Biomass production and related characters in the core collection of Pisum germplasm

Retention of residue on the soil surface following harvest is an effective method of reducing soil erosion from both wind and water. The pea crop produces small amounts of residue to effectively reduce soil erosion. Severe erosion occurs in pea production areas such as the Palouse Region of the US Pacific Northwest (PNW) when low residue crops such as spring pea or lentil are followed by fall-sown wheat. The current study was conducted to determine the range of total aboveground biomass (TAB), seed yield, and straw (residue) production from the plant identification (PI) accessions that comprise the core collection of Pisum germplasm. In addition, the potential for increasing seed yield and straw production simultaneously was evaluated. Three hundred and ninety PI accessions were screened in the field in 1996 and 1997. The variation for TAB, seed yield and straw production among the PI accessions exceeded that of the controls both years. Seed yield was positively correlated with straw production (r = 0.81, p< 0.01) indicating that seed and straw production can be increased simultaneously through positive selection for both traits. Significant favorable variation is present among accessions in the USDA core collection of Pisum germplasm which could be used to increase both seed yield and total biomass production of adapted breeding lines.     

Diversity analysis of Central Asia and Caucasian lentil (<Emphasis Type="Italic">Lens</Emphasis><Emphasis Type="Italic">culinaris</Emphasis> Medik.) germplasm using SSR fingerprinting

Diversity analysis was performed among 39 cultivated lentil (Lens culinaris Medik.) accessions of Central Asia and Caucasian origin using five highly polymorphic microsatellite markers. A total of 33 alleles determined ranging from 3 to 8 per locus. Estimated gene diversity value for 33 loci was 0.66. Genetic similarity indices among 39 accessions ranged from 0.24 to 1.0. Cluster analysis using the unweighted pair group method with arithmetic mean method classified accessions into six major groups at 0.5 similarity coefficient. More than half accessions from Tajikistan formed large cluster. On the other hand, a few accessions from each country showed unique genotypes. Overall, most of the accessions, except ones with closely related origin, were distinguished by the present high quality DNA fingerprinting. This molecular diversity information gives important basis for conservation strategy in gene bank and exotic germplasm introduction in breeding programs in Central Asia and Caucasian countries.     

Establishment of a core collection for maize germplasm preserved in Chinese National Genebank using geographic distribution and characterization data

Since the 1980s, a large collection of maize has been preserved in the China National Genebank. To facilitate the evaluation and utilization of these valuable germplasm resources, a core collection was established. The collection was firstly divided into two groups, i.e. the landraces and inbred lines. The percentage of the original collection to be included in the core was given as 7% based on a previous study of sampling strategies in maize. Each group was sequentially stratified based on administrative provinces or regions and kernel types, and a clustering method was applied in further stratification. A logarithmic strategy was used to determine the number of entries in the core at each step. The process resulted in the maize core comprising 951 landraces and 242 inbred lines. Shannon-Weaver diversity index and means were used to validate the core. The core can be used effectively in further in-depth research and maize improvement.     

Quantitave evaluation of Ethiopian landraces of lentil (Lens culinaris)

Summary One hundred and fifty-six landrace populations of lentil (Lens culinaris Medikus) collected from 10 provinces in Ethiopia were evaluated for a set of six quantitative traits at three sites contrasting in altitude. Consistent regional differences among landraces were found for time to flower and maturity, 100-seed weight, number of seeds/pod and plant height. The regional differences were clarified by a discriminant analysis based on 100-seed weight, time to flower and plant height. The lentil of the West Highlands was early and short, that of the North Highlands was large-seeded, whereas lentils from the Central Highlands were the least distinctive group. Selection for seed size was the result of local human preferences. Humans were probably also responsible for the lack of adaptive value of plant phenology in relation to altitude. Selection for seed yield at the low and middle elevation sites gave a positive response to selection at both sites. However, selection for yield at the highland site did not give a positive response elsewhere, indicating that adaptation to highland conditions differed from that at lower elevations.     

