers demand well-designed studies about the implications of linear infrastructures on ecosystems. We illustrate the application of Before–During–After and Before–During–After-Control–Impact designs (BDA and BDACI) to assess effects of highway construction and operation using a population of great bustards (Otis tarda) as a model. Based on a time series of demographic and distribution data (1997–2009), we developed generalized additive models and classification trees to test the effect of road distance on bustard distribution, identify road-effect distances and explore the seasonality of these effects. Two control zones were selected to test the changes between construction phases on productivity, and population trends using TRIM models. From the start of the road construction, great bustards tended to avoid close proximity to the highway (ca. 560–750 m threshold distance). The exclusion band was narrower during the breeding season. In addition, family groups were less tolerant to highway operation disturbances, as shown by their higher distance effect (ca. 1300 m). Population trends did not differ between impact and control zones during the construction. However, once the highway was in operation, bustard numbers declined gradually up to 50% in the impact zone, remained stable in the closest control zone, and increased in the zone located at the greatest distance from the highway. The effects on density of family groups were less evident. Our approach provides information relevant to great bustard conservation and suggests methods for obtaining information of interest to road managers, that could be applied to linear infrastructures with others species.     

An archaeopedological and phytolitarian study of the “Dark Earth” on the site of Rue de Dinant (Brussels, Belgium)

During the excavations of the site of Rue de Dinant in the historic centre of Brussels (Belgium), remains of the first city wall dating from the 13th century have been discovered. Intra muros thick dark sediment units predating this wall are observed. These dark units are among the oldest occupation traces so far encountered in this higher, eastern, part of the historic centre of Brussels. In order to characterise them, and to understand the human activities and natural processes behind their formation, an interdisciplinary research, integrating archaeopedology and phytolith study, has been undertaken. This approach permitted us to identify a range of natural and cultural processes leading to the formation of these dark layers, and to characterise different activities. Remains of a hearth, old plough land (cropfields) and grassland have been identified, all activities referring to a rural landscape organisation. Later on, the area changes into an enormous silt extraction area, whereby Dark Earth is thrown into the dug pits. Finally, the construction of the first city wall marks the area as becoming part of the city. The study of Dark Earth shows to be a potentially valuable tool to shed light on the development and spatial organisation of pre-urban Brussels, a historically very poorly documented period.     

Assessing the effects of marine protected area (MPA) on a reef fish assemblage in a northwestern Mediterranean marine reserve: Identifying community-based indicators

Marine protected areas (MPAs) are increasingly envisaged as a tool to manage coastal ecosystems and fisheries. Assessment of their performance with respect to management objectives is therefore important. A number of MPAs provided conservation benefits for fished species. Observed benefits do not apply to all species at all times, and responses to protection are also highly variable among fish taxa. Among the many empirical studies on marine reserves, only a few designs considered ‘before and after data’ and spatial variation. In this paper, we are interested in assessing the effect of a no-take reserve on the reef fish assemblage in a northwestern Mediterranean example. Data were obtained from a three-year survey using underwater visual censuses (UVC), before and after MPA establishment. Permutational multivariate analysis of variance (PERMANOVA) and multivariate regression trees (MRT) were used to evaluate the effects of reserve protection on the reef fish assemblage, while accounting for habitat. Modelled biological responses were abundances and diversity indices calculated at different levels of the assemblage. Significant effects were found for many of these metrics. In addition to PERMANOVA, univariate models provided more insight into the magnitude and direction of effects. The most sensitive metrics were related to large species and species targeted by fishing. These results may be used to choose the metrics that are more suitable as community-based indicators of MPA impact in the perspective of monitoring programs.     

A mycorrhizal pathogen (Glomus macrocarpum Tul. & Tul.) of tobacco: effects of long- and short-term cropping on the mycorrhizal fungal community and stunt disease

A crop rotation experiment was conducted on two adjacent tracts of land differing in long-term croppin history (30 year in tall fescue pasture or 3 year in sorghum-sudangrass hybrid (SSGH).. Short-term crops were 2 years in tobacco or low-endophyte (Acremonium coenophialum Morgan-Jones & Gams) tall fescue. Tobacco was grown on all plots in Year 3, and data relating mycorrhizal stunt disease of tobacco and populations of the stunt pathogen, Glomus macrocarpum Tul. & Tul., and of other members of the mycorrhizal fungal community, were taken. Disease incidence was highest with SSGH-tobacco and lowest with fescue-fescue, the other two combinations being intermediate. Mycorrhizal colonization was related to disease occurence. At the beginning of the season, populations of G. macrocarpum were equally high in land with a long-term history of SSGH, regardless of its short-term history; but at the end of the season, populations of G. macrocarpum among the four treatments were proportional to the incidence of disease. Populations of four mycorrhizal fungal species which were high in land with a short-term history of fescue were depressed by production of tobacco. Monocropping of tobacco appeared to narrow the diversity of the mycorrhizal fungal community and increased the proportion which is pathogenic, the overall result being lower productivity of soil for tobacco. Crop rotation of tobacco with fescue decreased the proportion of the mycorrhizal fungal community which is pathogenic and maintained productivity of soil for tobacco.     

