A multi-species assessment of genetic variability in Nigerian Amaranthus accessions: potential for improving intra- and interspecies hybridization breeding

Amaranthus yields could benefit from our growing understanding of the genetic variability within and among individual species of local germplasm collections. Thirty-seven Amaranthus accessions representing three different species were evaluated for seed yield and yield components across two seasons. The objectives were to characterize the genetic variability of seed yield and its components across species and determine relationships among seed yield and its components by phenotypic correlation. Significant differences (P < 0.01) existed for all the evaluated traits among the accessions. Characters such as seed yield, stem girth and leaf length showed higher heritability estimates in A. cruentus (14) than in A. hypochondriacus (12) and A. dubius (11) accessions. Seed yield was significantly and positively correlated with stem girth and thousand seed weight. However, it was significantly and negatively correlated with number of days to flowering, plant height, leaf number, number of branches. The clustering of the accessions, which was partially in agreement with species grouping, will help in the identification of diverse parents for use in the breeding program. Enormous amount of genetic variability found in seed yield and its components among Nigerian Amaranthus accessions will offer opportunity for grain and leaf yield improvement through breeding.     

Systematics and taxonomic delimitation of vegetable,grain and weed amaranths: a morphological and biochemical approach

Amaranthus is a cosmopolitan genus comprising large number of species with many morphotypes cultivars/accessions having diversified morphological features. The species, morphotypes within Amaranthus are very closely related requiring microclassification even revision in present taxonomic status. Most of the works have been done employing grain Amaranthus and their putative ancestors applying morphological and molecular data. In present study along with morphological features, phenolic compounds (secondary metabolites), isozyme profile of acid phosphatase were applied to get comprehensive reflection of interrelationship and relative closeness among the species, morphotypes/accessions of few vegetable, grain and weed Amaranthus. Both the vegetable and grain Amaranthus are supposed to have originated from respective weed progenitor through occasional outcrossing and gradual domestication. The study strongly vouched the previous interpretations regarding interrelationship of grain Amaranthus and their derivation from their putative progenitor also showed clear separate clustering of vegetable and grain Amaranthus with their close relatives. A sharp congruence in cluster pattern was achieved between morphological dendrogram and cumulative dendrogram computed on morphological and biochemical parameters, which is a rare event in systematics.     

The flavonoid content in leaves and inflorescences of the wild perennial Fagopyrum cymosum complex

The Fagopyrum cymosum complex is a group of wild perennial buckwheats which includes the diploid species F. megaspartanium Q. F. Chen and F. pilus Q. F. Chen as well as the allotetraploid species F. cymosum (Trev.) Meisn. The flavonoid content in leaves and inflorescences of the accessions of the F. cymosum complex native to Guizhou, Yunnan, Sichuan, Hunan, Hubei, and Tibet has been studied by means of the spectrophotometry and high-performance liquid chromatography. The results showed that there are significant differences of flavonoid content among different species, different accessions and different plants. The average flavonoid content of leaves of F. megaspartanium is higher than that of F. pilus and of F. cymosum. The average flavonoid content of inflorescences of F. megaspartanium is higher than that of F. pilus. The results also showed that the flavonoid content in inflorescences was significantly higher than that in leaves, and that they have positive relationships to each other. There is a significant difference of rutin content between leaves and inflorescences, but there is no significant relationship to each other. There is also no significant relationship between leaf rutin contents and leaf flavonoid contents, but significant positive relationship between inflorescence rutin contents and inflorescence flavonoid contents.     

Diversity Analysis of Garlic (Allium sativum L.) Germplasms Available in Nepal Based on Morphological Characters

A total of 179 garlic (Allium sativum L.) accessions were collected from various parts of Nepal in 2000. Each accession was planted in each of a plot of 2.25 m² at the Institute of Agriculture and Animal Science (IAAS) Horticulture farm (225 m asl) and at the Agriculture Research Station, Dailekh (1400 m asl) of Nepal Agriculture Research Council (NARC) in the first week of November 2000. All accessions were characterized for leaf erectness, leaf color, leaf wax, leaf cross section, bulb regularity, bulb skin color, bulb outer scales number, days to emergence, bulbing period, number of green leaves at 135 days after planting, days to maturity, plant height, bulb weight, bulb diameter, number of cloves per bulb, clove diameter and bulb yield. Data were analyzed by using principal component and cluster analysis procedures to reveal three major clusters. Four principal components were identified explaining more than 86% of total variation. Major characters included in the principal components were bulb weight, diameter, yield, number of cloves per bulb, maturity, plant height, number of green leaves at 135 days after planting, and bulbing period. The level of variation found in the collection showed the great potentiality of improving agronomic characters in garlic.     

