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1.
Paula Martins-Lopes José Lima-Brito Sónia Gomes Julieta Meirinhos Luís Santos Henrique Guedes-Pinto 《Genetic Resources and Crop Evolution》2007,54(1):117-128
Thirty Portuguese and eight foreign olive (Olea europaea L.) cultivars were screened using Random Amplified Polymorphic DNA (RAPD) and Inter-Simple Sequence Repeat (ISSR) markers.
Twenty RAPD primers amplified 301 reproducible bands of which 262 were polymorphic; and 17 ISSR primers amplified 204 bands
of which 180 were polymorphic. The percentage of polymorphic bands detected by ISSR and RAPD was similar (88 and 87%, respectively).
The genetic variability observed was similar in the Portuguese and foreign olive cultivars. Seven ISSR and 12 RAPD primers
were able to distinguish individually all 38 olive cultivars. Twenty specific molecular markers are now available to be converted
into Sequence Characterised Amplified Region (SCAR) markers. Relationships among Portuguese and foreign cultivars is discussed. 相似文献
2.
Ilaria Marotti Alessandra Bonetti Maurizio Minelli Pietro Catizone Giovenni Dinelli 《Genetic Resources and Crop Evolution》2007,54(1):175-188
Randomly amplified polymorphic DNA (RAPD), inter-simple sequence repeat (ISSR) and a semi-random PCR system were used to analyze
the genetic diversity of 16 Italian common bean landraces and their relationship to four commercial cultivars. Of the primers
tested, 8 ISSR, 6 RAPD and 7 semi-random primers produced polymorphic and reproducible DNA fragments. A higher proportion
of polymorphic bands were observed using ISSR (85%) and semi-random (90%) primers than RAPD (69%) method. The combination
of any two semi-random markers allowed the identification of all 20 bean genotypes. In contrast ISSR (except for primer (CAC)3GC) and RAPD markers appeared to be less informative as more than two markers were necessary to achieve the same diagnostic
level. Moreover, 7 ISSR, 2 RAPD and 8 semi-random exclusive bands were identified as putative population-specific markers.
Semi-random and ISSR derived dendrograms showed similar tendencies in terms of genetic relatedness, whereas clustering of
genotypes within groups was not similar when compared with the RAPD technique. Despite the different ability to resolve genetic
variation among the investigated landraces, two major clusters with less than 60% (ISSR) and 40% (RAPD and semi-random) genetic
similarity were formed with all three marker systems. The two groups were correlated with the phaseolin patterns and seed
size of the landraces. The analysis showed that the cultivar ȁ8Lingua di Fuocoȁ9 and most of the landraces (13 out of 16)
collected in Italy belong to the Andean gene pool, whereas only the three populations from Pratomagno belong to the Middle
American gene pool. 相似文献
3.
Yu-Xia Yang Wei Wu You-Liang Zheng Li Chen Ren-Jian Liu Chun-Yan Huang 《Genetic Resources and Crop Evolution》2007,54(5):1043-1051
Genetic diversity and relationships among 48 safflower accessions were evaluated using 22 inter-simple sequence repeats (ISSR)
primers. A total of 429 bands were amplified, and 355 bands (about 82.7%) were polymorphic. Five to forty-one polymorphic
bands could be amplified by each primer, with an average of 16.1 polymorphic bands per primer. The results showed that the
polymorphism of the safflower germplasm was higher at the DNA level. All the 48 accessions could be distinguished by ISSR
markers and were divided into 9 groups based on ISSR GS by using UPGMA method. The genetic relationships among the accessions
from different continents were closer. Comparatively, the genetic diversity of the accessions originated from Asia was higher,
from Europe assembled. The results also showed that the genetic variation of accessions from Indian and Middle Eastern safflower
diversity centers were relatively higher. ISSR is an effective and promising marker system for detecting genetic diversity
among safflower and give some useful information on its phylogenic relationships. 相似文献
4.