Diversity of boron-toxicity tolerance in lentil growth and yield

Boron (B) toxicity is increasingly being recognized as a problem in arid areas of West Asia, where lentil is widely grown. This study investigated whether or not: (1) phenotypic variation of B-toxicity tolerance exists at the seedling stage in lentil, (2) such variation persists to affect adult performance, and (3) there is geographical diversity in seedling tolerance. Four experiments were conducted in a greenhouse. Boric acid was added and mixed uniformly into the soil-mix to prepare high-B soil. Experiment I screened 77 lentil lines randomly selected from ICARDA's international nurseries. Visual growth scores and foliar B-toxicity symptom scores were taken 4–5 weeks after sowing, and used as an indicator for B-toxicity tolerance. In Experiments II and III, four selected lines were studied beyond the seedling stage. In Experiment IV, 231 lentil accessions from seven different countries/regions of the world were screened. There were highly significant differences between the 77 lines in B-toxicity tolerance at the seedling stage as indicated by their degree of B-toxicity symptom, and plant growth. The two tolerant and two sensitive selections from Experiment I showed diverse performance up to maturity as reflected by their differences in leaflet loss, dry mass reduction, and seed yield when grown in high-B soil. There were significant differences in B-toxicity tolerance between the 231 accessions. On average, accessions from Afghanistan were the most tolerant, followed by those from India, Iraq, Syria, Europe, Ethiopia, and Nepal.     

A method for establishing a core collection of Saccharum officinarum L. germplasm based on quantitative-morphological data

A technique is proposed for establishing a representative core collection of S. officinarum accessions from the world collection of sugarcane germplasm maintained at the Sugarcane Breeding Institute-Research Centre, Cannanore, India. In the proposed method, the accessions were first sorted based on their relative contributions to the total variability by means of principal component scores based on a set of quantitative characters. Then, the cumulative proportion of their contributions to the total variance was computed. A logistic regression model was fitted to evaluate the functional relationship between the cumulative proportion of variance and the number of accessions. The size of the core set was decided as the inflection point on that fitted curve, i.e., the point beyond which the rate of increase in cumulative proportion of variability contributed by an accession began to decline. A method for eliminating entries with a high degree of similarity from the selected core set is also proposed.     

Effects of crop growth and soil treatments on microbial C,N, and P in dry tropical arable land

We studied the dynamics of microbial C, N, and P in soil cropped with rice (Oryza sativa) and lentils (Lens culinaris) in a dryland farming system. The crop biomass and grain yield were also studied. The microbial biomass and its N and P contents were larger under the lentil than under the rice crop. Microbial nutrients decreased as the crops grew and then increased again. Farmyard manure and NPK fertilizer applications increased the level of microbial nutrients, crop biomass, and grain yield by 35–80%, 55–85%, and 74–86%, respectively. However, these applications had no significant effect on most of the soil physicochemical properties in the short term. The microbial biomass was correlated with the crop biomass and grain yield. The calculated flux of N and P through the microbial biomass ranged from 30–45 and 10–19 kg ha^-1 year^-1, respectively. Cultivation of a cereal crop followed by a leguminous crop sustains higher levels of microbial nutrients and hence greater fertility in impoverished tropical arable soils. The soil microbial biomass appears to contribute significantly to crop productivity by releasing nutrients, and applications of manure, either alone or with fertilizers, promote this effect more strongly than the application of NPK fertilizers alone.     

The evolution of lentil (Lens culinaris Medik.) cultivation in Italy and its effects on the survival of autochthonous populations

At the beginning of the 20th Century Italy was one of the most important producers of lentil in the Mediterranean basin. Presently, this pulse is mainly cultivated in marginal areas of Central and Southern Italy and in some small islands. As a result of the reduced attention devoted to lentil, several autochthonous populations have disappeared together with the traditions related to their cultivation. Moreover, how long the cultivation of those still grown today will continue is unpredictable. Governmental and local associations have a time window for anticipating a possible epoch when to grow these landraces will be no longer profitable. In the last decades the Germplasm Institute of the National Research Council (Bari, Italy) and the Institut für Pflanzengenetik und Kulturpflanzenforschung (Gatersleben, Germany) have collected 63 lentil populations in Italy, presently stored ex situ. The evaluation of this collection has shown the existence of an appreciable morphological, agronomic and genetic diversity that could foster future breeding programmes. It is concluded that there is an urgent need to promote the survival of lentil populations in situ, since this will further support the adaptation and evolution of autochthonous genotypes in their original environments.     

