重庆肉牛腹泻相关病毒的检测及遗传进化分析

为了解重庆市肉牛病毒性腹泻的病原流行情况,本研究对重庆市8个肉牛养殖场的81份腹泻粪便样本中牛病毒性腹泻-黏膜病病毒（bovine viral diarrhea virus,BVDV）、牛冠状病毒（bovine coronavirus,BCV）、牛轮状病毒（bovine rotavirus,BRV）和牛星状病毒（bovine astrovirus,BAstV）4种致腹泻病毒进行了RT-PCR检测,对PCR产物进行测序,用Mega 6.0软件进行系统发育分析。结果显示,BRV、BAstV和BVDV检出率分别为66.7%、8.6%和7.4%,BCV未检出。遗传进化分析结果表明,测序的5个BRV单独聚为一小支,与GenBank中其他VP6序列有明显的遗传距离;BVDV与中国株和丹麦株聚为一支,遗传关系最近;5个BAstV单独聚为一支,与中国香港株遗传关系最近,但仍有明显的遗传距离。本试验结果表明,重庆地区肉牛腹泻主要发生在6月龄以下犊牛,BRV是该地区肉牛腹泻的重要原因,BRV、BAstV和BVDV 3种病毒的遗传多样性值得进一步关注。     

青海省部分地区3种牛病毒性腹泻病原的感染情况调查

为了解青海省部分牛群中牛病毒性腹泻病毒（bovine viral diarrhea virus,BVDV）、牛轮状病毒（bovine rotavirus,BRV）和牛冠状病毒（bovine coronavirus,BCV）3种牛病毒性腹泻病原的感染现状,本研究采用RT-PCR方法首次对2012～2013年青海省部分地区的32份具有腹泻症状的临床病料及152份健康牛粪便样品进行了BVDV、BRV、BCV的核酸检测与分析。结果显示,32份腹泻牛病料样品中BVDV、BRV、BCV的阳性率分别为65.63%（21/32）、18.75%（6/32）、34.38%（11/32）,且存在2种或3种病原的混合感染;152份健康牛粪便样品中BVDV、BRV、BCV的阳性率分别为3.95%（6/152）、1.97%（3/152）、0（0/152）。该结果表明青海省部分牛群中普遍存在BVDV、BRV、BCV的感染,且混合感染现象严重,需进一步加强青海省地区牛病毒性腹泻病原的综合防控。     

牛星状病毒、牛病毒性腹泻病毒1型、牛冠状病毒和牛轮状病毒四重实时荧光定量RT-PCR检测方法的建立

利用多重荧光定量RT-PCR （real-time RT-PCR）方法,提高对多病原检测的速度和灵敏度,促进对犊牛腹泻的快速诊断和及时治疗。分别在牛星状病毒（BAstV）ORF2基因,牛病毒性腹泻病毒1型（BVDV-1）5'端非编码区,牛冠状病毒（BCV）N pro基因和牛轮状病毒（BRV）VP6基因的保守基因序列设计、合成并试验筛选了四对有效的特异性引物和探针。进一步利用含4种病毒目的片段的重组质粒,对引物和探针的浓度以及反应条件进行了优化,建立了Real-time RT-PCR标准曲线,并对四重Real-time PCR方法的特异性、敏感性、重复性和各种临床样本的适用性进行了评价。结果显示：Real-time RT-PCR最适退火温度和时间分别为50.0℃和45 s,BAstV、BVDV-1、BCV和BRV的引物浓度分别为300、300、400和500 nmol·L^-1,探针浓度分别为250、150、100和300 nmol·L^-1。对BVDV-1、BCV和BRV的最低检测限均为10²copies·μL^-1,对BAstV的最低检测限为10³ copies·μL^-1,具有良好的特异性和重复性。该方法对临床采集的粪样的阳性检出率高于PCR方法。上述结果表明,建立的四重Real-time RT-PCR方法可以用于犊牛腹泻常见病原BAstV、BVDV-1、BCV和BRV的快速鉴别诊断。     

