Epizootiology of Parvicapsulaminibicornis in Fraser River sockeye salmon, Oncorhynchusnerka (Walbaum)

Late-spawning Fraser River sockeye salmon, Oncorhynchus nerka , stocks have suffered significant prespawn mortality associated with an unusually early freshwater migration pattern and the myxosporean parasite Parvicapsula minibicornis . Surveys of migrating adult salmon from several spawning populations were conducted in 1999 and 2000 to determine the extent of infection with P. minibicornis , when and where the parasite first becomes detectable during migration, and whether early migrating stocks might be used as sentinels to assess risk of infection in late-spawning stocks. Posterior kidney, preserved in 95% ethanol, was examined for P. minibicornis in stained histological sections and using a polymerase chain reaction (PCR) test. The prevalence of this parasite in all Fraser River sockeye salmon stocks examined was high (range 47–100% infected). In contrast, P. minibicornis was not detected in the fish tested from the two sockeye salmon stocks outside the Fraser River drainage in either 1999 or 2000. The parasite was also not detected histologically or by PCR in the kidney tissue of the fish from the Fraser River that were sampled in salt water or early during their freshwater migration up the river. These findings and the progression in the prevalence and intensity of infection as the fish from three stocks (early Stuart, Weaver Creek and Cultus Lake) were monitored over time, suggest salmon acquired the parasite either in the lower Strait of Georgia or in the lower Fraser River before the confluence of the Harrison River. In both 1999 and 2000 the parasite was present in all Fraser River sockeye salmon stocks sampled, which suggests that early Stuart salmon may be valuable as a sentinel stock for the presence of the parasite in later-spawning stocks.     

Assessing the northern diversion of sockeye salmon returning to the Fraser River, BC

We examine the oft-quoted relationship between the migration of Fraser River sockeye salmon around the northern end of Vancouver Island and sea surface temperatures. We examine the methods used to estimate the northern diversion and conclude that the estimates have a sufficiently low expected error to form a useful representation of sockeye salmon behaviour. The well-known relationship with Kains Island sea surface temperature is explored and problems are pointed out. In particular, we explore why Kains Island temperatures are good predictors of salmon behaviour in May when the sockeye can be over 1000 km away, but the coastal temperatures are poor predictors in July to September when the salmon are actually close by. We show that a more robust predictor can be developed using open ocean temperature fields and we show why Kains Island fails as a predictor during the summer months. Finally, we show by cross-validation that the northern diversion is predictable with an r.m.s. error of about 0.1.     

Interannual differences in prey taken by capelin, herring, and red salmon relative to zooplankton abundance during the spring bloom in a southeast Alaskan embayment

Capelin, herring, and red salmon diets were examined in relation to zooplankton abundance and biomass in the water column and surface layer of Auke Bay, Alaska, during the spring bloom period, 1987 and 1988 (April through mid-June). Euphausiid eggs were the dominant prey of capelin in mid-May 1987. Pseu-docalanus spp. and barnacle nauplii dominated during the rest of the season. Capelin consumed Calanus spp. and Metridia spp. in April and Pseudocaknus and Cen-tropages abdominalis in May and June 1988. During May and June 1987, herring were eating primarily barnacle larvae and Oikopleura spp. During April 1988, herring consumed primarily Calanus spp. and barnacle nauplii. In late April and early May they shifted to Pseudocalanus and Thysanoessa raschii, and in late May and June they consumed Centropages abdominalis and barnacle cyprids. Outmigrating red salmon fry consumed primarily Oikopleura during both years, along with substantial quantities of barnacle larvae. These dietary changes roughly correspond with variations in the abundance of prey taxa in the plankton samples. Likelihood measures of niche breadth indicated that capelin sometimes consume prey in approximately equal proportions to its abundance. Niche overlap between the herring and capelin was greatest in April and early May. Niche overlap was also high between herring and red salmon during June, when herring were in shallow water to breed.     