Total 65 lotus accessions in genus Nelumbo mainly collected from China, were subjected to random amplified polymorphic DNA (RAPD) markers to estimate the genetic diversity
and to test the genetic basis of the relationships between morphotypes and molecular markers. Seventeen primers generated
a total of 195 highly reproducible and discernible loci, among which 173 were polymorphic. Percent polymorphism varied from
66.7 to 100 with an average of 88.72, and five primers out of them, OPC05, OPG10, OPN20, OPP09 and OPS17, showed 100% polymorphism.
A relatively high genetic diversity was detected among all the samples with the similarity coefficient values ranging from
0.45 to 0.85, and Nei’s gene diversity (h) 0.30, and Shannon index (I) 0.46. The UPGMA dendrogram clustered 65 accessions in four clusters and the clustering pattern showed two groups, N. nucifera ssp. nucifera and those accessions related to the American lotus, and some special cultivars, landraces, hybrids and the American lotus.
Principal Coordinate Analysis (PCA) further indicated that the genetic diversity of Nelumbo accessions was not evenly distributed, instead, was presented by a clustered distribution pattern. Similar to the results
revealed by the dendrogram, two main groups representing the two subspecies of N. nucifera, as well as some special landraces, cultivars of Chinese lotus, the Japanese lotus and hybrids out of the two groups were
obtained. Neither the UPGMA dendrogram nor the PCA analysis exhibited strict relationship with geographic distribution and
morphotypes among the accessions. 相似文献
5.
Ilknur Solmaz Nebahat Sari Yildiz Aka-Kacar N. Yesim Yalcin-Mendi 《Genetic Resources and Crop Evolution》2010,57(5):763-771
Genetic diversity of the Turkish watermelon genetic resources was evaluated using different Citrullus species, wild relatives, foreign landraces, open pollinated (OP) and commercial hybrid cultivars by RAPD markers. The germplasm
was consisted of 303 accessions collected from various geographical regions. Twenty-two of 35 RAPD primers generated a total
of 241 reproducible bands, 146 (60.6%) of which were polymorphic. Based on the RAPD data the genetic similarity coefficients
were calculated and the dendrogram was constructed using UPGMA (Unweighted pair-group method with arithmetic average). Cluster
analysis of the 303 accessions employing RAPD data resulted in a multi-branched dendrogram indicating that most of the Turkish
accessions belonging to var. lanatus of Citrullus lanatus (Thunb.) Matsum et Nakai were grouped together. Accessions of different Citrullus species and Praecitrullus fistulosus (Stocks) Pangalo formed distant clusters from C. lanatus var. lanatus. Among 303 accessions, a subset of 56 accessions was selected representing different groups and a second dendrogram was constructed.
The genetic similarity coefficients (GS) within the Turkish accessions were ranged from 0.76 to 1.00 with 0.94 average indicating
that they are closely related. Taken together, our results indicated that low genetic variability exist among the watermelon
genetic resources collected from Turkey contrary to their remarkable phenotypic diversity. 相似文献
6.
Shanmugam Rajasekar Shui-zhang Fei Nick E. Christians 《Genetic Resources and Crop Evolution》2007,54(1):45-53
Colonial bentgrass (Agrostis capillaris L.) is a cool-season grass, native to temperate Asia and Europe. It has good tolerance to low temperatures and partial shade
and is well suited to golf course fairways and tees. Little information is available regarding levels and patterns of genetic
variation among populations of colonial bentgrass, which would be useful for breeding programs. To study the genetic relationships
among 27 colonial bentgrass accessions obtained from the US National Plant Germplasm System (NPGS), randomly amplified polymorphic
DNA (RAPD) markers were scored and analyzed. Out of 80 primers screened, 16 were selected for further analysis, which yielded
a total of 120 polymorphic bands used to differentiate the accessions. Dice's similarity coefficients for pair-wise comparisons
ranged from 0.23 to 0.84 based on the RAPD data. Since there was no similarity coefficient value close to 1 between any two
accessions, there was no apparent duplication among the sampled accessions. A dendrogram constructed on the basis of the Unweighted
Pair Group Method with Arithmetic average (UPGMA) clustering algorithm clearly separated 26 of the accessions into three clusters
with one accession distinct from the rest. The least similar pair of accessions was PI 204397 from Turkey and PI 628720 from
Bulgaria, and the most similar pair was PI 509437 from Romania and PI 491264 from Finland. Clustering patterns based on principal
components analysis (PCA) corresponded well with the dendrogram. A high cophenetic correlation (r = 0.82) was found between the RAPD data matrix and cophenetic matrix. The accession PI 628720, from Bulgaria, did not cluster
with any other accessions. 相似文献
7.
