Current status of vegetative compatibility groups in fusarium oxysporum

Thirty-eightformae speciales (ff.sp.) ofFusarium oxysporum which have been subjected to vegetative compatibility grouping (VCG) analysis are listed, along with their updated 3-digit numerical codes. The number of VCGs identified within a forma specialis ranges from one (in 11 cases) to 24. Between two and six VCGs were identified in each of 20 ff.spp., whereas seven VCGs or more were identified in the remaining ff.spp. VCGs to which 4-digit numerical codes have been given are listed for 30 ff.spp.     

Efficacy of bacterial antagonists and different commercial products against Fusarium wilt on rocket

Seven experimental trials were carried out to evaluate the efficacy of the bacterial strains Achromobacter xylosoxydans AM1 and Serratia sp. DM1 obtained from suppressive soils and from soilless used rockwool substrates (Pseudomonas putida FC6B, Pseudomonas sp. FC7B, Pseudomonas putida FC8B, Pseudomonas sp. FC9B and Pseudomonas sp. FC24B) against Fusarium wilt on rocket caused by Fusarium oxysporum ff. spp. raphani and conglutinans. Along with these strains, two commercial bioproducts (RootShield—Trichoderma harzianum T22; Cedomon—Pseudomonas chlororaphis MA342) were also tested. Different application strategies such as soil treatment (trials I to VI; 10⁷ and 10⁸ CFU ml⁻¹) and root dipping (trial VII; 10⁸ and 10⁹ CFU ml⁻¹) were performed in a glasshouse in order to test the efficacy of the bacterial strains against Fusarium oxysporum ff. spp. raphani and conglutinans. The lowest disease incidence (16.7%) was observed with the application of Achromobacter sp. AM1, Serratia sp. DM1 at 10⁸ CFU ml⁻¹ and Pseudomonas sp. FC9B at 10⁷ CFU ml⁻¹ against F. oxysporum f. sp. conglutinans (experiment I). Maximum plant biomass (5.0 g/plant) was registered in Serratia sp. DM1 at 10⁸ CFU ml⁻¹ treated plants in trial IV. The trials against F. oxysporum f. sp. raphani (experiment II) showed that the application of Pseudomonas sp. FC7B, P. putida FC8B at 10⁸ CFU ml⁻¹ and P. chlororaphis MA342 at 7.5 × 10⁶ CFU ml⁻¹ significantly reduced disease incidence to values ranging between 87% and 92%. The highest plant biomass was recorded with the application of Achromobacter sp. AM1 and P. putida FC6B at 10⁷ CFU ml⁻¹ (3.9 to 4.2 g) carried out 7 days before the artificial inoculation of the pathogens (trial IV). The present study showed the potential biocontrol activity of the bacterial strains Achromobacter sp. AM1, Serratia sp. DM1 and Pseudomonas sp. FC9B against F. oxysporum f. sp. conglutinans and of Pseudomonas sp. FC7B, P. putida FC8B, P. chlororaphis MA342, Achromobacter sp. AM1 and P. putida FC6B against F. oxysporum f. sp. raphani. Growth-promoting activity of biocontrol bacteria used during the trials was observed.     

Effects of agrochemical residues on four spider taxa: Laboratory methods for pesticide tests with web-building spiders

The susceptibility of web-building and hunting spiders from the tropics (Panama), Europe (F.R. of Germany) and the Middle East (Israel) to 30 pesticides (16 insecticides, 4 acaricides, 1 herbicide, 9 fungicides) was determined. Laboratory test methods for juvenile and adult web-building spiders are described.Philodromus sp. (hunting spider), was completely resistant to all substances;Argiope sp. (web-building spider),Linyphia sp. (web-building spider) andChiracanthium sp. (hunting spider) showed medium to high susceptibility. Insecticides affected spiders in a wide range of responses: from no mortality (most compounds of biological origin) and medium mortality (pyrethrin compounds, organophosphorus and carbamate compounds), to high mortality (cyclo compounds). To both groups of spiders (the hunting and web-building), most acaricides were highly toxic, whereas herbicides and fungicides were nontoxic.     