The vertical distribution of juvenile salmon (Oncorhynchus spp.) and associated fishes in the Columbia River plume

Simultaneous trawling at surface and at depth at one location off the Columbia River, Oregon, in June 2000 identified the depth distribution of juvenile salmonids and associated fishes. Juvenile salmon off the Columbia River were distributed primarily near the surface, within the upper 12 m. Highest densities of subyearling chinook salmon (Oncorhynchus tshawytscha) off the Columbia River were associated with high surface currents and decreasing tidal levels, with time of day possibly a co‐factor. Densities of yearling chinook salmon increased with higher turbidity. Pacific herring (Clupea pallasi) was the most abundant and commonly caught forage fish, with density increasing at night, probably related to diel vertical migration. Catches of juvenile salmonids were not associated with catches of forage fishes. Daytime surface trawling appears to be an appropriate method for assessing the distribution and abundance of juvenile salmonids in marine habitats.     

Detection efficiency and habitat use to inform inventory and monitoring efforts: juvenile coho salmon in the Knik River basin,Alaska

Imperfect detection associated with sampling gear presents challenges for wildlife inventory and monitoring efforts. We examined occupancy dynamics and habitat use of juvenile coho salmon, Oncorhynchus kisutch, in shallow lake environments over a summer and early fall season in the Knik River area of south central Alaska using models which control for and estimate sampling gear detection efficiency. In addition, we present statements for the probability that observed absences at a survey site or from a survey area (a collection of sites) are true absences given some amount of sampling effort and analysts' beliefs about site occupancy and sampling gear detection efficiency which can be used to guide inventory and monitoring efforts for juvenile salmon or other wildlife and plant species. Occupancy modelling results demonstrate that minnow traps were effective at sampling juvenile coho in shallow lake environments, with a mean probability of detection across the study period of 0.68 (i.e., probability of detecting the presence of juvenile coho given that they are present at a trap site; SE = 0.03). Juvenile coho salmon migrated into shallow water lakes in late summer and early fall, presumably to seek out overwinter habitat. N‐mixture modelling examination of habitat use demonstrated that once in shallow lake environments, juvenile coho were widely distributed across a range of microhabitats, with some evidence for preference for shallower depths and warmer water temperatures.     

A synthesis of the life history and ecology of juvenile Pacific herring in Prince William Sound,Alaska

Physical and biological variables affecting juvenile Pacific herring (Clupea pallasi) in Prince William Sound (PWS) from 1995 to 1998 were investigated as part of a multifaceted study of recruitment, the Sound Ecosystem Assessment (SEA) program. Though more herring larvae were retained in eastern PWS bays, ages‐0 and ‐1 herring used bays throughout PWS as nursery areas. Water transported into PWS from the Gulf of Alaska (GOA) contributed oceanic prey species to neritic habitats. Consequently, variations in local food availability resulted in different diets and growth rates of herring among bays. Summer food availability and possible interspecific competition for food in nursery areas affected the autumn nutritional status and juvenile whole body energy content (WBEC), which differed among bays. The WBEC of age‐0 herring in autumn was related to over‐winter survival. The limited amount of food consumption in winter was not sufficient to meet metabolic needs. The smallest age‐0 fish were most at risk of starvation in winter. Autumn WBEC of herring and winter water temperature were used to model over‐winter mortality of age‐0 herring. Differences in feeding and energetics among nursery areas indicated that habitat quality and age‐0 survival were varied among areas and years. These conditions were measured by temperature, zooplankton abundance, size of juvenile herring, diet energy, energy source (GOA vs. neritic zooplankton), WBEC, and within‐bay competition.     