Pattern of diversity for morphological and alkaloid yield related traits among the periwinkle Catharanthus roseus accessions collected from in and around Indian subcontinent

Thirty two accessions of periwinkle Catharanthus roseus collected from different semitemperate to tropical geographical areas of Indian subcontinent, Madagascar, Singapore and Malaysia were characterized under field conditions for 53 growth, development, morphogenesis and alkaloid yield related characters over a few seasons at Lucknow, India. Large differences were observed among the accessions for each of the characters examined. The differences among the accessions ranged 3, 80 and 15 fold for the alkaloid yield related traits – leaf dry matter yield and leaf vincristine and vinblastine concentration, respectively. Strong correlations were observed between leaf area and leaf yield with leaf alkaloid, root and root alkaloid yields, contents of dimeric alkaloid in leaves with yields of respective alkaloids, leaf number and root alkaloid content with leaf vinblastine yield and leaf vinblastine content with leaf vincristine and vinblastine yields. Multi-variate analyses allowed classification of the accessions into 5 to 7 morphologically and presumably genetically distinct groups. Generally, the accessions coming from tropical agro-climates tended to get separated from those having origins in subtropical to semi-temperate environments. Three clusters were observed to bear complementary characters for possibly cross-parenting high alkaloid yielding transgressive segregants. One of the accessions of C. roseus in which the leaf vincristine content was 5 fold and vinblastine content one and a half fold of the respective all accession means appeared suitable for the domesticated cultivation. It was proposed that accumulation of high amounts of total alkaloids and one or more dimeric alkaloids in leaves of certain accessions may be a reflection of reproductive fitness achieved under the biotic and abiotic stresses imposed on their parent populations, sometime in their evolutionary pathway.     

Morphological and molecular characterization revealed high species level diversity among cultivated,introduced and wild roses (<Emphasis Type="Italic">Rosa</Emphasis> sp.) of western Himalayan region

High level of genetic diversity and morphological variations were observed among and within the different Rosa species studied. The key traits which differentiated the species were nature of plant, habit, shape of prickles, shape of stipules, leaflet shape, type of leaf margin, vestiture of ventral side of leaflet and flower shape, whereas, traits for distinguishing the accessions within a species (as in case of accessions from western Himalayan region) were flower colour, petal number, shape of hip and hip colour. Some of the accessions from western Himalayan region formed out-groups (IHBT-WR-18, IHBT-WR-21, IHBT-WR-31and IHBT-WR-43B) and could not be classified at the species level. High degree of variations among the accessions of R. multiflora group as compared to variations among the accessions of R. moschata, R. brunonii and R. cathayensis, suggests high level of out-breeding in R. multiflora which may contribute to further variations. Desirable variations were observed for flower colour, petal number, lack of prickles, perpetual flowering, large flower diameter and large fruit size which contribute significantly to diversity of the roses and have potential use in breeding programs.     

EFFECTS OF ORGANIC AMENDMENTS APPLICATION ON GRAIN YIELD,LEAF CHLOROPHYLL CONTENT AND SOME MORPHOLOGICAL CHARACTERISTICS IN SOYBEAN CULTIVARS

A field experiment was conducted to evaluate the effect of organic amendments on grain yield, leaf chlorophyll content, and some morphological characteristics of three soybean cultivars in Mazandaran province located at north of Iran in 2006. Chemical fertilizer (75 kg ha^?1 potassium sulfate and triple superphosphate), two levels of municipal solid waste, vermicompost and sewage sludge biosolid (20 and 40 Mg ha^?1) enriched with%50 chemical fertilizers needed by soil were applied to soybean cultivars (‘032’ and ‘033’ promising lines and ‘JK’ cultivar). The experiment was carried out in split plot based on randomized complete block design with three replications. Some important plant characters such as grain yield, leaf chlorophyll content, number of branches, number of nodes on the main stem, length of internodes, stem diameter, first pod height and plant height were determined. Results showed that application of 40 Mg ha^?1 sewage sludge enriched with chemical fertilizers increased plant grain yield and stem diameter and application of 40 Mg ha^?1 vermicompost enriched with half chemical fertilizer increased the number of nodes on the main stem, significantly. The maximum length of internodes, first pod height and plant height were obtained when the 40 Mg ha^?1 sewage sludge and vermicompost enriched with half chemical fertilizer in ‘032’ line was used. Biomass, number of branches, stem diameter, number of nodes on the main stem of soybean cultivars had a positive and significant correlation with grain yield.     