Plant genetic resources in a touristic island: the case of Lefkada (Ionian Islands, Greece)

Lefkada is one of the islands of the Ionian Sea and disposes interesting biodiversity both in crop landraces and in wild relatives. It is also one of the most famous touristic attractions in the Eastern Mediterranean basin, thus traditional agriculture is under great pressure from tourism. Nevertheless, Lefkada’s mountainous relief has apparently preserved some diversity of landraces in upland villages. A collecting expedition was organized in September 2010 and a second (minor) in 2012 in order to assess the current status of landraces in a touristic island such as Lefkada. The results are discussed and compared with previous expeditions in the island. Landraces still cultivated, others that are considered lost, and information about their traditional uses are presented. Finally, the potential for the exploitation of landraces in Lefkada’s touristic environment is discussed.     

Analysis of the biodiversity of hawthorn (<Emphasis Type="Italic">Crataegus</Emphasis> spp.) from the morphological,molecular, and ethnobotanical approaches,and implications for genetic resource conservation in scenery of increasing cultivation: the case of Mexico

One hundred and forty Mexican hawthorn (Crataegus spp.) accessions from six regions are preserved at the BGT-UACH germplasm bank (Mexico), comprising the most comprehensive living collection of Mexican hawthorns with different degrees of human management. The objective of this study was to assess the biodiversity of this valuable collection from morphological, molecular (microsatellite), and ethnobotanical viewpoints in order to delineate the most adequate strategy for the conservation of the native hawthorn germplasm in the present scenario of incipient establishment of commercial hawthorn plantations, which is likely to increase. Molecular characterisation revealed that the biodiversity was chiefly (90%) placed within the regions. Morphological characterisation indicated that the group from Chiapas was the most different germplasm pool compared with the other five. This was confirmed by molecular analysis, because in spite of the lack of a phylogeographical pattern, two germplasm pools were detected: one composed mainly by accessions from Chiapas and the other mainly by accessions from the other regions. The only clear differences among the regions in the ethnobotanical study were those derived from putting hawthorns into commercial cultivation, which occurred in just one region in the centre of the country (Mexico–Puebla–Tlaxcala). As a consequence, an ex situ conservation programme is necessary for those regions shifting patterns of cultivation from traditional to commercial, regardless of whether other on-farm programmes are also implemented. The germplasm collections within each region must be exhaustive due to their high genetic diversity.     

Impact of ski pistes on soil properties: a case study from a mountainous area in the Mediterranean region

In this study, soils on 17 ski pistes in the Sierra Nevada, Spain, were investigated to identify changes induced by ski management practices and also to determine the effectiveness of grass seeding in restoring soil quality. When compared with unaffected reference soils, those of ski runs had substantial loss of organic carbon (?34%, ?11.9 ± 3.6 t ha^?1) and micropore volume and size (?33%, ?0.07 ± 0.01 cm³ cm^?3 and ?48%, ?1.62 ± 0.28 μm). Microstructure showed a dramatic reduction in organic cements and fungal hyphae. The organic content of soil seeded with grass significantly improved compared with soil not seeded or seeded unsuccessfully (P < 0.05), especially where the topsoil was reinstated. Organic C content, microporosity and soil respiration increased by 200% (+21 ± 5 t ha^?1), 70% (+0.07 ± 0.03 cm³ cm^?3) and 140% (+0.10 ± 0.04 mg CO₂ g^?1 day^?1), respectively. Average micropore size in aggregates which in undisturbed soils was 3.40 ± 0.28 μm reverted to 3.52 ± 0.36 μm. However, the microstructure of the revegetated soils did not attain the levels of organic cements and fungal hyphae in the natural soils. Dolomite and salts were added to the soil to aid slope stabilization, fertility and de‐icing of access tracks. As a consequence, there were increases in pH, exchangeable sodium percentage (ESP), electrical conductivity, calcium carbonate equivalent and base saturation. The influence of management on soil properties was found to be greater than that of environmental factors.     

Antifeedant effects of the limonoids from Entandrophragma candolei (Meliaceae) on the gram pod borer, Helicoverpa armigera (Lepidoptera: Noctuidae)

The biological activity of the limonoids prieurianin and epoxyprieurianin isolated from Entandrophragma candolei (Harms) (Meliaceae) and their respective acetates was assessed using the gram pod borer, Helicoverpa armigera (Hubner) (Lepidoptera: Noctuidae). The compounds exhibited strong antifeedant activity in a diet choice bioassay with epoxyprieurianin acetate being most effective with 48.3 ppm deterring feeding by 50% (DI50) and prieurianin the least effective (DI50 = 91.4 ppm). The effect on growth of larvae was concomitant with the reduced feeding by neonate and third instar larvae. In nutritional assays, all the compounds reduced growth and consumption when fed to larvae without any effect on efficiency of conversion of ingested food (ECI), suggesting antifeedant activity alone. No toxicity was observed nor was there any significant affect on nutritional indices following topical application, further suggesting that prieurianin-type limonoids act specifically as feeding deterrents.     