Some behavioural and ecological factors affecting distribution,biomass and production of juvenile Atlantic salmon

Observations were made in an experimental stream tank (total area 14.7 m²) on juvenile Atlantic salmon, Salmo salar L (parr), relating experimental observations to field observations, including the reported diurnal fasting behaviour of juvenile salmon at water temperatures <10 °C. Densities in the tank ranged from five to twenty parr, at water temperatures ranging from 4.6 °C to 15.8 °C. The wide channel of the stream tank, with mean water velocity of 18.8 cm·s^?1, was the preferred section, where territorial behaviour was observed. Biomass was regulated in the wide channel by territorial mosaics or by dominance hierarchies. Dominance hierarchies were reflected in coloration of the fish. Dominant salmon were generally in the wide channel. Densities of salmon parr (of mean fork length 10.2 cm) in the channel ranged from 0.84 m^?2 to 1.73 m^?2, with an average biomass of 14.2 g·m^?2. Growth was least at the 5.9 °C temperature treatment. In experiments at temperatures below 10 °C, feeding, dominance hierarchy and territorial behaviour were observed in daylight hours, contrary to the published literature. Interactions with other species may affect behaviour. Some observations were made on a closely related species, brown trout (Salmo trutta L.), a commonly cohabiting species in many systems. Trout displaced salmon from their preferred locations in the tank and were more aggressive than the salmon, reducing agonistic behaviour by the salmon. The commonest agonistic act shown by salmon was ‘charge’ and that by the trout was ‘approach’. Some field observations affecting behaviour and production are discussed.     

Prey selectivity and diel feeding chronology of juvenile chinook (Oncorhynchus tshawytscha) and coho (O. kisutch) salmon in the Columbia River plume

We studied salmon feeding selectivity and diel feeding chronology in the Columbia River plume. Juvenile chinook and coho salmon were caught by trawling at 2–3 h intervals throughout a diel period on three consecutive days (21–23 June 2000) at stations located 14.8 and 37 km offshore from the mouth of the Columbia River. A total of 170 chinook salmon were caught at the inshore and 79 chinook and 98 coho salmon were caught at the offshore station. After each trawl, potential prey were sampled at different depths with 2–3 different types of nets (1‐m diameter ring net, bongo net, neuston net). Despite the variability in zooplankton abundance, feeding selectivity was surprisingly constant. Both salmon species fed selectively on larger and pigmented prey such as hyperiid amphipods, larval and juvenile fish, various crab megalopae, and euphausiids. Hyperiid amphipods were abundant in the salmon diets and we hypothesize that aggregations of gelatinous zooplankton may facilitate the capture of commensal hyperiid amphipods. Small copepods and calyptopis and furcilia stages of euphausiids dominated the prey field by numbers, but were virtually absent from salmon diet. Juvenile chinook salmon, with increasing body size, consumed a larger proportion of fish. Stomach fullness peaked during morning hours and reached a minimum at night, suggesting a predominantly diurnal feeding pattern. In general, both chinook and coho salmon appear to be selective, diurnal predators, preying mostly on large and heavily pigmented prey items, in a manner consistent with visually oriented, size‐selective predation.     

A matter of timing: the role of ocean conditions in the initiation of spawning migration by late‐run Fraser River sockeye salmon (Oncorhynchus nerka)

Year 1995 marked the start of a major shift to earlier river entry of late‐run Fraser River sockeye salmon (Oncorhynchus nerka) en route to the spawning grounds. Earlier entry has typically been accompanied by considerably greater in‐river mortality. We examine this behavioral change using correlation analyses between the entry timing of the Adams River and Weaver Creek stocks and the surface marine conditions encountered by the stocks during their homing migration from the northeast Pacific several months earlier. For Adams stocks, maximum correlation is between entry timing and offshore winds, such that the weaker the wind stress in the direction of the prevailing surface currents in early July, the earlier the river entry in late summer. For Weaver stocks, maximum correlation is with salinity, such that the lower the surface salinity along the coast in August, the earlier the river entry. We hypothesize that oceanic changes lead to changes in late‐run sockeye physiology which then leads to changes in behavior. Physiological changes are postulated to arise from two types of preconditioning: Type‐1 occurs in the offshore region, whereby the weaker the prevailing currents that normally hinder eastward migration, the more endogenous energy available for maturation and the earlier the river entry. Type‐2 occurs in coastal regions, whereby the lower the salinity, the more rapid the osmoregulatory adaptation to freshwater (and possible susceptibility to water‐borne pathogens) and the earlier the entry. Results suggest that the earlier entry that began in the mid‐1990s is linked to weaker ocean currents and lower coastal salinities.     