牛病毒性腹泻病毒、大肠杆菌和奇异变形杆菌混合感染致犊牛腹泻的研究

为确定甘肃省临夏州某奶牛场犊牛腹泻的病因,并提供合适的治疗方案和防控措施,试验采集该牛场13头腹泻犊牛的粪便和血清,通过胶体金技术、ELISA方法、细菌分离鉴定、Kirby-Bauer法分别进行病毒病原学检测、病毒血清学抗体检测、病原菌鉴定和药物敏感性试验。病毒学检测结果显示,13份粪样中未检测出牛轮状病毒（BRV）、牛冠状病毒（BCV）的抗原,牛病毒性腹泻病毒（BVDV）抗原阳性率为23.08%（3/13）;未检出BRV和BCV的抗体,BVDV血清学抗体阳性率为38.46%（5/13）。病原菌检测结果显示,13份粪便样品中,分离出13株大肠杆菌和7株奇异变形杆菌。药敏试验表明,分离的大肠杆菌和奇异变形杆菌对20种常规药物均产生了不同程度的耐药,且无对两种细菌均有效的药物。此次犊牛腹泻是由BVDV、大肠杆菌、奇异变形杆菌混合感染引起的,且大肠杆菌和奇异变形杆菌的耐药现象严重,本试验结果为该牛场进一步治疗此次的犊牛腹泻病提供了合理有效的依据。     

川西北牦牛3种病毒性腹泻病血清学调查

The objective of this study was to investigate the epidemic of three viral diarrhea diseases of yaks in northwest Sichuan province and provide certain scientific basis for controlling this kind of disease. 1070 yak serum samples from 8 counties of Aba state in northwest Sichuan province were detected by enzyme-linked immunosorbent assay (ELISA) to investigate prevalence of BVDV, BCV and BRV. The results showed that the average positive rates of BVDV, BCV and BRV antibody were 44.3%, 84.1% and 94.4%, respectively. The BVDV, BCV and BRV of yaks were widespread in northwest Sichuan province, further comprehensive prevention and control measures of viral diarrhea diseases should be strengthened in this region.     

北京地区规模化奶牛场三种病毒性腹泻病的血清学调查

为了解近年北京地区奶牛腹泻性疾病的流行情况,采用酶联免疫吸附试验(ELISA)对北京地区密云、怀柔和昌平3个区县的未免疫接种牛病毒性腹泻病毒(Bovine viral diarrhea virus,BVDV)、牛冠状病毒(Bovine coronavirus,BCV)和牛轮状病毒(Bovine rotavirus,BRV)疫苗的31个规模化奶牛场的1 650份血清样品进行了BVDV、BCV、BRV感染抗体检测。结果显示,BVDV抗体平均阳性率为48.2%,BCV抗体平均阳性率为57.2%,BRV抗体平均阳性率为52.2%,BVDV、BCV及BRV感染在密云、怀柔和昌平3个区县的牛群中普遍存在,需进一步加强奶牛腹泻性疾病的综合防控。     