The major Italian landraces of lentil (<Emphasis Type="Italic">Lens culinaris</Emphasis> Medik.): Their molecular diversity and possible origin

The eleven most known landraces from central and southern Italy were analysed using ISSR markers on 15 randomly chosen individuals for each landrace, with the aim of assessing genetic variation within and among landraces and possibly ascertaining their origin and genetic relationships. A total of 164 loci were observed, 128 of which (78.05%) were polymorphic. Gene diversity over all landraces was I = 0.3759. The highest within-landrace diversity was observed in samples from the Apennine ridge and for one Sicilian landrace; on the other hand, samples from the small Sicily islands were less variable. Principal Component Analysis and AMOVA allowed the discrimination of groups of landraces with higher similarity. Analyses indicate that the small Sicily islands landraces are very closely related to one another and seem to be derived from the peninsular material; moreover, they help disclose relationships among geographically close landraces. The knowledge so acquired can, therefore, contribute to elaborate strategies for increasing the economical value of élite landraces and to protect producers from frauds.     

Variability for seed glucosinolates in a germplasm collection of the genus Brassica

A renewed interest in glucosinolates (GSLs) as compounds with biocidal and anticarcinogenic activity demands evaluation of the available variability in germplasm collections. The objective of the present study was to evaluate a germplasm collection of the genus Brassica for total content and profile of seed GSLs. A total of 1708 entries from 20 Brassica species were nondestructively analysed by near-infrared reflectance spectroscopy. The total GSL content and the concentrations of sinigrin, progoitrin, gluconapin, glucoerucin, glucoiberin, and 4-hydroxyglucobrassicin were estimated by means of previously developed calibration equations. One hundred and fifty entries, having either high GSL content or potentially interesting GSL profiles, were selected and further analysed by high-performance liquid chromatography. The collection contained great variability for GSL content and profile. Very high GSL contents (>200 mol g^-1) were measured in accessions of B. montana, B. nigra, and B. oleracea. The greatest intraspecific variability occurred in B. oleracea, where six contrasting GSL profiles were identified. The detected variability might be useful for the development of Brassica crops containing high GSL content and specific GSL profiles.     

Sampling strategy to develop a core collection of Uruguayan maize landraces based on morphological traits

Core collections were suggested to improve germplasmutilization. A core collection is a subset chosen to represent thediversity of a collection with a minimum of redundancies. Becausediversity is distributed between and within groups with differentdegrees of organization, an adequate classification of accessionsinto related groups should be performed prior to the selection of acore collection. Different classification strategies for theUruguayan Maize Collection were compared, and the best one was usedto select a core collection. The following classification strategieswere compared following a multivariate approach using the availablemaize data base: i) racial classification, ii) geographicorigin (south and north of the country), and iii) acombination of kernel type and geographic origin. The third optionwas considered the best classification rule, since it takes intoaccount two points which are closely related to the distribution ofdiversity: genotypic composition and geographic origin. The followingfive groups were identified in the collection: a) pop, b)floury, c) dent, d) southern flint-semiflints, ande) northern flint-semiflints. Eight core collections,each of 90 accessions, were selected, using different strategies toweight the groups in the core and to select the accessions from thegroups. The P, C, and L strategies were used and combined with eitherrandom selection within the group or the Relative Diversity method.Two samples of 90 accessions were obtained at random withoutconsidering the classification. The Relative Diversity methodcombined with the L strategy produced the best core collection, as itretained the highest percentage of the ranges for the 17 variablesincluded in the analysis. On average, 91% of the ranges wereretained in the core, confirming its representativeness.     