Oxidative stability of salmon and herring roe lipids and their dietary effect on plasma cholesterol levels of rats

ABSTRACT:   The oxidative stability of lipids from salmon roe and herring roe was compared with those of commercial fish oils originated from sardine and tuna. Both fish roe lipids contained high amounts of eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA). Total EPA and DHA was more than 35% of total fatty acids in both roe lipids. On the basis of oxygen consumption, fish roe lipids showed the higher oxidative stability than both fish oils. This tendency in oxidative stabilities was also confirmed by the determination of propanal formation during oxidation. Analyses of lipid compositions suggested that the higher oxidative stabilities of fish roe lipids would be mainly due to the presence of phospholipids in them. Dietary effects of salmon and herring roe lipids were also determined. Little increase in total cholesterol level was observed in plasma lipids in rats fed salmon and herring roe lipids, although cholesterol content in fish roe lipids were 6.3% and 9.7% of total lipids for salmon roe and herring roe.     

Distribution and feeding of juvenile Pacific salmon in freshwater tidal creeks of the lower Fraser River, British Columbia

Abstract This study examined juvenile salmonid use of a freshwater tidal creek system draining a wetland on the floodplain of the lower Fraser River, British Columbia, Canada. Chum, Oncorhynchus keta (Walbaum), chinook, O. tshawytscha (Walbaum), and sockeye, O. nerka (Walbaum), salmon fry were abundant in the tidal creeks in spring. The fry were found in non-natal habitat up to 1.5 km from the main channel of the river. The salmon fry ate dipteran adults, larvae and pupae, cyclopoid and harpacticoid copepods, and Collembola. Mysids Neomysis mercedis Holmes (Walbaum), and amphipods, Crangonyx richmondensis occidentalis (Hubricht and Harrison), were also consumed. The upper reaches of an undisturbed creek were the winter rearing habitat for presmolt coho salmon, O. kisutch (Walbaum), where this species ate dipteran pupae and larvae as well as a freshwater isopod, Asellus communis Say (Walbaum).     

Seasonal growth and diet of juvenile chinook salmon (Oncorhynchus tshawytscha) in demonstration channels and the main channel of the Waitaki River, New Zealand, 1982–1983

Abstract– Juvenile chinook salmon in the Waitaki River, New Zealand and demonstration channels, living at about 16°C, increased in length by 0.32 mm day⁻¹ between 4 November and 4 March. They gained weight quickly, accumulated large visceral fat deposits and had high conditions factors. At 1600 h, stomachs averaged half full. The number of prey tended to decline as the fish grew and consumed larger items. Initially the diet was based mainly on chironomid larvae, but by December it included a diversity of prey in more equal proportions. These included Deleatidium in the Waitaki; amphipods in the demonstration channels; various trichopterans, hemipterans, elmid beetles, zooplankton. terrestrial dipterans and a variety of other prey. There were significant differences between sites in numbers of prey consumed and these probably reflected differences in the benthos. Diets in the Waitaki differ from those in the Rakaia River and the food of juvenile salmon appears closely linked to the availability of a diverse range of possible prey.     