GROWTH,PHOTOSYNTHESIS, CHLOROPHYLL CONTENT AND NUTRIENT PARTITIONING OF KENAF AS INFLUENCED BY DIFFERENT LEVELS OF CARBON

The effects of carbon (C) levels on growth, photosynthesis, chlorophyll content, and nutrient partitioning on five kenaf varieties were investigated. Kenaf plants were grown in pots containing sandy beach ridges interspersed with swales (BRIS) soil. Organic carbon at levels of 0, 10, 20, 30, and 40 t ha^?1, were applied to the pots. The results showed that plant height, stem diameter, leaf number, leaf area, chlorophyll content and photosynthesis rate increased with an increase in carbon levels up to 20 t ha^?1but decreased with additional increase in carbon levels. The proportion of nitrogen in leaves was minimum at 0 and maximum at 20 t ha^?1carbon levels. In stem and roots, proportion of nitrogen (N) decreased after 10 t ha^?1carbon, while in leaves phosphorus (P), potassium (K), calcium (Ca), and magnesium (Mg) increased after 20 t ha^?1. Variety HC2 showed maximum N, P, and K in leaves and total nutrient content.     

The Pacific yam (<Emphasis Type="Italic">Dioscorea nummularia</Emphasis> Lam.), an under-exploited tuber crop from Melanesia

This study aims to explore the potential of Dioscorea nummularia Lam. and to gather information as a prelude to its improvement by plant breeding. After a taxonomic clarification and a review of the botanical data, its geographical areas of origin and distribution are determined. A germplasm survey conducted on nine islands of Vanuatu enabled the collection of 110 accessions corresponding to 84 cultivars. These were grouped into: (1) wild forms under domestication, (2) annual types, (3) perennial-type cultivars of D. nummularia and (4) natural interspecific hybrids with D. alata L. Within each group, remarkable morphological variation exists for stem spininess, leaf shape, emerging leaf colour, tuber shape and tuber flesh colour. Selected accessions examined for ploidy had chromosome numbers ranging from 2n = 3x = 60 to 2n = 6x = 120. Chloroplast counts conducted on stomatal guard cells confirmed the variation in ploidy levels. Eight different male cultivars were studied for pollen fertility, but <5% of the pollen grains appeared to be fertile when stained with acetocarmine. However, profuse flowering and synchrony favour pollination and result in fruit set. All accessions are resistant to anthracnose. Viruses were detected but are morphologically not discernible, with no incidence on yield. Physicochemical analyses of tubers from 16 accessions revealed that D. nummularia and interspecific hybrids have high percentages of dry matter (mean of 33.11%) and starch (82.81%). The Pacific yam could be improved through conventional hybridisation or used for interspecific crosses with related economically important species. Recommendations are made for further research.     

Stem and leaf rust resistance in wild relatives of wheat with D genome (Aegilops spp.)

Resistance to stem rust and leaf rust in five D genome species of wheat viz., 267 accessions of Aegilops tauschii Coss., 39 of Ae. cylindrica Host, 17 of Ae. ventricosa Tausch, 4 of Ae. crassa Boiss. and 8 of Ae. juvenalis (Thell.) Eig were evaluated at adult plant stage. Two hundred and thirty nine (90 %) accessions of Ae. tauschii, 30 (77 %) of Ae. cylindrica, 16 (94 %) of Ae. ventricosa, 3 (75 %) of Ae. crassa Boiss. and 5 (62.5 %) of Ae. juvenalis were resistant to stem rust pathotypes prevalent in South India at Wellington under field condition. Invariably, all the accessions of the five species were resistant to leaf rust pathotypes. Quantitative measurement of disease using area under the disease progress curve revealed the slow progress of disease in the resistant accessions compared to susceptible check (Agra Local). Since all the five species have D genome, it could be concluded that the genes present in D genome might play a vital role in leaf rust resistance, but in case of stem rust resistance wide range of differential response was noticed. Among the species evaluated, Ae. tauschii was exploited to a larger extent, followed by Ae. ventricosa and Ae. cylindrica for leaf and stem rust resistance because of the homology of D genome with hexaploid bread wheat. While, Ae. crassa and Ae. juvenalis could not be utilized so far, possibly due to partial homology which makes the transfer of traits difficult. So, these species have considerable potential as a source of rust resistance and may enhance the existing gene pool of resistance to stem and leaf rusts.     