Strong effects of a plantation with Pinus patula on Andean subpáramo vegetation: a case study from Colombia

The effect of a pine plantation on a native subpáramo system in the Andes of Colombia (3100 m above sea level) was studied. The vegetation of an 8 year-old plantation with Pinus patula was compared to that of the surrounding native subpáramo. 59 plots made in the subpáramo vegetation contained 121 vascular plant species. These plots were classified into three subpáramo communities and one Andean scrub community. Sixty-four plots made in the pine plantation contained 76 vascular plant species and were subdivided into four classes of pine cover. With increasing pine cover, pine plantation plots tended to become less similar to the subpáramo communities. Habitat-specific subpáramo species tended to disappear with increasing pine cover. After controlling for the effects of environmental variables in a partial canonical correspondence analysis, pine cover had a significant impact on plant species patterns. It is concluded that afforestation with Pinus patula resulted in strong negative effects on diversity and composition of the subpáramo vegetation at the study site.     

Beaver (Castor canadensis) mitigate the effects of climate on the area of open water in boreal wetlands in western Canada

Shallow open water wetlands provide critical habitat for numerous species, yet they have become increasingly vulnerable to drought and warming temperatures and are often reduced in size and depth or disappear during drought. We examined how temperature, precipitation and beaver (Castor canadensis) activity influenced the area of open water in wetlands over a 54-year period in the mixed-wood boreal region of east-central Alberta, Canada. This entire glacial landscape with intermittently connected drainage patterns and shallow wetland lakes with few streams lost all beaver in the 19th century, with beaver returning to the study area in 1954. We assessed the area of open water in wetlands using 12 aerial photo mosaics from 1948 to 2002, which covered wet and dry periods, when beaver were absent on the landscape to a time when they had become well established. The number of active beaver lodges explained over 80% of the variability in the area of open water during that period. Temperature, precipitation and climatic variables were much less important than beaver in maintaining open water areas. In addition, during wet and dry years, the presence of beaver was associated with a 9-fold increase in open water area when compared to a period when beaver were absent from those same sites. Thus, beaver have a dramatic influence on the creation and maintenance of wetlands even during extreme drought. Given the important role of beaver in wetland preservation and in light of a drying climate in this region, their removal should be considered a wetland disturbance that should be avoided.     

The anatomy of a (potential) disaster: Volcanoes, behavior, and population viability of the short-tailed albatross (Phoebastria albatrus)

Catastrophic events, either from natural (e.g., hurricane) or human-induced (e.g., forest clear-cut) processes, are a well-known threat to wild populations. However, our lack of knowledge about population-level effects of catastrophic events has inhibited the careful examination of how catastrophes affect population growth and persistence. For the critically endangered short-tailed albatross (Phoebastria albatrus), episodic volcanic eruptions are considered a serious catastrophic threat since approximately 80% of the global population of ∼2500 birds (in 2006) currently breeds on an active volcano, Torishima Island. We evaluated how short-tailed albatross population persistence is affected by the catastrophic threat of a volcanic eruption relative to chronic threats. We also provide an example for overcoming the seemingly overwhelming problems created by modelling the population dynamics of a species with limited demographic data by incorporating uncertainty in our analysis. As such, we constructed a stochastic age-based matrix model that incorporated both catastrophic mortality due to volcanic eruptions and chronic mortality from several potential sources (e.g., contaminant exposure, fisheries bycatch) to determine the relative effects of these two types of threats on short-tailed albatross population growth and persistence. Modest increases (1%) in chronic (annual) mortality had a 2.5-fold greater effect on predicted short-tailed albatross stochastic population growth rate (lambda) than did the occurrence of periodic volcanic eruptions that follow historic eruption frequencies (annual probability of eruption 2.2%). Our work demonstrates that periodic catastrophic volcanic eruptions, despite their dramatic nature, are less likely to affect the population viability and recovery of short-tailed albatross than low-level chronic mortality.     

Indigenous collaborative research for wildlife management in Amazonia: The case of the Kaxinawá, Acre, Brazil

Wildlife is a critical food resource throughout Amazonia. Consequently, adaptive management based on continued resource evaluation is essential to ensure long-term sustainable use of Amazonian wildlife. Since 1996, the Kaxinawá people of Western Amazonia have participated in a capacity-building program focused on natural resource management leading to the development of a territorial management plan that includes monitoring of wildlife use. In this study, we report the results of collaborative management-oriented research where hypotheses designed by the Kaxinawá about game availability within their territory were supported by the analysis of self-monitoring hunting data collected through a methodology designed in collaboration with conservation biologists. Results support Kaxinawá hypotheses that: (1) there is variation of game availability among villages in Kaxinawá territory; (2) preferred game species are more available to those villages closest to the isolated headwaters; and (3) previous land and wildlife use, present density of villages, and human population density are the main factors causing observed variations of game availability. The results of this study suggest the relevance and value of long-term participatory studies to complement short-terms academic studies of biodiversity and natural resource use and management.