Genetic diversity of seven Rhus L. species was assessed using random amplified polymorphic DNA (RAPDs) markers. Initially, 90 primers were screened, of which 25 produced reproducible amplification products. These primers generated a total of 296 bands, with an average of 11.8 bands per primer. Out of 296 bands scored, 236 (80%) were polymorphic and 62 (20%) were monomorphic. Primers OPC-05 and OPD-05 generated 100% polymorphic bands. The resolving power of primers ranged from 9.4 to 26.8. Similarity matrix values ranged from 0.45 to 0.63. The dendrogram generated using Unweighted Pair Group Method using Arithmetic Averages (UPGMA) grouped all the species of Rhus in one major group with two sister groups, whilst R. pyroides Burch. and R. dentata Thunb. were outliers. R. gerrardii (Harv. ex Engl.) Diels, R. glauca Thunb. and R. pentheri Zahlbr. constituted one sister group, while R. natalensis Bernh. ex C. Krauss and R. gueinzii Sond. were included in the other. The degree of genetic diversity observed between seven species of Rhus with RAPD markers suggest that this approach could be used for studying the phylogeny of the genus. 相似文献
8.
Target region amplification polymorphism (TRAP) markers were used to assess genetic variability among 38 germplasm accessions
and 10 commercial hybrids of spinach (Spinacia oleracea L.), an economically important leafy vegetable crop in many countries. Germplasm accessions with different geographic origins
and 10 commercial hybrids were examined. For assessing genetic diversity within accessions, DNA was extracted from 12 individual
seedlings from six germplasm accessions and two hybrids. A relatively high level of polymorphism was found within accessions
based on 59 polymorphic TRAP markers generated from one fixed primer derived from the Arabidopsis-like telomere repeat sequence and two arbitrary primers. For evaluating interaccession variability, DNA was extracted from
a bulk of six to 13 seedlings of each accession. Of the 492 fragments amplified by 12 primer combinations, 96 (19.5%) were
polymorphic and discriminated the 48 accessions from each other. The average pair-wise genetic similarity coefficient (Dice)
was 57.5% with a range from 23.2 to 85.3%. A dendrogram indicated that the genetic relationships among the accessions were
not highly associated with the geographic locations in which the germplasms were collected. The seven commercial hybrids were
grouped in three separate clusters, suggesting that the phenotype-based breeding activities tended to reduce the genetic variability.
This preliminary study demonstrated that TRAP markers are effective for fingerprinting and evaluating genetic variability
among spinach germplasms.
Mention of trade names or commercial products in this article is solely for the purpose of providing specific information
and does not imply recommendation or endorsement by the US Department of Agriculture.
The U.S. Government's right to retain a non-exclusive, royalty-free license in and to any copyright is acknowledged. 相似文献
9.