Spatial variations in feeding and condition of juvenile pink and chum salmon off Vancouver Island, British Columbia

Spatial variations in feeding and condition of juvenile pink (Oncorhynchus gorbuscha) and chum (Oncorhynchus keta) salmon, and their implications for growth, were examined on the Vancouver Island continental shelf in early summer 1992. Juvenile pink salmon off northern Vancouver Island had more material in their stomachs, were in better condition, and had higher potential growth rates (from a bioenergetics model) than pink salmon off southern Vancouver Island. These variations were consistent with spatial differences in zoo-plankton biomass, there being more plankton in the northern region. There was a significant positive relationship between condition of pinks and the amount of material in their stomachs, suggesting a positive feedback on feeding success. Juvenile chum in the north also had more material in their stomachs than chum to the south. However, condition factor was not significantly different between southern and northern regions nor was there a significant relationship between condition factor and the weight of stomach contents for chum on the southern shelf. A bioenergetics model suggests that chum in the south were food limited. Stable carbon isotope data also indicated different feeding histories for some chum in the southern region, which may have been recent migrants onto the continental shelf from near-shore areas, or possibly a nearby hatchery. Estimation of the energy required by juvenile salmon to migrate north in a continental shelf area with low zooplankton biomass and a weak northerly current (inner shelf), compared with an area with higher zooplankton biomass but a strong southerly current (outer shelf), indicated sufficient surplus energy only in the inner shelf, consistent with observations of northward migrations predominantly through this area. Spatial variations in current velocity and zooplankton biomass can affect feeding, condition, and potential growth of juvenile pink and chum salmon off Vancouver Island.     

长江口中华鲟幼鱼主要饵料生物体内重金属Cu、Cd和Hg的积累与评价

为评价重金属污染对长江口中华鲟幼鱼生长的影响,在长江口水域采集了日本沼虾(Macrobraohium nipponense)、中国毛虾(Acetes chinensis)、狼牙鳗虾虎鱼(Taenioides rubicundus)、矛尾虾虎鱼(Chaeturichthys stigmatias)、窄体舌鳎(Cynoglossus gracilis)等5种中华鲟幼鱼重要饵料生物,研究了Cu、Cd、Hg3种重金属元素在这些饵料生物体内的积累特征,评价了饵料生物受重金属污染的程度。结果显示,虾类Cu的单项污染指数(Pi)均大于0.5,鱼类Cu的Pi均小于0.5;5种饵料生物Cd和Hg的Pi均大于1。表明它们均不同程度受到重金属污染,虾类的重金属污染程度比鱼类严重。与历史资料比较发现,长江口鱼虾的重金属污染存在加重趋势,重金属污染已对洄游入海的中华鲟幼鱼构成威胁。     

The effects of fluvial processes and habitat heterogeneity on distribution, growth and densities of juvenile Atlantic salmon (Salmo salar L.), with consequences on abundance of the adult fish

Abstract – The required freshwater habitats of juvenile Atlantic salmon ( Salmo salar ) are, in general, well known, but vary in quality, related to interacting effects of several variables, which may depend on different parts of a river system. Examples are given of ranges of densities and growth that can be found at various sites in eastern Canada, illustrating the biological and physico-chemical factors affecting production of juvenile salmon. Relative growth rates can indicate habitat quality and population densities. Salmon parr have negative effects on brook trout in riffle habitats. The effects of migrations within the river and of changes with stream succession on juvenile salmon production are illustrated with examples from a Newfoundland river. Migration of age-classes can be quantified from 'self-thinning' curves. Lakes have enhancing effects on downstream fluvial habitats, and, at least in Newfoundland, and probably in many boreal areas, the lacustrine proportion of the basin can be used as an index for deriving estimates of required spawning escapement. The factors described should be taken into account for more refined estimates of river production and management of the salmon resource.     

Infection of gill and kidney of Fraser River sockeye salmon,Oncorhynchus nerka (Walbaum), by Parvicapsula minibicornis and its effect on host physiology

Adult sockeye salmon, Oncorhynchus nerka (Walbaum), migrating upstream in the Fraser River, British Columbia, are exposed to the myxozoan parasite Parvicapsula minibicornis when they enter the river from the ocean. Infections are initially localized in the kidney but have recently been associated with branchitis in one population. Adult fish from five locations in the watershed were sampled to determine whether branchitis was widespread. P. minibicornis infections in kidney glomeruli were prevalent in all samples except for a sample of fish that had just entered the Fraser River from the ocean. For fish captured in spawning streams, parasites were observed in the renal tubules and gill, and branchitis was observed in 70% of fish. Plasma osmolality was negatively correlated with the number of parasites in the kidney tubules, which we hypothesize to be caused by the breach of glomerular membranes as the parasite leaves the fish. Plasma lactate values increased with increasing levels of pathology in gills. These findings support the hypothesis that P. minibicornis impacts the physiology of migrating fish, which may in turn affect the likelihood that adults will be able to migrate and spawn successfully.     