河北省唐山市奶犊牛病毒性腹泻流行病学调查

试验旨在掌握河北省唐山市13个县（市、区）奶牛场奶犊牛病毒性腹泻病原的流行状况,有效防控奶犊牛腹泻。采集唐山市不同地区38个奶牛场腹泻犊牛粪便样品788份,提取腹泻粪便样品中的基因组RNA。根据GenBank公布的牛病毒性腹泻病毒（Bovine viral diarrhea virus,BVDV）E2基因、牛轮状病毒（Bovine rotavirus,BRV）VP6基因、牛冠状病毒（Bovine coronavirus,BCV）N基因序列,利用Primer Premier 5.0软件分别设计特异性引物,采用PCR方法检测粪便样品中这3种基因,利用Excel 2007对不同地区、不同季节和混合感染病原检测结果进行汇总分析。在采样范围内的788份犊牛腹泻粪便样品中,BVDV、BRV和BCV阳性检出率分别为29.82%（235/788）、29.44%（232/788）和18.02%（142/788）;在所有被检地区,滦南县BVDV感染率最高,阳性检出率为45.38%（59/130）,汉沽区BRV和BCV感染率最高,阳性检出率分别为55.00%（22/40）和37.50%（15/40）;从采样季节来看,春季、夏季和秋季BRV感染率最高,阳性检出率分别为27.71%（46/166）、39.58%（114/288）和19.89%（39/196）,冬季则以BVDV感染为主,阳性检出率为52.17%（72/138）;从混合感染情况来看,以BRV＋BCV二重混合感染为主,感染率为8.37%（66/788）。河北省唐山市各地区腹泻犊牛群中均存在BVDV、BRV和BCV感染,以BVDV、BRV单一感染为主。     

A seroepidemiological study of the importance in cow-calf pairs of respiratory and enteric viruses in beef operations from northwestern Quebec.

Serum antibody analyses for bovine herpesvirus type 1 (BHV-1), bovine viral diarrhea virus (BVDV), bovine respiratory syncytial virus (BRSV), bovine coronavirus (BCV), and bovine rotavirus (BRV) were performed on 527 randomly selected cows, before calving, and on 407 three-week-old calves. In cows and calves, BCV and BRV were the most seroprevalent viruses (80% to 100% according to virus and vaccination status). Bovine respiratory syncytial virus was the least seroprevalent in the cows, independent of the vaccination status. In nonvaccinated cows the seroprevalence to BRSV was 36.7%, and 53.5% in cows vaccinated less than two weeks prior to collecting blood, and 67.6% in cows vaccinated two weeks or more prior to blood collection. In their calves, BHV-1 was the least seroprevalent, independent of the vaccination status. The serological status and antibody titers in calves were generally associated with those of the dam. The occurrence of respiratory diseases in the calves was associated with cow and calf serological profiles (BHV-1, BRSV and BCV in the nonvaccinated group, BHV-1, BVDV and BCV in the vaccinated group). The occurrence of diarrhea was not associated with cow and calf serological profiles but was negatively associated with high level calf serum IgG in the nonvaccinated group (odds ratio = 0.73). Bovine coronavirus and BRV were shed by 1.4% and 4.9% of calves in the nonvaccinated group, and by 0% and 9.9% of calves in the vaccinated group, respectively. Bovine rotavirus shedding was associated with fecal diarrheic consistency at the moment of fecal sampling but not with previous occurrence of diarrhea.     

Viral antibodies in bovine fetuses in Argentina

In order to establish the prevalence of viral infections of the bovine fetus in Argentina, a serological survey for antibodies against viral agents currently affecting cattle in this country was conducted. Antibodies against foot-and-mouth disease virus (FMDV), bovine herpesvirus-1 (BHV-1), bovine leukaemia virus (BLV), bovine rotavirus (BRV), bovine coronavirus (BCV), bovine viral diarrhoea virus (BVDV) and parainfluenza-3 (PI-3) were investigated in a total of 315 fetal serum samples. Conventional techniques were used: indirect immunofluorescence (FMDV, BHV-1, BVDv and BCV), radial immunodiffusion (BLV), ELISA (BRV) and haemagglutination inhibition (PI-3). Antibodies against BHV-1, BVDV and PI-3 were detected in samples from fetuses in the second and third trimester of gestation, with a prevalence of 1·21 per cent (two of 165), 2·03 per cent (four of 197) and 5·08 per cent (nine of 177), respectively. Either antibodies or non-antibody factors able to bind to BRV and Bcv antigens were detected with a prevalence of 2·44 per cent (five of 205) and 4·54 per cent (five of 110), respectively. In addition, 14·68 per cent of non-specific inhibitors of PI-3 mediated haemagglutination were found. No seropositives against FMDV and BLV were detected.     

