Genotyping of the <Emphasis Type="Italic">SiDREB2</Emphasis> gene in worldwide foxtail millet (<Emphasis Type="Italic">Setaria italica</Emphasis> (L.) P. Beauv.) genetic resources with special attention to Indian landraces

We genotyped Setaria italica Dehydration-responsive element-binding 2 (SiDREB2) gene, which had been reported to be associated with dehydration stress tolerance, in 588 accessions of foxtail millet from various parts of Eurasia and other regions by a dCAPS marker. Of these, 480 accessions were genotyped in ribosomal DNA (rDNA), polyphenol oxidase (PPO) gene and Heading date 1 (HD1) gene in our previous studies, and 108 accessions from India were newly used in this study and genotyped in these genes in addition to the SiDREB2 gene. We compared the geographical distribution of the SiDREB2 genotypes with that of these three genes. Accessions from countries in South Asia including India and Sri Lanka were the most variable in the SiDREB2 gene followed by Korean accessions and Japanese accessions, suggesting that Indian accessions and East Asian accessions are useful as genetic resources for dehydration stress tolerance. This study also showed that although Indian accessions are not so diverse in rDNA and in transposon display markers previously studied, they are diverse in adaptive genes such as SiDREB2, PPO and HD1 genes.     

Different Forms of Potassium and Their Contributions toward Potassium Uptake under Long-Term Maize (Zea mays L.)–Wheat (Triticum aestivum L.)–Cowpea (Vigna unguiculata L.) Rotation on an Inceptisol

In a long-term fertilizer experiment at the Indian Agricultural Research Institute, New Delhi, with maize, wheat, and cowpea, various forms of potassium (K) and their contribution toward K uptake were found to be affected by fertilizer use and intensive cropping. The treatments included for the study were a control, 100% nitrogen (N), 100% N–phosphorus (P), 50% NPK, 100% NPK, 100% NPK + farmyard manure (FYM at 15 t ha^?1 to maize only), and 150% NPK. The concentration of nonexchangeable K was greatest, followed by exchangeable K and water-soluble K. The study revealed no significant change in water-soluble K concentration in surface soil compared to N, NP, and control, indicating existence of an equilibrium between different K forms. Application of 100% NPK significantly increased water-soluble K concentration in surface soil compared to N, NP, and control treatments after maize, wheat, and cowpea. Application of NPK + FYM and 150% NPK resulted in greater quantities of all the K forms as compared to other treatments. Among the three forms, water-soluble K contributed predominantly to K uptake by maize and wheat; however, nonexchangeable K contributed significantly to K uptake by cowpea.     

Effect of different safflower (Carthamus tinctorius L.)–bean (Phaseolus vulgaris L.) intercropping patterns on growth and yield under weedy and weed-free conditions

Two field experiments were carried out over two consecutive years (2010–2011) in the research field of the College of Agriculture, Shiraz University, Fars Province, southern Iran. The study was a factorial experiment based on a randomized complete block design with three replications: the first factor was the ratio of safflower (Carthamus tinctorius L. Pi cv.) to bean (Phaseolus vulgaris L. Saiad cv.) at five levels (safflower and bean sole cropping, and intercropping of safflower and bean at ratios of 1:3, 2:2 and 3:1); and the second factor was weed management at two levels: weed-free (complete weed control) and weedy (no weed control). The results showed that an intercropping system was the most appropriate method for decreasing the adverse effect of weeds on the performance of both crops. Intercropping was more suitable for weedy than weed-free conditions. According to the land equivalent ratio (LER) value, if the main crop was bean, the best intercropping treatment was one row of safflower and six rows of bean (S₁B₃) under both weedy and weed-free conditions. By contrast, if the main crop was safflower, the best treatment under weedy conditions was S₁B₃, whereas under weed-free conditions the best treatment was two rows of safflower and four rows of bean (S₂B₂). Overall, S₁B₃ can be introduced as the best intercropping method.     