Analysis of the contribution of Mesoamerican and Andean gene pools to European common bean (<Emphasis Type="Italic">Phaseolus vulgaris</Emphasis> L.) germplasm and strategies to establish a core collection

Common bean (Phaseolus vulgaris L.) was introduced in Europe from both Mesoamerican and Andean centres of origin. In this study, a collection including 544 accessions from all European regions showed that the Andean phaseolin types ‘T’ (45.6%) and ‘C’ (30.7%) prevailed over the Mesoamerican ones ‘S’ (23.7%), and accessions with cuboid seed shape (34.9%), maroon coat darker colour seed (44.3%), uniform seed colour (69.6%) were the most frequent. European accessions with phaseolin ‘S’ showed a significantly larger average seed size compared to those from America in the same phaseolin class while those presenting ‘T’ and ‘C’ phaseolin did not. This suggests that, during crop expansion in Europe, sampling or selection favoured the large-seeded races within the Mesoamerican ‘S’ gene pool or, possibly, introgression from Andean germplasm did occur. A core collection was developed using sampling approaches based on the information available in the genebank databases and on phaseolin patterns. Four sampling strategies were used: simple random sampling, and three random-stratified samplings, by logarithm of frequency of accessions by country, by European region, and by phaseolin pattern, respectively. Two sampling strategies resulted in core collections significantly different for phaseolin electrophoretic patterns from the whole collection. Stratification by phaseolin patterns increased the frequency of ‘S’ types (‘C’ type = 33%, ‘T’ type = 5.7% and ‘S’ type = 31.3%). The core collections were validated using seven seed characters, and no significant difference was observed in all strategies. This first developed European bean core collection will help to assess the contribution of the two American gene pools to the European germplasm and their relative importance for breeding purposes.     

Residue cover in wheat systems following dry pea and lentil in the Palouse region of Idaho

Crop management practices are needed that increase crop residue groundcover and reduce soil erosion after winter wheat (Triticum aestivum L.) planting in the Palouse region of northern Idaho and eastern Washington. Trials were conducted in 1997 and 1998 at the University of Idaho Kambitsch Research Farm near Genesee, Idaho, using farm scale equipment to evaluate dry pea (Pisum sativum L. subsp. sativum) and lentil (Lens culinaris Medik) residue production and groundcover across cultivars and tillage intensity. After harvest, legume plot areas were prepared for winter wheat seeding using four main plot tillage systems designed to give progressive levels of tillage intensity: no-till (NT), Ripper–Shooter™ (RS), RS plus one cultivation, and RS plus two cultivations. In 1997, the two dry pea cultivars produced significantly greater residue than the lentil cultivars. In 1998, ‘Pro 2100’ dry pea had significantly higher residue production than ‘Columbian’ pea and ‘Crimson’ lentil cultivars. In 1997, initial residue cover was highest with NT, averaging 74% groundcover across legume cultivars. After winter wheat seeding, residue cover declined for all tillage treatments, but was still highest at 40% residue cover under NT. In 1998, residue cover was lower for all tillage treatments across all cultivars than in 1997, but NT still had the highest initial residue cover. Wheat yield was not affected by tillage or previous crop treatments in either year. This study showed that NT and reduced tillage systems can maintain previous crop residue on the surface for soil conservation and subsequent crop yields.     

Menara gardens: a Moroccan olive germplasm collection identified by a SSR locus-based genetic study

The Menara gardens in Marrakech (Morocco), established in the 12th century, comprise more than 2000 olive trees. To assess the genetic diversity within these gardens, we performed SSR analysis of 128 randomly sampled olive trees. Using 15 SSR loci which revealed 70 alleles, we identified 16 distinct genotypes. The analysis of chloroplast DNA polymorphism allowed to identify 2 chlorotypes: COM1 for 2 genotypes and CE1 for all others. Among the 128 trees analysed, Picholine marocaine was the prevalent cultivar represented by 100 trees (78%), the 28 remaining trees being classified into 15 distinct genotypes. However, four genotypes were closely related to Picholine marocaine from which they probably derived through somatic mutations. The genotypic and genetic diversity observed in Menara gardens compared with the genotype diversity from different areas (North and Atlas); these facts support the hypothesis that these gardens have been planted with trees probably originating from different areas of Morocco. Our results point out an important concept for ex situ conservation: the assumption that local Moroccan olive germplasm was empirically, but not purposively, conserved already in Menara gardens.