S. C. Debnath 《Genetic Resources and Crop Evolution》2007,54(3):509-517
Forty-three wild cranberry (Vaccinium macrocarpon Ait.) clones collected from four Canadian provinces and five cranberry cultivars were assessed for genetic variability by
using random amplified polymorphic DNA (RAPD)-PCR. Fourteen primers generated 161 polymorphic RAPD-PCR bands. A substantial
degree of genetic diversity was found among the wild cranberry collections. Cluster analysis by the unweighted pair-group
method with arithmetic averages (UPGMA) separated the wild clones and three cultivars into five main clusters, and identified
the two remaining cultivars as outliers. Furthermore, within four clusters, the genotypes tended to form sub-clusters that
were in agreement with the principal coordinate (PCO) analysis. Geographical distribution explained 10% of total variation
as revealed by analysis of molecular variance (AMOVA). The RAPD markers detected a sufficient degree of polymorphism to differentiate
among cranberry clones and cultivars, making this technology valuable for germplasm management and the more efficient choice
of parents in current cranberry breeding programs. 相似文献
10.
Lihua Yao Xiaoyan Zheng Danying Cai Yuan Gao Kun Wang Yufen Cao Yuanwen Teng 《Genetic Resources and Crop Evolution》2010,57(6):841-851
A total of 8117 suitable SSR-contaning ESTs were acquired by screening from a Malus EST database, among which dinudeotide SSRs were the most abundant repeat motif, within which, CT/TC followed by AG/GA were
predominant. Based on the suitable sequences, we developed 147 SSR primer pairs, of which 94 pairs gave amplifications within
the expected size range while 65 pairs were found to be polymorphic after a preliminary test. Eighteen primer pairs selected
randomly were further used to assess genetic relationship among 20 Malus species or cultivars. As a result, these primers displayed high level of polymorphism with a mean of 6.94 alleles per locus
and UPGMA cluster analysis grouped twenty Malus accessions into five groups at the similarity level of 0.6800 that were largely congruent to the traditional taxonomy. Subsequently,
all of the 94 primer pairs were tested on four accessions of Pyrus to evaluate the transferability of the markers, and 40 of 72 functional SSRs produced polymorphic amplicons from which 8
SSR loci selected randomly were employed to analyze genetic diversity and relationship among a collection of Pyrus. The 8 primer pairs produced expected bands with the similar size in apples with an average of 7.375 alleles per locus. The
observed heterozygosity of different loci ranged from 0.29 (MES96) to 0.83 (MES138), with a mean of 0.55 which is lower than 0.63 reported in genome-derived SSR marker analysis in Pyrus. The UPGMA dendrogram was similar to the previous results obtained by using RAPD and AFLP markers. Our results showed that
these EST-SSR markers displayed reliable amplification and considerable polymorphism in both Malus and Pyrus, and will contribute to the knowledge of genetic study of Malus and genetically closed genera. 相似文献
11.
B. Kalyana Babu N. Senthil S. Michael Gomez K. R. Biji N. S. Rajendraprasad S. Satheesh Kumar R. Chandra Babu 《Genetic Resources and Crop Evolution》2007,54(2):399-404
Finger millet (Eleusine coracana), an allotetraploid cereal, is widely cultivated in the arid and semiarid regions of the world. Being rich in protein and
calcium, finger millet serves as an important staple food for rural populations in developing tropical countries where calcium
deficiency and anemia are wide spread. Thirty-two finger millet genotypes were fingerprinted using 50 random amplified polymorphic
DNA (RAPD) markers. Out of the total 529 loci generated using the 50 RAPD primers, 479 loci (91%) were polymorphic and informative
to differentiate the accessions. Cluster analysis grouped the 32 finger millet accessions into two major clusters. Among the
32 finger millet genotypes, GEC 182 and CO 12 were distantly related with a low similarity index of 0.315. These two accessions
also differed considerably in days to flowering and grain weight; GEC 182 is early flowering and has bold grains, while CO
12 is late flowering and has smaller grains. These two accessions with higher diversity at molecular level, phenology and
grain weight will be ideal as parents in hybridization programme, to develop improved finger millet varieties suitable for
peninsular region of India. 相似文献
12.