Genes responsible for coronatine synthesis in <Emphasis Type="Italic">Pseudomonas syringae</Emphasis> present in the genome of soft rot bacteria

Primers for the PCR amplification of homologous genes encoding polyketide coronafacic acid and coronafacic ligase in the cells of Pectobacterium atrosepticum SCRI1043 (BX950851) were developed to study the presence of these genes in the genome of Pectobacterium sp. and Dickeya sp. Coronafacic ligase catalyses the formation of coronatine from polyketide coronafacic acid and coronamic acid. Coronatine is a toxin produced by Pseudomonas syringae and is one of the major virulence factors in this bacterium. This study using several strains of P. atrosepticum, P. carotovorum subsp. carotovorum and Dickeya sp. isolated in different countries, indicated that all strains of P. atrosepticum possess genes coding coronafacic acid (cfa gene cluster) and coronafacic ligase (cfl). However, these genes were present only in the genome of five out of 50 tested P. carotovorum subsp. carotovorum strains and two out of 34 strains of Dickeya sp. tested. The PCR products homologous to the sequence of cfa7 and cfl gene fragments were sequenced in order to check the level of homology between genes of P. atrosepticum, P. carotovorum subsp. carotovorum and Dickeya sp. The sequences of the gene fragments amplified from all P. atrosepticum strains were almost identical (100% and 99.97%, respectively). The homology of the sequences obtained for P. atrosepticum and sequences of five P. carotovorum subsp. carotovorum and two Dickeya sp. was lower, between 89.69% to 95.00% for the cfl gene fragment, and about 94% for the cfa7 gene fragment.     

Fusarium Redolens f.sp asparagi, Causal Agent of Asparagus Root Rot, Crown Rot and Spear Rot

Two Fusarium species, F. oxysporum f.sp. asparagi and F. proliferatum, are known to be involved in the root and crown rot complex of asparagus. We have investigated reports on the involvement of F. redolens, a third species, which until recently was considered conspecific with F. oxysporum because of morphological similarities. RFLP analysis of the rDNA internal transcribed spacer region and AFLP fingerprinting identified eight strains from asparagus unambiguously as F. redolens. Four of these were tested and found to be pathogenic to asparagus either in this study (two strains) or in a previous one in which they were classified as F. oxysporum (three strains). Disease symptoms and disease development were the same as with F. oxysporum f.sp. asparagi and F. proliferatum. Present data and literature reports identify F. redolens as a host-specific pathogen involved in root, crown and spear rot of asparagus. The pathogen is formally classified as F. redolens Wollenw. f.sp. asparagi Baayen.     

Two new species of egg parasitoids (hymenoptera: Encyrtidae) of wood-boring beetle pests from China

Oobius agrili sp.n. andAvetianella xystrocerae sp.n. (Hymenoptera: Encyrtidae) are described from China. Morphological characters of the new species are illustrated.O. agrili is an egg parasitoid of the emerald ash borerAgrilus planipennis Fairmaire (Coleoptera: Buprestidae) andA. xystrocerae is an egg parasitoid of the wood borerXystrocera globosa (Olivier) (Coleoptera: Cerambycidae). The two new species are potential biocontrol agents of economically important pest insects. The type specimens are deposited in the Institute of Zoology, Chinese Academy of Sciences, Beijing (IZCAS). http://www.phytoparasitica.org posting May 17, 2005.     

Natural occurrence of and inoculation experiments withConidiobolus coronatus andConidiobolus sp. in glasshouse populations ofBemisia tabaci

Bemisia tabaci (Gennadius), the sweetpotato whitefly, has only one known entomophthoralean pathogen,Erynia radicans (Entomophthoraceae). Two new pathogens have been isolated recently from a glasshouse population of this pest:Conidiobolus coronatus and another, undescribed species ofConidiobolus (Entomophthorales: Ancylistaceae). Artificial inoculation experiments revealed that eggs ofB. tabaci are practically immune to infection by either species. Second-instar larvae are highly resistant, only high doses of conidia causing between <1% and 4.6% mortality. Adults were found to be much more susceptible. Doses of 60 conidia/mm² ofC. coronatus caused average mortalities ofca 95%. The maximum mortality of adults caused byConidiobolus sp. was much lower,ca 30%, at a dose of 210 conidia/mm². The incubation period (inoculation to death) for both species, under our experimental conditions, is very short: 18–24 h forC. coronatus and 30 h forConidiobolus sp. Both fungi produced loricoconidia (conidia metamorphosed into resting spores) on cotton leaves and other dry surfaces. This ability allowedConidiobolus sp. to remain viable for 17–21 days on cotton leaves, in glasshouse conditions and in the absence of hosts, whileC. coronatus persisted for 10–14 days.     