新疆部分规模奶牛场牛病毒性腹泻病的流行情况调查与防控措施

为了解新疆地区部分规模奶牛场牛病毒性腹泻病（BVD）的流行情况,优化防控措施,以达到建设防控净化场的目的,自2020年11月到2021年7月累计采集新疆5 个地区16 个奶牛场共计26 997 份血清、3 843 份犊牛耳组织进行全群普检。通过使用IDEXX公司牛病毒性腹泻病毒（BVDV）抗原检测试剂盒检测及RT-PCR复检结合测序等方法,淘汰阳性牛,同源性分析流行毒株情况。BVDV血清抗原检测结果为：沙湾某奶牛场BVD阳性率为1.63%（38/2 326）;乌鲁木齐某奶牛场BVD阳性率为0.35%（4/1 132）;其余奶牛场均为阴性。犊牛耳组织抗原检测结果为：乌鲁木齐某牛场BVDV阳性率为1.17%（4/342）;其余奶牛场均为阴性。研究结果揭示,奶牛场通过淘汰BVDV阳性牛,调整免疫程序、制定消毒程序等方法,可有效净化BVD。     

牛病毒性腹泻病毒BVDV-JL分离株全基因序列测定与分析

为了解中国农业科学院特产研究所分子生物学重点实验室前期分离的牛病毒性腹泻病毒BVDV-JL毒株完整的基因序列信息,本试验对BVDV-JL F6代毒株进行了完整基因序列测定。利用反转录—聚合酶链式反应(RT-PCR)方法分段扩增了BVDV-JL分离毒株的7段cDNA片段,分别克隆于pMD18-T载体并进行测序。BVDV-JL株基因组序列全长为12276 bp,编码3901个氨基酸。基因组两端为非编码区5'UTR和3'UTR。基因比对及进化树分析结果表明BVDV-JL与BVDV CP7同源性最高,核苷酸同源性为93.2%,归类于BVDV-1b2基因亚型。BVDV-JL是第1个在中国报道的BVDV-1b2亚型毒株。了解BVDV-JL完整基因序列有利于中国BVDV流行病学调查。     

BVDV、BRV和BCoV TaqMan三重RT-qPCR检测方法的建立

为建立牛病毒性腹泻病毒(BVDV)、牛轮状病毒(BRV)和牛冠状病毒(BCoV)的快速检测方法,根据GenBank中登录的BVDV 5'-UTR、BRV NSP5和BCoV N基因序列设计特异性引物和探针,通过优化反应体系和条件,建立了同时检测上述3种病毒的TaqMan三重RT-qPCR方法。该方法仅对BVDV 5'-UTR、BRV NSP5和BCoV N基因扩增呈阳性,而对牛传染性鼻气管炎病毒、牛副流感病毒、魏氏梭菌(A型、B型和D型)、多杀性巴氏杆菌(A型和B型)等犊牛腹泻相关病原扩增均呈阴性;最低检出限为10拷贝/μL;组内和组间变异系数均小于2%。利用本研究建立的TaqMan三重RT-qPCR方法对29份临床样品进行检测,获得BVDV、BRV、BCoV的4种混合感染型,其中BVDV与BCoV的混合感染率最高(27.6%);与已有单重RT-qPCR方法比较,发现两种方法检测BVDV、BRV和BCoV的符合率分别为100%、96.5%、100%。结果表明,本研究建立的TaqMan三重RT-qPCR方法具有特异性强、敏感性高、重复性好、可行性高等优点,可为今后BVDV、BRV和BCoV共感染引起的牛腹泻性疾病的鉴别诊断和流行病学调查提供新技术手段。     