There are many valuable Tadehagi accessions in southwest China, but it is unknown that the genetic diversity and phylogenetic relationship of these Tadehagi resources. This report is the first study in which 41 primers of inter-simple sequence repeat (ISSR) were used to assess
the genetic diversity of 36 Tadehagi accessions from 3 provinces in the southwest of China. Totally, 30 usable ISSR primers detected 163 polymorphic bands among
the 36 accessions, which suggested high utility of ISSR primers in the genetic analysis of Tadehagi accessions. Genetic similarity coefficients among all of the accessions ranged from 0.54 to 0.92 with the average of 0.79
based on the ISSR data, indicating high level of genetic variation in Tadehagi resources from the southwest of China. As for the 3 population, Hainan population had the maximum average genetic similarity
coefficients of 0.81, while similarity coefficient of Guangxi and Yunnan population was 0.75 and 0.74, respectively. All the
36 Tadehagi accessions were divided into 4 groups in the UPGMA dendrogram constructed from genetic similarity coefficients. The Tadehagi accessions from Yunnan and Guangxi provinces showed more genetic variation and occupied the bottom of the dendrogram. On
the contrary, those from Hainan Province had less genetic variation and clustered in the middle and top of the dendrogram.
The information on the genetic diversity and phylogenetic relationship from this study is propitious to construct a core germplasm
collection and develop novel Tadehagi cultivars with desired economic traits. 相似文献
13.
Vinod Kumar Yadav Sandeep Kumar Ravindra K. Panwar 《Genetic Resources and Crop Evolution》2007,54(6):1285-1289
The present investigation was carried out on fifteen germplasm lines of Pisum sativum L. were used for characterization using Randomly Amplified Polymorphic DNA (RAPD) markers. While 12 random primers were taken,
out of them 11 primers gave amplification. These primers gave a total of 133 bands out of which 106 were polymorphic. Genetic
similarities of the RAPD profiles were estimated by using Jaccard’s coefficient with NTSYSpc 2.0 software. The similarity
index values ranged from 0.263 to 0.793 indicating the presence of enormous genetic diversity at molecular level. A dendrogram
generated by cluster analysis divided fifteen fieldpea genotypes into two Groups A and B. Major Group A have five genotypes
and major Group B have nine genotypes. 相似文献
14.
Y. -B. Pan D. M. Burner B. L. Legendre M. P. Grisham W. H. White 《Genetic Resources and Crop Evolution》2005,51(8):895-903
A local collection of 33Saccharum spontaneum L. clones and two sugarcane cultivars (LCP 82-89 and LCP 85-384) were assessed for genetic variability using random amplified polymorphic DNA (RAPD)-PCR. A total of 157 polymorphic RAPD-PCR bands were scored with 17 primers. The number of RAPD-PCR products per primer ranged from four to 16. The data were analyzed with two multivariate analysis software programs, NTSYSpc and DNAMAN®. Although these two programs yielded similar results, a bootstrapped phylogenetic tree could only be generated with the DNAMAN® software. A substantial degree of genetic diversity was found within the localS. spontaneum collection. Pairwise genetic homology coefficients ranged from 65% (SES, 196/Tainan 2n = 96) to 88.5% (IND 81-80/IND 81-144). LCP 82-89 and LCP 85-384 shared a greater similarity (82%) than either was to any clone ofS. spontaneum (ranging from 60.5 to 75.2%). The 33S. spontaneum clones were assigned to eight groups independent of their geographic origin or morphology, while the two sugarcane cultivars were assigned to the ninth group. All but two pairs ofS. spontaneum clones could be distinguished by a single RAPD primer OPBB-02. The use of a second primer, either OPBE-04 or Primer 262, separated allS. spontaneum clones. One amplification product from the RAPD primer OPA-11, OPA-11-336, proved to be cultivar-specific and has been adopted for use in our breeding program. Information from this study would help conserve the genetic diversity ofS. spontaneum.