First report of Rhizomonas sp. causing corky root of lettuce in Europe

Typical symptoms of corky root were observed on iceberg lettuce (Lactuca sativa L.) in the Netherlands and England, on prickly lettuce (Lactuca serriola L.) in Spain, and on sowthistle (Sonchus oleraceus L.) in Greece. Slow-growing bacteria with similar colonies as strains ofRhizomonas suberifaciens or otherRhizomonas species were isolated from soil surrounding plants with corky root symptoms using lettuce seedlings as bait. Crude lysate from all strains was tested for DNA homology with DNA fromR. suberifaciens strain CA1 (R. sub. CA1) andRhizomonas sp. strain WI4 (R. sp. WI4). Strains that had homology values higher than that ofR. sp. WI4 orR. sub. CA1 were tested for pathogenicity on 1-wk-old lettuce seedlings, cv. Salinas, Two strains from the Netherlands induced typical symptoms of corky root on lettuce. These strains tested negative with monoclonal antibody MAb-Rs1 specific forRhizomonas suberifaciens in an enzyme-linked immunosorbent assay (ELISA). They had low DNA homology withR. sub. CA1 (4–9%) and low to moderate DNA homology withR. sp. WI4 (4–17%). Some nonpathogenic strains had moderate to high levels of DNA homology withR. sub. CA1 orR. sp. WI4 (19–84%). All strains had fatty acid profiles similar to those ofRhizomonas species. This is the first report ofRhizomonas sp. causing corky root of lettuce in Europe.     

Fungal suppression of resistance against inappropriate Blumeria graminis formae speciales in barley,oat and wheat

When barley, wheat or oat leaf epidermal cells were attacked by their appropriate forma specialis (f.sp.) of Blumeria graminis DC. Speer (f.sp. hordei, tritici and avenae, respectively), many attempted penetrations succeeded, functional haustoria were formed and very few plant cells died. When attacked by either of the two possible inappropriate ff.spp., penetration attempts failed in association with papilla deposition by epidermal cells, attacked cells died, or if visible haustoria were formed the plant cell died very soon afterwards. Double inoculation experiments were performed where each cereal species was first attacked by its appropriate f.sp., as inducer, and later by the different ff.spp. as challenger. Infection by the appropriate inducer profoundly affected cellular responses to challenger attack. Suppression of defensive responses was dramatic within epidermal cells containing the inducer haustorium, evident to some extent in adjacent cells, but undetectable at two cells distance. Suppression of penetration resistance allowed most challenger attacks, even by inappropriate ff.spp., to form a haustorium. Furthermore, death of penetrated epidermal cells was also suppressed so that haustoria of the inappropriate ff.spp. functioned to support colony development. In oat, delayed epidermal cell death prevented full colony development by inappropriate ff.spp., but in barley and wheat, no cell death was apparent by four days after inoculation and colonies of the inappropriate ff.spp. produced extensive hyphae, secondary haustoria and conidial chains.     

Aloe ring spot,a new disease of aloe caused by <Emphasis Type="Italic">Haematonectria haematococca</Emphasis> (Berk. &; Broome) Samuels &; Nirenberg (anamorph: <Emphasis Type="Italic">Fusarium</Emphasis> sp.)

A ring spot disease of Aloe vera was found on leaves of potted seedlings of Aloe vera in Hachijojima and Chichijima Islands, Tokyo. From tissue of ring spot lesions, a fungus producing Fusarium-type conidia was consistently isolated. After 1 month, reddish perithecia of nectriaceous fungus had formed on the colonies of this isolate on PDA. These nectriaceous and Fusarium fungi were identified as Haematonectria haematococca and Fusarium sp., respectively. From a single ascospore isolation, the former was confirmed to be the teleomorph of the Fusarium sp. Typical ring spot lesions were reproduced by artificial inoculations using single ascospore and single conidium isolates. Inoculations of five species of genus Aloe revealed that they were highly susceptible except for A. arborescens. This is the first report of a disease on Aloe caused by H. haematococca (anamorph: Fusarium sp.) in Japan, and it was named aloe ring spot.     