BPIV-3和BVDV双重RT-PCR快速检测方法的建立

参照GenBank中登录的牛副流感病毒3型(BPIV-3)和牛病毒性腹泻病毒(BVDV)全基因序列,分别针对BPIV3特异性NP蛋白保守基因和BVDV保守区段E2基因设计2对引物,经优化反应条件建立了快速鉴别BPIV-3和BVDV的双重RT-PCR诊断方法。最佳扩增条件为94℃30s,56.2℃30s,72℃1min,循环30次;72℃延伸5min,16℃10min;BVDV引物浓度为1.0μmol/L,BPIV-3引物浓度为0.5μmol/L。采用该方法检测BPIV-3和BVDV参考病毒株,能同时扩增出预期为425bp和294bp大小的特异性片段,而扩增牛传染性鼻气管炎病毒、牛合胞体病毒、猪瘟病毒以及牛支原体、致病性大肠埃希菌、多杀性巴氏杆菌A型、化脓隐秘杆菌和鼠伤寒沙门菌等均呈阴性反应。对参考病毒株进行梯度稀释检测,结果证明该方法检测BPIV-3的灵敏度可达10-3 TCID50/0.1mL,而BVDV的灵敏度达102 TCID50/0.1mL。     

牦牛病毒性腹泻／黏膜病研究进展

牛病毒性腹泻／黏膜病（BVD）是由牛病毒性腹泻病毒（BVDV）引起的一种极为复杂,呈多种临床症状类型表现的疾病。目前,该病毒在世界范围内广泛分布,是造成全球乳／肉牛业经济损失的主要病原。本文针对我国牦牛BVD的发病状况进行分析,并对今后牦牛BVD防控进行了展望。     

牦牛病毒性腹泻病毒全基因测序及生物信息学分析

从牦牛(Yak)体内分离出牛病毒性腹泻/黏膜病病毒(BVDV/MDV),参考GenBank中已收录的BVDV-Ⅰ型的全基因组序列,设计了19对引物,通过RT-PCR方法,对牛病毒性腹泻病毒牦牛株进行克隆及测序,得到其全基因组序列(GenBank登录号:JQ799141),序列全长12214 nt,其中5'-UTR长288 nt,3'-UTR长232 nt。将牦牛株BVDV全基因序列与GenBank中登录的其他8株BVDV病毒全基因序列进行同源性比对及系统进化分析,结果表明,牦牛株BVDV与BVDV-Ⅰ型毒株出于同一分支,但与其他8株BVDV毒株全基因序列同源性均不高,有可能属于新的独立基因型或基因亚型,仍需进一步研究证实。     

1株牛病毒性腹泻病毒分离毒株的基因组特征

旨在从宁夏某奶牛群持续感染牛分离牛源牛病毒性腹泻病毒（BVDV）,并解析其基因组特征,为研究我国不同地区BVDV分离株遗传演化规律提供理论依据。利用BVDV抗原检测试剂盒检测宁夏回族自治区银川市某示范区的240头高产奶牛间隔两周的双份抗凝血,筛选持续感染牛,分离血液淋巴细胞制备裂解液接种牛肾细胞（MDBK）,分离鉴定获得BVDV株,克隆测序获得全基因组序列,比较分析其遗传演化关系。从该示范区高产奶牛筛选获得2头持续感染牛,分离获得1株非致细胞病变型BVDV,命名为NX2019/01。测序获得基因组全序列（12 107 nt）,其中ORF长11 703 nt,编码3 898个氨基酸。在基因组水平,NX2019/01株与我国SD-15、ZM-95、XC、LN-1等1m亚型分离株相似性较高（92.17%~93.84%）,但E^rns、E1以及E2基因存在较大差异。示范区同群牛急性感染BVDV时,毒株E2蛋白N端编码区核苷酸突变可导致第9位或第67位氨基酸变异。重组分析表明,NX2019/01株E2基因179—288位核苷酸区段以及ZM-95株E1基因168位—E2基因332位核苷酸区段存在相似的重组信号,可能由主要亲本SD-15株与次要亲本LN-1株重组形成,表明NX2019/01株、ZM-95株在演化进程中与SD-15株以及LN-1株或早期流行的高度相似毒株存在密切关联。本研究从持续感染高产奶牛分离获得了牛源BVDV-1m亚型毒株,在基因组水平厘清了BVDV-1m亚型毒株的进化关系,并首次发现同亚型BVDV毒株基因同源重组,为进一步研究BVDV在我国的演化规律奠定了基础。     