Influence of Inorganic Phosphorus,VAM Fungi,and Irrigation Regimes on Crop Productivity and Phosphorus Transformations in Okra (Abelmoschus esculentus L.)–Pea (Pisum sativum L.) Cropping System in an Acid Alfisol

The present investigation was carried out at CSK Himachal Pradesh Agricultural University, Palampur, India, during 2009–2011 to economize inorganic phosphorus (P) and water needs of an okra (Abelmoschus esculentus)–pea (Pisum sativum) cropping system through vesicular arbuscular mycorrhizal (VAM) fungi (Glomus mosseae) in a Himalayan acid Alfisol. The field experiment was replicated three times in a randomized block design comprising 14 treatments consisting of 12 treatment combinations of two VAM levels [0 and 12 kg ha^?1], three phosphorus levels [50, 75, and 100% of recommended soil-test-based nitrogen (N)–P–potassium (K)], and two irrigation regimes [40 and 80% of available water-holding capacity of field soil (AWC)], in addition to one treatment with “generalized recommended NPK dose with generalized recommended irrigations (GRD)” and one treatment based on “farmers’ practice of plant nutrition and irrigation management in the region.” This article presents crop productivity and P dynamics studies during the second crop cycle of okra–pea sequence (2010–2011) and statuses of different P fractions in the soil after the second pea crop harvest during 2010–2011. Crop productivity and P uptake data in okra–pea sequence indicated that application of VAM + 75% P dose at either of two irrigation regimes did not differ significantly than GRD treatment and VAM + 100% P dose. It suggests an economy of about 25% inorganic P dose through VAM fungi. The treatments imbedded with VAM inoculation enhanced the P uptake in okra–pea system, on an average by 21% over the GRD and non-VAM-inoculated counterparts. Further, integrated application of P, VAM, and irrigation regimes evaluated in okra–pea sequence for 2 years led to greater status of water-soluble P (21%), sodium bicarbonate (NaHCO₃)–inorganic phosphorus (Pi) (11%), sodium hydroxide (NaOH)–Pi (9%), hydrochloric acid (HCl)–extractable–P (20%) over non-VAM-inoculated counterparts and low status of organic P (NaHCO₃-P_o and NaOH-P_o), all of which appreciably contributed to available P supply to plants in the present study in an acid Alfisol. The correlation coefficient reveals that contribution of inorganic P forms is highly correlated to crop productivity and total P uptake in okra and pea crops besides soil available P in the present study. Overall, it is concluded that VAM inoculation in okra–pea cropping system significantly enhanced the P availability to plants by way of enriching the labile-P pool such as water-soluble P and P loosely bound to aluminium (Al-P) and iron (Fe-P) on adsorption complexes and by P mineralization from organic matter in an Himalayan acid Alfisol.     

Impact of organic and inorganic nutrition on soil–plant nutrient balance in arecanut (Areca catechu L.) on a laterite soil

The study assessed the impact of continuous application of vermicompost and chemical fertilizers nitrogen, phosphorus and potassium (NPK) on arecanut in India. Key parameters examined were biomass production, nutrient uptake, yield, soil fertility and net benefit. Pooled analysis of 8-year data revealed that nutrient application registered significantly higher yield (2585–3331 kg ha^?1) than no nutrition (1827 kg ha^?1). Yields in organic nutrition were around 85% of the yields obtained in inorganic NPK. The concentrations of leaf N and K were significantly higher with NPK than with vermicompost. Vermicompost significantly increased soil organic carbon and the availability of calcium (Ca), magnesium (Mg), manganese (Mn) and copper (Cu), but reduced exchangeable K in soil. The total uptake of K and Ca together contributed positively to 75% variability in total biomass production. Nutrient removal of iron (Fe), P, K and Cu positively influenced the yield with about 81% variability. Biomass partitioning and nutrient uptake pattern are important for fertilization program of arecanut.     

Rhizobia in tropical legumes—VII. Effectiveness of different isolates on Psophocarpus tetragonolobus (L.) DC

Rhizobia isolated from fourteen different genera of legumes were tested for their N-fixing effectiveness with Psophocarpus tetragonolobus in standard Leonard jar trials. Isolates from all plants except Pithecellobium jiringa were able to form nodules with P. tetragonolobus although a wide range of effectiveness amongst the different rhizobia was demonstrated. Thus P. tetragonolobus may be considered promiscuous with respect to its rhizobial requirements. Based on this experiment, a group of rhizobia comprising three elite strains (RRIM 56 from P. tetragonolobus, UMKL 36 from Lablab purpureus and CB 756 from Macrotyloma africanum, a moderately effective strain (NGR 258 from P. tetragonolobus), and two strains of low effectivity (RRIM 968 from Centrosema pubescens and UMKL 12 from Phaselus angularis) were selected for further study. When these were used to inoculate P. tetragonolubus growing in soil taken from virgin jungle (less than 1.54 rhizobia g^?1 soil); RRIM 56 and UMKL 36 again performed well, but NGR 258 outperformed CB 756.     