Anthracnose of Christmas rose caused by <Emphasis Type="Italic">Colletotrichum</Emphasis> sp.

Leaf spots were found on Christmas rose (Helleborus niger) in Yamagata Prefecture, Japan, in October 2006. The morphology of the causal fungus was very close to that of Colletotrichum truncatum. Classifying the species from the sequences of the internal transcribed spacer regions of ribosomal DNA was inconclusive, and the isolates were identified only as Colletotrichum sp. Artificial inoculation confirmed the pathogenicity of isolates to the host plant and some legumes. We propose the name anthracnose of Christmas rose for this disease by Colletotrichum sp.     

Weed hosts ofVerticillium dahliae in crete: Susceptibility, symptomatology and significance

A survey of common and uncommon weed species usually showing Verticillium wilt symptoms was carried out during 1992–2000 in Crete, Greece.Verticillium dahliae was isolated in 48 out of 182 sampled fields, in which several weed species were grown, from several locations in Oropedio, Lasithi. Altogether, 124 isolates ofV. dahliae were recovered from the vascular stem-tissue of 19 weed species, belonging to ten botanical families. Pathogenicity trials with 13 out of 19 weed species that have never been reported as hosts of the fungus, using for inoculation isolates which originated from the same weed species, resulted in infection of all of them, showing various disease symptoms. Seven weed species (Anthemis melanolepis, Cardaria draba, Convolvulus arvensis, Erodium sp.,Euphorbia helioscopia, Helminthotheca echioides andSinapis alba) are new hosts worldwide, and six additional species (Euphorbia sp.,Lactuca serriola, Raphanus raphanistrum, Sinapis arvensis, Sonchus oleraceus andTrifolium sp.) are new hosts for Greece. The most susceptible (isolation frequency: 27.9–52.8%, moderate disease severity) species were:Capsella bursa-pastoris, C. draba, Chenopodium album, Senecio vulgaris andSolanum nigrum. Less susceptible (isolation frequency: 4.8–17.8%, slight disease severity) were:Amaranthus sp.,A. melanolepis, C. arvensis, Erodium sp.,Euphorbia sp.,E. helioscopia, H. echioides, L. serriola, Malva sylvestris, R. raphanistrum, S. alba, S. arvensis, S. oleraceus andTrifolium sp. Some species —C. draba, C. album, L. serriola andS. nigrum L. — that usually showed external and vascular wilt symptoms, occasionally exhibited only reduced growth. Visible symptoms under natural field conditions in all 13 weed species that had never been reported as hosts ofV. dahliae were similar to those observed after their artificial inoculation. The fungus was not isolated fromFoeniculum vulgare ssp.piperitum, Oxalis corniculata andStellaria media, among other species. http://www.phytoparasitica.org posting Sept. 18, 2002.     

Vegetative Compatibility Grouping of Fusarium oxysporum f. sp. gladioli from Saffron

Fusarium corm rot of saffron (Crocus sativus L.), incited by Fusarium oxysporum f. sp. gladioli, causes severe yield losses in Italy. Major symptoms during flowering (October–November) include yellowing and wilting of shoots, basal stem rot and corm rot. Sixty-four isolates of F. oxysporum f. sp. gladioli, obtained from infected saffron crops located in Italy (Abruzzi, Tuscany and Umbria) and in Spain, were characterized by pathogenicity and vegetative compatibility. Chlorate-resistant, nitrate-nonutilizing (nit) mutants were used to determine vegetative compatibility among the isolates of the pathogen with the aim of examining the genetic relatedness among populations from different locations. All the isolates belonged to vegetative compatibility group 0340. Since saffron shares susceptibility to F. oxysporum f. sp. gladioli with other ornamental plants of the Iridaceae (Crocus, Gladiolus, Iris and Ixia), it is likely that a clone of the pathogen (VCG 0340) was introduced with other hosts and is responsible for the disease outbreak observed on saffron in Italy. Alternatively, or additionally, the clone of F. oxysporum f. sp. gladioli causing disease on saffron in other countries may have spread to the saffron fields in Italy through the import and dispersal of infested propagation material.     