Relationships between juvenile salmon, Salmo salar L., and invertebrate densities in the River Tana, Norway

Abstract –  Juvenile salmon density was related to invertebrate density in 13 streams within the River Tana, northern Norway. There were only small, nonsignificant, differences in benthic density between streams with and without juvenile salmon. All streams with a high density of juvenile salmon had low benthic densities at the stream mouth. Juvenile salmon were not found, or were in very low densities, in streams where the benthic density at the stream mouth was as high or higher than that in the stream. A multiple regression model showed that parr density was related negatively to benthic density at the stream mouth, water velocity and pH, and positively to benthic density within the stream and the proportion of the substratum covered by moss. The amount of overhanging cover in the different streams explained 93% of the variation in the drift density of terrestrial invertebrates in August. The highest densities of juvenile salmon were found in streams with riparian vegetation, and were thus associated with an abundant supply of drift food, especially terrestrial invertebrates.     

RNA–DNA ratio of herring and sand lance larvae from Port Moller, Alaska: Comparison with prey concentration and temperature

A key assumption of hypotheses that link the production of prey for larval fish with year-class strength of fish is that larval growth and condition is food-limited. We tested this assumption by comparing whole-body RNA-DNA ratios of individual Pacific herring, Clupea pallasi , larvae and Pacific sand lance, Ammodytes hex-apterus , larvae from Port Moller, a subarctic Alaskan estuary, with prey concentration and temperature. RNA-DNA ratios were correlated with larval length, but not with prey concentration or temperature. Ratios were not significantly different between a warm, well-mixed station with low prey concentrations and a colder, stratified station with higher prey concentrations. Using RNA-DNA ratios, we classified as starving 11 to 23% of first-feeding (< 13 mm long) herring larvae and 45% of first-feeding (< 7 mm long) sand lance larvae. However, starvation could not have been caused by low concentrations of prey because micro-zooplankton prey concentrations were high enough (16 to 84 prey L^_l) to support relatively high rates of growth. Therefore, starving larvae were either abnormal or they were stIII learning to forage. We conclude that the magnitude of starvation among first-feeding herring and sand lance larvae, and, therefore, the total contribution of starvation to year-class strength, is dependent not only on prey concentration, but on the proportion of a population of larvae that can feed effectively.     

The prevalence of escaped farmed salmon, Salmo salar L., in the River Ewe, western Scotland, with notes on their ages, weights and spawning distribution

Abstract  The prevalence of escaped farmed Atlantic salmon, Salmo salar L., in the River Ewe, western Scotland, was assessed. After the establishment of smolt cages in the catchment and marine cages near the river mouth during 1986–1987, approximately 425 000 parr and smolts, and 122 000 growers have escaped. Between 1987 and 2001, farmed salmon occurred in the rod fishery in 13 of the 15 years, contributing at least 5.8% of the total catch, with a maximum annual frequency of 27.1%. It was estimated that <1% of fish escaping from the marine cages entered the river, but contributed at least 27% of potential anadromous spawners in 1997. Radiotagged, farmed fish in 2001 probably spawned in three subcatchments also used by tagged wild fish. Despite the likelihood of hybridisation there was no change in the median weight or marine age of wild fish, but smolt age decreased significantly ( P  < 0.02). The Ewe has a depleted wild salmon population (≤900 anadromous adults), and further genetic introgression by escapees should be prevented.