Effects of benomyl on vesicular‐arbuscular mycorrhizal infection of red clover (Trifolium pratense L.) and consequences for phosphorus inflow.

The roots of red clover plants inoculated with the vesicular‐arbuscular mycorrhizal fungus Glomus clarus Nicolson & Schenck were treated with a drench of benomyl at a time when mycorrhizal infection was already well established. Benomyl halted further infection and reduced phosphorus inflow by one order of magnitude compared to untreated controls. The fungicide also decreased the rate of plant growth probably as a consequence of reduced phosphorus inflow.     

Alleviating salt stress on soybean (Glycine max (L.) Merr.) – Bradyrhizobium japonicum symbiosis,using signal molecule genistein

For the onset of symbiosis process between soybean (Glycine max (L.) Merr.) and Bradyrhizobium japonicum, signals should be exchanged. Salinity has inhibitory effects on the symbiosis between the two partners. Hence, a greenhouse experiment was planned to: (1) determine the stressful effects of salinity on soybean and B. japonicum symbiosis, hypothesizing that they can inhibit the signal exchange process between the two partners, and (2) determine if the addition of genistein (a nod gene inducer) to B. japonicum (strain 532C) inocula could overcome the stressful effects of salinity on the Bradyrhizobium – soybean symbiosis. Three levels of salinity (control, 36 and 61 mmolar or 3.6 and 6.1 mmhos/cm) and three levels of genistein (0, 5 and 20 μM) were combined in a factorial fashion in four replicates. Soybean plants were harvested at three different times including 20, 40 and 60 days after inoculation (DAI). Genistein enhanced soybean nodulation and growth, and such effects became greater with time under high salinity levels. For example, at 60 DAI the enhancing effects of genistein on the symbiosis process in soybean was more pronounced at the highest level of salinity. The significant interaction effect between genistein 5 μM and salinity 61 mmolar may reveal the direct role of genistein 5 μM in overcoming the stressful effects of salinity on the symbiosis between B. japonicum and soybean, and hence, plant growth. This novel finding may be very useful to increase soybean yields in salty croplands.     

Evaluation of urea ammonium polyphosphate (UAPP) I. Effectiveness of banded and seed‐placed UAPP on irrigated corn (Zea mays L.)

Abstract

Field trials were established on an irrigated loamy sand using corn as a test crop. Row fertilizer was placed with the seed (seed‐placed) or in the conventional side placement position (side‐placed). The side‐placed treatments consisted of two carriers of UAPP (28–28–0 and 36–18–0), diammonium phosphate (DAP, 18–46–0) plus ammonium nitrate (AN, 33–0–0), and a control treatment. Two rates of application were used for each carrier. Seed‐placed treatments consisted of two carriers of UAPP (28–28–0 and 36–18–0), concentrated superphosphate (CSP, 0–45–0) plus AN, CSP, AN, and a control treatment. Two rates of application were used for each carrier, except AN, which was used at three rates.

High rates of side‐placed UAPP delayed emergence of corn and lowered the final population. Early season N concentration in corn seedlings was not affected by rate or carrier of side‐placed N. Early season P concentration in the corn seedlings was greater for AN + DAP than UAPP treatments at all rates of P, presumably due to toxic accumulation of free NH₃ in the UAPP band. High rates of side‐placed UAPP also reduced the yield of corn.

High rates of seed‐placed AN + CSP and UAPP reduced the germination of corn. However, low rates of UAPP also reduced germination, whereas low rates of AN + CSP did not affect germination. Since UAPP has a lower salt index than AN + CSP, the “salt effect”; of low rates of UAPP does not explain its effect on germination and emergence. The deleterious effects of UAPP were due apparently to either NH₃ or NO₂‐N toxicity.     

Nitrogen deficiency induced a decrease in grain yield related to photosynthetic characteristics,carbon–nitrogen balance and nitrogen use efficiency in proso millet (Panicum miliaceum L.)

ABSTRACT

Field experiments involving proso millet (Panicum miliaceum L.) cultivar under four nitrogen (N) levels (N0, N60, N105 and N150) were conducted in 2015 and 2016 to explore the decrease in grain yield under N deficiency related to the changes in leaf photosynthetic characteristics, carbon (C)–N balance and N use efficiency. Results showed that N deficiency decreased the net photosynthesis rate, stomatal conductance, transpiration rate and chlorophyll content and increased the intercellular CO₂ concentration of proso millet flag leaves from flowering to maturity. N deficiency negatively regulated the C–N balance and increased the C/N ratio by reducing the total N, soluble protein and soluble sugar contents, resulting in high starch content. N uptake and utilisation were significantly reduced because of less available N. Significantly positive correlations were observed between the grain yield and photosynthetic characteristics or N use efficiency, whereas a negative correlation was found between the grain yield and the C/N ratio. The yields generated by N0, N60 and N105 were lower than that of N150 in both years. The N fertiliser regression formulae developed in the study would provide useful information about the N fertiliser rate of proso millet.     