DNA sequence analysis of ribosomal ITS region 1 of Phytophthora vignae f. sp. adzukicola, the pathogen that causes stem rot of adzuki bean

Sequences of the internal transcribed spacer (ITS) region 1 were used to examine the phylogenetic relationships among races of 19 isolates of Phytophthora vignae f. sp. adzukicola and between this forma specialis and three isolates of the closely related P. vignae f. sp. vignae. The ITS 1 sequences were highly conserved (> 98.7% similarity) among representatives of both formae speciales groups. The results of this study indicate that P. vignae is a monophyletic group. The nucleotide sequence data reported are available in the DDBJ/EMBL/GenBank databases under the accession nos. AB120062–AB120080 and AB120122     

凸脐蠕孢菌玉米、高粱专化型的细胞壁降解酶活性及基因表达分析

为探明玉米专化型和高粱专化型凸脐蠕孢菌的细胞壁降解酶在致病过程中的作用,采用酶活性检测方法测定了2种专化型的细胞壁降解酶活性,并检测了相关基因的表达。结果表明:高粱专化型凸脐蠕孢菌的聚甲基半乳糖醛酸酶(PMG)活性为115.84 U/mg,略高于玉米专化型;玉米专化型的多聚半乳糖醛酸酶(PG)和纤维素酶(Cx)的活性分别为151.76 U/mg和168.53 U/mg,略高于高粱专化型;且同一种专化型菌株的细胞壁降解酶活性存在差异。2种专化型的细胞壁降解酶基因表达量存在差异,Cx基因在2种专化型互作过程中均随病程的延长而大幅度上调表达;高粱专化型的PG基因随病程的延长大幅度上调表达,而玉米专化型的PG基因随病程的延长上调表达量有所下降;高粱专化型的PMG基因随病程的延长大幅度上调表达,而玉米专化型的PMG基因随病程的延长下调表达。推测产酶能力、基因表达和基因时间表达的差异可能是引起凸脐蠕孢菌专化型致病专化性的诱因之一。     

Identity and pathogenicity of Rhizoctonia spp. associated with bare patch disease of cereals at a field site in Western Australia

Roots of seedlings of wheat and barley affected by bare patch disease at a field site in Western Australia were assessed for root damage and plated to isolate fungi. The patches were variable in shape and size and had the most severely affected plants in the centre. Of the 165 isolates ofRhizoctonia spp. obtained, 90% were multinucleate and 10% binucleate, the former being predominant in the plants at the centre of the patch. The relative frequency of binucleate isolates increased with proximity to the periphery. The increase in activity of avirulent binucleate isolates towards the periphery of the patch may be related to the sharp and abrupt edging of the patch. A variety of other species of fungi such asFusarium spp.,Mortierella spp.,Bipolaris sorokiniana, Pythium sp. andTrichoderma sp. were encountered within the patches. The multinucleate isolates belonging to anastomosis groups (Ag) 2–1, 2–2 and 8 (Thanatephorus cucumeris) were most pathogenic to wheat. The binucleate isolates of Ag C, D, E, and K (Ceratobasidium sp.) were less pathogenic. It is suggested that the bare patch disease is caused by a complex of root rot fungi composed of one or more anastomosis groups ofRhizoctonia spp. and other associated fungi.Samenvatting Van kiemplanten van tarwe en gerst, afkomstig van een met kale-plekkenziekte besmet perceel in West Australië werd de mate van wortelbeschadiging bepaald en werden schimmels uit de wortels geïsoleerd. De plekken waren verschillend van vorm en afmeting; de zwaarst aangetaste planten werden in het centrum ervan aangetroffen. Van de 165 verkregen isolaten vanRhizoctonia spp. was 90% meerkernig en 10% tweekernig. De meerkernige overheersten in de centra van de plekken. Relatief gezien nam het aantal tweekernige isolaten toe naarmate de herkomst dichter bij de periferie van de plekken was. De scherpe begrenzing van de ziekte aan de randen van de plekken zou in verband kunnen staan met het toenemen van de activiteit van de avirulente tweekernige isolaten in de nabijheid van de periferie van de plekken. Een aantal andere schimmels, zoalsFusarium spp.,Mortierella spp.,Bipolaris sorokiniana, Pythium sp. enTrichoderma sp. werd eveneens in de plekken aangetroffen. De meerkernige isolaten die tot de anastomosegroepen Ag 2–1, 2–2 en 8 (Thanatephorus cucumeris) behoren, waren voor tarwe het meest pathogeen. De tweekernige isolaten van de anastomosegroepen Ag C, D, E en K (Ceratobasidium sp.) waren minder pathogeen. Gesuggereerd wordt, dat de kale-plekkenziekte veroorzaakt wordt door een complex van verschillende wortelschimmels, die behoren tot een of meer anastomosegroepen vanR. solani en andere daarmee geassocieerde schimmels.     