Disclaimer: Product names and trademarks are mentioned to report on available data; however, the USDA neither guarantees nor warrants the standard of the product, and the use of the name by USDA does not imply the approval of the product to the exclusion of others that may also be suitable. The experiments reported comply with the current laws of the USA. 相似文献
15.
The genus Arachis is divided into nine taxonomic sections. Section Arachis is composed of annual and perennial species, while section Heteranthae has only annual species. The objective of this study was to investigate the genetic relationships among 15 Brazilian annual
accessions from Arachis and Heteranthae using RAPD markers. Twenty-seven primers were tested, of which nine produced unique fingerprintings for all the accessions
studied. A total of 88 polymorphic fragments were scored and the number of fragments per primer varied from 6 to 17 with a
mean of 9.8. Two specific markers were identified for species with 2n = 18 chromosomes. The phenogram derived from the RAPD data corroborated the morphological classification. The bootstrap analysis
divided the genotypes into two significant clusters. The first cluster contained all the section Arachis species, and the accessions within it were grouped based upon the presence or absence of the ‘A’ pair and the number of chromosomes.
The second cluster grouped all accessions belonging to section Heteranthae. 相似文献
16.
Gert Poulsen Claus Holten Roland von Bothmer 《Genetic Resources and Crop Evolution》2007,54(5):1105-1115
Dead seeds of a fodder beet cultivar ‘Elvetham’ stored under ambient conditions since 1880 were compared to a homonymous sample
preserved in an on-farm situation in Denmark. DNA was isolated from single seeds and successfully applied to Amplified Fragment
Length Polymorphism (AFLP) analysis of the accessions. Six primer pairs were used to determine the similarity between the
two accessions based on 112 polymorphic bands. Furthermore, similarity among seven cultivars of fodder beets representing
the main types used in Scandinavia at the end of the 19th century was determined. This analysis was based on 152 polymorphic
bands. Differentiation among the seven cultivars was determined to a mean G
ST value of 0.438, while G
ST between the two ‘Elvetham’ accessions was 0.266. A principal coordinate analysis based on jaccards similarity index illustrates
that the two ‘Elvetham’ accessions are different from each other. The differentiation is higher than the value found between
two separate ‘Eckerndorfer’ accessions. The results indicate that the cultivated accession has changed. Additionally, the
value of applying old dead seed material for documentation in gene banks is demonstrated.
During the analysis it was found that DNA isolated from seeds and leaves behaved differently in the AFLP process, however,
the two fractions assigned to their common accession. 相似文献
17.
Reliable characterization of the variation among wild and cultivated yams in Nigeria is essential for improved management
and efficient utilization of yam genetic resources. RAPD and double stringency PCR (DS-PCR) analyses were used to investigate
genetic relationships and the extent of redundancy among 30 accessions of two cultivated, and 35 accessions of four wild yam
species collected from Nigeria. Twenty-five selected random decamer and two microsatellite primers were used individually
and in combination to generate DNA profiles for each accession of the six Dioscorea species. The number of amplified fragments varied from 7 to 18 fragments per primer/primer combination. Different levels
of intraspecific genetic diversity were found, with Dioscorea rotundata Poir. being the most variable. Based on identical profiles for the RAPD and DS-PCR primers, 12 duplication groups consisting
of a total number of 37 accessions were observed in the present study. An UPGMA analysis grouped the majority of plants according
to the species. Cultivated yams belonging to the D. cayenensis–rotundata species complex, which were classified into seven morphotypes/varietal groups, could be clearly separated into two major
groups corresponding to D. rotundata Poir. and D. cayenensis Lam. D. cayenensis cultivars exhibited a low level of intraspecific variation and were genetically close to the wild species Dioscorea burkilliana J. Miège. D. rotundata cultivars classified into six varietal groups showed a high degree of DNA polymorphism and were separated into two major
groups that appeared most closely related to Dioscorea praehensilis Benth. and Dioscorea liebrechtsiana de Wild. We propose, based on these results, that cultivars classified into D. cayenensis should be considered as a taxon separate from D. rotundata. The implications of intraspecific variability for the ex situ conservation of wild and cultivated yam germplasm in Nigeria are discussed. 相似文献
18.