Research Progress on Molecular Biology of Bovine Viral Diarrhea Virus

Bovine viral diarrhea virus (BVDV) is one of the most important pathogenic viruses which mainly causes bovine viral diarrhea disease (BVD). BVDV can not only cause serious clinical symptoms, but also lead to decrease of immunity of livestock and infect other pathogens, resulting in significant increase of morbidity and mortality of sick animals, and causes significant losses to the cattle industry. With the development of molecular biology theory and technology in recent years, the research on BVDV has been deepening, and some new understandings have been made to the molecular biology of the virus. In this paper, the progress of molecular biology of BVDV in recent years is described from three aspects of the composition and function of virus, the epidemic situation of BVDV gene and the genetic and mutation of BVDV gene.     

牛病毒性腹泻病毒的分子生物学研究进展

牛病毒性腹泻病毒（bovine viral diarrhea virus,BVDV）是导致牛腹泻的重要致病病毒之一,BVDV感染不仅能造成严重的临床症状,且可导致患畜的免疫力降低从而感染其他病原,致使患病动物的发病率和死亡率大大增加,给养牛业造成重大的损失。随着近年来分子生物学相关理论及技术不断发展,对于BVDV的研究逐渐深入,人们对该病毒的分子生物学方面有了一些新的了解,作者主要从BVDV的病毒粒子结构组成及功能、国内外的流行情况和BVDV基因的遗传与变异情况3个方面阐述近几年BVDV的分子生物学研究进展。     

Bovine viral diarrhea virus 1 is classified into different subgenotypes depending on the analyzed region within the viral genome

Phylogenetic analyses of bovine viral diarrhea virus (BVDV) were performed based on the nucleotide sequences of the 5' untranslated region (5'-UTR) and E2-coding gene. Thirty-six BVDV detected from naturally infected cattle in the northern region of Japan were divided into three genotypes, BVDV1a, BVDV1b and BVDV2, in a 5'-UTR phylogenetic tree. In a phylogenetic tree constructed from the E2-coding gene, BVDV1c was identified and the viruses classified in BVDV1c were included in BVDV1a in the 5'-UTR phylogenetic tree. Moreover, BVDV1a and BVDV1b in the E2-phylogenetic tree clustered closer together than in the 5'-UTR tree. These results suggested that phylogenetic analysis of the E2 gene was more useful for identification of subgenotypes within BVDV1.     

Outbreak of acute bovine viral diarrhea in Brazilian beef cattle: clinicopathological findings and molecular characterization of a wild-type BVDV strain subtype 1b

When first described in 1946, bovine viral diarrhea (BVD) was characterized as an acute transmissible disease associated with severe leucopenia, high fever, depression, diarrhea, gastrointestinal erosions, and hemorrhages. Recently the severe acute form has been related only to some hypervirulent BVDV-2 strains. This article reports the detection of BVDV-1b associated with an acute and fatal outbreak of BVD in a Brazilian beef cattle herd. Depression, anorexia, watery diarrhea, sialorrhea, and weakness were observed in six steers. One of these animals was evaluated for laboratorial, clinical, and pathological alterations. Laboratory findings were non-specific; clinically, the animal was weak, with dehydration and erosive oral lesions. Pathological alterations were predominant at the tongue, esophagus, and rumen. A RT-PCR assay using primers to partially amplify the 5′ untranslated region (5′UTR) of the BVDV genome was performed and identified BVDV in all clinical samples analyzed. Phylogenetic analysis of BVDV derived from lymph node revealed that this strain was clustered within the BVDV subtype 1b. This differentiating was only possible to be performed by molecular characterization since both clinical presentation and pathologic findings were similar to BVDV-2 infection.