PCR-based differentiation of Fusarium oxysporum ff. sp. lycopersici and radicis-lycopersici and races of F. oxysporum f. sp. lycopersici

The pathogenic type (form and race) of Fusarium oxysporum, which generates wilt symptoms on tomato, was rapidly identified with a polymerase chain reaction (PCR)-based technique. We compared the partial nucleotide sequences of endo polygalacturonase (pg1) and exo polygalacturonase (pgx4) genes from isolates of F. oxysporum ff. sp. lycopersici (FOL) and radicis-lycopersici (FORL) from Japan and designed specific primer sets (uni, sp13, sp23, and sprl) based on the nucleotide differences that appeared among the pathogenic types. PCR with the uni primer set amplified a 670∼672-bp fragment from all isolates of FOL and FORL. With the sp13 primer set, an amplicon of 445 bp was obtained only from isolates of FOL race 1 and 3. With the sp23 primer set, a 518-bp fragment was obtained from isolates of FOL race 2 and 3. The sprl primer set yielded a 947-bp fragment from isolates of FORL, but not from FOL. A combination of amplifications with these primer sets effectively differentiated the pathogenic types of F. oxysporum in tomato.     

Bionomics and importance of two species ofChaetocnema in rice yellow mottle virus transmission in lowland rice in Tanzania

Regular samplings were done of two important vectors in farmers’ fields during the 1999/2000 and 2000/01 rice seasons at crop stages susceptible to rice yellow mottle virus (RYMV) on a traditional rice variety (‘Supa’) under rainfed lowland conditions to provide information on the bionomics and importance of these vectors in the disease transmission. The population ofChaetocnema sp. (nr.varicornis Jacoby) (Coleoptera: Chrysomelidae) was significantly higher in hotspot than non-hotspot areas. However, there was no significant difference in theC. pulla Chapuis population between these two areas. In general, theChaetocnema sp. population was higher than that ofC. pulla, and both vectors reached the peak of their population at 63 days after planting. Early planting in the hotspot areas is suggested as a disease management strategy. Both vectors are naturally infective andChaetocnema sp. proved more efficient thanC. pulla in the transmission of RYMV.     

White rust of <Emphasis Type="Italic">Ipomoea</Emphasis> caused by <Emphasis Type="Italic">Albugo ipomoeae-panduratae</Emphasis> and <Emphasis Type="Italic">A. ipomoeae-hardwickii</Emphasis> and their host specificity

In some areas of Japan, yellow spots with white pustules on leaves, stems, petioles, peduncles and calyces were found on Ipomoea nil, I. triloba, I. lacunosa and I. hederacea var. integriuscula. We demonstrated that the diseases on I. nil, I. triloba and I. lacunosa were caused by host-specific strains of Albugo ipomoeae-panduratae and defined three forma speciales of the fungus, respectively, for the three Ipomoea species: “f. sp. nile”, “f. sp. trilobae” and “f. sp. lacunosae”. Because the diseases were new to Japan, we coined the Japanese name “shirosabi-byo”, which means white rust. We also showed that the disease on I. hederacea var. integriuscula was caused by A. ipomoeae-hardwickii. We named this new disease “white rust (shirosabi-byo in Japanese)”.     

Allelism of theFcu-1 andFoc genes conferring resistance to fusarium wilt in cucumber

The inheritance of resistance toFusarium oxysporum f.sp.cucumerinum race 1 was determined in the cucumber cv. WIS-248 by analyzing segregation of F₁, F₂, and BC populations of crosses with the susceptible cv. Straight-8. Resistance was conferred by a single dominant gene. In an allelism test, it was proven that theFcu-1 gene, which confers resistance toF. oxysporum f.sp.cucumerinum races 1 and 2 in cucumber cv. SMR-18 and theFoc gene, which confers resistance toF. oxysporum f.sp.cucumerinum race 2 in cucumber cv. WIS-248, are indistinguishable.