Estimation of Water Content in Winter Wheat (Triticum aestivum L.) and Soil Based on Remote Sensing Data–Vegetation Index

In this study, a suitable and near-real-time water status monitoring approach for winter wheat before harvest was developed with remotely sensed satellite data. Seven vegetation indices were extracted as remote-sensing parameters by making full use of the land surface reflection and land surface temperature transmitted by moderate resolution imaging spectroradiometer (MODIS) data. The correlation of each vegetation index and measured values of winter wheat and soil water contents in different crop growth periods was established. The simulation models, combining vegetation index, soil water content (SWC), and plant water content (PWC) in different winter wheat growth periods, were constructed to predict water content by using remote-sensing data. We found that the correlations between the difference vegetation index (DVI) and the perpendicular vegetation index (PVI) in the beginning of the stem elongation period with SWC were highly significant (P < 0.01); the correlation between the global environmental monitoring index (GEMI) in the ear emergency period and SWC was highly significant (P < 0.01). Furthermore, the correlation between the PVI in maturing period and SWC was highly significant (P < 0.01). Data of different coefficients of vegetation indices and PWC in different winter wheat growth periods illustrated that correlation between the DVI in the beginning of stem elongation period and PWC was highly significant (P < 0.01), while the correlation between the PVI in the maturing period and PWC was highly significant. Our results indicated that spatial and temporal vegetation indices were closely related to soil moisture and winter wheat water content in Wenxi County, Shanxi Province (P. R. China). The vegetation index is conceptually and computationally straightforward and may be used in prediction of environmental hydrological status.     

Agronomic, chemical and genetic variability of saffron (Crocus sativus L.) of different origin by LC-UV–vis-DAD and AFLP analyses

The identification of a bi-univocal correspondence between geographical origin of saffron (Crocus sativus L.) and the composition of its stigmas has recently been the subject of many research papers, which have focused on the analysis of the differences among the so called “minor components”, such as flavonoids and volatiles, in the secondary metabolic pattern of this spice. Saffron pigments (crocetin esters), on the other hand, constitute the majority of the metabolites found in its stigmas, and their spectrophotometric measurement is still used as an official method to determine the quality of the spice in terms of coloring power. To our knowledge, no attempts have been made to find a correspondence between the geographical origin of different saffron samples and their morphological traits and pigments pattern. In this paper, we have demonstrated that saffron corms of different origins, grown in the same experimental field, produce daughter corms with different dimensions and still produce stigma samples with different pigment profiles. Furthermore, daughter corm dimensions and pigment profile even more so, may be related to the origin of the sample, and therefore pigments can be used as chemotaxonomic markers. Compositional analyses results were corroborated by genetic data obtained using AFLP molecular markers.     

Contribution of Roots and Mycorrhizal Hyphae on Phosphorus Efficiency of Maize (Zea mays,L.) Genotypes Grown on Calcareous Soil—A Mechanistic Modeling Approach

ABSTRACT

This work was conducted to study phosphorus (P) efficiency of two maize genotypes (Zea mays, L.) in calcareous soil grown in potted soil with two levels of P in soil by adding 40 and 270 mg P/kg soil. Half of the pots were inoculated with arbuscular mycorrhizal fungi (AMF) (Rhizoglomus irregulare). The maize genotypes were harvested two times at 35 and 50 days after transplanting. The plant dry matter, root length and Plant P uptake of maize genotype Hagen 1 without mycorrhizal fungi (AMF) increased significantly compared with Hagen 9 at a low P level. In contrast, there was no significant difference between two maize genotypes inoculated with AMF under the same P level. The predicted value increased rapidly with increasing P levels from about 70% up to 97% in both maize genotypes with and without mycorrhizal fungi. At a low P level, the mycorrhizae hyphae contributed by about 31.6% and 30.2% of the predicted total P uptake in maize genotype Hagen 1 and Hagen 9, respectively. The results of this study suggested that the P-inefficient genotype Hagen 9 improved with inoculation with mycorrhizal fungi under a low P level at the same conditions of this experiment. Also, root growth system and mycorrhizal hyphae length would be a suitable plant parameter for studying P efficient maize genotypes, especially under limited P supply. The current study clearly pointed out that the mechanistic simulation model (NST 3.0) provides useful tools for studying the role of AMF in P uptake of plant.     