Switchgrass (Panicum virgatum L.) from North Dakota—a New Bioenergy Crop for the Nemoral Zone of Europe

ABSTRACT

Parallel to the growing interest in switchgrass (Panicum virgatum L.) in southern countries of Europe, there is enhanced interest in knowing about its potential adaptability in the European regions with cool and moderate climates. The objective of this work was to characterize important agricultural parameters of switchgrass originated from North Dakota in order to identify the most valuable accessions for further research, propagation, and breeding in the Nemoral zone of Europe. The selection aimed at evaluating overwintering and productivity of switchgrass, with the ultimate objective of biomass quality improvement. Field trials were carried out in the central lowland of Lithuania during 2012–2014 on 33 germplasm accessions of switchgrass originating from North Dakota. Allthe tested accessions exhibited almost similar overwinter survival rate, i.e., 93.7–96.7%. Significant differences were observed in mean dry matter yields of all the tested accessions harvested once or twice per season (P < 0.05). The higher yielding accessions during both study years were differentiated. The yield potential of these accessions depended on a number of morphological traits, including internode thickness, plant height, panicle length, and leaf and stem weight per tiller (P < 0.05). Ash and mineral composition was associated with the genotype and the year of biomass harvest (P < 0.05). The switchgrass genotypes originating from North Dakota appeared to be adaptable to the European environment with cool and moderate climate and short growing season. The best-performing accessions can serve as a valuable genetic source for future breeding programmes.     

Chromatographic fingerprinting of <Emphasis Type="Italic">Lupinus luteus</Emphasis> L. (Leguminosae) main secondary metabolites: a case of domestication affecting crop variability

Secondary metabolites (SMs), such as alkaloids and raffinose oligosaccharides (RFOs), play important roles in plant physiology. Although alkaloid and RFO phenotypic variation has been reported for yellow lupin (Lupinus luteus L.), most evaluations have used a reduced number of accessions; thus, limiting the understanding of accumulation patterns and variation ranges. The main goal of this research was to assess alkaloid and RFO content in a diverse L. luteus sample to understand possible SM accumulation patterns across this legume species. Eighteen yellow lupin accessions were analyzed using high performance thin layer chromatography to provide insights on seed and leaf RFO and alkaloid phenotypic variation. Co-dominant markers (170) were used to examine genetic relationships among L. luteus accessions and possible accumulation patterns across closely related genotypes. Significant differences were observed for seed and leaf RFOs. Total seed RFO accumulation ranged from 79.738 to 131.079 mg g^?1. Raffinose, stachyose, and verbascose were observed in all genotypes’ seeds, but at different RFO concentrations. Raffinose was the only RFO detected in leaves (2.793–0.4224 mg g^?1). Total alkaloid accumulation ranged from 0.22 to 15.12 and 0.00 to 8.007 mg g^?1 for seeds and leaves, respectively. Lupinine, sparteine, and gramine were observed in seeds and leaves, and showed a wide range of variation. Neighbor-Joining (NJ) analysis showed an apparent pattern of seed alkaloid accumulation, most likely due to domestication events. However, high RFO accumulating accessions were scattered across the NJ tree. Alkaloid and RFO significant phenotypic variation will not only help to understand the roles of these SMs in L. luteus, but also to uncover the genetic basis behind their accumulation.     

Genetic diversity, seed traits and salinity tolerance of Millettia pinnata (L.) Panigrahi, a biodiesel tree

The leguminous tree, Millettia pinnata (pongamia) produces oilseed suitable for biodiesel production. Assessment of oil production and genetic, morphological and physiological traits are required. Collections from the Forest Products Commission in Kununurra, Western Australia were compared with accessions from India, Indonesia, Queensland and the Northern Territory in Australia. Molecular diversity, examined using the internal transcribed spacer region, indicated distinctiveness of genotypes from Java, Indonesia. Seed traits varied across trees with the smallest seeds from Indonesia and the largest from Kununurra. Oil content varied across trees with a minimum of 28 % in an Indonesian accession and the highest of 45 % from Kununurra. Major fatty acids across trees were oleic (51 %), linoleic (19 %), palmitic (11 %) stearic (6 %), linolenic (4.5 %) and behenic (4.5 %) acids. Seed weight and oil content per seed of developing seeds increased with a sigmoid pattern and oleic acid was the major fatty acid throughout seed development. Waterlogging and salinity tolerance were assessed. Four month-old seedlings from Kununurra, Western Australia and India were exposed to: non-saline drained control, saline drained, non-saline waterlogged and saline waterlogged treatments. Seedlings were waterlogging tolerant. Salt, applied in weekly increments of 50 mM, led to reduced survival, height growth rate, leaf number and stomatal conductance and increased concentrations of leaf Na⁺ and Cl^?. Salinity tolerance was 200 mM NaCl under saline drained and 150 mM NaCl under waterlogged conditions. Milletia pinnata diversity could be exploited for selection of superior genotypes for oil production on marginal land.     