Amplified fragments length polymorphism (AFLP) was used to distinguish 20 cultivars of sesame (Sesamum indicum L.) and to elucidate the genetic relationship among these genotypes. The data were also used to estimate the usefulness of
parameters currently used to assess the informativeness of molecular markers. A total of 339 markers were obtained using 8
primer combinations. Of the bands, 91% were polymorphic. Five primer combinations were able to distinguish all 20 cultivars
used. None of the remaining three primer combinations could distinguish all accessions if used alone, but using all three
combinations reduced the probability of a random match to 5 × 10−5. Polymorphic information content (PIC), resolving power (Rp) and marker index (MI) of each primer combination failed to correlate significantly with the number of genotypes resolved.
Jaccard’s similarity coefficients ranged from 0.31 to 0.78. Fifteen cultivars were grouped by four UPGMA-clusters supported
by bootstrapping values larger than 0.70. The grouping pattern was similar to the grouping generated by principal coordinate
analysis. The results demonstrated that AFLP-based fingerprints can be used to identify unequivocally sesame genotypes, which
is needed for cultivar identification and for the assessment of the genetic variability of breeding stocks. We recommend to
use the number of cultivars identified by a primer combination instead of PIC, Rp and MI; and to calculate the maximal, instead of average probability of identical match by chance in the assessment of the
informativeness of a marker for cultivar identification. 相似文献
19.
Marie Malice Nicolas Martin Audrey Pissard Jorge A. Rojas-Beltran Antionio Gandarillas Pierre Bertin Jean-Pierre Baudoin 《Genetic Resources and Crop Evolution》2007,54(4):685-690
ISSR molecular markers have been used to investigate genetic diversity of oca (Oxalis tuberosa Mol.), an Andean neglected tuber crop species. Sampling procedure allowed a preliminary study of the genetic diversity at
the intra- and intervarietal levels. Twenty tuber lots conserved in situ in the microcentre of Candelaria and ex situ in the Toralapa Centre (Bolivia) were identified. Four ISSR primers amplified a total of 25 fragments of which 17 (68%) were
polymorphic. These experiments show that the structure of oca varieties is mainly based upon vernacular names with a greater
differentiation among tuber lots than within them, supporting agromorphological data. ISSR technique enlightened the existence
of heterogeneous varieties in oca and divergence between in situ and ex situ conservation strategies. These observations are potentially linked to the different ways of management of tubers in these
two conservation systems. 相似文献
20.
To evaluate the genetic diversity and to clarify the genetic relationships of Japanese peach cultivars, we analyzed the amplified
fragment length polymorphism (AFLP) and traced the pedigree of 17 Japanese commercial peach cultivars and six traditional
accessions. Sixteen AFLP primer combinations produced a total of 837 fragments and 146 polymorphic bands with a polymorphism
percentage of 17.5%. All of the peach accessions could be identified from differences in at least 10 polymorphic bands. A
cluster analysis showed that all the Japanese commercial peach cultivars, except ‘Kiyomi’ and ‘Jichigetsuto’, formed a major
group consisting of three sub-groups. Of the six traditional accessions, four were genetically distant from the Japanese commercial
peach cultivars while two accessions from China were classified into the Japanese commercial peach cultivars group. Both the
AFLP analysis and pedigree tracing suggested that Japanese commercial peach cultivars are mainly derived from ‘Shanhai Suimitsuto’,
one of the traditional accessions from China. Although the genetic relationships revealed by AFLP were generally in agreement
with those shown by the pedigree information, some contradictions were found. Combining the AFLP results and pedigree information
can provide a better understanding of the genetic relationships of Japanese peach cultivars. 相似文献