Expression of concern: “Hassan W,David J (2014) Effect of lead pollution on soil microbiological index under spinach (Spinacia oleracea L.) cultivation. J Soils Sediments 14: 44–59”

Journal of Soils and Sediments -     

Intra‐specific variation for salt tolerance in a potential oil‐seed crop,brown mustard (Brassica juncea (l.) Czern. and Coss.)

Thirty eight accessions of brown mustard (Brassica juncea (L.) Czern. and Coss.) were screened after two weeks growth in solution culture containing 120 mol m‐³ NaCl. Considerable variation for salt tolerance was observed in this set of germplasm, since some accessions showed relatively vigorous growth in saline medium.

In order to determine the consistency of degree of salt tolerance at different growth stages of crop life cycle two salt tolerant accessions, P‐15 and KS‐51 and two salt sensitive 85362 and 85605 were tested at the adult stage in 0(control), 100 and 200 mol m^‐3 NaCl. Both the tolerant accessions produced significantly greater fresh and dry biomass and had considerably higher seed yield than those of the salt sensitive accessions. Analysis of different ions in the leaves showed that salt tolerant accessions contained greater amounts of Na⁺, K⁺ and Ca²⁺ than the salt sensitive accessions, although they did not differ significantly for leaf Cl^‐. Only one salt tolerant accession P‐15 had greater leaf K/Na ratio and K⁺ versus Na⁺ selectivity compared with the tolerant KS‐51 and the two salt sensitive accessions.

From this study it was established that there is a considerable variation for salt tolerance in B.juncea which can be exploited by selection and breeding for improvement of its salt tolerance. Since the degree of salt tolerance in B.juncea does not change at different growth stages of the crop life cycle, selection for salt tolerance at the initial growth stages could provide individuals that would be tolerant at all other growth stages. Accumulation of Na⁺, K⁺ and Ca²⁺ in the leaves are important components of salt tolerance in B.juncea.     

Study on Water-Soluble Organic Reducing Substances: II. Organic Reducing Substances Produced from Anaerobic Decomposition of Milk Vetch (Astragalus sinicus L.)

The characteristics of electric charge and molecular weight distribution,oxidation-reduction regimes,e.g.Eh and amounts of organic reducing substances produced by milk vetch during anaerobic decomposition process,were studied by using electrochemical methods.Interaction between soils and organic reducing substances was also observed.The results indicate that the organic reducing substances were mainly the organic compounds with negative and amphoteric charges,which were distributed in two groups at anodic peak potentials of 0.25 and 0.69 volt in differential pulse voltammograms,respectively.Their apparent molecular weights are all less than 700 daltons,in which those active in oxidation-reducion reaction were distributed in the fraction with apparent molecular weight less than 200 daltons.The organic reduction substances can be oxidized by manganese oxides in their interaction with soils.     

Effects of Biosolids-Derived Organomineral Fertilizers,Urea, and Biosolids Granules on Crop and Soil Established with Ryegrass (Lolium perenne L.)

A pot scale trial investigated the agronomic performance of two organomineral fertilizers (OMF₁₅—15:4:4 and OMF₁₀—10:4:4) in comparison with urea and biosolids granules to establish ryegrass (Lolium perenne L.). Two soils of contrasting characteristics and nitrogen (N) application rates in the range of 0–300 kg ha^?1 were used over a period of 3 years. Fertilizer effects were determined on: (1) dry matter yield (DMY) and crop responses, (2) nitrogen use efficiency (NUE), and (3) selected soil chemical properties. Ryegrass responded linearly (R² ≥ 0.75; P < 0.001) to organomineral fertilizers (OMF) application increasing DMY by 2–27% compared with biosolids but to a lesser extent than urea (range: 17–55%). NUE was related to concentration of readily available N in the fertilizer: urea and OMF showed significantly (P < 0.05) greater N recoveries than biosolids. Total N in soil and soil organic matter showed increments (P < 0.05), which depended on the organic-N content in the fertilizer applied. Soil extractable P levels remained close to constant after 3 years of continuous OMF application but increased with biosolids and decreased with urea, respectively (P < 0.05). The application of biosolids changed soil P Index from 5 to 6; hence, there is a need to monitor soil P status. Both OMF₁₀ and OMF₁₅ formulations are suitable for application in ryegrass.