Response of okra plants to root and foliar applied boron.

Abstract

The response of okra plants (Hibiscus esculentus) to root‐and foliar‐applied B at 0, 2 and 4 ppm was investigated in solution culture. Root‐B application higher than 2 ppm resulted in severe root burn and toxicity in the plants, whereas foliar‐B application up to 4 ppm produced adequate plant growth. Chlorophyll and carotene content of the leaves, flower number, stem diameter, plant height and dry matter production were drastically reduced at high root‐applied B when compared to the foliar treatments. Significant negative correlation between root‐applied B and plant height, stem diameter, leaf and flower number was established. Except for a significant negative correlation with leaf number, all other growth components were positively correlated with foliar application of B. At 2 ppm B, leaf‐B, ‐P, ‐K and ‐Ca were higher at the root‐B than at the foliar‐B treatments. Foliar application of B was superior to root‐application as was observed in the healthy growth of the okra plant.     

Delimitation of Amaranthus cruentus L. and Amaranthus caudatus L. using micromorphology and AFLP analysis: an application in germplasm identification

The ‘Morelos’ accessions of Amaranthus from Mexico demonstrate taxonomic ambiguity at the basic morphologic level. The main cause is the enormous morphological and genetic variation exhibited by the species in the genus. Although basic morphological criteria can be applied to herbarium specimens or germplasm collections for quick taxonomic identification, the morphological data alone can be misleading. To ascertain the taxonomic identity of the ‘Morelos’ accessions and their hypothesized species affiliation to Amaranthus caudatus or Amaranthus cruentus, we conducted a comparative analysis of phylogenetic relationships among these taxa/accessions using amplified fragment length polymorphism (AFLP) and micromorphology methods. Based on AFLP data, all the controversial ‘Morelos’ accessions can be consistently placed into a single A. cruentus species clade, which is clearly separated from the A. caudatus species clade. The AFLP-based phylogenetic relationship of ‘Morelos’ and delimitation of A. cruentus and A. caudatus are further supported by micromorphology, showing that the combination of these techniques can provide more reliable data for germplasm identification than each method used alone.     

Evaluation of Diversity among North American Accessions of False Indigo (Amorpha fruticosa L.) for Forage and Biomass

False indigo (Amorpha fruticosa L.) is a perennial leguminous shrub native to North America. The species could potentially be used for livestock forage, biomass energy, reclamation of degraded environments, or as green manure. Future work with the species will depend upon knowledge of available accessions. Our objectives were to determine (1) the range of diversity among accessions, (2) the correlations among traits across locations, and (3) the distribution of variation among accessions. We studied 21 accessions grown at two locations and a subset of 15 accessions grown at a third location. We measured 47 morphological, agronomic, and phenological traits. All traits were influenced by accession in at least one location (p < 0.05). The mean dry matter (DM) biomass yield of accessions in August ranged from 53 to 1515 g plant⁻¹ and was correlated across locations. False indigo had a high second-year leaf concentration, averaging 660 g kg⁻¹ DM at one location in August. Forage quality of false indigo leaves was high, with average crude protein (CP), acid detergent fiber (ADF), and neutral detergent fiber (NDF) concentrations in July of 205, 226, and 235 g kg⁻¹, respectively. Accession means of forage quality traits were poorly correlated across locations, indicating that it would be difficult to improve forage quality through selection. Diversity among accessions was often related to geographic origin. The two southern accessions were distinct from all other accessions, indicating that accessions from distant geographic regions will likely contribute valuable diversity to a plant breeding program.     

Morphological patterns in a world collection of <Emphasis Type="Italic">Cleome gynandra</Emphasis>

Cleome gynandra L. is a leafy vegetable native to sub-Saharan Africa and Asia and cultivated on dry areas. The plant plays an important role in the food and nutrition security of local communities. The objective of this study was to illustrate variation and diversity in the Cleome collection held at the World Vegetable Center. In total, 242 accessions were cultivated and morphologically characterized and analyzed. The gynophore and filament, both important organs of the flower, played a key role in taxonomical identification. High morphological variation was detected in traits including plant height, pod length, leaf size, flower color, and earliness. Distinct morphological differentiation was detected between Asian and African accessions. On average, the African accessions were larger, less uniform and later in flowering and seed maturation than the Asian accessions. The results were used to establish a core collection of 49 Cleome accessions. Gaps in the current collection were detected. High within-accessions diversity challenges the existing ex situ conservation system; to maintain diversity, seed should be collected from a large number of plants, both during the collection mission and in ex situ regeneration. The results are relevant for germplasm collection strategies and regeneration protocols for good genebank practices.